Query 002884
Match_columns 870
No_of_seqs 669 out of 3643
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 05:20:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002884.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002884hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vl5_A Unknown conserved prote 99.6 1.2E-14 4.2E-19 150.1 17.0 145 466-614 36-186 (260)
2 4hg2_A Methyltransferase type 99.6 3.8E-15 1.3E-19 157.1 10.6 94 468-569 40-135 (257)
3 3bus_A REBM, methyltransferase 99.6 2.8E-14 9.5E-19 148.0 16.1 146 466-614 60-212 (273)
4 1xxl_A YCGJ protein; structura 99.5 9E-14 3.1E-18 142.6 17.9 145 466-614 20-170 (239)
5 4gek_A TRNA (CMO5U34)-methyltr 99.5 3.5E-14 1.2E-18 149.9 15.1 103 465-571 68-180 (261)
6 3kkz_A Uncharacterized protein 99.5 1.5E-13 5.2E-18 142.7 18.3 140 466-614 45-192 (267)
7 3f4k_A Putative methyltransfer 99.5 1.2E-13 4E-18 141.8 17.2 141 466-614 45-192 (257)
8 3dlc_A Putative S-adenosyl-L-m 99.5 9E-14 3.1E-18 138.0 15.7 144 469-614 45-199 (219)
9 3bgv_A MRNA CAP guanine-N7 met 99.5 7.7E-16 2.6E-20 164.3 0.7 102 467-569 34-155 (313)
10 1nkv_A Hypothetical protein YJ 99.5 6.1E-14 2.1E-18 143.8 13.6 142 466-614 35-183 (256)
11 2o57_A Putative sarcosine dime 99.5 9.1E-14 3.1E-18 146.4 14.9 143 466-614 81-230 (297)
12 2aot_A HMT, histamine N-methyl 99.5 4.5E-14 1.5E-18 149.4 12.5 147 466-614 51-217 (292)
13 2p7i_A Hypothetical protein; p 99.5 8.9E-14 3E-18 140.5 14.0 98 467-570 42-142 (250)
14 3dli_A Methyltransferase; PSI- 99.5 4.5E-14 1.6E-18 144.4 11.9 135 466-614 40-180 (240)
15 2yqz_A Hypothetical protein TT 99.5 1.5E-13 5.3E-18 140.9 15.3 100 466-568 38-140 (263)
16 3mgg_A Methyltransferase; NYSG 99.5 1.5E-13 5.2E-18 143.0 15.0 147 465-614 35-194 (276)
17 3l8d_A Methyltransferase; stru 99.5 9.8E-14 3.4E-18 140.9 12.9 141 467-614 53-196 (242)
18 3hnr_A Probable methyltransfer 99.5 1.7E-13 5.7E-18 137.5 14.4 145 467-618 45-201 (220)
19 3vc1_A Geranyl diphosphate 2-C 99.5 1.4E-13 4.7E-18 147.1 14.4 145 466-614 116-265 (312)
20 3ujc_A Phosphoethanolamine N-m 99.5 5.5E-14 1.9E-18 144.2 10.4 144 466-614 54-202 (266)
21 3h2b_A SAM-dependent methyltra 99.5 1.4E-13 4.9E-18 136.5 12.1 133 468-615 42-179 (203)
22 1xtp_A LMAJ004091AAA; SGPP, st 99.5 6.1E-14 2.1E-18 143.4 9.2 139 466-615 92-235 (254)
23 3ccf_A Cyclopropane-fatty-acyl 99.5 2.7E-13 9.3E-18 141.9 14.1 141 466-614 56-206 (279)
24 2ex4_A Adrenal gland protein A 99.5 1.5E-13 5.1E-18 140.7 11.6 138 467-614 79-221 (241)
25 3sm3_A SAM-dependent methyltra 99.5 4.3E-13 1.5E-17 134.8 14.0 104 467-572 30-144 (235)
26 3gu3_A Methyltransferase; alph 99.5 6.9E-13 2.4E-17 139.8 16.0 115 451-571 9-128 (284)
27 3dh0_A SAM dependent methyltra 99.5 6.7E-13 2.3E-17 133.0 14.8 136 466-614 36-177 (219)
28 4htf_A S-adenosylmethionine-de 99.4 4.1E-13 1.4E-17 140.8 13.6 102 467-570 68-174 (285)
29 3dtn_A Putative methyltransfer 99.4 5.5E-13 1.9E-17 135.2 13.6 102 465-570 42-149 (234)
30 2p35_A Trans-aconitate 2-methy 99.4 8E-13 2.7E-17 135.5 14.9 98 466-570 32-133 (259)
31 3g5t_A Trans-aconitate 3-methy 99.4 9.4E-13 3.2E-17 139.4 15.6 100 467-568 36-148 (299)
32 3hem_A Cyclopropane-fatty-acyl 99.4 1.6E-12 5.6E-17 137.7 17.0 100 466-570 71-184 (302)
33 4fsd_A Arsenic methyltransfera 99.4 4.4E-13 1.5E-17 148.1 12.9 166 467-657 83-271 (383)
34 1pjz_A Thiopurine S-methyltran 99.4 1.3E-13 4.4E-18 139.0 7.3 101 467-568 22-139 (203)
35 3jwh_A HEN1; methyltransferase 99.4 1.1E-12 3.8E-17 131.9 13.6 100 467-568 29-140 (217)
36 1vlm_A SAM-dependent methyltra 99.4 1.8E-12 6.2E-17 131.0 15.1 137 468-614 48-184 (219)
37 3ege_A Putative methyltransfer 99.4 3E-13 1E-17 140.6 9.1 108 451-570 22-131 (261)
38 3orh_A Guanidinoacetate N-meth 99.4 3.7E-13 1.3E-17 139.1 9.7 114 449-568 47-169 (236)
39 3g5l_A Putative S-adenosylmeth 99.4 7.3E-13 2.5E-17 136.1 11.8 100 466-569 43-145 (253)
40 2gs9_A Hypothetical protein TT 99.4 1.8E-12 6.3E-17 129.3 14.3 98 467-571 36-134 (211)
41 3e23_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 131.2 12.7 131 467-614 43-178 (211)
42 3ofk_A Nodulation protein S; N 99.4 8.3E-13 2.8E-17 132.3 11.5 102 465-570 49-155 (216)
43 1kpg_A CFA synthase;, cyclopro 99.4 2.7E-12 9.4E-17 134.4 15.8 100 466-570 63-169 (287)
44 2gb4_A Thiopurine S-methyltran 99.4 5.5E-13 1.9E-17 140.0 10.1 102 466-568 67-190 (252)
45 1zx0_A Guanidinoacetate N-meth 99.4 1.5E-12 5.1E-17 133.3 13.1 113 449-568 47-169 (236)
46 3ou2_A SAM-dependent methyltra 99.4 2E-12 6.7E-17 128.7 13.3 99 466-571 45-148 (218)
47 2p8j_A S-adenosylmethionine-de 99.4 1.4E-12 4.8E-17 129.5 11.9 102 466-569 22-128 (209)
48 3jwg_A HEN1, methyltransferase 99.4 1.8E-12 6.2E-17 130.3 12.6 100 467-568 29-140 (219)
49 3mti_A RRNA methylase; SAM-dep 99.4 2.9E-12 9.8E-17 125.6 13.0 104 466-570 21-136 (185)
50 1ve3_A Hypothetical protein PH 99.4 3.4E-12 1.2E-16 128.0 13.9 103 467-570 38-143 (227)
51 2avn_A Ubiquinone/menaquinone 99.4 1.4E-12 4.7E-17 135.4 11.3 98 467-570 54-153 (260)
52 3thr_A Glycine N-methyltransfe 99.4 1.3E-12 4.6E-17 137.0 10.9 117 449-569 43-175 (293)
53 2xvm_A Tellurite resistance pr 99.4 4E-12 1.4E-16 124.7 13.5 101 467-570 32-137 (199)
54 1y8c_A S-adenosylmethionine-de 99.4 2.9E-12 9.8E-17 129.6 12.8 115 451-569 23-142 (246)
55 3i9f_A Putative type 11 methyl 99.4 1.9E-12 6.7E-17 124.8 10.2 96 466-570 16-113 (170)
56 2kw5_A SLR1183 protein; struct 99.4 2.4E-12 8E-17 127.7 11.0 100 467-570 30-132 (202)
57 2vdw_A Vaccinia virus capping 99.4 2.7E-12 9.3E-17 138.1 12.3 101 467-569 48-169 (302)
58 3cc8_A Putative methyltransfer 99.3 2.2E-12 7.4E-17 129.0 10.5 139 466-614 31-181 (230)
59 3e8s_A Putative SAM dependent 99.3 4.3E-12 1.5E-16 126.6 12.3 139 467-614 52-205 (227)
60 2a14_A Indolethylamine N-methy 99.3 1.5E-12 5E-17 136.2 8.9 140 466-614 54-234 (263)
61 3pfg_A N-methyltransferase; N, 99.3 3E-12 1E-16 132.5 11.1 96 467-568 50-150 (263)
62 3ocj_A Putative exported prote 99.3 2.7E-12 9.2E-17 136.6 10.6 101 466-569 117-227 (305)
63 3g2m_A PCZA361.24; SAM-depende 99.3 4.4E-12 1.5E-16 134.3 12.1 100 468-569 83-190 (299)
64 3lcc_A Putative methyl chlorid 99.3 6.6E-12 2.3E-16 127.8 12.8 132 468-614 67-203 (235)
65 1dus_A MJ0882; hypothetical pr 99.3 8.5E-12 2.9E-16 121.1 12.9 103 466-570 51-158 (194)
66 3bkw_A MLL3908 protein, S-aden 99.3 3.2E-12 1.1E-16 129.5 10.0 100 466-569 42-144 (243)
67 3d2l_A SAM-dependent methyltra 99.3 9.4E-12 3.2E-16 126.1 13.1 101 467-569 33-137 (243)
68 2fk8_A Methoxy mycolic acid sy 99.3 1.6E-11 5.6E-16 130.8 15.4 100 466-570 89-195 (318)
69 1wzn_A SAM-dependent methyltra 99.3 1.2E-11 4.3E-16 126.6 13.8 115 452-569 27-145 (252)
70 3p9n_A Possible methyltransfer 99.3 1.4E-11 4.7E-16 121.7 13.4 133 432-569 12-153 (189)
71 4e2x_A TCAB9; kijanose, tetron 99.3 8.1E-13 2.8E-17 146.6 4.8 139 466-614 106-249 (416)
72 3m70_A Tellurite resistance pr 99.3 9.3E-12 3.2E-16 130.5 12.3 100 467-569 120-223 (286)
73 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.2E-11 4E-16 119.5 12.1 98 466-569 24-127 (178)
74 3g07_A 7SK snRNA methylphospha 99.3 1.5E-12 5.1E-17 138.5 6.3 101 467-568 46-219 (292)
75 1ri5_A MRNA capping enzyme; me 99.3 1E-11 3.5E-16 129.7 11.9 102 466-569 63-174 (298)
76 2pxx_A Uncharacterized protein 99.3 7E-12 2.4E-16 124.2 10.1 101 466-569 41-159 (215)
77 3dxy_A TRNA (guanine-N(7)-)-me 99.3 6.1E-12 2.1E-16 129.0 9.8 101 467-569 34-150 (218)
78 2g72_A Phenylethanolamine N-me 99.3 6.6E-12 2.3E-16 132.2 10.1 139 467-614 71-252 (289)
79 3bkx_A SAM-dependent methyltra 99.3 3.3E-11 1.1E-15 125.0 15.1 104 466-571 42-161 (275)
80 3ggd_A SAM-dependent methyltra 99.3 4.2E-12 1.5E-16 129.8 8.1 101 466-570 55-164 (245)
81 3bxo_A N,N-dimethyltransferase 99.3 1.4E-11 4.9E-16 124.4 11.9 97 467-569 40-141 (239)
82 3cgg_A SAM-dependent methyltra 99.3 2.9E-11 9.8E-16 117.5 13.5 99 467-570 46-148 (195)
83 2zfu_A Nucleomethylin, cerebra 99.3 2E-11 6.8E-16 122.3 12.4 112 466-616 66-177 (215)
84 3dmg_A Probable ribosomal RNA 99.3 2.5E-11 8.4E-16 135.1 14.3 103 467-571 233-342 (381)
85 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.9E-11 6.5E-16 124.2 11.6 101 467-569 38-153 (213)
86 1yzh_A TRNA (guanine-N(7)-)-me 99.2 3.8E-11 1.3E-15 121.0 13.3 101 467-569 41-156 (214)
87 4df3_A Fibrillarin-like rRNA/T 99.2 5.6E-12 1.9E-16 131.8 7.3 99 465-569 75-182 (233)
88 2i62_A Nicotinamide N-methyltr 99.2 1.4E-11 4.7E-16 126.5 9.9 140 466-615 55-236 (265)
89 3njr_A Precorrin-6Y methylase; 99.2 7.8E-11 2.7E-15 119.1 15.1 97 466-569 54-154 (204)
90 3grz_A L11 mtase, ribosomal pr 99.2 3.8E-11 1.3E-15 119.6 11.7 117 444-569 39-159 (205)
91 3e05_A Precorrin-6Y C5,15-meth 99.2 1.2E-10 4.2E-15 116.0 15.2 99 466-569 39-142 (204)
92 1nt2_A Fibrillarin-like PRE-rR 99.2 3.6E-11 1.2E-15 122.5 11.0 97 466-569 56-161 (210)
93 3gwz_A MMCR; methyltransferase 99.2 1.6E-10 5.4E-15 126.9 16.4 143 466-614 201-352 (369)
94 3fpf_A Mtnas, putative unchara 99.2 9.6E-11 3.3E-15 126.6 14.2 111 451-569 107-222 (298)
95 3p2e_A 16S rRNA methylase; met 99.2 2.9E-11 9.8E-16 124.6 9.5 143 467-616 24-183 (225)
96 2qe6_A Uncharacterized protein 99.2 1.4E-10 4.9E-15 122.9 15.0 100 467-570 77-197 (274)
97 3eey_A Putative rRNA methylase 99.2 9.2E-11 3.2E-15 115.9 12.5 104 466-570 21-140 (197)
98 3i53_A O-methyltransferase; CO 99.2 9.8E-11 3.4E-15 126.0 13.7 142 467-614 169-317 (332)
99 3mq2_A 16S rRNA methyltransfer 99.2 3.5E-11 1.2E-15 121.0 9.6 103 466-569 26-140 (218)
100 3evz_A Methyltransferase; NYSG 99.2 9.2E-11 3.2E-15 118.7 12.5 102 466-569 54-179 (230)
101 3q7e_A Protein arginine N-meth 99.2 9.2E-11 3.2E-15 128.4 13.0 100 467-568 66-172 (349)
102 2ift_A Putative methylase HI07 99.2 9.4E-11 3.2E-15 117.9 11.8 102 467-571 53-165 (201)
103 1p91_A Ribosomal RNA large sub 99.2 6.4E-11 2.2E-15 122.9 10.6 98 467-578 85-186 (269)
104 2yxd_A Probable cobalt-precorr 99.2 1.3E-10 4.3E-15 112.1 11.9 95 466-569 34-131 (183)
105 1xdz_A Methyltransferase GIDB; 99.2 1.1E-10 3.9E-15 119.9 12.2 96 467-568 70-173 (240)
106 3ckk_A TRNA (guanine-N(7)-)-me 99.2 7.2E-11 2.5E-15 122.5 10.4 102 467-569 46-168 (235)
107 3m33_A Uncharacterized protein 99.2 3.9E-11 1.3E-15 122.1 8.2 88 467-566 48-139 (226)
108 3lbf_A Protein-L-isoaspartate 99.2 1.5E-10 5E-15 115.6 12.1 97 466-570 76-175 (210)
109 2fhp_A Methylase, putative; al 99.2 7.6E-11 2.6E-15 114.7 9.5 132 431-569 12-154 (187)
110 3iv6_A Putative Zn-dependent a 99.2 5.1E-11 1.7E-15 126.5 8.9 99 466-571 44-150 (261)
111 2fyt_A Protein arginine N-meth 99.1 2.2E-10 7.5E-15 125.1 13.1 100 466-567 63-169 (340)
112 4dcm_A Ribosomal RNA large sub 99.1 2.2E-10 7.6E-15 127.1 13.3 101 467-569 222-334 (375)
113 3mcz_A O-methyltransferase; ad 99.1 4.5E-10 1.5E-14 121.5 15.3 144 468-615 180-336 (352)
114 2fpo_A Methylase YHHF; structu 99.1 3.8E-10 1.3E-14 113.5 13.6 100 467-569 54-160 (202)
115 1ws6_A Methyltransferase; stru 99.1 1E-10 3.4E-15 112.0 8.8 130 432-570 11-148 (171)
116 3dp7_A SAM-dependent methyltra 99.1 2.5E-10 8.7E-15 125.0 13.2 144 467-614 179-338 (363)
117 1l3i_A Precorrin-6Y methyltran 99.1 2.9E-10 1E-14 110.1 12.1 98 466-569 32-134 (192)
118 1ej0_A FTSJ; methyltransferase 99.1 9E-11 3.1E-15 111.5 8.3 92 466-569 21-136 (180)
119 3uwp_A Histone-lysine N-methyl 99.1 1.2E-10 4E-15 131.0 9.9 103 466-570 172-289 (438)
120 3opn_A Putative hemolysin; str 99.1 1.6E-11 5.4E-16 127.6 2.7 147 444-614 18-180 (232)
121 2nxc_A L11 mtase, ribosomal pr 99.1 2E-10 6.7E-15 120.1 10.6 97 467-569 120-218 (254)
122 3lpm_A Putative methyltransfer 99.1 3.5E-10 1.2E-14 117.7 12.5 101 467-568 49-175 (259)
123 3hp7_A Hemolysin, putative; st 99.1 3.4E-10 1.1E-14 122.0 12.6 155 445-614 67-228 (291)
124 3mb5_A SAM-dependent methyltra 99.1 2E-10 6.9E-15 118.2 10.2 97 466-569 92-194 (255)
125 2r3s_A Uncharacterized protein 99.1 5.9E-10 2E-14 119.3 14.1 144 466-614 164-319 (335)
126 1qzz_A RDMB, aclacinomycin-10- 99.1 7.4E-10 2.5E-14 120.6 14.8 144 466-614 181-335 (374)
127 3r0q_C Probable protein argini 99.1 4.5E-10 1.6E-14 124.2 13.2 99 466-568 62-168 (376)
128 3gdh_A Trimethylguanosine synt 99.1 1.8E-11 6.1E-16 125.1 1.8 99 467-568 78-180 (241)
129 2ip2_A Probable phenazine-spec 99.1 5.4E-10 1.8E-14 120.0 13.2 140 469-614 169-318 (334)
130 1x19_A CRTF-related protein; m 99.1 7E-10 2.4E-14 120.8 14.3 144 466-614 189-344 (359)
131 3u81_A Catechol O-methyltransf 99.1 3.6E-10 1.2E-14 114.6 11.2 100 467-569 58-170 (221)
132 3htx_A HEN1; HEN1, small RNA m 99.1 9.1E-10 3.1E-14 131.9 16.2 102 467-570 721-835 (950)
133 3q87_B N6 adenine specific DNA 99.1 3.8E-10 1.3E-14 110.5 10.9 91 467-569 23-123 (170)
134 1g6q_1 HnRNP arginine N-methyl 99.1 8.4E-10 2.9E-14 119.7 13.9 113 450-568 25-144 (328)
135 3ntv_A MW1564 protein; rossman 99.1 3.2E-10 1.1E-14 116.3 10.0 99 467-570 71-177 (232)
136 2b3t_A Protein methyltransfera 99.1 1E-09 3.4E-14 115.3 13.9 101 467-568 109-237 (276)
137 1jsx_A Glucose-inhibited divis 99.1 4.4E-10 1.5E-14 111.7 10.6 96 467-569 65-165 (207)
138 3g89_A Ribosomal RNA small sub 99.1 5.8E-10 2E-14 116.7 11.9 97 466-568 79-183 (249)
139 1af7_A Chemotaxis receptor met 99.1 3.4E-10 1.2E-14 120.8 10.2 101 467-568 105-251 (274)
140 2yxe_A Protein-L-isoaspartate 99.1 9.6E-10 3.3E-14 110.1 12.9 97 466-570 76-178 (215)
141 2esr_A Methyltransferase; stru 99.1 1.3E-10 4.6E-15 112.9 6.2 100 467-569 31-138 (177)
142 1yb2_A Hypothetical protein TA 99.0 3.5E-10 1.2E-14 118.9 9.8 99 465-570 108-212 (275)
143 2pjd_A Ribosomal RNA small sub 99.0 2.8E-10 9.6E-15 123.9 9.2 100 467-570 196-304 (343)
144 1fbn_A MJ fibrillarin homologu 99.0 4.2E-10 1.4E-14 115.0 9.8 93 466-568 73-177 (230)
145 2ipx_A RRNA 2'-O-methyltransfe 99.0 3.8E-10 1.3E-14 115.2 9.5 97 466-569 76-182 (233)
146 2frn_A Hypothetical protein PH 99.0 6.7E-10 2.3E-14 117.6 11.6 96 467-569 125-225 (278)
147 3lst_A CALO1 methyltransferase 99.0 3.1E-10 1.1E-14 123.3 9.1 141 466-614 183-332 (348)
148 2pwy_A TRNA (adenine-N(1)-)-me 99.0 9.2E-10 3.1E-14 112.9 12.1 98 466-569 95-198 (258)
149 1tw3_A COMT, carminomycin 4-O- 99.0 6.7E-10 2.3E-14 120.5 11.4 142 466-614 182-335 (360)
150 3fzg_A 16S rRNA methylase; met 99.0 1.9E-10 6.3E-15 117.4 6.5 99 467-568 49-151 (200)
151 4dzr_A Protein-(glutamine-N5) 99.0 6.8E-11 2.3E-15 116.9 2.9 99 466-568 29-164 (215)
152 1vbf_A 231AA long hypothetical 99.0 8.6E-10 2.9E-14 111.6 11.0 96 466-570 69-166 (231)
153 2plw_A Ribosomal RNA methyltra 99.0 6.3E-10 2.2E-14 110.0 9.8 91 466-569 21-154 (201)
154 3tfw_A Putative O-methyltransf 99.0 1E-09 3.4E-14 114.0 11.6 100 467-571 63-172 (248)
155 1i9g_A Hypothetical protein RV 99.0 1.1E-09 3.9E-14 114.1 11.9 99 466-570 98-204 (280)
156 2y1w_A Histone-arginine methyl 99.0 1.1E-09 3.8E-14 119.7 12.2 111 451-568 38-154 (348)
157 3adn_A Spermidine synthase; am 99.0 1.5E-09 5E-14 116.8 12.8 102 467-569 83-198 (294)
158 1jg1_A PIMT;, protein-L-isoasp 99.0 9.4E-10 3.2E-14 112.6 10.6 97 466-570 90-190 (235)
159 3giw_A Protein of unknown func 99.0 7E-10 2.4E-14 118.8 9.8 101 467-569 78-200 (277)
160 3dr5_A Putative O-methyltransf 99.0 1.2E-09 4.1E-14 112.2 10.9 97 468-569 57-163 (221)
161 1dl5_A Protein-L-isoaspartate 99.0 1.4E-09 4.7E-14 117.1 11.8 96 466-569 74-175 (317)
162 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.8E-14 113.1 10.4 101 467-568 49-172 (246)
163 3c3p_A Methyltransferase; NP_9 99.0 1.2E-09 4.2E-14 109.5 10.2 98 467-570 56-161 (210)
164 1u2z_A Histone-lysine N-methyl 99.0 1.2E-09 4E-14 123.8 11.2 103 466-570 241-360 (433)
165 3tr6_A O-methyltransferase; ce 99.0 6.9E-10 2.3E-14 111.9 8.4 100 467-571 64-176 (225)
166 3reo_A (ISO)eugenol O-methyltr 99.0 1.9E-09 6.5E-14 118.6 12.2 137 466-614 202-351 (368)
167 2ozv_A Hypothetical protein AT 99.0 1.5E-09 5E-14 113.9 10.5 103 466-569 35-170 (260)
168 1o9g_A RRNA methyltransferase; 99.0 5.8E-10 2E-14 115.2 7.2 101 467-568 51-213 (250)
169 3duw_A OMT, O-methyltransferas 99.0 1.2E-09 3.9E-14 110.3 9.2 100 467-571 58-169 (223)
170 2yvl_A TRMI protein, hypotheti 98.9 4.1E-09 1.4E-13 107.4 12.6 97 466-569 90-190 (248)
171 3bzb_A Uncharacterized protein 98.9 2.8E-09 9.5E-14 113.0 11.8 117 447-568 63-204 (281)
172 1fp1_D Isoliquiritigenin 2'-O- 98.9 2.3E-09 8E-14 117.5 11.3 91 467-569 209-306 (372)
173 2ld4_A Anamorsin; methyltransf 98.9 3E-10 1E-14 110.7 3.4 87 466-569 11-101 (176)
174 3tma_A Methyltransferase; thum 98.9 7E-09 2.4E-13 113.1 14.0 102 466-569 202-317 (354)
175 1i1n_A Protein-L-isoaspartate 98.9 5.2E-09 1.8E-13 105.7 12.1 97 466-570 76-183 (226)
176 3p9c_A Caffeic acid O-methyltr 98.9 4.6E-09 1.6E-13 115.5 12.3 138 466-614 200-349 (364)
177 1g8a_A Fibrillarin-like PRE-rR 98.9 3.6E-09 1.2E-13 107.2 10.4 96 466-568 72-177 (227)
178 2gpy_A O-methyltransferase; st 98.9 2E-09 6.9E-14 109.6 8.4 98 467-569 54-160 (233)
179 1r18_A Protein-L-isoaspartate( 98.9 4.2E-09 1.4E-13 107.0 10.7 96 466-569 83-194 (227)
180 2nyu_A Putative ribosomal RNA 98.9 3.5E-09 1.2E-13 104.1 9.6 92 466-569 21-145 (196)
181 3bwc_A Spermidine synthase; SA 98.9 5.2E-09 1.8E-13 112.5 11.6 103 466-569 94-210 (304)
182 1ixk_A Methyltransferase; open 98.9 2.7E-09 9.1E-14 115.3 9.4 105 465-570 116-247 (315)
183 3id6_C Fibrillarin-like rRNA/T 98.9 4.4E-09 1.5E-13 109.8 10.6 98 465-569 74-181 (232)
184 3sso_A Methyltransferase; macr 98.9 8.6E-10 2.9E-14 123.6 5.6 92 467-569 216-324 (419)
185 2oxt_A Nucleoside-2'-O-methylt 98.9 2.4E-09 8.2E-14 113.5 8.7 94 466-569 73-185 (265)
186 1xj5_A Spermidine synthase 1; 98.9 1E-08 3.5E-13 112.2 14.0 101 467-568 120-234 (334)
187 3r3h_A O-methyltransferase, SA 98.9 7.9E-10 2.7E-14 114.9 4.9 100 467-571 60-172 (242)
188 1o54_A SAM-dependent O-methylt 98.9 5.8E-09 2E-13 109.4 11.4 96 466-569 111-213 (277)
189 2p41_A Type II methyltransfera 98.9 1.6E-09 5.4E-14 117.1 7.1 101 466-569 81-191 (305)
190 3a27_A TYW2, uncharacterized p 98.9 4.7E-09 1.6E-13 110.9 10.5 98 466-570 118-220 (272)
191 1fp2_A Isoflavone O-methyltran 98.9 3.6E-09 1.2E-13 115.1 9.9 134 467-614 188-337 (352)
192 2wa2_A Non-structural protein 98.9 6.5E-10 2.2E-14 118.6 3.9 94 466-569 81-193 (276)
193 2b25_A Hypothetical protein; s 98.9 7E-09 2.4E-13 112.1 11.8 98 466-569 104-219 (336)
194 2bm8_A Cephalosporin hydroxyla 98.9 1.9E-09 6.4E-14 111.7 6.8 93 467-569 81-187 (236)
195 2h00_A Methyltransferase 10 do 98.9 1.2E-09 4E-14 112.8 5.2 101 467-568 65-191 (254)
196 2pbf_A Protein-L-isoaspartate 98.9 7.2E-09 2.5E-13 104.7 10.5 96 466-569 79-193 (227)
197 1sui_A Caffeoyl-COA O-methyltr 98.9 3.8E-09 1.3E-13 110.1 8.7 99 467-570 79-191 (247)
198 4hc4_A Protein arginine N-meth 98.9 1E-08 3.6E-13 114.1 12.6 113 449-568 69-188 (376)
199 3b3j_A Histone-arginine methyl 98.9 5.6E-09 1.9E-13 119.5 10.7 99 467-568 158-262 (480)
200 1nv8_A HEMK protein; class I a 98.8 1.5E-08 5.3E-13 107.9 13.3 113 450-568 110-248 (284)
201 3cbg_A O-methyltransferase; cy 98.8 8E-09 2.7E-13 106.1 10.3 99 467-570 72-183 (232)
202 3gjy_A Spermidine synthase; AP 98.8 5.8E-09 2E-13 113.7 9.4 118 450-569 69-200 (317)
203 3dou_A Ribosomal RNA large sub 98.8 1E-08 3.5E-13 103.0 10.2 91 466-569 24-139 (191)
204 2hnk_A SAM-dependent O-methylt 98.8 7.4E-09 2.5E-13 106.2 9.3 98 467-569 60-181 (239)
205 1iy9_A Spermidine synthase; ro 98.8 1.2E-08 4.1E-13 108.3 11.1 102 467-569 75-189 (275)
206 2yxl_A PH0851 protein, 450AA l 98.8 1.6E-08 5.5E-13 114.4 11.8 106 465-571 257-391 (450)
207 2igt_A SAM dependent methyltra 98.8 1.6E-08 5.6E-13 110.3 11.5 103 467-570 153-273 (332)
208 4azs_A Methyltransferase WBDD; 98.8 4.8E-09 1.6E-13 122.1 7.6 101 467-569 66-173 (569)
209 1uir_A Polyamine aminopropyltr 98.8 1.6E-08 5.5E-13 109.3 11.0 102 467-569 77-195 (314)
210 1inl_A Spermidine synthase; be 98.8 1.5E-08 5.2E-13 108.6 10.7 102 467-569 90-205 (296)
211 3ajd_A Putative methyltransfer 98.8 1.9E-08 6.5E-13 106.1 11.3 105 466-571 82-213 (274)
212 2avd_A Catechol-O-methyltransf 98.8 1.2E-08 4.2E-13 103.0 9.2 99 467-570 69-180 (229)
213 2pt6_A Spermidine synthase; tr 98.8 2.2E-08 7.5E-13 108.8 11.4 102 467-569 116-230 (321)
214 2i7c_A Spermidine synthase; tr 98.8 2E-08 6.7E-13 107.0 10.8 102 467-569 78-192 (283)
215 2o07_A Spermidine synthase; st 98.8 2.7E-08 9.2E-13 107.3 11.8 102 467-569 95-209 (304)
216 3c3y_A Pfomt, O-methyltransfer 98.8 1.1E-08 3.8E-13 105.6 8.4 99 467-570 70-182 (237)
217 1sqg_A SUN protein, FMU protei 98.8 1.6E-08 5.4E-13 113.6 10.1 106 465-571 244-376 (429)
218 1ne2_A Hypothetical protein TA 98.7 5.7E-08 1.9E-12 96.4 12.7 91 467-568 51-146 (200)
219 2b2c_A Spermidine synthase; be 98.7 1.1E-08 3.9E-13 110.9 8.0 102 467-569 108-222 (314)
220 2qm3_A Predicted methyltransfe 98.7 8.9E-08 3.1E-12 105.5 15.2 99 467-569 172-278 (373)
221 1zg3_A Isoflavanone 4'-O-methy 98.7 1.6E-08 5.5E-13 110.2 9.0 134 467-614 193-343 (358)
222 4dmg_A Putative uncharacterize 98.7 2.9E-08 1E-12 110.9 11.3 104 467-571 214-328 (393)
223 3tm4_A TRNA (guanine N2-)-meth 98.7 2.5E-08 8.5E-13 110.2 10.4 100 466-568 216-329 (373)
224 4a6d_A Hydroxyindole O-methylt 98.7 5.1E-08 1.8E-12 106.7 12.7 143 467-614 179-330 (353)
225 1mjf_A Spermidine synthase; sp 98.7 3.5E-08 1.2E-12 104.8 10.9 100 467-569 75-193 (281)
226 2b78_A Hypothetical protein SM 98.7 5.5E-08 1.9E-12 108.0 13.0 104 467-571 212-333 (385)
227 3m6w_A RRNA methylase; rRNA me 98.7 2.1E-08 7.2E-13 114.4 9.3 105 466-572 100-232 (464)
228 1zq9_A Probable dimethyladenos 98.7 2.1E-08 7.2E-13 106.8 8.8 97 466-566 27-144 (285)
229 1wy7_A Hypothetical protein PH 98.7 2E-07 6.7E-12 92.7 14.1 96 466-568 48-148 (207)
230 4dcm_A Ribosomal RNA large sub 98.7 1E-06 3.6E-11 97.6 21.3 128 723-857 224-366 (375)
231 2cmg_A Spermidine synthase; tr 98.7 7.3E-08 2.5E-12 101.9 11.1 94 467-569 72-171 (262)
232 3e8s_A Putative SAM dependent 98.7 2.2E-08 7.5E-13 99.6 6.6 131 722-859 53-227 (227)
233 2frx_A Hypothetical protein YE 98.6 8.8E-08 3E-12 109.7 11.7 105 467-572 117-249 (479)
234 1wxx_A TT1595, hypothetical pr 98.6 5.2E-08 1.8E-12 107.7 9.0 104 467-571 209-327 (382)
235 3c0k_A UPF0064 protein YCCW; P 98.6 1.7E-07 5.7E-12 104.1 12.9 104 467-571 220-341 (396)
236 3pfg_A N-methyltransferase; N, 98.6 2.7E-08 9.2E-13 102.8 5.8 133 723-859 52-249 (263)
237 2yx1_A Hypothetical protein MJ 98.6 2.7E-07 9.4E-12 100.5 13.8 93 467-569 195-291 (336)
238 3frh_A 16S rRNA methylase; met 98.6 1.2E-07 4.2E-12 99.9 10.6 100 466-568 104-205 (253)
239 2as0_A Hypothetical protein PH 98.6 8.1E-08 2.8E-12 106.5 9.7 104 467-571 217-337 (396)
240 3kr9_A SAM-dependent methyltra 98.6 1.4E-07 4.9E-12 98.1 10.6 98 467-568 15-118 (225)
241 3v97_A Ribosomal RNA large sub 98.6 1.3E-07 4.5E-12 112.9 11.6 103 467-570 539-658 (703)
242 1uwv_A 23S rRNA (uracil-5-)-me 98.6 4.4E-07 1.5E-11 102.2 15.1 97 466-568 285-388 (433)
243 2f8l_A Hypothetical protein LM 98.6 2.4E-07 8.2E-12 100.7 12.5 102 466-570 129-257 (344)
244 3dlc_A Putative S-adenosyl-L-m 98.6 3.3E-08 1.1E-12 97.8 4.9 130 724-859 46-214 (219)
245 3hnr_A Probable methyltransfer 98.6 9E-08 3.1E-12 95.7 8.1 133 722-859 46-212 (220)
246 2jjq_A Uncharacterized RNA met 98.6 3.9E-07 1.3E-11 102.8 14.1 95 467-568 290-386 (425)
247 3h2b_A SAM-dependent methyltra 98.6 6.8E-08 2.3E-12 95.6 6.9 132 723-858 43-194 (203)
248 2p7i_A Hypothetical protein; p 98.5 4.6E-08 1.6E-12 98.6 5.3 94 723-823 44-141 (250)
249 2h1r_A Dimethyladenosine trans 98.5 2.5E-07 8.6E-12 99.3 11.2 71 466-539 41-114 (299)
250 3i9f_A Putative type 11 methyl 98.5 8.1E-08 2.8E-12 92.4 6.7 132 722-864 18-165 (170)
251 3lec_A NADB-rossmann superfami 98.5 2.6E-07 9E-12 96.4 10.6 99 467-569 21-125 (230)
252 3gnl_A Uncharacterized protein 98.5 2.4E-07 8.3E-12 97.5 10.4 98 467-568 21-124 (244)
253 2xvm_A Tellurite resistance pr 98.5 4.2E-08 1.4E-12 96.0 4.4 116 722-845 33-170 (199)
254 3m4x_A NOL1/NOP2/SUN family pr 98.5 1.5E-07 5E-12 107.3 9.3 105 466-571 104-236 (456)
255 3k6r_A Putative transferase PH 98.5 3.6E-07 1.2E-11 97.8 11.1 116 440-568 104-224 (278)
256 3dh0_A SAM dependent methyltra 98.5 5.9E-08 2E-12 97.0 4.5 132 722-859 38-193 (219)
257 1y8c_A S-adenosylmethionine-de 98.5 1.2E-07 4E-12 95.7 6.6 97 722-822 38-141 (246)
258 3lcv_B Sisomicin-gentamicin re 98.5 2.5E-07 8.7E-12 98.5 9.4 100 466-568 131-235 (281)
259 3dmg_A Probable ribosomal RNA 98.5 3E-07 1E-11 102.2 10.3 128 723-858 235-372 (381)
260 2zfu_A Nucleomethylin, cerebra 98.5 3.5E-07 1.2E-11 91.4 9.6 119 722-859 68-191 (215)
261 3b5i_A S-adenosyl-L-methionine 98.5 3.6E-07 1.2E-11 101.7 10.6 101 468-569 53-225 (374)
262 4hg2_A Methyltransferase type 98.5 1.4E-08 4.6E-13 107.1 -1.0 93 723-822 41-134 (257)
263 3ocj_A Putative exported prote 98.5 7.4E-08 2.5E-12 102.4 4.7 134 723-859 120-304 (305)
264 3ou2_A SAM-dependent methyltra 98.5 7.8E-08 2.7E-12 95.4 4.4 130 723-857 48-214 (218)
265 3jwg_A HEN1, methyltransferase 98.5 2E-07 7E-12 93.4 7.4 135 722-859 30-210 (219)
266 3dli_A Methyltransferase; PSI- 98.5 3E-08 1E-12 101.2 1.3 116 722-843 42-179 (240)
267 1kpg_A CFA synthase;, cyclopro 98.4 5.3E-08 1.8E-12 101.8 2.9 97 723-823 66-168 (287)
268 3grz_A L11 mtase, ribosomal pr 98.4 1.2E-07 4.2E-12 94.2 5.2 118 723-849 62-186 (205)
269 3kkz_A Uncharacterized protein 98.4 1.1E-07 3.7E-12 98.6 4.8 117 722-844 47-192 (267)
270 1dus_A MJ0882; hypothetical pr 98.4 6E-08 2E-12 93.9 2.6 130 722-858 53-193 (194)
271 3bxo_A N,N-dimethyltransferase 98.4 1.2E-07 4.3E-12 95.5 4.8 98 722-823 41-141 (239)
272 3ofk_A Nodulation protein S; N 98.4 5.1E-08 1.7E-12 97.4 1.7 99 721-823 51-154 (216)
273 1xtp_A LMAJ004091AAA; SGPP, st 98.4 3.5E-08 1.2E-12 100.7 0.5 121 722-845 94-235 (254)
274 1nkv_A Hypothetical protein YJ 98.4 5.5E-08 1.9E-12 99.5 1.7 114 723-843 38-182 (256)
275 4htf_A S-adenosylmethionine-de 98.4 1.1E-07 3.9E-12 99.4 4.0 95 723-823 70-173 (285)
276 3e23_A Uncharacterized protein 98.4 1.2E-07 4.2E-12 94.4 3.9 118 722-845 44-179 (211)
277 2ih2_A Modification methylase 98.4 4.3E-07 1.5E-11 100.2 8.1 107 451-571 27-166 (421)
278 2xyq_A Putative 2'-O-methyl tr 98.4 7.2E-07 2.5E-11 96.1 9.4 89 466-569 62-171 (290)
279 3hem_A Cyclopropane-fatty-acyl 98.4 9.5E-08 3.2E-12 101.1 2.4 98 723-823 74-183 (302)
280 2i62_A Nicotinamide N-methyltr 98.4 2E-07 6.9E-12 95.4 4.8 120 723-845 58-236 (265)
281 3cgg_A SAM-dependent methyltra 98.4 3.2E-07 1.1E-11 88.8 5.9 132 722-859 47-195 (195)
282 3f4k_A Putative methyltransfer 98.4 8.9E-08 3E-12 98.0 1.9 116 723-844 48-192 (257)
283 3cc8_A Putative methyltransfer 98.4 2.2E-07 7.4E-12 92.6 4.7 96 721-823 32-130 (230)
284 3d2l_A SAM-dependent methyltra 98.4 3.3E-07 1.1E-11 92.6 6.0 95 723-822 35-136 (243)
285 3hp7_A Hemolysin, putative; st 98.4 6.8E-07 2.3E-11 96.4 8.8 128 723-859 87-250 (291)
286 3hm2_A Precorrin-6Y C5,15-meth 98.4 4.3E-07 1.5E-11 87.4 6.6 113 723-844 27-149 (178)
287 3mti_A RRNA methylase; SAM-dep 98.4 2.8E-07 9.6E-12 90.0 5.2 133 723-858 24-183 (185)
288 3sm3_A SAM-dependent methyltra 98.4 1.5E-07 5.2E-12 94.2 3.4 120 723-845 32-204 (235)
289 3lcc_A Putative methyl chlorid 98.3 5.8E-07 2E-11 91.2 7.6 117 723-845 68-204 (235)
290 2o57_A Putative sarcosine dime 98.3 9.8E-08 3.3E-12 100.3 1.9 96 722-824 83-188 (297)
291 2efj_A 3,7-dimethylxanthine me 98.3 8.8E-07 3E-11 98.9 9.6 145 468-614 53-288 (384)
292 3ccf_A Cyclopropane-fatty-acyl 98.3 1.8E-07 6E-12 97.8 3.7 95 722-823 58-154 (279)
293 2okc_A Type I restriction enzy 98.3 2.2E-06 7.5E-11 96.7 12.9 103 466-570 170-308 (445)
294 3l8d_A Methyltransferase; stru 98.3 2E-07 6.8E-12 94.4 3.9 117 723-845 55-197 (242)
295 1xxl_A YCGJ protein; structura 98.3 1.5E-07 5.1E-12 96.3 2.9 95 722-823 22-124 (239)
296 3bt7_A TRNA (uracil-5-)-methyl 98.3 8.3E-07 2.8E-11 97.8 8.8 94 468-569 214-326 (369)
297 3evf_A RNA-directed RNA polyme 98.3 1.1E-06 3.7E-11 93.9 9.2 118 445-569 57-184 (277)
298 1vl5_A Unknown conserved prote 98.3 1.6E-07 5.5E-12 96.7 2.8 96 721-823 37-140 (260)
299 3ujc_A Phosphoethanolamine N-m 98.3 1.8E-07 6E-12 95.7 3.0 117 722-844 56-202 (266)
300 3g5l_A Putative S-adenosylmeth 98.3 2.5E-07 8.4E-12 94.8 3.9 96 722-822 45-144 (253)
301 3m70_A Tellurite resistance pr 98.3 3.1E-07 1.1E-11 96.1 4.6 116 722-845 121-257 (286)
302 1xdz_A Methyltransferase GIDB; 98.3 7.1E-07 2.4E-11 91.6 7.1 134 722-865 71-225 (240)
303 2ex4_A Adrenal gland protein A 98.3 2.2E-07 7.4E-12 94.9 3.2 121 722-845 80-222 (241)
304 2fk8_A Methoxy mycolic acid sy 98.3 1.7E-07 6E-12 99.7 2.5 98 723-824 92-195 (318)
305 3g5t_A Trans-aconitate 3-methy 98.3 1.7E-07 5.8E-12 99.1 2.0 94 721-821 36-147 (299)
306 3thr_A Glycine N-methyltransfe 98.3 1.3E-07 4.6E-12 98.9 1.3 100 722-825 58-177 (293)
307 3dtn_A Putative methyltransfer 98.3 4.3E-07 1.5E-11 91.8 4.9 135 723-862 46-229 (234)
308 3gu3_A Methyltransferase; alph 98.3 2.4E-07 8.3E-12 97.4 3.1 97 722-825 23-128 (284)
309 4gek_A TRNA (CMO5U34)-methyltr 98.3 1.4E-07 4.8E-12 99.5 1.1 97 724-824 73-179 (261)
310 3lpm_A Putative methyltransfer 98.3 1.2E-06 4.1E-11 91.0 8.0 120 723-844 51-197 (259)
311 2nxc_A L11 mtase, ribosomal pr 98.3 5.5E-07 1.9E-11 93.9 5.4 124 723-858 122-254 (254)
312 2a14_A Indolethylamine N-methy 98.3 4.1E-07 1.4E-11 94.9 4.3 135 723-859 57-260 (263)
313 3gru_A Dimethyladenosine trans 98.3 3.1E-06 1E-10 91.3 11.0 71 466-539 49-122 (295)
314 3ege_A Putative methyltransfer 98.3 2.7E-07 9.2E-12 95.8 2.6 94 722-823 35-130 (261)
315 1yub_A Ermam, rRNA methyltrans 98.2 3.5E-08 1.2E-12 102.2 -4.1 96 466-568 28-144 (245)
316 4dzr_A Protein-(glutamine-N5) 98.2 3.9E-07 1.3E-11 89.8 3.6 135 722-859 31-205 (215)
317 2yqz_A Hypothetical protein TT 98.2 2.9E-07 9.9E-12 94.1 2.8 94 722-822 40-140 (263)
318 3eey_A Putative rRNA methylase 98.2 4.3E-07 1.5E-11 89.5 3.7 136 723-860 24-189 (197)
319 2pxx_A Uncharacterized protein 98.2 3.5E-07 1.2E-11 90.3 3.1 132 723-858 44-197 (215)
320 1qam_A ERMC' methyltransferase 98.2 1.7E-06 5.8E-11 90.0 8.1 69 466-538 29-101 (244)
321 3orh_A Guanidinoacetate N-meth 98.2 2.2E-07 7.4E-12 95.9 1.1 99 723-823 62-170 (236)
322 3bus_A REBM, methyltransferase 98.2 2.1E-07 7.1E-12 96.3 0.9 95 722-823 62-166 (273)
323 2b3t_A Protein methyltransfera 98.2 7.8E-07 2.7E-11 93.3 5.1 132 723-858 111-275 (276)
324 2gs9_A Hypothetical protein TT 98.2 4.2E-07 1.4E-11 90.4 2.7 94 722-824 37-133 (211)
325 3e05_A Precorrin-6Y C5,15-meth 98.2 6.2E-07 2.1E-11 89.2 3.9 113 723-844 42-164 (204)
326 1zx0_A Guanidinoacetate N-meth 98.2 2.7E-07 9.1E-12 94.2 1.1 99 723-824 62-171 (236)
327 2p35_A Trans-aconitate 2-methy 98.2 5.1E-07 1.7E-11 92.3 3.2 96 722-824 34-133 (259)
328 3mgg_A Methyltransferase; NYSG 98.2 3.4E-07 1.2E-11 95.0 2.0 95 723-823 39-142 (276)
329 3opn_A Putative hemolysin; str 98.2 2E-06 6.7E-11 89.3 7.4 127 723-859 39-202 (232)
330 3evz_A Methyltransferase; NYSG 98.2 1.3E-06 4.6E-11 88.1 6.0 134 723-858 57-219 (230)
331 3duw_A OMT, O-methyltransferas 98.2 8.1E-07 2.8E-11 89.4 4.3 129 722-859 59-222 (223)
332 3jwh_A HEN1; methyltransferase 98.2 1E-06 3.4E-11 88.4 4.7 120 722-845 30-189 (217)
333 3bkw_A MLL3908 protein, S-aden 98.2 4.6E-07 1.6E-11 91.6 2.2 97 722-823 44-144 (243)
334 2yxd_A Probable cobalt-precorr 98.2 2.8E-06 9.5E-11 81.5 7.5 108 723-845 37-154 (183)
335 2kw5_A SLR1183 protein; struct 98.2 7.6E-07 2.6E-11 87.9 3.6 113 724-845 32-168 (202)
336 3k0b_A Predicted N6-adenine-sp 98.2 8.2E-06 2.8E-10 91.1 12.3 98 466-568 200-349 (393)
337 1vlm_A SAM-dependent methyltra 98.2 1E-06 3.5E-11 88.7 4.5 112 722-845 48-185 (219)
338 1l3i_A Precorrin-6Y methyltran 98.2 8.6E-07 3E-11 85.6 3.8 113 722-844 34-156 (192)
339 1jsx_A Glucose-inhibited divis 98.2 7.3E-07 2.5E-11 88.4 3.3 124 723-859 67-205 (207)
340 4e2x_A TCAB9; kijanose, tetron 98.2 1.7E-07 5.9E-12 103.8 -1.3 117 722-845 108-250 (416)
341 2b9e_A NOL1/NOP2/SUN domain fa 98.1 1.7E-05 5.9E-10 85.8 14.0 104 466-571 101-236 (309)
342 3ldu_A Putative methylase; str 98.1 5.6E-06 1.9E-10 92.2 9.9 98 466-568 194-343 (385)
343 2g72_A Phenylethanolamine N-me 98.1 1.7E-06 5.6E-11 91.0 5.3 120 723-844 73-252 (289)
344 2avn_A Ubiquinone/menaquinone 98.1 7.6E-07 2.6E-11 92.2 2.6 98 722-825 55-154 (260)
345 3tfw_A Putative O-methyltransf 98.1 3.6E-06 1.2E-10 87.2 7.6 130 721-859 63-225 (248)
346 3g2m_A PCZA361.24; SAM-depende 98.1 4.8E-07 1.6E-11 95.6 0.9 95 724-823 85-190 (299)
347 3tr6_A O-methyltransferase; ce 98.1 1.3E-06 4.3E-11 87.9 3.8 127 722-859 65-224 (225)
348 3i53_A O-methyltransferase; CO 98.1 1.5E-06 5.2E-11 93.4 4.6 134 717-858 165-331 (332)
349 1pjz_A Thiopurine S-methyltran 98.1 2.9E-07 9.8E-12 92.6 -1.0 118 723-845 24-173 (203)
350 3g89_A Ribosomal RNA small sub 98.1 1.7E-06 5.9E-11 90.3 4.9 136 722-866 81-236 (249)
351 2qfm_A Spermine synthase; sper 98.1 3.6E-06 1.2E-10 93.3 7.5 116 467-584 188-327 (364)
352 3vc1_A Geranyl diphosphate 2-C 98.1 7.1E-07 2.4E-11 95.1 1.8 115 722-844 118-265 (312)
353 3m33_A Uncharacterized protein 98.1 1E-06 3.4E-11 89.5 2.8 109 723-843 50-162 (226)
354 3mcz_A O-methyltransferase; ad 98.1 1.8E-06 6.3E-11 93.2 5.0 138 717-859 174-349 (352)
355 3ldg_A Putative uncharacterize 98.1 1.7E-05 5.7E-10 88.5 12.8 99 466-569 193-343 (384)
356 3fut_A Dimethyladenosine trans 98.1 1.1E-05 3.9E-10 85.8 10.9 75 466-547 46-123 (271)
357 3tqs_A Ribosomal RNA small sub 98.1 9.7E-06 3.3E-10 85.5 10.1 70 466-538 28-103 (255)
358 2aot_A HMT, histamine N-methyl 98.1 4.8E-07 1.6E-11 95.5 0.1 96 723-822 54-171 (292)
359 1ri5_A MRNA capping enzyme; me 98.1 4.9E-07 1.7E-11 94.2 0.1 101 723-825 66-176 (298)
360 2p8j_A S-adenosylmethionine-de 98.1 6.8E-07 2.3E-11 88.4 1.1 96 723-823 25-128 (209)
361 4fsd_A Arsenic methyltransfera 98.1 7.6E-07 2.6E-11 98.3 1.6 115 723-843 85-246 (383)
362 3ntv_A MW1564 protein; rossman 98.1 3.8E-06 1.3E-10 86.0 6.6 129 722-859 72-231 (232)
363 1m6e_X S-adenosyl-L-methionnin 98.1 3.6E-06 1.2E-10 93.2 6.8 100 468-568 52-208 (359)
364 3q7e_A Protein arginine N-meth 98.1 1.1E-06 3.6E-11 96.2 2.6 97 723-822 68-172 (349)
365 3q87_B N6 adenine specific DNA 98.1 6.7E-06 2.3E-10 80.3 8.0 125 723-858 25-161 (170)
366 2frn_A Hypothetical protein PH 98.1 1.6E-06 5.6E-11 91.6 3.8 112 723-844 127-253 (278)
367 2fca_A TRNA (guanine-N(7)-)-me 98.1 2.5E-06 8.4E-11 86.5 4.8 116 723-843 40-174 (213)
368 2ip2_A Probable phenazine-spec 98.0 5.7E-06 1.9E-10 88.7 7.7 133 718-858 165-333 (334)
369 1yzh_A TRNA (guanine-N(7)-)-me 98.0 3.2E-06 1.1E-10 85.0 5.3 118 723-844 43-178 (214)
370 3u81_A Catechol O-methyltransf 98.0 2.1E-06 7.2E-11 86.8 4.0 132 721-859 58-213 (221)
371 1ve3_A Hypothetical protein PH 98.0 9.8E-07 3.4E-11 88.2 1.5 97 723-825 40-144 (227)
372 2gb4_A Thiopurine S-methyltran 98.0 1.3E-06 4.6E-11 91.5 2.6 118 723-845 70-224 (252)
373 2vdw_A Vaccinia virus capping 98.0 8.8E-07 3E-11 95.2 1.0 101 723-825 50-171 (302)
374 3r0q_C Probable protein argini 98.0 1.3E-06 4.6E-11 96.4 2.5 97 723-822 65-168 (376)
375 3g07_A 7SK snRNA methylphospha 98.0 7.5E-07 2.6E-11 94.5 -0.0 44 780-823 174-220 (292)
376 2dul_A N(2),N(2)-dimethylguano 98.0 1.5E-05 5.3E-10 88.5 10.5 98 467-569 47-164 (378)
377 3r3h_A O-methyltransferase, SA 98.0 6.6E-06 2.3E-10 85.3 6.9 131 721-859 60-220 (242)
378 1ej0_A FTSJ; methyltransferase 98.0 5.2E-06 1.8E-10 78.5 5.5 125 723-858 24-177 (180)
379 2ar0_A M.ecoki, type I restric 98.0 1E-05 3.6E-10 93.8 8.8 104 466-570 168-313 (541)
380 3axs_A Probable N(2),N(2)-dime 98.0 2E-05 6.9E-10 88.2 10.6 97 467-569 52-158 (392)
381 3lst_A CALO1 methyltransferase 98.0 4E-06 1.4E-10 91.0 4.9 134 717-858 180-347 (348)
382 1qzz_A RDMB, aclacinomycin-10- 98.0 3.2E-06 1.1E-10 91.9 4.0 135 718-859 179-356 (374)
383 1tw3_A COMT, carminomycin 4-O- 98.0 5.2E-06 1.8E-10 89.9 5.6 135 718-859 180-356 (360)
384 3njr_A Precorrin-6Y methylase; 98.0 4E-06 1.4E-10 84.5 4.4 110 723-844 57-176 (204)
385 3ckk_A TRNA (guanine-N(7)-)-me 98.0 3.8E-06 1.3E-10 87.0 4.3 116 723-842 48-189 (235)
386 1wzn_A SAM-dependent methyltra 97.9 1.9E-06 6.4E-11 88.0 1.6 96 722-823 42-145 (252)
387 3c3p_A Methyltransferase; NP_9 97.9 3.5E-06 1.2E-10 84.3 3.5 92 722-823 57-160 (210)
388 3gwz_A MMCR; methyltransferase 97.9 5.2E-06 1.8E-10 91.1 5.2 135 717-858 198-368 (369)
389 1x19_A CRTF-related protein; m 97.9 6E-06 2.1E-10 89.8 5.5 135 718-859 187-359 (359)
390 2plw_A Ribosomal RNA methyltra 97.9 9.7E-06 3.3E-10 79.9 6.3 126 723-858 24-195 (201)
391 1g6q_1 HnRNP arginine N-methyl 97.9 3E-06 1E-10 91.8 2.7 96 723-821 40-143 (328)
392 3dp7_A SAM-dependent methyltra 97.9 2.5E-06 8.4E-11 93.4 1.9 100 720-823 178-287 (363)
393 3ggd_A SAM-dependent methyltra 97.9 1.4E-06 4.8E-11 88.7 -0.0 98 723-824 58-164 (245)
394 1nt2_A Fibrillarin-like PRE-rR 97.9 5.5E-06 1.9E-10 84.2 4.3 92 723-822 59-160 (210)
395 3bgv_A MRNA CAP guanine-N7 met 97.9 1.8E-06 6.1E-11 91.9 0.6 102 722-825 35-157 (313)
396 2r3s_A Uncharacterized protein 97.9 5.9E-06 2E-10 88.2 4.2 134 720-859 164-335 (335)
397 2esr_A Methyltransferase; stru 97.9 1.3E-06 4.6E-11 84.5 -0.9 97 723-825 33-140 (177)
398 3dxy_A TRNA (guanine-N(7)-)-me 97.9 2.3E-06 7.8E-11 87.6 0.8 116 723-841 36-170 (218)
399 3o4f_A Spermidine synthase; am 97.9 0.00014 4.8E-09 78.5 14.6 127 440-569 57-198 (294)
400 3dou_A Ribosomal RNA large sub 97.8 9.3E-06 3.2E-10 81.4 4.6 126 723-858 27-180 (191)
401 2p41_A Type II methyltransfera 97.8 7.3E-06 2.5E-10 88.5 3.4 99 723-823 84-191 (305)
402 2ift_A Putative methylase HI07 97.8 3.8E-06 1.3E-10 84.3 1.0 125 723-858 55-193 (201)
403 2gpy_A O-methyltransferase; st 97.8 4E-06 1.4E-10 85.2 1.1 93 722-823 55-160 (233)
404 3p9n_A Possible methyltransfer 97.8 3.1E-06 1.1E-10 83.2 0.2 98 723-824 46-154 (189)
405 2bm8_A Cephalosporin hydroxyla 97.8 2E-05 6.9E-10 81.4 6.2 111 723-843 83-214 (236)
406 1ws6_A Methyltransferase; stru 97.8 2.2E-06 7.6E-11 81.7 -1.0 95 723-825 43-149 (171)
407 3iv6_A Putative Zn-dependent a 97.8 6.3E-06 2.1E-10 87.4 2.0 115 723-842 47-171 (261)
408 2fyt_A Protein arginine N-meth 97.8 6.8E-06 2.3E-10 89.6 2.1 95 723-820 66-168 (340)
409 2y1w_A Histone-arginine methyl 97.7 7.8E-06 2.7E-10 89.2 2.3 96 723-822 52-154 (348)
410 2avd_A Catechol-O-methyltransf 97.7 6.3E-06 2.2E-10 83.0 1.4 128 721-859 69-229 (229)
411 3gcz_A Polyprotein; flavivirus 97.7 1.2E-05 4E-10 86.1 3.4 117 445-569 73-201 (282)
412 2ozv_A Hypothetical protein AT 97.7 3E-05 1E-09 81.0 6.4 117 723-842 38-188 (260)
413 2fhp_A Methylase, putative; al 97.7 2.9E-06 9.8E-11 82.2 -1.4 97 723-825 46-156 (187)
414 1qyr_A KSGA, high level kasuga 97.7 2.5E-05 8.5E-10 82.2 5.5 69 466-538 20-97 (252)
415 2nyu_A Putative ribosomal RNA 97.7 1.7E-05 5.7E-10 77.7 3.9 127 723-858 24-186 (196)
416 3v97_A Ribosomal RNA large sub 97.7 0.00022 7.4E-09 85.3 14.1 120 723-844 541-678 (703)
417 3fpf_A Mtnas, putative unchara 97.7 8.6E-06 2.9E-10 88.1 1.8 124 723-858 124-263 (298)
418 3mq2_A 16S rRNA methyltransfer 97.7 1.2E-05 4.1E-10 80.5 2.8 116 723-845 29-181 (218)
419 2pjd_A Ribosomal RNA small sub 97.7 8.9E-06 3.1E-10 88.4 1.9 130 723-859 198-337 (343)
420 2ipx_A RRNA 2'-O-methyltransfe 97.7 1.2E-05 4E-10 81.8 2.7 130 723-858 79-231 (233)
421 3p2e_A 16S rRNA methylase; met 97.7 1.1E-05 3.8E-10 82.9 2.4 96 723-821 26-137 (225)
422 2hnk_A SAM-dependent O-methylt 97.7 1E-05 3.5E-10 82.8 2.1 128 722-860 61-232 (239)
423 1nv8_A HEMK protein; class I a 97.7 2E-05 6.9E-10 83.9 4.4 129 723-859 125-282 (284)
424 3bkx_A SAM-dependent methyltra 97.7 2.6E-05 8.9E-10 80.6 5.1 98 723-823 45-159 (275)
425 3dr5_A Putative O-methyltransf 97.7 1.1E-05 3.9E-10 82.6 2.3 128 724-860 59-214 (221)
426 2vdv_E TRNA (guanine-N(7)-)-me 97.7 1.1E-05 3.9E-10 83.0 2.3 115 723-840 51-191 (246)
427 2oxt_A Nucleoside-2'-O-methylt 97.7 2.5E-06 8.4E-11 90.4 -2.8 98 723-823 76-185 (265)
428 3gdh_A Trimethylguanosine synt 97.7 1.5E-06 5.2E-11 88.4 -4.3 94 723-823 80-181 (241)
429 3ua3_A Protein arginine N-meth 97.7 5.5E-05 1.9E-09 89.9 8.2 114 449-566 390-531 (745)
430 3uzu_A Ribosomal RNA small sub 97.7 7.8E-05 2.7E-09 79.6 8.6 69 466-538 41-121 (279)
431 3id6_C Fibrillarin-like rRNA/T 97.7 1.7E-05 5.7E-10 82.8 3.3 132 723-860 78-232 (232)
432 1yb2_A Hypothetical protein TA 97.7 5E-05 1.7E-09 79.6 6.9 108 722-843 111-232 (275)
433 3cbg_A O-methyltransferase; cy 97.7 1.1E-05 3.8E-10 82.6 1.9 127 722-859 73-232 (232)
434 3lbf_A Protein-L-isoaspartate 97.7 5.6E-06 1.9E-10 82.3 -0.4 91 722-825 78-176 (210)
435 2ld4_A Anamorsin; methyltransf 97.7 2.5E-05 8.6E-10 75.7 4.1 124 723-866 14-175 (176)
436 1vbf_A 231AA long hypothetical 97.6 6.3E-06 2.2E-10 83.1 -0.4 90 723-825 72-167 (231)
437 2r6z_A UPF0341 protein in RSP 97.6 9.4E-06 3.2E-10 85.6 0.9 73 467-540 83-170 (258)
438 4gqb_A Protein arginine N-meth 97.6 0.00012 4.1E-09 86.5 10.3 95 467-566 357-464 (637)
439 1g8a_A Fibrillarin-like PRE-rR 97.6 2E-05 6.7E-10 79.6 3.1 126 723-859 75-227 (227)
440 3mb5_A SAM-dependent methyltra 97.6 2.6E-05 8.9E-10 80.0 4.0 107 722-842 94-216 (255)
441 2pwy_A TRNA (adenine-N(1)-)-me 97.6 2.3E-05 7.8E-10 80.1 3.5 108 722-842 97-218 (258)
442 3ftd_A Dimethyladenosine trans 97.6 0.00014 4.7E-09 76.3 9.2 93 466-568 30-130 (249)
443 1fbn_A MJ fibrillarin homologu 97.6 3.2E-05 1.1E-09 78.7 4.2 129 723-859 76-228 (230)
444 3lkd_A Type I restriction-modi 97.6 0.00026 9E-09 82.3 12.2 120 451-571 205-360 (542)
445 3sso_A Methyltransferase; macr 97.6 1.1E-05 3.7E-10 90.7 0.5 110 722-842 217-361 (419)
446 1o9g_A RRNA methyltransferase; 97.6 1.2E-05 3.9E-10 82.9 0.6 101 723-825 53-216 (250)
447 1mjf_A Spermidine synthase; sp 97.6 3.3E-05 1.1E-09 81.9 4.1 135 722-859 76-239 (281)
448 1p91_A Ribosomal RNA large sub 97.6 1.1E-05 3.6E-10 83.5 0.2 90 722-824 86-179 (269)
449 3s1s_A Restriction endonucleas 97.6 0.00036 1.2E-08 84.1 12.9 105 467-571 321-467 (878)
450 3khk_A Type I restriction-modi 97.6 0.00014 4.8E-09 84.5 9.2 102 469-571 246-397 (544)
451 1sui_A Caffeoyl-COA O-methyltr 97.5 3.1E-05 1.1E-09 80.5 3.1 94 721-823 79-190 (247)
452 1ixk_A Methyltransferase; open 97.5 3E-05 1E-09 83.7 2.9 118 723-842 120-269 (315)
453 3eld_A Methyltransferase; flav 97.5 0.00017 5.7E-09 77.8 8.5 116 445-569 64-191 (300)
454 2qe6_A Uncharacterized protein 97.5 3.4E-05 1.2E-09 81.6 2.9 101 721-825 77-198 (274)
455 3ll7_A Putative methyltransfer 97.5 0.00013 4.3E-09 82.2 7.3 71 467-538 93-170 (410)
456 2yvl_A TRMI protein, hypotheti 97.5 5.6E-05 1.9E-09 76.7 3.9 106 723-841 93-208 (248)
457 3htx_A HEN1; HEN1, small RNA m 97.5 4.3E-05 1.5E-09 92.2 3.4 101 722-824 722-835 (950)
458 3c3y_A Pfomt, O-methyltransfer 97.5 2.9E-05 9.8E-10 80.0 1.6 94 721-823 70-181 (237)
459 2fpo_A Methylase YHHF; structu 97.4 2.8E-05 9.5E-10 78.0 1.3 126 723-858 56-191 (202)
460 1fp1_D Isoliquiritigenin 2'-O- 97.4 8E-06 2.7E-10 89.4 -2.9 97 719-823 207-306 (372)
461 1iy9_A Spermidine synthase; ro 97.4 0.00012 4E-09 77.6 6.1 137 722-860 76-237 (275)
462 1i1n_A Protein-L-isoaspartate 97.4 1E-05 3.4E-10 81.5 -2.0 89 723-824 79-183 (226)
463 1inl_A Spermidine synthase; be 97.4 8.4E-05 2.9E-09 79.5 4.9 137 722-860 91-253 (296)
464 2igt_A SAM dependent methyltra 97.4 3E-05 1E-09 84.6 1.4 118 723-843 155-299 (332)
465 3bwc_A Spermidine synthase; SA 97.4 7.1E-05 2.4E-09 80.3 4.2 136 722-859 96-258 (304)
466 1o54_A SAM-dependent O-methylt 97.4 7.9E-05 2.7E-09 77.9 4.4 107 723-843 114-234 (277)
467 3a27_A TYW2, uncharacterized p 97.4 3.7E-05 1.3E-09 81.1 1.9 111 723-843 121-246 (272)
468 1m6y_A S-adenosyl-methyltransf 97.4 8.7E-05 3E-09 80.2 4.7 41 466-506 25-69 (301)
469 2wa2_A Non-structural protein 97.4 1.4E-05 4.6E-10 85.3 -1.7 96 723-822 84-192 (276)
470 2pt6_A Spermidine synthase; tr 97.4 8.8E-05 3E-09 80.5 4.4 136 722-860 117-278 (321)
471 3adn_A Spermidine synthase; am 97.4 0.00024 8.1E-09 76.3 7.6 138 721-860 83-246 (294)
472 1i9g_A Hypothetical protein RV 97.4 8.3E-05 2.8E-09 77.3 3.8 106 723-841 101-223 (280)
473 1xj5_A Spermidine synthase 1; 97.4 4.3E-05 1.5E-09 83.5 1.7 99 722-822 121-234 (334)
474 3cvo_A Methyltransferase-like 97.4 0.0016 5.5E-08 66.7 13.1 92 468-568 31-153 (202)
475 2b2c_A Spermidine synthase; be 97.3 0.0001 3.5E-09 79.9 4.3 135 722-859 109-269 (314)
476 3b3j_A Histone-arginine methyl 97.3 2.5E-05 8.5E-10 89.4 -0.6 95 723-822 160-262 (480)
477 3reo_A (ISO)eugenol O-methyltr 97.3 3.3E-05 1.1E-09 84.8 0.3 95 719-823 201-300 (368)
478 2yxe_A Protein-L-isoaspartate 97.3 3.7E-05 1.3E-09 76.7 -0.1 90 723-825 79-179 (215)
479 4df3_A Fibrillarin-like rRNA/T 97.3 6.3E-05 2.2E-09 78.6 1.7 101 715-823 73-182 (233)
480 3p9c_A Caffeic acid O-methyltr 97.3 4.6E-05 1.6E-09 83.7 0.3 95 719-823 199-298 (364)
481 1fp2_A Isoflavone O-methyltran 97.2 6.8E-05 2.3E-09 81.4 1.3 96 718-823 185-288 (352)
482 2qy6_A UPF0209 protein YFCK; s 97.2 0.00034 1.2E-08 73.9 6.6 103 465-567 58-211 (257)
483 2oyr_A UPF0341 protein YHIQ; a 97.2 0.00025 8.7E-09 75.0 5.6 93 469-563 90-194 (258)
484 1wy7_A Hypothetical protein PH 97.2 0.00029 9.7E-09 69.8 5.5 114 723-844 51-171 (207)
485 2b25_A Hypothetical protein; s 97.2 7.5E-05 2.6E-09 80.5 1.2 91 723-824 107-220 (336)
486 1dl5_A Protein-L-isoaspartate 97.2 4.6E-05 1.6E-09 81.8 -0.6 93 723-825 77-177 (317)
487 4a6d_A Hydroxyindole O-methylt 97.2 0.00024 8.4E-09 77.6 5.1 137 717-860 175-347 (353)
488 1uir_A Polyamine aminopropyltr 97.2 0.00021 7.2E-09 77.1 4.4 136 722-860 78-243 (314)
489 2o07_A Spermidine synthase; st 97.2 0.00019 6.4E-09 77.3 3.8 136 722-859 96-256 (304)
490 2i7c_A Spermidine synthase; tr 97.2 0.00024 8.4E-09 75.4 4.6 136 722-859 79-239 (283)
491 4auk_A Ribosomal RNA large sub 97.1 0.0041 1.4E-07 69.2 14.3 85 465-562 209-296 (375)
492 2pbf_A Protein-L-isoaspartate 97.1 2.6E-05 8.8E-10 78.6 -3.0 93 723-824 82-194 (227)
493 3bzb_A Uncharacterized protein 97.1 0.00017 5.7E-09 76.2 2.9 118 723-845 81-234 (281)
494 3tma_A Methyltransferase; thum 97.1 0.00052 1.8E-08 74.7 6.5 135 718-858 200-353 (354)
495 2xyq_A Putative 2'-O-methyl tr 97.1 0.00068 2.3E-08 73.0 7.2 124 723-858 65-210 (290)
496 1zg3_A Isoflavanone 4'-O-methy 97.1 5.3E-05 1.8E-09 82.4 -1.4 96 718-823 190-293 (358)
497 1ne2_A Hypothetical protein TA 97.1 0.00024 8.1E-09 70.2 3.4 111 723-843 53-165 (200)
498 1jg1_A PIMT;, protein-L-isoasp 97.1 8E-05 2.7E-09 75.9 -0.1 90 722-825 92-191 (235)
499 2cmg_A Spermidine synthase; tr 97.1 0.00073 2.5E-08 71.3 7.1 125 722-860 73-217 (262)
500 3fzg_A 16S rRNA methylase; met 97.0 0.00015 5E-09 74.2 1.5 128 722-858 50-197 (200)
No 1
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.60 E-value=1.2e-14 Score=150.13 Aligned_cols=145 Identities=17% Similarity=0.242 Sum_probs=102.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEE-EcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISA-VMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~-v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..++. .+...+++.+.+ ..+...+|+++++||+|+|+.+ +
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~-l 113 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARA-FIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA-A 113 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC-G
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh-h
Confidence 36789999999999999999875 89999999999988874 445556554444 4456889999999999999864 7
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhc---ccccccchhHHHHHHHHHhhccceEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMS---NLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~---~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|..++..+|.++.|+|||||+|++....... .+.....+..+. ...+...+. .......+.++||.+..
T Consensus 114 ~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~aGf~~~~ 186 (260)
T 1vl5_A 114 HHFPNPASFVSEAYRVLKKGGQLLLVDNSAPE-NDAFDVFYNYVEKERDYSHHRAWK-KSDWLKMLEEAGFELEE 186 (260)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCS-SHHHHHHHHHHHHHHCTTCCCCCB-HHHHHHHHHHHTCEEEE
T ss_pred HhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCC-CHHHHHHHHHHHHhcCccccCCCC-HHHHHHHHHHCCCeEEE
Confidence 77789999999999999999999997433222 122222222111 111112222 22456677888998765
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.57 E-value=3.8e-15 Score=157.11 Aligned_cols=94 Identities=26% Similarity=0.316 Sum_probs=78.3
Q ss_pred CCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 468 TRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
..+|||||||+|.++..|+.+ +|+|+|+|+.|+..|. + .....+.+.+.+.+|+++++||+|+|+.+ +||.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~-----~-~~~v~~~~~~~e~~~~~~~sfD~v~~~~~-~h~~ 112 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL-----R-HPRVTYAVAPAEDTGLPPASVDVAIAAQA-MHWF 112 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC-----C-CTTEEEEECCTTCCCCCSSCEEEEEECSC-CTTC
T ss_pred CCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh-----h-cCCceeehhhhhhhcccCCcccEEEEeee-hhHh
Confidence 579999999999999999886 8999999999876543 1 22234455567899999999999999864 7886
Q ss_pred cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 546 IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 546 ~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+...++.++.|+|||||+|++..
T Consensus 113 -~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 113 -DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hHHHHHHHHHHHcCCCCEEEEEE
Confidence 58899999999999999999874
No 3
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.57 E-value=2.8e-14 Score=148.02 Aligned_cols=146 Identities=22% Similarity=0.244 Sum_probs=102.1
Q ss_pred CCCCEEEEECCCCchhHHHHhc---CCEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE---RDVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~---r~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+. ..|+|+|+++.++..++. .+...++. ..+...+...+|+++++||+|++..+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANA-RATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 4678999999999999988875 389999999999988774 34444543 34445556788999999999999864
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHH-HHHHhhc-ccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDV-EIWNAMS-NLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~-~~w~~~~-~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++..+...+|.++.|+|||||+|++............. ..+..+. .......+. .......+.++||.+..
T Consensus 139 -l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~aGf~~~~ 212 (273)
T 3bus_A 139 -LHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGG-IDEYESDVRQAELVVTS 212 (273)
T ss_dssp -TTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCC-HHHHHHHHHHTTCEEEE
T ss_pred -hhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCC-HHHHHHHHHHcCCeEEE
Confidence 777788899999999999999999998543222222211 1111111 111111222 23456678889998876
No 4
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.55 E-value=9e-14 Score=142.59 Aligned_cols=145 Identities=18% Similarity=0.213 Sum_probs=103.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEE-EEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAIS-AVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~-~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.|+..++. .+...+++.+. ...+...+|+++++||+|+|..+ +
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~-l 97 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASS-FAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA-A 97 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHH-HHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC-G
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc-h
Confidence 46789999999999999999875 89999999999988874 34445555444 44456789999999999999865 6
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhc---ccccccchhHHHHHHHHHhhccceEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMS---NLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~---~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
++..++..+|.++.|+|||||+|++........ ......+..+. ...+...+. .......+..+||.+..
T Consensus 98 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~aGf~~~~ 170 (239)
T 1xxl_A 98 HHFSDVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESS-LSEWQAMFSANQLAYQD 170 (239)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCB-HHHHHHHHHHTTEEEEE
T ss_pred hhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCC-HHHHHHHHHHCCCcEEE
Confidence 666788999999999999999999985433222 22222222211 111112222 33556778889998766
No 5
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=3.5e-14 Score=149.91 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=79.5
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC------CEEEEeCChhhHHHHHHHHHHHcCCC-cEEE-EcCcccCCCCCCceeEEE
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER------DVLTMSFAPKDEHDAQIQFALERGIP-AISA-VMGTKRLQFPRNVFDLVH 536 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r------~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~-v~dae~LPfpd~SFDlV~ 536 (870)
.+++.+|||||||+|.++..|+++ +|+|+|+|+.|+..|+.+.. ..+.. .+.+ ..+...+|++ .||+|+
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~-~~~~~~~v~~~~~D~~~~~~~--~~d~v~ 144 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHID-AYKAPTPVDVIEGDIRDIAIE--NASMVV 144 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHH-TSCCSSCEEEEESCTTTCCCC--SEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHH-hhccCceEEEeeccccccccc--ccccce
Confidence 356889999999999999888753 69999999999999885443 33332 3434 4456777774 599999
Q ss_pred ecccccccccCh--HHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 CARCRVPWHIDG--GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 Ss~~alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
|+. ++||..+. ..+|++++|+|||||+|+++...
T Consensus 145 ~~~-~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 145 LNF-TLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp EES-CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eee-eeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 986 47776543 57899999999999999998543
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.53 E-value=1.5e-13 Score=142.74 Aligned_cols=140 Identities=19% Similarity=0.249 Sum_probs=104.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++. .+...+++ ..+...+...+|+++++||+|+|+.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNR-NARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHH-HHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 46789999999999999999875 89999999999988874 44455554 34445566888999999999999865
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECC--CcCchhHHHHHHHh-hcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATP--VYQKLGEDVEIWNA-MSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p--~~~tL~El~~~w~~-~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++. ++..+|.++.|+|||||+|++.... ...........|.. ...+.. .......+.++||.+..
T Consensus 124 -~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 124 -IYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDT------IPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp -GGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEE------HHHHHHHHHHTTEEEEE
T ss_pred -ceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCC------HHHHHHHHHHCCCEEEE
Confidence 5555 7899999999999999999998532 12233445555632 211111 33456678899999876
No 7
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.53 E-value=1.2e-13 Score=141.85 Aligned_cols=141 Identities=16% Similarity=0.221 Sum_probs=103.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++. .+...++. ..+...+...+|+++++||+|+|+.+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNE-NAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 45779999999999999988764 89999999999988874 44555655 34445556888999999999999865
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECC--CcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATP--VYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p--~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++. +...+|.++.|+|||||+|+++.+. ...........|...- .. + + ........+.++||.+..
T Consensus 124 -l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-~-~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 124 -IYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAY--PE-I-S-VIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp -SCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHC--TT-C-C-BHHHHHHHHHHTTEEEEE
T ss_pred -Hhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhC--CC-C-C-CHHHHHHHHHHCCCeEEE
Confidence 5555 7899999999999999999998532 2223444555565321 11 1 1 133456678899998877
No 8
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.53 E-value=9e-14 Score=137.97 Aligned_cols=144 Identities=15% Similarity=0.162 Sum_probs=101.1
Q ss_pred CEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 469 RVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 469 ~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
.+|||||||+|.++..|+.. .|+++|+++.++..++.. +...++. ..+...+...+|+++++||+|+|+.+ ++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~-l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN-IADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGS-VF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESC-GG
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH-HHhccccCceEEEEcCHHHCCCCcccccEEEECch-Hh
Confidence 39999999999999888764 899999999999888754 3444443 34445566888999999999999864 67
Q ss_pred cccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHH-HHHhhc-----ccccccchhHHHHHHHHHhhccceEEE
Q 002884 544 WHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVE-IWNAMS-----NLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 544 w~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~-~w~~~~-----~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+..+...+|.++.|+|||||+|+++.......+.+... .+.... .....+.+.........+.++||.+..
T Consensus 123 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 123 FWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred hccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 67888999999999999999999986554443332211 111110 000112232334566778888987655
No 9
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.53 E-value=7.7e-16 Score=164.34 Aligned_cols=102 Identities=19% Similarity=0.252 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHc------CCCc-EEEEcCcccCC----CC--CC
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALER------GIPA-ISAVMGTKRLQ----FP--RN 530 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~er------gl~~-~~~v~dae~LP----fp--d~ 530 (870)
++.+|||||||+|.++..|+.. .|+++|+++.|+..++....... +... .+...+...++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999888753 89999999999988876554331 2223 34444556655 54 45
Q ss_pred ceeEEEecccccccc-cC---hHHHHHHHHhhcCCCcEEEEEE
Q 002884 531 VFDLVHCARCRVPWH-ID---GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 531 SFDlV~Ss~~alhw~-~D---~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+||+|+|+. ++||. .+ ...+|.++.|+|||||+|+++.
T Consensus 114 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 114 CFDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 999999986 58887 44 3699999999999999999984
No 10
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=6.1e-14 Score=143.84 Aligned_cols=142 Identities=13% Similarity=0.061 Sum_probs=98.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cE-EEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AI-SAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~-~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..++. .+...++. .+ +...+...+|+ +++||+|+|..+
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKR-RAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 46789999999999999888753 89999999999998874 44455653 34 44455677887 889999999754
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcC--chhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQ--KLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~--tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++..+...+|.++.|+|||||+|++..+.... ...+....|.. ... ..+.........+.++||.+..
T Consensus 113 -~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~l~~aGf~~~~ 183 (256)
T 1nkv_A 113 -TWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGV---SST-SDFLTLPGLVGAFDDLGYDVVE 183 (256)
T ss_dssp -GGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTC---SCG-GGSCCHHHHHHHHHTTTBCCCE
T ss_pred -hHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhc---ccc-cccCCHHHHHHHHHHCCCeeEE
Confidence 666678899999999999999999998532211 11222222221 111 0111233456677888887655
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.52 E-value=9.1e-14 Score=146.36 Aligned_cols=143 Identities=15% Similarity=0.205 Sum_probs=100.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++.. +...++. ..+...+...+|+++++||+|++..+
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY-NNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 46789999999999999888764 899999999999888744 3444542 34445556889999999999999865
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcCc--hhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQK--LGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~t--L~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++..++..+|.++.|+|||||+|++..+..... .......+.... ... +.........+..+||.+..
T Consensus 160 -l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~l~~aGf~~~~ 230 (297)
T 2o57_A 160 -FLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIK-LHD---MGSLGLYRSLAKECGLVTLR 230 (297)
T ss_dssp -GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHT-CSS---CCCHHHHHHHHHHTTEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhc-CCC---CCCHHHHHHHHHHCCCeEEE
Confidence 6666788999999999999999999985432221 111222222211 111 11122445678889998876
No 12
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.51 E-value=4.5e-14 Score=149.44 Aligned_cols=147 Identities=8% Similarity=-0.020 Sum_probs=93.2
Q ss_pred CCCCEEEEECCCCchhHHH----Hhc----CC--EEEEeCChhhHHHHHHHHHHHcCCCcEEEE--c-CcccC------C
Q 002884 466 KYTRVSLDVGCGVASFGGY----LFE----RD--VLTMSFAPKDEHDAQIQFALERGIPAISAV--M-GTKRL------Q 526 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~----La~----r~--VtgVDiSp~ml~~A~vq~A~ergl~~~~~v--~-dae~L------P 526 (870)
.++.+|||||||+|.++.. ++. .. ++++|+|+.|+..|+.+.+...+++++.+. . +...+ |
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3567999999999976543 322 22 399999999999887554433355544332 2 22333 3
Q ss_pred CCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHH-HHhhcccccccchhHHHHHHHHH
Q 002884 527 FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEI-WNAMSNLTVSMCWELVTIKMDKL 605 (870)
Q Consensus 527 fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~-w~~~~~la~~mcW~~va~~~~~L 605 (870)
|++++||+|+|+.+ +||..|+..+|.+++|+|||||+|++........+..+... |..+..... ............+
T Consensus 131 ~~~~~fD~V~~~~~-l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l 208 (292)
T 2aot_A 131 KELQKWDFIHMIQM-LYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDL-CQYITSDDLTQML 208 (292)
T ss_dssp TCCCCEEEEEEESC-GGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTT-CCCCCHHHHHHHH
T ss_pred cCCCceeEEEEeee-eeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCc-ccCCCHHHHHHHH
Confidence 67899999999864 88889999999999999999999999743221122221111 121111001 1111123456678
Q ss_pred hhccceEEE
Q 002884 606 NSAGFAIYR 614 (870)
Q Consensus 606 ~daGfaI~r 614 (870)
.++||.+..
T Consensus 209 ~~aGf~~~~ 217 (292)
T 2aot_A 209 DNLGLKYEC 217 (292)
T ss_dssp HHHTCCEEE
T ss_pred HHCCCceEE
Confidence 889997765
No 13
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.51 E-value=8.9e-14 Score=140.49 Aligned_cols=98 Identities=16% Similarity=0.082 Sum_probs=78.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|++. .|+|+|+++.++..|+..... ...+...+...+ +++++||+|+|..+ +++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~-~~~~~fD~v~~~~~-l~~ 115 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDA-QLPRRYDNIVLTHV-LEH 115 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC-CCSSCEEEEEEESC-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc-CcCCcccEEEEhhH-HHh
Confidence 4678999999999999999876 899999999988776532211 233344445555 57889999999864 777
Q ss_pred ccChHHHHHHHH-hhcCCCcEEEEEEC
Q 002884 545 HIDGGKLLLELN-RVLRPGGYFVWSAT 570 (870)
Q Consensus 545 ~~D~~~vL~Ei~-RVLKPGG~Lv~S~~ 570 (870)
..++..+|.++. |+|||||+|+++.+
T Consensus 116 ~~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 116 IDDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp CSSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hcCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 788999999999 99999999999853
No 14
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=4.5e-14 Score=144.43 Aligned_cols=135 Identities=17% Similarity=0.102 Sum_probs=95.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccC--CCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRL--QFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~L--Pfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+.. +|+|+|+++.++..+. ++ ..+...+...+ |+++++||+|+|+.+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~- 110 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCE-----GK---FNVVKSDAIEYLKSLPDKYLDGVMISHF- 110 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHH-----TT---SEEECSCHHHHHHTSCTTCBSEEEEESC-
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHH-----hh---cceeeccHHHHhhhcCCCCeeEEEECCc-
Confidence 45689999999999999888764 8999999999776554 22 23344444443 888999999999864
Q ss_pred cccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 542 VPWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 542 lhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++..+. ..+|.++.|+|||||+|++.. +....+......|.. ..+...+.. ......+..+||.+..
T Consensus 111 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~-~~l~~~l~~aGf~~~~ 180 (240)
T 3dli_A 111 VEHLDPERLFELLSLCYSKMKYSSYIVIES-PNPTSLYSLINFYID---PTHKKPVHP-ETLKFILEYLGFRDVK 180 (240)
T ss_dssp GGGSCGGGHHHHHHHHHHHBCTTCCEEEEE-ECTTSHHHHHHHTTS---TTCCSCCCH-HHHHHHHHHHTCEEEE
T ss_pred hhhCCcHHHHHHHHHHHHHcCCCcEEEEEe-CCcchhHHHHHHhcC---ccccccCCH-HHHHHHHHHCCCeEEE
Confidence 6666644 899999999999999999984 444455444443321 112122222 3456678889998776
No 15
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.51 E-value=1.5e-13 Score=140.91 Aligned_cols=100 Identities=18% Similarity=0.160 Sum_probs=82.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcE-EEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAI-SAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~-~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..+.... ..+.+.+ +...+...+|+++++||+|+++. ++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 114 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIPLPDESVHGVIVVH-LW 114 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCCCCCCCeeEEEECC-ch
Confidence 45789999999999999999875 8999999999988776433 2233334 44555678899999999999985 48
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
||..+...+|.++.|+|||||+|++.
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 88888999999999999999999987
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.50 E-value=1.5e-13 Score=142.95 Aligned_cols=147 Identities=18% Similarity=0.249 Sum_probs=102.8
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEE-EcCcccCCCCCCceeEEEecc
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISA-VMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~-v~dae~LPfpd~SFDlV~Ss~ 539 (870)
..++.+|||||||+|.++..|+.. .|+++|+++.++..++. .+...+++.+.+ ..+...+|+++++||+|+++.
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARE-NTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 346789999999999999888753 89999999999988874 444556554444 445678899999999999986
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEECCCc-----CchhHHHHHHHhhcc---cccccchhHHHHHHHHHhhccce
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVY-----QKLGEDVEIWNAMSN---LTVSMCWELVTIKMDKLNSAGFA 611 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~-----~tL~El~~~w~~~~~---la~~mcW~~va~~~~~L~daGfa 611 (870)
+ +++..++..+|.++.|+|||||+|++..+... .........|..+.. ......+. .......+.++||.
T Consensus 114 ~-l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~aGf~ 191 (276)
T 3mgg_A 114 V-LEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLV-GRQIYPLLQESGFE 191 (276)
T ss_dssp C-GGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTG-GGGHHHHHHHTTCE
T ss_pred h-hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcch-HHHHHHHHHHCCCC
Confidence 4 77778899999999999999999999753211 112223333322111 11111111 12345678889998
Q ss_pred EEE
Q 002884 612 IYR 614 (870)
Q Consensus 612 I~r 614 (870)
+..
T Consensus 192 ~v~ 194 (276)
T 3mgg_A 192 KIR 194 (276)
T ss_dssp EEE
T ss_pred eEE
Confidence 876
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.50 E-value=9.8e-14 Score=140.88 Aligned_cols=141 Identities=16% Similarity=0.141 Sum_probs=96.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..+.... ......+...+...+|+++++||+|+|..+ +++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~ 128 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFENEQFEAIMAINS-LEW 128 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCTTCEEEEEEESC-TTS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCCCCccEEEEcCh-Hhh
Confidence 4779999999999999999876 8999999999876665321 122334455566888999999999999864 777
Q ss_pred ccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc-cccccchhHHHHHHHHHhhccceEEE
Q 002884 545 HIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN-LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 545 ~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~-la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
..++..+|.++.|+|||||+|+++...... .... ..|..... ......+. .......+.++||.+..
T Consensus 129 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 129 TEEPLRALNEIKRVLKSDGYACIAILGPTA-KPRE-NSYPRLYGKDVVCNTMM-PWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp SSCHHHHHHHHHHHEEEEEEEEEEEECTTC-GGGG-GGGGGGGTCCCSSCCCC-HHHHHHHHHHTTEEEEE
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEEEcCCcc-hhhh-hhhhhhccccccccCCC-HHHHHHHHHHcCCEEEE
Confidence 788899999999999999999998532221 1111 11111111 01101111 22345678889998877
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.50 E-value=1.7e-13 Score=137.47 Aligned_cols=145 Identities=13% Similarity=0.132 Sum_probs=97.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++.... ....+...+...+|++ ++||+|+|+.+ +++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~-l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-TSIDTIVSTYA-FHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-SCCSEEEEESC-GGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-CCeEEEEECcc-hhc
Confidence 5789999999999999999875 89999999998876653321 1233444556788888 89999999864 777
Q ss_pred ccChHH--HHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhc--------ccccccchhHHHHHHHHHhhccceEEE
Q 002884 545 HIDGGK--LLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMS--------NLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 545 ~~D~~~--vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~--------~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
..+... +|.++.|+|||||+|++..+. ..........+..+. .......+.........+.++||.+..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 119 LTDDEKNVAIAKYSQLLNKGGKIVFADTI-FADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp SCHHHHHHHHHHHHHHSCTTCEEEEEEEC-BSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred CChHHHHHHHHHHHHhcCCCCEEEEEecc-ccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 776655 999999999999999998533 222222221111110 000011111233566788999998877
Q ss_pred ecCc
Q 002884 615 KPTT 618 (870)
Q Consensus 615 kgf~ 618 (870)
....
T Consensus 198 ~~~~ 201 (220)
T 3hnr_A 198 TRLN 201 (220)
T ss_dssp EECS
T ss_pred eecc
Confidence 4443
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=1.4e-13 Score=147.10 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=100.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+++ .|+|+|+++.++..|+. .+...++. ..+...+...+|+++++||+|+|+.+
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNR-RARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 46789999999999999888764 89999999999988874 44455654 34445566888999999999999865
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++. +...+|.++.|+|||||+|++.+.............+..+...... .+.........+.++||.+..
T Consensus 195 -l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~l~~aGf~~~~ 265 (312)
T 3vc1_A 195 -TMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFEC-NIHSRREYLRAMADNRLVPHT 265 (312)
T ss_dssp -GGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTC-CCCBHHHHHHHHHTTTEEEEE
T ss_pred -hhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcC-CCCCHHHHHHHHHHCCCEEEE
Confidence 6655 6899999999999999999998533222111111112111111100 111133556778899998776
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.49 E-value=5.5e-14 Score=144.22 Aligned_cols=144 Identities=16% Similarity=0.128 Sum_probs=96.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..+...... . ....+...+...+|+++++||+|+|..+ +
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 130 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG-N-NKIIFEANDILTKEFPENNFDLIYSRDA-I 130 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS-C-TTEEEEECCTTTCCCCTTCEEEEEEESC-G
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc-C-CCeEEEECccccCCCCCCcEEEEeHHHH-H
Confidence 46789999999999999888764 899999999987766532111 1 2234445566788999999999999864 6
Q ss_pred ccc--cChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 543 PWH--IDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 543 hw~--~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
++. .+...+|.++.|+|||||+|++....... .......+.......+ ............+..+||.+..
T Consensus 131 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 131 LALSLENKNKLFQKCYKWLKPTGTLLITDYCATE-KENWDDEFKEYVKQRK-YTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC-GGGCCHHHHHHHHHHT-CCCCCHHHHHHHHHHTTCEEEE
T ss_pred HhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC-cccchHHHHHHHhcCC-CCCCCHHHHHHHHHHcCCeEEE
Confidence 666 67799999999999999999998532222 1111111211111011 1111133456678889998766
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=1.4e-13 Score=136.55 Aligned_cols=133 Identities=17% Similarity=0.120 Sum_probs=95.3
Q ss_pred CCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 468 TRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
+.+|||||||+|.++..|+.. .|+|+|+++.|+..++. +.....+...+...+|+++++||+|+|..+ +++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQ-----THPSVTFHHGTITDLSDSPKRWAGLLAWYS-LIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHH-----HCTTSEEECCCGGGGGGSCCCEEEEEEESS-STTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHH-----hCCCCeEEeCcccccccCCCCeEEEEehhh-HhcC
Confidence 679999999999999999876 89999999998766553 233344455566788898999999999865 5555
Q ss_pred c--ChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhccc-ccccchhHHHHHHHHHhhccceEEEe
Q 002884 546 I--DGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNL-TVSMCWELVTIKMDKLNSAGFAIYRK 615 (870)
Q Consensus 546 ~--D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~l-a~~mcW~~va~~~~~L~daGfaI~rk 615 (870)
. +...+|.++.|+|||||+|+++...... .. .+... .....+. .......+.++||.+...
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~~-------~~~~~~~~~~~~~-~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 116 GPGELPDALVALRMAVEDGGGLLMSFFSGPS-LE-------PMYHPVATAYRWP-LPELAQALETAGFQVTSS 179 (203)
T ss_dssp CTTTHHHHHHHHHHTEEEEEEEEEEEECCSS-CE-------EECCSSSCEEECC-HHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEEccCCc-hh-------hhhchhhhhccCC-HHHHHHHHHHCCCcEEEE
Confidence 4 6799999999999999999998533221 11 11110 1111122 235566788899998873
No 22
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.47 E-value=6.1e-14 Score=143.43 Aligned_cols=139 Identities=15% Similarity=0.154 Sum_probs=93.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++..... . ....+...+...+|+++++||+|+|..+ +
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 168 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-M-PVGKFILASMETATLPPNTYDLIVIQWT-A 168 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-S-SEEEEEESCGGGCCCCSSCEEEEEEESC-G
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-C-CceEEEEccHHHCCCCCCCeEEEEEcch-h
Confidence 45789999999999999888764 699999999988777643221 1 1223344456778898999999999865 6
Q ss_pred ccc--cChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEEe
Q 002884 543 PWH--IDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYRK 615 (870)
Q Consensus 543 hw~--~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~rk 615 (870)
++. .+...+|.++.|+|||||+|++.......... + .........+ ........+.++||.+.+.
T Consensus 169 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----~--~~~~~~~~~~-~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 169 IYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRF-----L--VDKEDSSLTR-SDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCE-----E--EETTTTEEEB-CHHHHHHHHHHHTCCEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccc-----e--ecccCCcccC-CHHHHHHHHHHCCCEEEEe
Confidence 655 34689999999999999999998532111000 0 0000111111 1234566778899988773
No 23
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=2.7e-13 Score=141.94 Aligned_cols=141 Identities=16% Similarity=0.211 Sum_probs=99.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..++... ....+...+...+|+ +++||+|+|+. +++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~ 128 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV-DKPLDAVFSNA-MLH 128 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-SSCEEEEEEES-CGG
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-CCCcCEEEEcc-hhh
Confidence 35789999999999999988764 8999999999887765321 223455666677887 57899999986 488
Q ss_pred cccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--------cccccchhHHHHHHHHHhhccceEEE
Q 002884 544 WHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--------LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 544 w~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--------la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
|..++..+|.++.|+|||||+|++.. +....+......+..... ......+.........+..+||.+..
T Consensus 129 ~~~d~~~~l~~~~~~LkpgG~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 206 (279)
T 3ccf_A 129 WVKEPEAAIASIHQALKSGGRFVAEF-GGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTY 206 (279)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEE-ECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEE
T ss_pred hCcCHHHHHHHHHHhcCCCcEEEEEe-cCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEE
Confidence 88899999999999999999999984 333344444333322110 11111111233456678889998866
No 24
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.47 E-value=1.5e-13 Score=140.71 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=94.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.......+....+...+...+++++++||+|+|..+ ++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV-IG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC-GG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcch-hh
Confidence 5789999999999999988765 7999999999988876443222111223444556778888889999999864 66
Q ss_pred cccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 544 WHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 544 w~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+..+. ..+|.++.|+|||||+|++.+..... ...|.. ....... ........+.++||.+..
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-----~~~~~~---~~~~~~~-~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-----GVILDD---VDSSVCR-DLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-----SEEEET---TTTEEEE-BHHHHHHHHHHTTCCEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-----cceecc---cCCcccC-CHHHHHHHHHHcCCeEEE
Confidence 66554 48999999999999999998532221 000111 1111111 233456678889998877
No 25
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.46 E-value=4.3e-13 Score=134.77 Aligned_cols=104 Identities=23% Similarity=0.295 Sum_probs=82.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC------CcEEEEcCcccCCCCCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI------PAISAVMGTKRLQFPRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl------~~~~~v~dae~LPfpd~SFDlV~Ss 538 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++. .+...++ ...+...+...+++++++||+|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAET-AARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHH-HHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 5789999999999999999875 89999999998877763 3333333 1234455567889999999999998
Q ss_pred ccccccccChH---HHHHHHHhhcCCCcEEEEEECCC
Q 002884 539 RCRVPWHIDGG---KLLLELNRVLRPGGYFVWSATPV 572 (870)
Q Consensus 539 ~~alhw~~D~~---~vL~Ei~RVLKPGG~Lv~S~~p~ 572 (870)
.+ +++..++. .+|.++.|+|||||+|++.....
T Consensus 109 ~~-l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 109 AF-LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp SC-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred ch-hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 54 66666766 89999999999999999985433
No 26
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.46 E-value=6.9e-13 Score=139.82 Aligned_cols=115 Identities=14% Similarity=0.160 Sum_probs=88.0
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRL 525 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~L 525 (870)
+..++...+.. ..++.+|||||||+|.++..|++. .|+|+|+++.++..++.. +...+....+.+.+...+
T Consensus 9 ~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~v~~~~~d~~~~ 84 (284)
T 3gu3_A 9 YVSFLVNTVWK---ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL-FRLLPYDSEFLEGDATEI 84 (284)
T ss_dssp HHHHHHHTTSC---CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHH-HHSSSSEEEEEESCTTTC
T ss_pred HHHHHHHHHhc---cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEEcchhhc
Confidence 44555444322 346789999999999999998763 799999999998887743 333344344455566778
Q ss_pred CCCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 526 QFPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 526 Pfpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
|++ ++||+|+|..+ +++..+...+|.+++|+|||||+|++..+.
T Consensus 85 ~~~-~~fD~v~~~~~-l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 85 ELN-DKYDIAICHAF-LLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CCS-SCEEEEEEESC-GGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CcC-CCeeEEEECCh-hhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 884 68999999864 777788999999999999999999998554
No 27
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.45 E-value=6.7e-13 Score=132.97 Aligned_cols=136 Identities=20% Similarity=0.157 Sum_probs=97.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcE-EEEcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAI-SAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~-~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..++... ...+++.+ +...+...+++++++||+|+++.
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKV-NKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH-HHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHH-HHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 3578999999999998888764 37999999999998887544 44455444 44455678889999999999986
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+ +++..+...+|.++.|+|||||+|++........... ..... .+ ........+..+||.+.+
T Consensus 115 ~-l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--------~~~~~--~~-~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 115 T-FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKG--------PPPEE--VY-SEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp C-GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS--------CCGGG--SC-CHHHHHHHHHHTTCEEEE
T ss_pred h-hhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccC--------Cchhc--cc-CHHHHHHHHHHCCCEEEE
Confidence 5 6777888999999999999999999985322211000 00001 11 122445667888998776
No 28
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.45 E-value=4.1e-13 Score=140.77 Aligned_cols=102 Identities=22% Similarity=0.266 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC-CcEE-EEcCcccCC-CCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI-PAIS-AVMGTKRLQ-FPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl-~~~~-~v~dae~LP-fpd~SFDlV~Ss~~a 541 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|+. .+...++ +.+. ...+...++ +++++||+|+|..+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~- 145 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQ-AAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV- 145 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC-
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHH-HHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch-
Confidence 3679999999999999999875 89999999999988874 3444455 3444 444556676 78899999999864
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++..++..+|.++.|+|||||+|++...
T Consensus 146 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 77778899999999999999999999843
No 29
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.44 E-value=5.5e-13 Score=135.21 Aligned_cols=102 Identities=18% Similarity=0.228 Sum_probs=78.8
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccc
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
..++.+|||||||+|.++..|+.. .|+|+|+++.++..++... ...+ ...+...+...++++ ++||+|+|+.+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~-~~~~~~~d~~~~~~~-~~fD~v~~~~~ 118 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRF-RGNL-KVKYIEADYSKYDFE-EKYDMVVSALS 118 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHT-CSCT-TEEEEESCTTTCCCC-SCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhh-ccCC-CEEEEeCchhccCCC-CCceEEEEeCc
Confidence 345789999999999999888764 8999999999887776332 1122 334445556788877 89999999864
Q ss_pred ccccccChH--HHHHHHHhhcCCCcEEEEEEC
Q 002884 541 RVPWHIDGG--KLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 541 alhw~~D~~--~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++..+.. .+|.++.|+|||||+|++++.
T Consensus 119 -l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 119 -IHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp -GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 66665554 599999999999999999853
No 30
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=8e-13 Score=135.53 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=80.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.|+..+... .....+...+...+| ++++||+|+|+. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~ 104 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-PAQKADLLYANA-V 104 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-CSSCEEEEEEES-C
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-ccCCcCEEEEeC-c
Confidence 4578999999999999888875 3899999999988766532 223445555667777 788999999986 4
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+||..+...+|.++.|+|||||+|+++.+
T Consensus 105 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 105 FQWVPDHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp GGGSTTHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhhCCCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 88888899999999999999999999854
No 31
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=9.4e-13 Score=139.40 Aligned_cols=100 Identities=15% Similarity=0.234 Sum_probs=81.1
Q ss_pred CCCEEEEECCCCchhHHHHh---cC--CEEEEeCChhhHHHHHHHHHHH-cCCC-cEEEEcCcccCCCCC------Ccee
Q 002884 467 YTRVSLDVGCGVASFGGYLF---ER--DVLTMSFAPKDEHDAQIQFALE-RGIP-AISAVMGTKRLQFPR------NVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La---~r--~VtgVDiSp~ml~~A~vq~A~e-rgl~-~~~~v~dae~LPfpd------~SFD 533 (870)
++.+|||||||+|.++..|+ .. .|+|+|+++.++..|+...... .+.+ ..+...+...+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 67899999999999999998 33 8999999999998887544432 1223 344555667888877 8999
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+|+|+.+ +||. +...+|.++.|+|||||+|++.
T Consensus 116 ~V~~~~~-l~~~-~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 116 MITAVEC-AHWF-DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEESC-GGGS-CHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeHhhH-HHHh-CHHHHHHHHHHhcCCCcEEEEE
Confidence 9999864 7777 8999999999999999999983
No 32
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.43 E-value=1.6e-12 Score=137.72 Aligned_cols=100 Identities=14% Similarity=0.210 Sum_probs=78.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEE-EEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AIS-AVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~-~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|++. +|+|+|+++.++..|+. .+...+++ .+. ...+...+ +++||+|+|+.+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~ 146 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKA-MFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGA 146 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESC
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECCHHHc---CCCccEEEEcch
Confidence 46789999999999999888764 89999999999988874 44455654 333 34444444 789999999865
Q ss_pred ccccccCh---------HHHHHHHHhhcCCCcEEEEEEC
Q 002884 541 RVPWHIDG---------GKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 541 alhw~~D~---------~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++..++ ..+|.++.|+|||||+|++...
T Consensus 147 -~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 147 -FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp -GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred -HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 6666443 7999999999999999999853
No 33
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.43 E-value=4.4e-13 Score=148.10 Aligned_cols=166 Identities=19% Similarity=0.173 Sum_probs=111.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHc----C-C--CcEEE-EcCcccC------CC
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALER----G-I--PAISA-VMGTKRL------QF 527 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~er----g-l--~~~~~-v~dae~L------Pf 527 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|+....... | . +.+.+ ..+...+ |+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 5789999999999988877652 89999999999988775443321 2 1 33444 4455665 89
Q ss_pred CCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHH----HHHhhcccccccchhHHHHHHH
Q 002884 528 PRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVE----IWNAMSNLTVSMCWELVTIKMD 603 (870)
Q Consensus 528 pd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~----~w~~~~~la~~mcW~~va~~~~ 603 (870)
++++||+|+++. ++++..+...+|.++.|+|||||+|+++.......+..... .|... ....+.+ .....
T Consensus 163 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~ 236 (383)
T 4fsd_A 163 PDSSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGEC--LGGALYL---EDFRR 236 (383)
T ss_dssp CTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTT--CTTCCBH---HHHHH
T ss_pred CCCCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcc--cccCCCH---HHHHH
Confidence 999999999985 58888889999999999999999999985443333333222 12211 1111222 24466
Q ss_pred HHhhccceEEEecCchhHHhhhcCCCCCCCCCCCCCCCcccCCcccccccCCCc
Q 002884 604 KLNSAGFAIYRKPTTNECYEKRNQMTPPMCQNEEDPNAAWYVPLQACVHRVPVD 657 (870)
Q Consensus 604 ~L~daGfaI~rkgf~~sCy~~r~~~~pplC~~d~d~~~~WY~~l~aci~~L~~~ 657 (870)
.+.++||.+.+-- +..+....|..+..+|.++..+
T Consensus 237 ll~~aGF~~v~~~-------------------~~~~~~~~~~~~~~~l~~~~~~ 271 (383)
T 4fsd_A 237 LVAEAGFRDVRLV-------------------SVGPVDVSDPQLRKLVPDVQFY 271 (383)
T ss_dssp HHHHTTCCCEEEE-------------------EEEEECCCCHHHHTTSTTCCEE
T ss_pred HHHHCCCceEEEE-------------------eccccccCCHhHHHHhcCCcee
Confidence 7888999765511 1223445566666777766655
No 34
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.42 E-value=1.3e-13 Score=139.02 Aligned_cols=101 Identities=7% Similarity=-0.135 Sum_probs=76.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHH------------cCCCcEEEEcCcccCCCCC-Cc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALE------------RGIPAISAVMGTKRLQFPR-NV 531 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~e------------rgl~~~~~v~dae~LPfpd-~S 531 (870)
++.+|||+|||+|.++..|++. .|+|+|+|+.|+..|+.+.... ......+.+.+...+|+++ ++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 5789999999999999999864 8999999999998876432210 1223455566778888875 89
Q ss_pred eeEEEecccccccccC--hHHHHHHHHhhcCCCcEEEEE
Q 002884 532 FDLVHCARCRVPWHID--GGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 532 FDlV~Ss~~alhw~~D--~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
||+|++..+ +++... ...++.+++|+|||||++++.
T Consensus 102 fD~v~~~~~-l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 102 CAAFYDRAA-MIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp EEEEEEESC-GGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEECcc-hhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 999999754 554432 357899999999999985544
No 35
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.42 E-value=1.1e-12 Score=131.92 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-----cEE-EEcCcccCCCCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-----AIS-AVMGTKRLQFPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-----~~~-~v~dae~LPfpd~SFDlV~ 536 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++... ...+++ .+. ...+...++++.++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERL-DRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHH-TTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHH-HHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 5789999999999999999864 7999999999998887433 333332 233 4444566667778999999
Q ss_pred ecccccccccCh--HHHHHHHHhhcCCCcEEEEE
Q 002884 537 CARCRVPWHIDG--GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 537 Ss~~alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S 568 (870)
|+.+ +++..++ ..+|.++.|+|||||+|+++
T Consensus 108 ~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 108 VIEV-IEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred eHHH-HHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 9864 6666644 79999999999999987776
No 36
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.41 E-value=1.8e-12 Score=130.96 Aligned_cols=137 Identities=20% Similarity=0.252 Sum_probs=95.3
Q ss_pred CCEEEEECCCCchhHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccccC
Q 002884 468 TRVSLDVGCGVASFGGYLFERDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWHID 547 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~~D 547 (870)
+.+|||||||+|.++..|+.. +++|+++.++..++. ++ ..+...+...+|+++++||+|++..+ +++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~s~~~~~~a~~-----~~--~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEPSERMAEIARK-----RG--VFVLKGTAENLPLKDESFDFALMVTT-ICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEESCHHHHHHHHH-----TT--CEEEECBTTBCCSCTTCEEEEEEESC-GGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCCCHHHHHHHHh-----cC--CEEEEcccccCCCCCCCeeEEEEcch-HhhccC
Confidence 679999999999999999887 999999998766553 23 34455566778888899999999864 777788
Q ss_pred hHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 548 GGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 548 ~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+..+|.++.++|+|||+|+++.+........................+.........+..+||.+..
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~ 184 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFK 184 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEE
Confidence 8999999999999999999985443222211111110000000111111233566778889998876
No 37
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=3e-13 Score=140.64 Aligned_cols=108 Identities=17% Similarity=0.115 Sum_probs=82.9
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFP 528 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfp 528 (870)
+.+.+...++ ..++.+|||||||+|.++..|++. .|+|+|+++.|+..+. .+. ...+.+.+...+|++
T Consensus 22 ~~~~l~~~~~----~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-----~~~-~~~~~~~d~~~~~~~ 91 (261)
T 3ege_A 22 IVNAIINLLN----LPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-----VHP-QVEWFTGYAENLALP 91 (261)
T ss_dssp HHHHHHHHHC----CCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-----CCT-TEEEECCCTTSCCSC
T ss_pred HHHHHHHHhC----CCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-----hcc-CCEEEECchhhCCCC
Confidence 4444444433 246789999999999999999875 8999999998765443 222 334444556889999
Q ss_pred CCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 529 RNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 529 d~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++||+|+|..+ +++..+...+|.+++|+|| ||++++...
T Consensus 92 ~~~fD~v~~~~~-l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 92 DKSVDGVISILA-IHHFSHLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp TTCBSEEEEESC-GGGCSSHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CCCEeEEEEcch-HhhccCHHHHHHHHHHHhC-CcEEEEEEc
Confidence 999999999865 6667889999999999999 998777643
No 38
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.41 E-value=3.7e-13 Score=139.07 Aligned_cols=114 Identities=16% Similarity=0.112 Sum_probs=81.7
Q ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcc--
Q 002884 449 LHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTK-- 523 (870)
Q Consensus 449 ~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae-- 523 (870)
..+...+.+.+. .++.+|||||||+|.++.+|++. .|++||+++.++..|+. .+...+....+...+..
T Consensus 47 ~~~m~~~a~~~~-----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~-~~~~~~~~~~~~~~~a~~~ 120 (236)
T 3orh_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHHhhc-----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHH-HHhhCCCceEEEeehHHhh
Confidence 344455555443 36889999999999999999875 79999999999888773 44444443333444432
Q ss_pred cCCCCCCceeEEEecc----cccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 524 RLQFPRNVFDLVHCAR----CRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 524 ~LPfpd~SFDlV~Ss~----~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
..++++++||.|++-. ..+++..+...++.+++|+|||||+|+|.
T Consensus 121 ~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 121 APTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred cccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 3468899999997521 11223355689999999999999999985
No 39
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.41 E-value=7.3e-13 Score=136.06 Aligned_cols=100 Identities=15% Similarity=0.239 Sum_probs=82.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++.... .....+...+...+|+++++||+|+|+. ++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 118 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSL-AL 118 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEES-CG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEch-hh
Confidence 36789999999999999999875 79999999998877653222 2233445556688899999999999986 47
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++..+...+|.++.|+|||||+|+++.
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 119 HYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 777889999999999999999999984
No 40
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.41 E-value=1.8e-12 Score=129.30 Aligned_cols=98 Identities=24% Similarity=0.241 Sum_probs=80.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC-CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
++.+|||||||+|.++..| .. .|+++|+++.|+..++... ....+...+...+|+++++||+|++.. .+++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVVLLFT-TLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEEEEES-CTTTC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEEEEcC-hhhhc
Confidence 5789999999999999988 66 8999999999887665322 223444455678899999999999985 47777
Q ss_pred cChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 546 IDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 546 ~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
.++..+|.++.|+|||||+|+++.+.
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecC
Confidence 88999999999999999999998543
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.41 E-value=1.1e-12 Score=131.20 Aligned_cols=131 Identities=20% Similarity=0.227 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++... ++ .+...+...++ ++++||+|+|+.+ +++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~----~~--~~~~~d~~~~~-~~~~fD~v~~~~~-l~~ 114 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL----GR--PVRTMLFHQLD-AIDAYDAVWAHAC-LLH 114 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----TS--CCEECCGGGCC-CCSCEEEEEECSC-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----CC--ceEEeeeccCC-CCCcEEEEEecCc-hhh
Confidence 4779999999999999999876 8999999999887776433 32 33455566777 7889999999865 555
Q ss_pred cc--ChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhcc-ceEEE
Q 002884 545 HI--DGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAG-FAIYR 614 (870)
Q Consensus 545 ~~--D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daG-faI~r 614 (870)
.. +...+|.++.|+|||||+|+++.......... .................+.++| |.+..
T Consensus 115 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 115 VPRDELADVLKLIWRALKPGGLFYASYKSGEGEGRD---------KLARYYNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEEC---------TTSCEECCCCHHHHHHHHHHHCCCSEEE
T ss_pred cCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccccc---------ccchhccCCCHHHHHHHHHhCCCcEEEE
Confidence 55 56799999999999999999985443322111 0000011111234566778889 88776
No 42
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.40 E-value=8.3e-13 Score=132.26 Aligned_cols=102 Identities=18% Similarity=0.278 Sum_probs=79.7
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
..++.+|||||||+|.++..|+.. .|+|+|+++.++..++..... .+ ...+...+...++ ++++||+|+|+.+ +
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~-~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~-l 124 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR-WS-HISWAATDILQFS-TAELFDLIVVAEV-L 124 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-CS-SEEEEECCTTTCC-CSCCEEEEEEESC-G
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-CC-CeEEEEcchhhCC-CCCCccEEEEccH-H
Confidence 345789999999999999999886 899999999988877643221 11 2344455566776 6789999999864 7
Q ss_pred ccccCh---HHHHHHHHhhcCCCcEEEEEEC
Q 002884 543 PWHIDG---GKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 543 hw~~D~---~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
++..++ ..+|.++.|+|||||+|+++.+
T Consensus 125 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 125 YYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp GGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 777766 5779999999999999999843
No 43
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.40 E-value=2.7e-12 Score=134.41 Aligned_cols=100 Identities=14% Similarity=0.154 Sum_probs=77.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc---CCEEEEeCChhhHHHHHHHHHHHcCCC-cEE-EEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE---RDVLTMSFAPKDEHDAQIQFALERGIP-AIS-AVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~---r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~-~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+. ..|+|+|+++.++..++.. +...++. .+. ...+...+| ++||+|+|..+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~ 138 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQL-VANSENLRSKRVLLAGWEQFD---EPVDRIVSIGA 138 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTCCCCSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHhcCCCCCeEEEECChhhCC---CCeeEEEEeCc
Confidence 4678999999999999988874 3899999999998887743 3334432 333 344455555 78999999865
Q ss_pred ccccc--cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 541 RVPWH--IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 541 alhw~--~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++. .+...+|.++.|+|||||+|++...
T Consensus 139 -l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 139 -FEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp -GGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred -hhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 5555 5678999999999999999999853
No 44
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.39 E-value=5.5e-13 Score=140.04 Aligned_cols=102 Identities=12% Similarity=-0.009 Sum_probs=77.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHH-----------------HcCCCcEEEEcCcccCC
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFAL-----------------ERGIPAISAVMGTKRLQ 526 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~-----------------ergl~~~~~v~dae~LP 526 (870)
.++.+|||+|||+|..+..|++. .|+|+|+|+.|+..|+.+... ..+....+.+.+...++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 35789999999999999999876 899999999999877533221 01223445556677888
Q ss_pred CCC-CceeEEEeccccccccc--ChHHHHHHHHhhcCCCcEEEEE
Q 002884 527 FPR-NVFDLVHCARCRVPWHI--DGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 527 fpd-~SFDlV~Ss~~alhw~~--D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+++ ++||+|++..+ +++.. +...++.++.|+|||||+|++.
T Consensus 147 ~~~~~~FD~V~~~~~-l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 147 RANIGKFDRIWDRGA-LVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGCCCCEEEEEESSS-TTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhh-hhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 764 89999998754 44443 2368999999999999999755
No 45
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=1.5e-12 Score=133.26 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccC
Q 002884 449 LHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRL 525 (870)
Q Consensus 449 ~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~L 525 (870)
..+...+...++ .++.+|||||||+|.++..|+.. .|+|+|+++.|+..|+. .+...+....+...+...+
T Consensus 47 ~~~~~~l~~~~~-----~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~v~~~~~d~~~~ 120 (236)
T 1zx0_A 47 TPYMHALAAAAS-----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRD-WAPRQTHKVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHHT-----TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHH-HGGGCSSEEEEEESCHHHH
T ss_pred HHHHHHHHhhcC-----CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHH-HHHhcCCCeEEEecCHHHh
Confidence 344454444432 35789999999999999999774 79999999999988874 3333343233344445666
Q ss_pred --CCCCCceeEEEe-cccccccc----cChHHHHHHHHhhcCCCcEEEEE
Q 002884 526 --QFPRNVFDLVHC-ARCRVPWH----IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 526 --Pfpd~SFDlV~S-s~~alhw~----~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
|+++++||+|++ .+. ++.+ .+...+|.+++|+|||||+|++.
T Consensus 121 ~~~~~~~~fD~V~~d~~~-~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 121 APTLPDGHFDGILYDTYP-LSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp GGGSCTTCEEEEEECCCC-CBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred hcccCCCceEEEEECCcc-cchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 899999999999 433 2211 12247799999999999999986
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.39 E-value=2e-12 Score=128.73 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=78.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. +|+|+|+++.++..++. .+.+.+.++. +...+ +++++||+|+|+.+ +
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-----~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~-l 117 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR-----HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHW-L 117 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG-----GCCTTEEEEECCTTSC-CCSSCEEEEEEESC-G
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh-----cCCCCeEEEecccccC-CCCCceeEEEEech-h
Confidence 35679999999999999988764 89999999998766653 5545555544 45555 78899999999864 6
Q ss_pred ccccCh--HHHHHHHHhhcCCCcEEEEEECC
Q 002884 543 PWHIDG--GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 543 hw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
++..+. ..+|.++.|+|||||+|++....
T Consensus 118 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 118 AHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 666664 89999999999999999998543
No 47
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.39 E-value=1.4e-12 Score=129.45 Aligned_cols=102 Identities=18% Similarity=0.182 Sum_probs=79.6
Q ss_pred CCCCEEEEECCCCchhH-HHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFG-GYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a-~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++ ..+... .|+|+|+++.|+..++... ...+....+...+...+|+++++||+|+|..+ +
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFS-RENNFKLNISKGDIRKLPFKDESMSFVYSYGT-I 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHH-HHHTCCCCEEECCTTSCCSCTTCEEEEEECSC-G
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH-HhcCCceEEEECchhhCCCCCCceeEEEEcCh-H
Confidence 35789999999999874 444433 8999999999998887443 33444445556667788998999999999854 5
Q ss_pred ccc--cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWH--IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~--~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++. .+...+|.++.|+|||||+|++..
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 544 456899999999999999999984
No 48
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.38 E-value=1.8e-12 Score=130.31 Aligned_cols=100 Identities=11% Similarity=0.077 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC------CcEEEEcCcccCCCCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI------PAISAVMGTKRLQFPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl------~~~~~v~dae~LPfpd~SFDlV~ 536 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++.... ..++ ...+...+...+++++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLK-IDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHT-GGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHH-hhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 5789999999999999999863 79999999999988875432 2232 23344445567777788999999
Q ss_pred ecccccccccCh--HHHHHHHHhhcCCCcEEEEE
Q 002884 537 CARCRVPWHIDG--GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 537 Ss~~alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S 568 (870)
|+.+ +++..++ ..+|.++.|+|||||+|++.
T Consensus 108 ~~~~-l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 108 VIEV-IEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EESC-GGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EHHH-HHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 9864 6666544 68999999999999977765
No 49
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=2.9e-12 Score=125.56 Aligned_cols=104 Identities=12% Similarity=0.115 Sum_probs=76.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCC-CCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQ-FPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LP-fpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+.+ .|+|+|+++.|+..|+.. +...+++.+.++.+ ...++ +.+++||+|+++...
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~-~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQR-LSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 35789999999999999999875 899999999999988744 44455555555544 34433 557889999987433
Q ss_pred ccc-------c-cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 542 VPW-------H-IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 542 lhw-------~-~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
++. . .+...+|.++.|+|||||+|++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 332 1 2235788999999999999999853
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=3.4e-12 Score=128.02 Aligned_cols=103 Identities=23% Similarity=0.283 Sum_probs=80.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccc-cc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCR-VP 543 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~a-lh 543 (870)
++.+|||||||+|.++..|+.. +|+++|+++.++..++... ...+....+...+...+++++++||+|+|+.+. ++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYA-KSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 3789999999999999988876 8999999999998887543 333434455555667788888899999998542 22
Q ss_pred cccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 544 WHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 544 w~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+..+...+|.++.++|||||+|++..+
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 224568899999999999999999843
No 51
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=1.4e-12 Score=135.39 Aligned_cols=98 Identities=22% Similarity=0.325 Sum_probs=81.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.|+..++.. ... .+...+...+|+++++||+|+|...++|+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-----~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREK-----GVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHH-----TCS-CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhh-----cCC-CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 5789999999999999999876 899999999988776532 212 25556677889999999999997666777
Q ss_pred ccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 545 HIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 545 ~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
..++..+|.++.|+|||||+|++..+
T Consensus 128 ~~~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 128 VENKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccHHHHHHHHHHHcCCCeEEEEEeC
Confidence 67789999999999999999999853
No 52
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=1.3e-12 Score=136.97 Aligned_cols=117 Identities=21% Similarity=0.178 Sum_probs=87.8
Q ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcC----CCcEEEEcCc
Q 002884 449 LHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERG----IPAISAVMGT 522 (870)
Q Consensus 449 ~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~erg----l~~~~~v~da 522 (870)
..+.++|...+.. .++.+|||||||+|.++..|+.. .|+|+|+++.|+..|+.+...... ....+...+.
T Consensus 43 ~~~~~~l~~~l~~----~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~ 118 (293)
T 3thr_A 43 AEYKAWLLGLLRQ----HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANW 118 (293)
T ss_dssp HHHHHHHHHHHHH----TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCG
T ss_pred HHHHHHHHHHhcc----cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecCh
Confidence 3455666665543 25689999999999999999876 899999999999888754322111 1123344455
Q ss_pred ccCC---CCCCceeEEEecccccccccC-------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 523 KRLQ---FPRNVFDLVHCARCRVPWHID-------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 523 e~LP---fpd~SFDlV~Ss~~alhw~~D-------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
..+| +++++||+|+|...++++..+ ...+|.+++|+|||||+|++..
T Consensus 119 ~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 119 LTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp GGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 6677 888999999997224676777 7899999999999999999984
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.36 E-value=4e-12 Score=124.70 Aligned_cols=101 Identities=20% Similarity=0.302 Sum_probs=80.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcE-EEEcCcccCCCCCCceeEEEecccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAI-SAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~-~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. +...+++.+ +...+...+++ +++||+|+++.+ ++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~-l~ 108 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERI-KSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVV-LM 108 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESC-GG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhCCCCCcEEEEcchhhCCC-CCCceEEEEcch-hh
Confidence 4679999999999999998875 899999999999888744 334455334 44455677787 789999999864 66
Q ss_pred ccc--ChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 544 WHI--DGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 544 w~~--D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+.. +...+|.++.|+|||||+|++...
T Consensus 109 ~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 109 FLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 554 568999999999999999887643
No 54
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.36 E-value=2.9e-12 Score=129.65 Aligned_cols=115 Identities=20% Similarity=0.347 Sum_probs=87.1
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFP 528 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfp 528 (870)
+.+.+...+... ..++.+|||||||+|.++..|+.. .|+|+|+++.|+..++... ...+....+...+...++++
T Consensus 23 ~~~~~~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~ 99 (246)
T 1y8c_A 23 WSDFIIEKCVEN--NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKF-RSQGLKPRLACQDISNLNIN 99 (246)
T ss_dssp HHHHHHHHHHTT--TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEECCCGGGCCCS
T ss_pred HHHHHHHHHHHh--CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHH-hhcCCCeEEEecccccCCcc
Confidence 445555554432 235789999999999999999875 8999999999998887543 33444444555566778877
Q ss_pred CCceeEEEecccccccc---cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 529 RNVFDLVHCARCRVPWH---IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 529 d~SFDlV~Ss~~alhw~---~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++||+|+|+..++++. .+...+|.++.|+|||||+|++..
T Consensus 100 -~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 100 -RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp -CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8899999985136666 456899999999999999999974
No 55
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.35 E-value=1.9e-12 Score=124.83 Aligned_cols=96 Identities=18% Similarity=0.284 Sum_probs=79.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++.. .+.+.++.++ +|+++++||+|+++.+ ++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d--~~~~~~~~D~v~~~~~-l~ 86 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK------FDSVITLSDP--KEIPDNSVDFILFANS-FH 86 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH------CTTSEEESSG--GGSCTTCEEEEEEESC-ST
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh------CCCcEEEeCC--CCCCCCceEEEEEccc-hh
Confidence 35679999999999999999876 899999999987766533 3344455544 8889999999999864 67
Q ss_pred cccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 544 WHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 544 w~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+..+...+|.++.|+|||||+|++...
T Consensus 87 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 87 DMDDKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp TCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 677889999999999999999999853
No 56
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=2.4e-12 Score=127.66 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=79.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++ +|||||||+|.++..|+.. .|+++|+++.++..++... ...+....+...+...+++++++||+|+|+. .|+
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~ 105 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLA-QEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHL 105 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHH-HHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHH-HhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcC
Confidence 35 9999999999999999875 8999999999998887443 3345444444555677888889999999964 454
Q ss_pred c-cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 545 H-IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 545 ~-~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. .+...+|.++.++|||||+|++...
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~ 132 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEGF 132 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 3 3558999999999999999999853
No 57
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.35 E-value=2.7e-12 Score=138.15 Aligned_cols=101 Identities=9% Similarity=0.049 Sum_probs=73.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-------cEEEEcCc------ccC--CCC
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-------AISAVMGT------KRL--QFP 528 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-------~~~~v~da------e~L--Pfp 528 (870)
++.+|||||||+|..+..++.. .|+|+|+|+.|+..|+.+. ...+.. ..+.+.+. ..| +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~-~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY-NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH-Hhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4689999999999755544432 7999999999999998644 333322 11223332 222 467
Q ss_pred CCceeEEEecccccccc---cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 529 RNVFDLVHCARCRVPWH---IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 529 d~SFDlV~Ss~~alhw~---~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++||+|+|..+ +||. .+...+|.++.|+|||||+|++++
T Consensus 127 ~~~FD~V~~~~~-lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~ 169 (302)
T 2vdw_A 127 FGKFNIIDWQFA-IHYSFHPRHYATVMNNLSELTASGGKVLITT 169 (302)
T ss_dssp SSCEEEEEEESC-GGGTCSTTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCeeEEEECch-HHHhCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 889999999864 7764 345899999999999999999984
No 58
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.35 E-value=2.2e-12 Score=128.97 Aligned_cols=139 Identities=15% Similarity=0.199 Sum_probs=95.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCccc--CCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKR--LQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~--LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..+. ++.. .+...+... +|+++++||+|+++.+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~-----~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~- 102 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAK-----EKLD--HVVLGDIETMDMPYEEEQFDCVIFGDV- 102 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHH-----TTSS--EEEESCTTTCCCCSCTTCEEEEEEESC-
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHH-----HhCC--cEEEcchhhcCCCCCCCccCEEEECCh-
Confidence 35789999999999999998875 8999999998765544 2221 334445443 7788899999999864
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--------cccccchhHHHHHHHHHhhccceEE
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--------LTVSMCWELVTIKMDKLNSAGFAIY 613 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--------la~~mcW~~va~~~~~L~daGfaI~ 613 (870)
+++..++..+|.++.++|+|||+|+++.+. ..............-. ..+...+. .......+..+||.+.
T Consensus 103 l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Gf~~~ 180 (230)
T 3cc8_A 103 LEHLFDPWAVIEKVKPYIKQNGVILASIPN-VSHISVLAPLLAGNWTYTEYGLLDKTHIRFFT-FNEMLRMFLKAGYSIS 180 (230)
T ss_dssp GGGSSCHHHHHHHTGGGEEEEEEEEEEEEC-TTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCC-HHHHHHHHHHTTEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCCEEEEEeCC-cchHHHHHHHhcCCceeccCCCCCcceEEEec-HHHHHHHHHHcCCeEE
Confidence 777778899999999999999999998533 3333322222111000 01111122 3355677888999887
Q ss_pred E
Q 002884 614 R 614 (870)
Q Consensus 614 r 614 (870)
.
T Consensus 181 ~ 181 (230)
T 3cc8_A 181 K 181 (230)
T ss_dssp E
T ss_pred E
Confidence 6
No 59
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=4.3e-12 Score=126.55 Aligned_cols=139 Identities=19% Similarity=0.294 Sum_probs=92.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccC---CCCC-CceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRL---QFPR-NVFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~L---Pfpd-~SFDlV~Ss~~ 540 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++. ++ ...+...+...+ ++.. .+||+|+|+.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-----~~-~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARA-----AG-AGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHH-----TC-SSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----hc-ccccchhhHHhhcccccccCCCccEEEECch
Confidence 4689999999999999999876 89999999998766653 22 223344443333 5544 45999999864
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhH--HHHHH-----Hhhccc--ccccchhHHHHHHHHHhhccce
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGE--DVEIW-----NAMSNL--TVSMCWELVTIKMDKLNSAGFA 611 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~E--l~~~w-----~~~~~l--a~~mcW~~va~~~~~L~daGfa 611 (870)
++ +.+...+|.++.|+|||||+|+++...... ... ....| ...... .....+.........+.++||.
T Consensus 126 -l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 202 (227)
T 3e8s_A 126 -LL-HQDIIELLSAMRTLLVPGGALVIQTLHPWS-VADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLR 202 (227)
T ss_dssp -CC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTT-TCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEE
T ss_pred -hh-hhhHHHHHHHHHHHhCCCeEEEEEecCccc-cCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCe
Confidence 66 788899999999999999999998543221 111 01111 111100 1111222344667788999999
Q ss_pred EEE
Q 002884 612 IYR 614 (870)
Q Consensus 612 I~r 614 (870)
+..
T Consensus 203 ~~~ 205 (227)
T 3e8s_A 203 LVS 205 (227)
T ss_dssp EEE
T ss_pred EEE
Confidence 987
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.34 E-value=1.5e-12 Score=136.20 Aligned_cols=140 Identities=15% Similarity=0.100 Sum_probs=88.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHc-CC----------------------------
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALER-GI---------------------------- 513 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~er-gl---------------------------- 513 (870)
.++.+|||||||+|.++..++.. .|+|+|+|+.|+..|+....... ++
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 35679999999999877666543 69999999999998764321110 00
Q ss_pred CcE-EEEcCccc-CCCC---CCceeEEEecccccccc----cChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHH
Q 002884 514 PAI-SAVMGTKR-LQFP---RNVFDLVHCARCRVPWH----IDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWN 584 (870)
Q Consensus 514 ~~~-~~v~dae~-LPfp---d~SFDlV~Ss~~alhw~----~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~ 584 (870)
... +...+... .|++ .++||+|+|+.+ +|+. .+...+|.+++|+|||||+|++++... ..... +.
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~-~~~~~----~g 207 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLR-LPSYM----VG 207 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS-CCEEE----ET
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeec-Cccce----eC
Confidence 011 34455433 4543 678999999976 6553 344789999999999999999985321 11100 00
Q ss_pred hhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 585 AMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 585 ~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
. ... ....+. .......+..+||.+.+
T Consensus 208 ~-~~~-~~~~~~-~~~l~~~l~~aGF~i~~ 234 (263)
T 2a14_A 208 K-REF-SCVALE-KGEVEQAVLDAGFDIEQ 234 (263)
T ss_dssp T-EEE-ECCCCC-HHHHHHHHHHTTEEEEE
T ss_pred C-eEe-eccccC-HHHHHHHHHHCCCEEEE
Confidence 0 000 011122 22456778889998876
No 61
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.34 E-value=3e-12 Score=132.50 Aligned_cols=96 Identities=17% Similarity=0.155 Sum_probs=77.3
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|+.. .....+...+...+++ +++||+|+|+...+++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRR-----NPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHH-----CTTSEEEECCTTTCCC-SCCEEEEEECTTGGGG
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhh-----CCCCEEEECChHHCCc-cCCcCEEEEcCchhhh
Confidence 4689999999999999999876 799999999988766532 2234455566677887 7889999998624776
Q ss_pred cc---ChHHHHHHHHhhcCCCcEEEEE
Q 002884 545 HI---DGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 545 ~~---D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.. +...+|.++.++|||||+|++.
T Consensus 124 ~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 124 LAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp SCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 63 4578999999999999999997
No 62
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.33 E-value=2.7e-12 Score=136.64 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=79.3
Q ss_pred CCCCEEEEECCCCchhHHHHh--c---CCEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLF--E---RDVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La--~---r~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss 538 (870)
.++.+|||||||+|.++..|+ . ..|+|+|+++.++..++. .+...++. ..+...+...+|++ ++||+|+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATR-LAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHH-HHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 457899999999999999884 2 289999999999988874 33444544 33445556788888 899999998
Q ss_pred ccccccccChH---HHHHHHHhhcCCCcEEEEEE
Q 002884 539 RCRVPWHIDGG---KLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 539 ~~alhw~~D~~---~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.+ +++..++. .+|.++.|+|||||+|+++.
T Consensus 195 ~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 195 GL-NIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp SS-GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred Ch-hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 64 55555664 37999999999999999984
No 63
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.33 E-value=4.4e-12 Score=134.27 Aligned_cols=100 Identities=13% Similarity=0.136 Sum_probs=79.6
Q ss_pred CCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcC----CCcEEEEcCcccCCCCCCceeEEEecccc
Q 002884 468 TRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERG----IPAISAVMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~erg----l~~~~~v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
..+|||||||+|.++..|+.. .|+|+|+++.++..|+.+. ...+ ....+...+...+|+ +++||+|+|+..+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRL-AEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGS 160 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHH-HTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHH
T ss_pred CCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHH-hhcccccccceEEEeCchhcCCc-CCCcCEEEECCcc
Confidence 459999999999999999876 8999999999998887443 3333 234455556677887 6889999986555
Q ss_pred cccccC--hHHHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHID--GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D--~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++... ...+|.++.|+|||||+|++..
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 666542 4899999999999999999984
No 64
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.33 E-value=6.6e-12 Score=127.77 Aligned_cols=132 Identities=16% Similarity=0.128 Sum_probs=90.4
Q ss_pred CCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEeccccccc
Q 002884 468 TRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
..+|||||||+|.++..|+.. .|+|+|+++.++..++...........+.++. +...++ ++++||+|+|+.+ +++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~-l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVF-FCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESS-TTT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChh-hhc
Confidence 459999999999999999876 89999999999888774433211122344444 455555 5568999999854 665
Q ss_pred cc--ChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 545 HI--DGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 545 ~~--D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
.. +...+|.++.|+|||||+|++.......... . ....+. .......+..+||.+..
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~----------~--~~~~~~-~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHVG----------G--PPYKVD-VSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCS----------C--SSCCCC-HHHHHHHHGGGTEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCC----------C--CCccCC-HHHHHHHHHHcCCeEEE
Confidence 55 6689999999999999999987533221100 0 000011 22345667888998876
No 65
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.32 E-value=8.5e-12 Score=121.14 Aligned_cols=103 Identities=13% Similarity=0.084 Sum_probs=78.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCc--EEEEcCcccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPA--ISAVMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~--~~~v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..++.. .|+++|+++.++..++.. +...++.. +.++.+...-++++++||+|+++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~- 128 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKEN-IKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPP- 128 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-HHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCC-
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECchhcccccCCceEEEECCC-
Confidence 35789999999999999988864 899999999999888744 44455553 4444443222455788999999753
Q ss_pred ccc-ccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 542 VPW-HIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 542 lhw-~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++ ..+...+|.++.++|+|||+|++...
T Consensus 129 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 129 IRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp STTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 554 24457899999999999999999843
No 66
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.32 E-value=3.2e-12 Score=129.54 Aligned_cols=100 Identities=24% Similarity=0.351 Sum_probs=79.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++..... ....+...+...+++++++||+|++..+ +
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~-l 117 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLA-L 117 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESC-G
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEecc-c
Confidence 35789999999999999988864 799999999987766532111 1233445556778888899999999864 7
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++..+...+|.++.++|||||+|+++.
T Consensus 118 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 118 HYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 777788999999999999999999984
No 67
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.31 E-value=9.4e-12 Score=126.09 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=79.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC-CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|+... ...+....+...+...++++ ++||+|+|....+++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKA-METNRHVDFWVQDMRELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHH-HHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGC
T ss_pred CCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhh-hhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhc
Confidence 3589999999999999988875 8999999999998887543 33444445556666777776 7899999974246655
Q ss_pred ---cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 546 ---IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 546 ---~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.+...+|.++.|+|||||+|++..
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 345789999999999999999974
No 68
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.31 E-value=1.6e-11 Score=130.78 Aligned_cols=100 Identities=12% Similarity=0.160 Sum_probs=77.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++.. +...++. ..+...+...+| ++||+|+|..+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~ 164 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQV-LASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEA 164 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHTSCCSSCEEEEESCGGGCC---CCCSEEEEESC
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEECChHHCC---CCcCEEEEeCh
Confidence 46789999999999999888753 899999999999888743 3444543 233344455554 78999999865
Q ss_pred ccccc--cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 541 RVPWH--IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 541 alhw~--~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++. .+...+|.++.|+|||||+|++..+
T Consensus 165 -l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 165 -FEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp -GGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred -HHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 6655 4678999999999999999999854
No 69
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.31 E-value=1.2e-11 Score=126.59 Aligned_cols=115 Identities=26% Similarity=0.326 Sum_probs=85.0
Q ss_pred HHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCC
Q 002884 452 IDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPR 529 (870)
Q Consensus 452 id~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd 529 (870)
.+++...+.... ..++.+|||||||+|.++..|+.. .|+|+|+++.|+..++.. +...+....+...+...++++
T Consensus 27 ~~~~~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~v~~~~~d~~~~~~~- 103 (252)
T 1wzn_A 27 IDFVEEIFKEDA-KREVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRK-AKERNLKIEFLQGDVLEIAFK- 103 (252)
T ss_dssp HHHHHHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCCEEEESCGGGCCCC-
T ss_pred HHHHHHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHH-HHhcCCceEEEECChhhcccC-
Confidence 344455444321 235679999999999999998875 899999999999888744 344455555566666777765
Q ss_pred CceeEEEecccccccc--cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 530 NVFDLVHCARCRVPWH--IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 530 ~SFDlV~Ss~~alhw~--~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++||+|+|..+.+++. .+...+|.++.++|||||+|++..
T Consensus 104 ~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 6799999864444443 245789999999999999999873
No 70
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.31 E-value=1.4e-11 Score=121.71 Aligned_cols=133 Identities=16% Similarity=0.062 Sum_probs=89.2
Q ss_pred CCeeecCCCCccccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHH
Q 002884 432 GEIITFPGGGTQFIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFA 508 (870)
Q Consensus 432 Ge~~~FPgggt~F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A 508 (870)
|..+..|.. .+........+.+...+.... ..++.+|||+|||+|.++..++.. .|+++|+++.++..|+.. +
T Consensus 12 g~~l~~~~~--~~rp~~~~~~~~l~~~l~~~~-~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~-~ 87 (189)
T 3p9n_A 12 GRRIAVPPR--GTRPTTDRVRESLFNIVTARR-DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARN-I 87 (189)
T ss_dssp TCEEECCSC--CC---CHHHHHHHHHHHHHHS-CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHH-H
T ss_pred CcEecCCCC--CCccCcHHHHHHHHHHHHhcc-CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHH-H
Confidence 444555552 222233444445555443321 135789999999999999876654 699999999999988854 4
Q ss_pred HHcCCCcEEEEc-CcccCC--CCCCceeEEEecccccccc-cChHHHHHHHHh--hcCCCcEEEEEE
Q 002884 509 LERGIPAISAVM-GTKRLQ--FPRNVFDLVHCARCRVPWH-IDGGKLLLELNR--VLRPGGYFVWSA 569 (870)
Q Consensus 509 ~ergl~~~~~v~-dae~LP--fpd~SFDlV~Ss~~alhw~-~D~~~vL~Ei~R--VLKPGG~Lv~S~ 569 (870)
...+++.+.++. +...++ +++++||+|+++.. +++. .+...++.++.+ +|+|||+|++..
T Consensus 88 ~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p-~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~ 153 (189)
T 3p9n_A 88 EALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP-YNVDSADVDAILAALGTNGWTREGTVAVVER 153 (189)
T ss_dssp HHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC-TTSCHHHHHHHHHHHHHSSSCCTTCEEEEEE
T ss_pred HHcCCCceEEEEccHHHHHhhccCCCccEEEECCC-CCcchhhHHHHHHHHHhcCccCCCeEEEEEe
Confidence 444554444444 444432 45789999999853 4443 456889999999 999999999984
No 71
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.30 E-value=8.1e-13 Score=146.56 Aligned_cols=139 Identities=13% Similarity=0.134 Sum_probs=95.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEE--EcC-cccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISA--VMG-TKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~--v~d-ae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|++. .|+|+|+++.|+..|+ +++++.... ..+ ...+|+++++||+|+|+.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~-----~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~v 180 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAR-----EKGIRVRTDFFEKATADDVRRTEGPANVIYAANT 180 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHH-----TTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHH-----HcCCCcceeeechhhHhhcccCCCCEEEEEECCh
Confidence 45789999999999999999876 8999999999775544 445543321 112 3567788899999999864
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+++..++..+|.+++|+|||||+|++..+.. ..+.+. ..|..+- ..+ ..+.........+..+||.+..
T Consensus 181 -l~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~-~~~~~~-~~~~~~~-~~~-~~~~s~~~l~~ll~~aGf~~~~ 249 (416)
T 4e2x_A 181 -LCHIPYVQSVLEGVDALLAPDGVFVFEDPYL-GDIVAK-TSFDQIF-DEH-FFLFSATSVQGMAQRCGFELVD 249 (416)
T ss_dssp -GGGCTTHHHHHHHHHHHEEEEEEEEEEEECH-HHHHHH-TCGGGCS-TTC-CEECCHHHHHHHHHHTTEEEEE
T ss_pred -HHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh-HHhhhh-cchhhhh-hhh-hhcCCHHHHHHHHHHcCCEEEE
Confidence 7777899999999999999999999984332 111110 0111110 011 2222233456678899998877
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.30 E-value=9.3e-12 Score=130.52 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=80.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..++. .+...++...+...+...+++ +++||+|+|+.+ +++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~-~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNE-TKEKENLNISTALYDINAANI-QENYDFIVSTVV-FMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSS-GGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHH-HHHHcCCceEEEEeccccccc-cCCccEEEEccc-hhh
Confidence 5789999999999999999876 89999999999988874 444556655555566677776 788999999864 665
Q ss_pred ccC--hHHHHHHHHhhcCCCcEEEEEE
Q 002884 545 HID--GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 545 ~~D--~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
..+ ...+|.++.++|||||+|++..
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 533 3699999999999999988763
No 73
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.30 E-value=1.2e-11 Score=119.54 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCc-ccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGT-KRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~da-e~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++. .+...+++ .+....+. ..++...++||+|+++.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILS-NAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHH-HHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH-HHHHhCCCCCEEEecchHhhhhccCCCCCEEEECC
Confidence 45779999999999999988765 79999999999988874 44455665 44333333 34444448899999975
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+ +++ ..++.++.++|||||+|++..
T Consensus 103 ~-~~~----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 103 G-LTA----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp --TTC----TTHHHHHHHTCCTTCEEEEEE
T ss_pred c-ccH----HHHHHHHHHhcCCCCEEEEEe
Confidence 4 443 689999999999999999984
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.30 E-value=1.5e-12 Score=138.50 Aligned_cols=101 Identities=21% Similarity=0.336 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcC------------------------------
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERG------------------------------ 512 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~erg------------------------------ 512 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.|+..|+........
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4689999999999999888764 899999999999887743221110
Q ss_pred --------------------------C-CcEEEEcC-ccc-----CCCCCCceeEEEeccccccccc------ChHHHHH
Q 002884 513 --------------------------I-PAISAVMG-TKR-----LQFPRNVFDLVHCARCRVPWHI------DGGKLLL 553 (870)
Q Consensus 513 --------------------------l-~~~~~v~d-ae~-----LPfpd~SFDlV~Ss~~alhw~~------D~~~vL~ 553 (870)
. .++.++.+ ... +++.+++||+|+|..+ ++|.. +...+|.
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~v-l~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSL-TKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESC-HHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChH-HHHhhhcCCHHHHHHHHH
Confidence 0 13444433 222 2367889999999854 55532 4578999
Q ss_pred HHHhhcCCCcEEEEE
Q 002884 554 ELNRVLRPGGYFVWS 568 (870)
Q Consensus 554 Ei~RVLKPGG~Lv~S 568 (870)
+++++|||||+|++.
T Consensus 205 ~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 205 RIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCcEEEEe
Confidence 999999999999997
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.29 E-value=1e-11 Score=129.67 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=79.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-C-cEEEEcCcccCCC-CCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI-P-AISAVMGTKRLQF-PRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl-~-~~~~v~dae~LPf-pd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..|+... ...+. . ..+...+...+|+ ++++||+|+|..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRA-RNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHH-HTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45789999999999988887753 7999999999998887433 33343 2 2344455677788 688999999986
Q ss_pred ccccc----ccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPW----HIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw----~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+ +|+ ..+...+|.++.|+|||||+|++..
T Consensus 142 ~-l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 142 S-FHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp C-GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred h-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4 665 2445889999999999999999984
No 76
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.29 E-value=7e-12 Score=124.22 Aligned_cols=101 Identities=25% Similarity=0.328 Sum_probs=77.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++..... .....+...+...+++++++||+|+++.+ +
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~-~ 117 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGT-L 117 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESH-H
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcc-h
Confidence 35789999999999999988765 799999999988877643321 12234455566778888899999998643 3
Q ss_pred ccc---------------cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWH---------------IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~---------------~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+.. .+...+|.++.|+|||||.|++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 118 DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 221 234789999999999999999984
No 77
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.28 E-value=6.1e-12 Score=129.04 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=79.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCc-cc-CC--CCCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGT-KR-LQ--FPRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~da-e~-LP--fpd~SFDlV~Ss 538 (870)
...+|||||||+|.++..|+.. .|+|+|+++.++..|. +.+...++.++.++.++ .. ++ +++++||+|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~-~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACL-ASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHH-HHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHH-HHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 5679999999999999988753 6999999999999887 45556677666666553 43 34 788999999987
Q ss_pred ccccccccCh--------HHHHHHHHhhcCCCcEEEEEE
Q 002884 539 RCRVPWHIDG--------GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 539 ~~alhw~~D~--------~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+. .+|+... ..+|.++.|+|||||+|++++
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 43 5665432 259999999999999999984
No 78
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.28 E-value=6.6e-12 Score=132.24 Aligned_cols=139 Identities=13% Similarity=0.118 Sum_probs=87.2
Q ss_pred CCCEEEEECCCCchhHHHHhc---CCEEEEeCChhhHHHHHHHHHH----------------HcCCC-------------
Q 002884 467 YTRVSLDVGCGVASFGGYLFE---RDVLTMSFAPKDEHDAQIQFAL----------------ERGIP------------- 514 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~---r~VtgVDiSp~ml~~A~vq~A~----------------ergl~------------- 514 (870)
++.+|||||||+|.++..++. ..|+|+|+|+.|+..|+..... ..+..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 578999999999996544433 3899999999999877642211 11100
Q ss_pred -cEEEEcCccc-CCC-----CCCceeEEEeccccccc----ccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHH
Q 002884 515 -AISAVMGTKR-LQF-----PRNVFDLVHCARCRVPW----HIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIW 583 (870)
Q Consensus 515 -~~~~v~dae~-LPf-----pd~SFDlV~Ss~~alhw----~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w 583 (870)
..+..++... +|+ ++++||+|+|+.+ ++| ..+...+|.++.|+|||||+|++..... ....
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~-l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~-~~~~------ 222 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALE-ESWY------ 222 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEES-CCEE------
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhh-hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecC-cceE------
Confidence 1223335444 664 4567999999864 777 4567899999999999999999974211 1110
Q ss_pred HhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 584 NAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 584 ~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
....................+..+||.+..
T Consensus 223 -~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 223 -LAGEARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp -EETTEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred -EcCCeeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 000101001111123456678889998766
No 79
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.28 E-value=3.3e-11 Score=125.01 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=78.0
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChh------hHHHHHHHHHHHcCC-CcEEEEc-C---cccCCCCC
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPK------DEHDAQIQFALERGI-PAISAVM-G---TKRLQFPR 529 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~------ml~~A~vq~A~ergl-~~~~~v~-d---ae~LPfpd 529 (870)
.++.+|||||||+|.++..|+. ..|+|+|+++. ++..++... ...++ +.+.++. + ...+|+++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHL-LAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHH-HTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHH-HhcCCCCceEEEECChhhhccCCCCC
Confidence 4678999999999999888865 37999999997 888777443 34444 3344444 3 35677888
Q ss_pred CceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 530 NVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 530 ~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
++||+|+|+.+ +++..++..++..+.++++|||+|++....
T Consensus 121 ~~fD~v~~~~~-l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 121 QHFDRVVLAHS-LWYFASANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp CCCSEEEEESC-GGGSSCHHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred CCEEEEEEccc-hhhCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence 99999999865 666677777777777777779999998543
No 80
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=4.2e-12 Score=129.75 Aligned_cols=101 Identities=10% Similarity=-0.041 Sum_probs=75.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCC-----CceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPR-----NVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd-----~SFDlV~Ss 538 (870)
.++.+|||||||+|.++..|+.. +|+|+|+++.|+..++... ......+...+...+++.. ..||+|+++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCccEEEEc
Confidence 35679999999999999999875 8999999999887776432 1112334444455544322 249999998
Q ss_pred cccccccc--ChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 539 RCRVPWHI--DGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 539 ~~alhw~~--D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. ++|+.. +...+|.++.|+|||||+|++...
T Consensus 132 ~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 132 T-GFHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp S-SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred c-hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 5 477666 568999999999999999888743
No 81
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.28 E-value=1.4e-11 Score=124.42 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=76.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.|+..++.. .....+...+...+++ +++||+|+|....+++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKR-----LPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHH-----CTTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHh-----CCCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 5789999999999999988875 799999999988766532 2223445555667777 6789999976545776
Q ss_pred cc---ChHHHHHHHHhhcCCCcEEEEEE
Q 002884 545 HI---DGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 545 ~~---D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. +...+|.++.++|||||+|++..
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 63 34789999999999999999973
No 82
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.27 E-value=2.9e-11 Score=117.50 Aligned_cols=99 Identities=26% Similarity=0.245 Sum_probs=77.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. .....+...+...+++++++||+|+++...+++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQD-----FPEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----CTTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHh-----CCCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 5789999999999999988875 899999999987766532 222344555667778888999999997334555
Q ss_pred c--cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 545 H--IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 545 ~--~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. .+...+|.++.++|+|||++++...
T Consensus 121 ~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 121 LAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 4 2347899999999999999999843
No 83
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=2e-11 Score=122.34 Aligned_cols=112 Identities=21% Similarity=0.255 Sum_probs=85.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFERDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
.++.+|||||||+|.++..|. ..|+++|+++. . ..+...+...+|+++++||+|+|+.+ +|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------------~--~~~~~~d~~~~~~~~~~fD~v~~~~~-l~~- 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-NPVHCFDLASL-------------D--PRVTVCDMAQVPLEDESVDVAVFCLS-LMG- 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS-------------S--TTEEESCTTSCSCCTTCEEEEEEESC-CCS-
T ss_pred CCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC-------------C--ceEEEeccccCCCCCCCEeEEEEehh-ccc-
Confidence 356799999999999998885 68999999986 1 23455566778999999999999865 664
Q ss_pred cChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEEec
Q 002884 546 IDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYRKP 616 (870)
Q Consensus 546 ~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~rkg 616 (870)
.+...+|.++.++|+|||+|+++....... ........+..+||.+....
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~---------------------~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSRFE---------------------DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGGCS---------------------CHHHHHHHHHHTTEEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCCCC---------------------CHHHHHHHHHHCCCEEEEEe
Confidence 788999999999999999999984321000 12234456778899887744
No 84
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.27 E-value=2.5e-11 Score=135.09 Aligned_cols=103 Identities=17% Similarity=0.117 Sum_probs=83.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||||||+|.++..|+.. +|+++|+++.++..++. .+...++...+...+...+++++++||+|+|+.. +|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~-n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp-~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQK-GLEANALKAQALHSDVDEALTEEARFDIIVTNPP-FHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHH-HHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCC-CCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCeEEEEcchhhccccCCCeEEEEECCc-hhh
Confidence 5679999999999999999875 89999999999988874 4445566656666666777777789999999854 555
Q ss_pred -----ccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 545 -----HIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 545 -----~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
..+...+|.++.++|||||+|+++...
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 234478999999999999999998544
No 85
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.26 E-value=1.9e-11 Score=124.22 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCC--CCCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQ--FPRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LP--fpd~SFDlV~Ss~ 539 (870)
.+.+|||||||+|.++..|+.. .|+|+|+++.++..|.. .+...+++++.++.+ ...++ +++++||.|++++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~-~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 4679999999999999888753 79999999999988874 455566665555554 45565 7788999999864
Q ss_pred cccccccC--------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHID--------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D--------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. .+|... ...+|.++.|+|||||.|++.+
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 3 455432 2689999999999999999983
No 86
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.25 E-value=3.8e-11 Score=121.01 Aligned_cols=101 Identities=19% Similarity=0.268 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCC--CCCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQ--FPRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LP--fpd~SFDlV~Ss~ 539 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|+. .+...+++++.++. +...++ +++++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALD-KVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 5679999999999999888753 79999999999988874 44445655555544 456666 7788999999975
Q ss_pred ccccccc--------ChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHI--------DGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~--------D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. .+|.. ....+|.++.++|||||+|++..
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 3 45532 12689999999999999999973
No 87
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.25 E-value=5.6e-12 Score=131.84 Aligned_cols=99 Identities=17% Similarity=0.214 Sum_probs=76.9
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCc----ccCCCCCCceeEE
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGT----KRLQFPRNVFDLV 535 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~da----e~LPfpd~SFDlV 535 (870)
.+++.+|||||||+|.++..|++. .|+|+|+++.|+..+.. .+.++ +++..+... ...++..++||+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~-~a~~~--~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT-VVRDR--RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH-HSTTC--TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH-hhHhh--cCeeEEEEeccCccccccccceEEEE
Confidence 467999999999999999999863 79999999999987753 33332 334444332 4556778899999
Q ss_pred EecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 536 HCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++. ++++.+...++.++.|+|||||.|+++.
T Consensus 152 f~d---~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 152 YAD---VAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEC---CCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEe---ccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 975 3455567889999999999999999973
No 88
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.24 E-value=1.4e-11 Score=126.52 Aligned_cols=140 Identities=13% Similarity=0.093 Sum_probs=90.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-----------------------------
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI----------------------------- 513 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl----------------------------- 513 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..++..... .+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 35679999999999998888764 799999999999887643321 110
Q ss_pred -Cc-EEEEcCcccC-CCCC---CceeEEEecccccc----cccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHH
Q 002884 514 -PA-ISAVMGTKRL-QFPR---NVFDLVHCARCRVP----WHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIW 583 (870)
Q Consensus 514 -~~-~~~v~dae~L-Pfpd---~SFDlV~Ss~~alh----w~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w 583 (870)
.. .+...+...+ ++++ ++||+|+|+.+ ++ +..+...+|.++.|+|||||+|++....... ..
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~-l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~-~~------ 205 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLC-LDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSS-YY------ 205 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCC-EE------
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhh-hhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCc-eE------
Confidence 02 3444555443 4455 89999999865 55 3345689999999999999999998533211 00
Q ss_pred HhhcccccccchhHHHHHHHHHhhccceEEEe
Q 002884 584 NAMSNLTVSMCWELVTIKMDKLNSAGFAIYRK 615 (870)
Q Consensus 584 ~~~~~la~~mcW~~va~~~~~L~daGfaI~rk 615 (870)
....................+.++||.+...
T Consensus 206 -~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 206 -MIGEQKFSSLPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp -EETTEEEECCCCCHHHHHHHHHHTTCEEEEE
T ss_pred -EcCCccccccccCHHHHHHHHHHCCCEEEEE
Confidence 0001000001111223456788899988773
No 89
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.24 E-value=7.8e-11 Score=119.05 Aligned_cols=97 Identities=19% Similarity=0.105 Sum_probs=74.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-cccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...+++ .+.++.+ ..........||+|++...
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~- 131 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQK-NIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG- 131 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHH-HHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-
Confidence 45789999999999999888875 89999999999988874 45556766 5555544 4442222357999998742
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+ +.. ++.++.++|||||+|++..
T Consensus 132 ~----~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 132 G----SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp C----CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred c----cHH-HHHHHHHhcCCCcEEEEEe
Confidence 2 456 9999999999999999984
No 90
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.22 E-value=3.8e-11 Score=119.63 Aligned_cols=117 Identities=17% Similarity=0.110 Sum_probs=80.9
Q ss_pred ccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEE
Q 002884 444 FIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPA-ISAV 519 (870)
Q Consensus 444 F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v 519 (870)
|..+.......+...+... ..++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...++.. .+..
T Consensus 39 f~~~~~~~~~~~~~~l~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~ 115 (205)
T 3grz_A 39 FGTGNHQTTQLAMLGIERA--MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE-NAALNGIYDIALQK 115 (205)
T ss_dssp ---CCHHHHHHHHHHHHHH--CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCCCEEEE
T ss_pred cCCCCCccHHHHHHHHHHh--ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEe
Confidence 4444433344444444332 235789999999999999888864 79999999999988874 444455553 3333
Q ss_pred cCcccCCCCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 520 MGTKRLQFPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 520 ~dae~LPfpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.+.. ++.+++||+|+++.. +++ ...+|.++.++|||||+|+++.
T Consensus 116 ~d~~--~~~~~~fD~i~~~~~-~~~---~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 116 TSLL--ADVDGKFDLIVANIL-AEI---LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp SSTT--TTCCSCEEEEEEESC-HHH---HHHHGGGSGGGEEEEEEEEEEE
T ss_pred cccc--ccCCCCceEEEECCc-HHH---HHHHHHHHHHhcCCCCEEEEEe
Confidence 3333 345689999999753 332 4788999999999999999973
No 91
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.22 E-value=1.2e-10 Score=116.04 Aligned_cols=99 Identities=15% Similarity=0.018 Sum_probs=76.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..++.. +...+++.+.++.+ ..........||+|++...
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDN-LKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS 117 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHH-HHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC
Confidence 46789999999999999888763 799999999999888744 44455555555544 3333333367999999743
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++ +...+|.++.++|||||+|++..
T Consensus 118 -~~---~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 118 -GG---MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp -TT---CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred -Cc---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 32 67899999999999999999984
No 92
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.21 E-value=3.6e-11 Score=122.50 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=70.1
Q ss_pred CCCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-Cccc----CCCCCCceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKR----LQFPRNVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~----LPfpd~SFDlV~ 536 (870)
.++.+|||||||+|.++..|++ ..|+|+|+++.|+..+. +.++.+ .++..+. +... .+++ ++||+|+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~-~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~ 131 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL-ELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIY 131 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH-HHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEE
Confidence 4578999999999999887765 37999999999876544 345443 2333443 3333 3555 7899999
Q ss_pred ecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 537 CARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 537 Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
|+. ..+.+...+|.+++|+|||||+|+++.
T Consensus 132 ~~~---~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDI---AQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECC---CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eec---cChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 972 222233556999999999999999983
No 93
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.20 E-value=1.6e-10 Score=126.93 Aligned_cols=143 Identities=13% Similarity=0.139 Sum_probs=94.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.+..+|||||||+|.++..|+++ .++++|+ +.++..|+.... ..++ +.+.++.++...|++. .||+|++..+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~l~~~v~~~~~d~~~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLT-GRGLADRCEILPGDFFETIPD-GADVYLIKHV 277 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHH-HTTCTTTEEEEECCTTTCCCS-SCSEEEEESC
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhh-hcCcCCceEEeccCCCCCCCC-CceEEEhhhh
Confidence 35689999999999999888763 7999999 998888875443 3443 3455555443356766 7999999876
Q ss_pred ccccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--cccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|+..+. ..+|++++++|||||+|++............ ..+..+.. ...... ....+....+.++||.+.+
T Consensus 278 -lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~-~t~~e~~~ll~~aGf~~~~ 352 (369)
T 3gwz_A 278 -LHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAE-RSESEFAALLEKSGLRVER 352 (369)
T ss_dssp -GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCC-BCHHHHHHHHHTTTEEEEE
T ss_pred -hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCcc-CCHHHHHHHHHHCCCeEEE
Confidence 5544544 3799999999999999999754333321111 11211110 011111 1233566778899999877
No 94
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.20 E-value=9.6e-11 Score=126.62 Aligned_cols=111 Identities=12% Similarity=0.230 Sum_probs=81.3
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHH-h---cCCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYL-F---ERDVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRL 525 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~L-a---~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~L 525 (870)
|...+...+. ++...++.+|||||||+|.++..+ + ..+|+|+|+++.|+..|+.. +...|+..+.++.+ ...+
T Consensus 107 ~~~l~~~E~~-la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~-~~~~gl~~v~~v~gDa~~l 184 (298)
T 3fpf_A 107 YLELLKNEAA-LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKV-IEGLGVDGVNVITGDETVI 184 (298)
T ss_dssp HHHHHHHHHH-HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHH-HHHHTCCSEEEEESCGGGG
T ss_pred HHHHHHHHHH-HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHH-HHhcCCCCeEEEECchhhC
Confidence 4444444432 333467899999999999766433 3 34899999999999998854 44445555555554 4555
Q ss_pred CCCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 526 QFPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 526 Pfpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
| +++||+|++.. + ..+...++.++.|+|||||+|++..
T Consensus 185 ~--d~~FDvV~~~a--~--~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 185 D--GLEFDVLMVAA--L--AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp G--GCCCSEEEECT--T--CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred C--CCCcCEEEECC--C--ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 4 78999999863 2 4678899999999999999999974
No 95
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.20 E-value=2.9e-11 Score=124.61 Aligned_cols=143 Identities=17% Similarity=0.196 Sum_probs=83.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCC-hhhHHHH---HHHHHHHcCCCcEEEEc-CcccCCCC-CCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFA-PKDEHDA---QIQFALERGIPAISAVM-GTKRLQFP-RNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiS-p~ml~~A---~vq~A~ergl~~~~~v~-dae~LPfp-d~SFDlV~ 536 (870)
++.+|||||||+|.++..|+.. .|+|+|+| +.|+..| + +.+...+++++.++. +...+|.. .+.||.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~-~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKII-KKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHT-SCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHH-HHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 5789999999999999999842 79999999 7776654 2 223345666555554 45666532 24566666
Q ss_pred ecccccccc-------cChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhcc
Q 002884 537 CARCRVPWH-------IDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAG 609 (870)
Q Consensus 537 Ss~~alhw~-------~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daG 609 (870)
++ ++|. .+...+|.+++|+|||||+|++..+.. .................. .|.........+.++|
T Consensus 103 ~~---~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~el~~~l~~aG 176 (225)
T 3p2e_A 103 IL---FPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYS-DSYEEAEIKKRGLPLLSK--AYFLSEQYKAELSNSG 176 (225)
T ss_dssp EE---SCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCC-C--------------CCH--HHHHSHHHHHHHHHHT
T ss_pred Ee---CCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecc-ccchhchhhhcCCCCCCh--hhcchHHHHHHHHHcC
Confidence 54 2332 234678999999999999999953222 221111101111111111 1211112455678889
Q ss_pred ceEEEec
Q 002884 610 FAIYRKP 616 (870)
Q Consensus 610 faI~rkg 616 (870)
|.+....
T Consensus 177 f~v~~~~ 183 (225)
T 3p2e_A 177 FRIDDVK 183 (225)
T ss_dssp CEEEEEE
T ss_pred CCeeeee
Confidence 9987744
No 96
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.20 E-value=1.4e-10 Score=122.89 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=74.0
Q ss_pred CCCEEEEECCCC---chhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccC-----------CC
Q 002884 467 YTRVSLDVGCGV---ASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRL-----------QF 527 (870)
Q Consensus 467 ~~~~VLDIGCGt---G~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~L-----------Pf 527 (870)
...+|||||||+ |.++..+.. .+|+++|+++.|+..|+.... ..+.+.++. +.... .+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA---KDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT---TCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC---CCCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 987766543 489999999999988875432 123344444 33221 13
Q ss_pred CCCceeEEEecccccccccC--hHHHHHHHHhhcCCCcEEEEEEC
Q 002884 528 PRNVFDLVHCARCRVPWHID--GGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 528 pd~SFDlV~Ss~~alhw~~D--~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+..+||+|+++. ++||..+ ...+|++++|+|||||+|+++..
T Consensus 154 d~~~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DFSRPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CTTSCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 335899999985 5888766 68999999999999999999853
No 97
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.19 E-value=9.2e-11 Score=115.92 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=77.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccCC-CCCCceeEEEe
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRLQ-FPRNVFDLVHC 537 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~LP-fpd~SFDlV~S 537 (870)
.++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+.. +...++ +.+.++.+ ...++ +.+++||+|++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKK-LTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-HHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 35789999999999998888763 899999999999888744 444555 34445544 45554 66789999999
Q ss_pred cccccccc--------cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 538 ARCRVPWH--------IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 538 s~~alhw~--------~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+...++.. .+...+|.++.++|||||+|++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 75432211 1235799999999999999999853
No 98
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.19 E-value=9.8e-11 Score=126.05 Aligned_cols=142 Identities=13% Similarity=0.040 Sum_probs=91.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcCcccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
+..+|||||||+|.++..|++. .++++|+ +.++..|+... ...++ +.+.++.++...|+|. .||+|++..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~v- 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRF-LDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAV- 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTTSCCCC-SCSEEEEESC-
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhh-hhcCcCcCeEEecCCCCCCCCC-CCcEEEEehh-
Confidence 4679999999999999888753 7999999 99888887443 34444 3455555432256665 7999999876
Q ss_pred cccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 542 VPWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 542 lhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|+..+. ..+|++++++|||||+|++.........+........+. ....... ...+....+.++||.+.+
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~-~~~~~~~-t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLT-YFGGKER-SLAELGELAAQAGLAVRA 317 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHH-HHSCCCC-CHHHHHHHHHHTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHh-hCCCCCC-CHHHHHHHHHHCCCEEEE
Confidence 5544443 789999999999999999985443322110000000000 0111111 133556778899998876
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=3.5e-11 Score=121.01 Aligned_cols=103 Identities=19% Similarity=0.214 Sum_probs=75.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHH---HHHcCCCcEEE-EcCcccCCCCCCceeEEEe
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQF---ALERGIPAISA-VMGTKRLQFPRNVFDLVHC 537 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~---A~ergl~~~~~-v~dae~LPfpd~SFDlV~S 537 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.|+..+.... +...+++.+.+ ..+...+|+++++ |.|+.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 35789999999999999888764 7999999999987543211 12345555544 4456789998777 87774
Q ss_pred ccc--cc--ccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARC--RV--PWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~--al--hw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
..+ .. |+..++..+|.++.|+|||||.|+++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 321 11 134566899999999999999999973
No 100
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.19 E-value=9.2e-11 Score=118.69 Aligned_cols=102 Identities=18% Similarity=0.025 Sum_probs=75.7
Q ss_pred CCCCEEEEECCC-CchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCc-ccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCG-VASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGT-KRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCG-tG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~da-e~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||+||| +|.++..|+.. .|+|+|+++.++..|+. .+...++...+...+. ...++++++||+|+|+..
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARR-NIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 357899999999 99998887753 89999999999988874 4445565444444443 234567789999999743
Q ss_pred ccccccC-------------------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 541 RVPWHID-------------------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D-------------------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++..+ ...+|.++.++|||||+|++..
T Consensus 133 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 133 -YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp -CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 222111 2678999999999999999973
No 101
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=9.2e-11 Score=128.37 Aligned_cols=100 Identities=14% Similarity=0.169 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc-
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC- 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~- 540 (870)
++.+|||||||+|.++..|+++ +|+|+|+++ |+..|+ +.+...++. ..+...+...+++++++||+|+|...
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 4789999999999999988875 899999995 888877 455556665 34445556888999999999999632
Q ss_pred -ccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 541 -RVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 541 -alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.+++..+...+|.++.|+|||||+|++.
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1334456789999999999999999854
No 102
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.18 E-value=9.4e-11 Score=117.91 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC--CcEEEEcC-cccC-C-CCCCc-eeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI--PAISAVMG-TKRL-Q-FPRNV-FDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl--~~~~~v~d-ae~L-P-fpd~S-FDlV~S 537 (870)
++.+|||+|||+|.++..++.+ .|+++|+++.|+..|+. .+...++ +.+.++.+ ...+ + +++++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKK-NLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHH-HHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 4679999999999999876543 79999999999998875 4445565 45555554 3333 3 24678 999999
Q ss_pred cccccccccChHHHHHHH--HhhcCCCcEEEEEECC
Q 002884 538 ARCRVPWHIDGGKLLLEL--NRVLRPGGYFVWSATP 571 (870)
Q Consensus 538 s~~alhw~~D~~~vL~Ei--~RVLKPGG~Lv~S~~p 571 (870)
+.. ++ ..+...++..+ .|+|||||+|+++..+
T Consensus 132 ~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 132 DPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp CCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred CCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 753 33 23457888888 7789999999998533
No 103
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.17 E-value=6.4e-11 Score=122.89 Aligned_cols=98 Identities=22% Similarity=0.331 Sum_probs=75.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..|. +++....+...+...+|+++++||+|+++.+
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-----~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAA-----KRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHH-----HHCTTSEEEECCTTSCSBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-----HhCCCcEEEEcchhhCCCCCCceeEEEEeCC--
Confidence 5789999999999999888764 7999999999876654 3333345556666788999999999998642
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhH
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGE 578 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~E 578 (870)
..++.++.|+|||||.|++.. +....+.+
T Consensus 158 ------~~~l~~~~~~L~pgG~l~~~~-~~~~~~~~ 186 (269)
T 1p91_A 158 ------PCKAEELARVVKPGGWVITAT-PGPRHLME 186 (269)
T ss_dssp ------CCCHHHHHHHEEEEEEEEEEE-ECTTTTHH
T ss_pred ------hhhHHHHHHhcCCCcEEEEEE-cCHHHHHH
Confidence 135899999999999999984 44444443
No 104
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=1.3e-10 Score=112.08 Aligned_cols=95 Identities=15% Similarity=0.153 Sum_probs=75.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..++. .+...+++.+.++.+ ... ++++++||+|+++.+
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~-- 109 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQ-NLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT-- 109 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHH-HHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC--
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHH-HHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc--
Confidence 45789999999999999988864 89999999999988874 444455554544444 333 666789999999753
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.+...++.++.++ |||.|++..
T Consensus 110 ---~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 110 ---KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp ---SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred ---ccHHHHHHHHhhC--CCCEEEEEe
Confidence 5678999999999 999999984
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.17 E-value=1.1e-10 Score=119.92 Aligned_cols=96 Identities=14% Similarity=0.020 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCC---CCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFP---RNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfp---d~SFDlV~Ss 538 (870)
++.+|||||||+|.++..|+. ..|+++|+++.|+..++. .+...+++.+.++. +...++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEK-LSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 467999999999998888873 389999999999988874 44455665454544 45666654 6789999996
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
. ..+...++.++.++|||||+|++.
T Consensus 149 ~-----~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 149 A-----VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp C-----CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c-----cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 3 256789999999999999999986
No 106
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.16 E-value=7.2e-11 Score=122.51 Aligned_cols=102 Identities=21% Similarity=0.187 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHH-----HcCCCcEEEEcC-ccc-CC--CCCCcee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFAL-----ERGIPAISAVMG-TKR-LQ--FPRNVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~-----ergl~~~~~v~d-ae~-LP--fpd~SFD 533 (870)
+..+|||||||+|.++..|+.. .|+|+|+++.|+..|+..... ..+..++.++.+ +.. +| |++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4678999999999999998864 799999999999888754332 134555555544 444 67 8889999
Q ss_pred EEEecccccccccC--------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 534 LVHCARCRVPWHID--------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 534 lV~Ss~~alhw~~D--------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+|++.+. .+|... ...+|.++.|+|||||.|++.+
T Consensus 126 ~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 126 KMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 9988642 445321 1479999999999999999973
No 107
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.16 E-value=3.9e-11 Score=122.15 Aligned_cols=88 Identities=17% Similarity=0.164 Sum_probs=72.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCc-ccCCCC-CCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGT-KRLQFP-RNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~da-e~LPfp-d~SFDlV~Ss~~al 542 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. .....+...+. ..+|++ +++||+|+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~---- 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSR---- 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEE----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeC----
Confidence 5789999999999999999875 899999999988776533 22344455555 678888 8999999986
Q ss_pred ccccChHHHHHHHHhhcCCCcEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFV 566 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv 566 (870)
.+...+|.++.|+|||||+|+
T Consensus 119 ---~~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 119 ---RGPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---SCCSGGGGGHHHHEEEEEEEE
T ss_pred ---CCHHHHHHHHHHHcCCCcEEE
Confidence 356788999999999999999
No 108
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.16 E-value=1.5e-10 Score=115.60 Aligned_cols=97 Identities=16% Similarity=0.101 Sum_probs=74.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||||||+|.++..|+.. +|+++|+++.++..++.. ....+++.+.++. +....+.+.++||+|++..+ +
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 153 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRR-LKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA-P 153 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB-C
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHH-HHHcCCCceEEEECCcccCCccCCCccEEEEccc-h
Confidence 46789999999999999888864 899999999999888743 4445555554444 44555556789999999754 5
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
++..+ ++.++|||||+|+++..
T Consensus 154 ~~~~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 154 PEIPT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp SSCCT------HHHHTEEEEEEEEEEEC
T ss_pred hhhhH------HHHHhcccCcEEEEEEc
Confidence 55543 68999999999999854
No 109
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.15 E-value=7.6e-11 Score=114.69 Aligned_cols=132 Identities=11% Similarity=-0.000 Sum_probs=87.1
Q ss_pred cCCeeecCCCCccccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHH
Q 002884 431 TGEIITFPGGGTQFIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQF 507 (870)
Q Consensus 431 ~Ge~~~FPgggt~F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~ 507 (870)
++..+.+|.+. .+......+.+.+...+.. ..++.+|||+|||+|.++..++.. .|+++|+++.++..|+...
T Consensus 12 ~~~~~~~~~~~-~~rp~~~~~~~~~~~~l~~---~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~ 87 (187)
T 2fhp_A 12 GGRRLKALDGD-NTRPTTDKVKESIFNMIGP---YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENI 87 (187)
T ss_dssp TTCBCCCCCCC-SSCCCCHHHHHHHHHHHCS---CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHH
T ss_pred cCccccCCCCC-CcCcCHHHHHHHHHHHHHh---hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHH
Confidence 34445555443 2333344555555555432 135679999999999998877654 7999999999998887544
Q ss_pred HHHcCC-CcEEEEc-Cccc----CCCCCCceeEEEecccccccccChHHHHHHH--HhhcCCCcEEEEEE
Q 002884 508 ALERGI-PAISAVM-GTKR----LQFPRNVFDLVHCARCRVPWHIDGGKLLLEL--NRVLRPGGYFVWSA 569 (870)
Q Consensus 508 A~ergl-~~~~~v~-dae~----LPfpd~SFDlV~Ss~~alhw~~D~~~vL~Ei--~RVLKPGG~Lv~S~ 569 (870)
...++ +.+.++. +... +++.+++||+|+++.. ++ ......++..+ .|+|+|||+|++..
T Consensus 88 -~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 88 -AITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp -HHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -HHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 34454 2344444 4322 2334678999999753 23 24557777777 89999999999984
No 110
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.15 E-value=5.1e-11 Score=126.45 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=71.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCC-----CCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQF-----PRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPf-----pd~SFDlV~Ss 538 (870)
.++.+|||||||+|.++..|+++ .|+|+|+|+.|+..|+.+... .. . ..+...++. .+++||+|+|+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~-~~---v--~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD-RC---V--TIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS-SC---C--EEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh-cc---c--eeeeeecccccccccCCCccEEEEh
Confidence 45789999999999999999875 899999999999877643221 11 1 111122222 25789999998
Q ss_pred ccccccc-cChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 539 RCRVPWH-IDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 539 ~~alhw~-~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
.++.|+. .+...+|.++.++| |||.|+++...
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 6533333 23478999999999 99999999543
No 111
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.13 E-value=2.2e-10 Score=125.07 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-CcEEE-EcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI-PAISA-VMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~-v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..+++. .|+|+|+++ |+..|+. .+...++ +.+.+ ..+...+++++++||+|+|...
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~-~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMD-IIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHH-HHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHH-HHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 35789999999999999888865 799999997 8877764 4445555 34444 4456788888889999998642
Q ss_pred --ccccccChHHHHHHHHhhcCCCcEEEE
Q 002884 541 --RVPWHIDGGKLLLELNRVLRPGGYFVW 567 (870)
Q Consensus 541 --alhw~~D~~~vL~Ei~RVLKPGG~Lv~ 567 (870)
.+++..+...+|.++.|+|||||+|+.
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred hhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 133334457899999999999999983
No 112
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.13 E-value=2.2e-10 Score=127.06 Aligned_cols=101 Identities=16% Similarity=0.209 Sum_probs=74.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC---cEEEEcCcccCCCCCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP---AISAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~---~~~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
++.+|||||||+|.++..++.. .|+++|+++.++..++.. +...++. .+.++.++..-++++++||+|+|+.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n-~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLN-VETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH-HHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHH-HHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 4589999999999999888764 799999999999888754 4444443 2333443322367788999999985
Q ss_pred cccccc---cCh--HHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWH---IDG--GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~---~D~--~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. +|+. .+. ..+|.++.++|||||.|++..
T Consensus 301 p-fh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 301 P-FHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp C-C-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred C-cccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 4 4432 111 468999999999999999974
No 113
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.13 E-value=4.5e-10 Score=121.52 Aligned_cols=144 Identities=13% Similarity=0.174 Sum_probs=92.4
Q ss_pred CCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-cccCC-CCCCceeEEEeccc
Q 002884 468 TRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKRLQ-FPRNVFDLVHCARC 540 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~LP-fpd~SFDlV~Ss~~ 540 (870)
+.+|||||||+|.++..|+++ .++++|+ +.++..++.. ....++. .+.++.+ ....+ +..+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKT-IHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHH-HHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHH-HHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 789999999999999888763 7999999 8888887743 3344443 3444443 44443 24456999999875
Q ss_pred ccccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCc--hhHHHH--HHHhhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQK--LGEDVE--IWNAMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~t--L~El~~--~w~~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|+..+. ..+|++++++|||||+|++........ .+.... .+..+........+. .......+.++||.+.+
T Consensus 258 -lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t-~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 258 -LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHP-TPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp -GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCC-HHHHHHHHHHTTCEEEE
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCC-HHHHHHHHHHCCCceee
Confidence 5544443 799999999999999999985433221 111111 111111111111222 33556778899999887
Q ss_pred e
Q 002884 615 K 615 (870)
Q Consensus 615 k 615 (870)
.
T Consensus 336 ~ 336 (352)
T 3mcz_A 336 R 336 (352)
T ss_dssp E
T ss_pred e
Confidence 3
No 114
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.13 E-value=3.8e-10 Score=113.52 Aligned_cols=100 Identities=10% Similarity=-0.044 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-ccc-CCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKR-LQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~-LPfpd~SFDlV~Ss~~a 541 (870)
++.+|||+|||+|.++..++.+ .|+++|+++.|+..|+. .+...+++.+.++.+ ... +++.+++||+|++...
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~-~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIK-NLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHH-HHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 4679999999999999876543 79999999999998874 444556555555554 333 5667789999999743
Q ss_pred cccccChHHHHHHHHh--hcCCCcEEEEEE
Q 002884 542 VPWHIDGGKLLLELNR--VLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~R--VLKPGG~Lv~S~ 569 (870)
++ ......++..+.+ +|+|||+|+++.
T Consensus 132 ~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 132 FR-RGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp SS-TTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CC-CCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 33 2445778888865 599999999984
No 115
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.12 E-value=1e-10 Score=111.99 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=84.0
Q ss_pred CCeeecCCCCccccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHH
Q 002884 432 GEIITFPGGGTQFIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFAL 509 (870)
Q Consensus 432 Ge~~~FPgggt~F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ 509 (870)
+..+..+.+ +......+.+.+...+... ..++.+|||+|||+|.++..|+.. .|+|+|+++.++..++....
T Consensus 11 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~- 84 (171)
T 1ws6_A 11 GVALKVPAS---ARPSPVRLRKALFDYLRLR--YPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVR- 84 (171)
T ss_dssp TCEECCCTT---CCCCCHHHHHHHHHHHHHH--CTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHH-
T ss_pred CeEecCCCC---CCCCHHHHHHHHHHHHHhh--ccCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHH-
Confidence 444444444 3333344455454444321 114679999999999999988865 69999999999988875443
Q ss_pred HcCCCcEEEEcCccc-CCC---CCCceeEEEecccccccccChHHHHHHHH--hhcCCCcEEEEEEC
Q 002884 510 ERGIPAISAVMGTKR-LQF---PRNVFDLVHCARCRVPWHIDGGKLLLELN--RVLRPGGYFVWSAT 570 (870)
Q Consensus 510 ergl~~~~~v~dae~-LPf---pd~SFDlV~Ss~~alhw~~D~~~vL~Ei~--RVLKPGG~Lv~S~~ 570 (870)
..++...+...+... ++. ..++||+|+++.. ++ .....++..+. ++|||||+|+++..
T Consensus 85 ~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 85 RTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp HHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred HcCCceEEEeccHHHHHHhhhccCCceEEEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 344433333334333 221 1347999999753 33 44566777777 99999999999843
No 116
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.12 E-value=2.5e-10 Score=125.03 Aligned_cols=144 Identities=13% Similarity=0.047 Sum_probs=91.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccC--CCCCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRL--QFPRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~L--Pfpd~SFDlV~Ss 538 (870)
...+|||||||+|.++..|+++ +++++|+ +.++..|+.. +...++ +.+.++.+ .... |++ ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQ-TAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHH-HTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHH-HHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4689999999999999888763 7999999 8888877643 333444 23444444 4443 566 789999998
Q ss_pred ccccccccC-hHHHHHHHHhhcCCCcEEEEEECCCcCchhHHH-HHH--H----hhcccccccchhHHHHHHHHHhhccc
Q 002884 539 RCRVPWHID-GGKLLLELNRVLRPGGYFVWSATPVYQKLGEDV-EIW--N----AMSNLTVSMCWELVTIKMDKLNSAGF 610 (870)
Q Consensus 539 ~~alhw~~D-~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~-~~w--~----~~~~la~~mcW~~va~~~~~L~daGf 610 (870)
.++.+|..+ ...+|++++|+|||||.|++............. ..+ . .+......... ...+....+.++||
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMF-HSDDLIRCIENAGL 334 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSC-CHHHHHHHHHTTTE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCccc-CHHHHHHHHHHcCC
Confidence 754445432 268899999999999999998654433221111 000 0 01111111111 23356677888998
Q ss_pred eEEE
Q 002884 611 AIYR 614 (870)
Q Consensus 611 aI~r 614 (870)
.+.+
T Consensus 335 ~~v~ 338 (363)
T 3dp7_A 335 EVEE 338 (363)
T ss_dssp EESC
T ss_pred eEEE
Confidence 8765
No 117
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.12 E-value=2.9e-10 Score=110.10 Aligned_cols=98 Identities=19% Similarity=0.333 Sum_probs=74.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccCCCCC-CceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRLQFPR-NVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~LPfpd-~SFDlV~Ss~~ 540 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..++.. ....++ +.+.+..+ ... +++. +.||+|++...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN-LQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGS 109 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH-HHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCc
Confidence 46789999999999999988875 899999999999887744 334455 34444443 332 3333 58999999743
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++ +...+|.++.++|+|||.|++..
T Consensus 110 -~~---~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 110 -GG---ELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp -TT---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -hH---HHHHHHHHHHHhcCCCcEEEEEe
Confidence 32 46899999999999999999974
No 118
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.12 E-value=9e-11 Score=111.50 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=69.8
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCC--------CCCCce
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQ--------FPRNVF 532 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LP--------fpd~SF 532 (870)
.++.+|||+|||+|.++..|+. ..++++|+++ ++.. ....+...+...++ +++++|
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKV 89 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCce
Confidence 4578999999999998887764 3899999999 6421 12233444555555 777899
Q ss_pred eEEEecccccccccCh-----------HHHHHHHHhhcCCCcEEEEEE
Q 002884 533 DLVHCARCRVPWHIDG-----------GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 533 DlV~Ss~~alhw~~D~-----------~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
|+|+++. .+++.... ..+|.++.++|||||.|+++.
T Consensus 90 D~i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 90 QVVMSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp EEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECC-CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999974 36655444 688999999999999999974
No 119
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.11 E-value=1.2e-10 Score=131.00 Aligned_cols=103 Identities=13% Similarity=0.017 Sum_probs=77.6
Q ss_pred CCCCEEEEECCCCchhHHHHhc---C-CEEEEeCChhhHHHHHHHH------HHHcCC--CcEEEEc-CcccCCCCC--C
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE---R-DVLTMSFAPKDEHDAQIQF------ALERGI--PAISAVM-GTKRLQFPR--N 530 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~---r-~VtgVDiSp~ml~~A~vq~------A~ergl--~~~~~v~-dae~LPfpd--~ 530 (870)
.++.+|||||||+|.++..++. . .|+|||+++.++..|.... +...|+ ..+.++. +...+|+.+ .
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 4688999999999998887764 2 4999999999888776532 233354 3444544 456777754 4
Q ss_pred ceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 531 VFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 531 SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
.||+|+++.. + |..+....|.+++|+|||||.|+++..
T Consensus 252 ~aDVVf~Nn~-~-F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 252 NTSVIFVNNF-A-FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp TCSEEEECCT-T-CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CccEEEEccc-c-cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 7999999753 3 446778899999999999999998743
No 120
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.11 E-value=1.6e-11 Score=127.57 Aligned_cols=147 Identities=10% Similarity=0.121 Sum_probs=83.9
Q ss_pred ccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc
Q 002884 444 FIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVM 520 (870)
Q Consensus 444 F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~ 520 (870)
.+++...+...|... .....+.+|||||||+|.++..|++. .|+|+|+++.|+..|.. +.........
T Consensus 18 vsrg~~kL~~~L~~~----~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~-----~~~~~~~~~~ 88 (232)
T 3opn_A 18 VSRGGLKLEKALKEF----HLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIR-----SDERVVVMEQ 88 (232)
T ss_dssp SSTTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHH-----TCTTEEEECS
T ss_pred cCCcHHHHHHHHHHc----CCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHH-----hCcccccccc
Confidence 345555444444332 22335679999999999999988864 79999999999876542 2111111100
Q ss_pred -C-----cccCC---CCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--c
Q 002884 521 -G-----TKRLQ---FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--L 589 (870)
Q Consensus 521 -d-----ae~LP---fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--l 589 (870)
. ...++ +...+||+|+++ ...+|.+++|+|||||+|++...+.+. ..|..+.. .
T Consensus 89 ~~~~~~~~~~~~~~~~d~~~~D~v~~~---------l~~~l~~i~rvLkpgG~lv~~~~p~~e------~~~~~~~~~G~ 153 (232)
T 3opn_A 89 FNFRNAVLADFEQGRPSFTSIDVSFIS---------LDLILPPLYEILEKNGEVAALIKPQFE------AGREQVGKNGI 153 (232)
T ss_dssp CCGGGCCGGGCCSCCCSEEEECCSSSC---------GGGTHHHHHHHSCTTCEEEEEECHHHH------SCHHHHC-CCC
T ss_pred ceEEEeCHhHcCcCCCCEEEEEEEhhh---------HHHHHHHHHHhccCCCEEEEEECcccc------cCHHHhCcCCe
Confidence 0 11222 233445555443 267999999999999999996422111 11222111 0
Q ss_pred --ccccchhHHHHHHHHHhhccceEEE
Q 002884 590 --TVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 590 --a~~mcW~~va~~~~~L~daGfaI~r 614 (870)
...............+..+||.+..
T Consensus 154 ~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 154 IRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred ecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 0001111233456678888999877
No 121
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.10 E-value=2e-10 Score=120.08 Aligned_cols=97 Identities=19% Similarity=0.155 Sum_probs=73.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||+|||+|.++..+++. .|+|+|+++.++..++. .+...++...+...+... ++++++||+|+++.. .+
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~-n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~-~~- 195 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEA-NAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLY-AE- 195 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHH-HHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECC-HH-
T ss_pred CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChhh-cCcCCCCCEEEECCc-HH-
Confidence 5789999999999998888765 79999999999988874 444556553333333322 245678999999742 22
Q ss_pred ccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 545 HIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 545 ~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
....++.++.++|||||+|+++.
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEe
Confidence 25789999999999999999984
No 122
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.10 E-value=3.5e-10 Score=117.72 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEc-CcccCC--CCCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AISAVM-GTKRLQ--FPRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~-dae~LP--fpd~SFDlV~Ss~ 539 (870)
++.+|||||||+|.++..|+.+ .|+|+|+++.++..|+.. +...++. .+.++. +...++ +++++||+|+|+.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n-~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRS-VAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHH-HHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHH-HHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 5789999999999999998875 799999999999888754 4445554 344444 444443 5678999999974
Q ss_pred ccccc----c---------------cChHHHHHHHHhhcCCCcEEEEE
Q 002884 540 CRVPW----H---------------IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 540 ~alhw----~---------------~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
..+.. . .+...++..+.++|||||+|++.
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 32111 0 11357899999999999999996
No 123
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.10 E-value=3.4e-10 Score=122.05 Aligned_cols=155 Identities=12% Similarity=0.125 Sum_probs=91.2
Q ss_pred cccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-c
Q 002884 445 IHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAV-M 520 (870)
Q Consensus 445 ~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~ 520 (870)
++++..+...|... ....++.+|||||||||.|+..|+.. .|+|+|+++.|++.+.. ......... .
T Consensus 67 srg~~Kl~~~l~~~----~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r-----~~~rv~~~~~~ 137 (291)
T 3hp7_A 67 SRGGLKLEKALAVF----NLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR-----QDDRVRSMEQY 137 (291)
T ss_dssp STTHHHHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH-----TCTTEEEECSC
T ss_pred cchHHHHHHHHHhc----CCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH-----hCcccceeccc
Confidence 44555444444333 22335779999999999999888764 79999999999876431 111111111 1
Q ss_pred CcccCC---CCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcccccccchhH
Q 002884 521 GTKRLQ---FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSNLTVSMCWEL 597 (870)
Q Consensus 521 dae~LP---fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~la~~mcW~~ 597 (870)
+...++ ++..+||+|+|..+ ++ ....+|.+++|+|||||.|++...|-+....+.......+.+ . ......
T Consensus 138 ni~~l~~~~l~~~~fD~v~~d~s-f~---sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd-~-~~~~~~ 211 (291)
T 3hp7_A 138 NFRYAEPVDFTEGLPSFASIDVS-FI---SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRE-S-SIHEKV 211 (291)
T ss_dssp CGGGCCGGGCTTCCCSEEEECCS-SS---CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCC-H-HHHHHH
T ss_pred CceecchhhCCCCCCCEEEEEee-Hh---hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCC-H-HHHHHH
Confidence 222222 34456999999743 43 357899999999999999999755443322221100000000 0 011112
Q ss_pred HHHHHHHHhhccceEEE
Q 002884 598 VTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 598 va~~~~~L~daGfaI~r 614 (870)
.......+.++||.+..
T Consensus 212 ~~~v~~~~~~~Gf~v~~ 228 (291)
T 3hp7_A 212 LETVTAFAVDYGFSVKG 228 (291)
T ss_dssp HHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 22345567788998766
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.09 E-value=2e-10 Score=118.18 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPA-ISAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..|+.. +...+++. +.++.++...++++++||+|+++.
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWEN-IKWAGFDDRVTIKLKDIYEGIEEENVDHVILDL 170 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHHTCTTTEEEECSCGGGCCCCCSEEEEEECS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHH-HHHcCCCCceEEEECchhhccCCCCcCEEEECC
Confidence 46789999999999998887653 799999999999888744 44456554 555555433457888999999852
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.++..+|.++.++|||||+|++..
T Consensus 171 ------~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 171 ------PQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 356789999999999999999874
No 125
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.09 E-value=5.9e-10 Score=119.27 Aligned_cols=144 Identities=13% Similarity=0.127 Sum_probs=93.0
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEc-CcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVM-GTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~-dae~LPfpd~SFDlV~Ss~ 539 (870)
.+..+|||||||+|.++..|++. +++++|++ .++..|+.... ..++. .+.++. +....+++.+ ||+|++..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENAR-IQGVASRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHH-HHTCGGGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHH-hcCCCcceEEEecccccCCCCCC-CcEEEEcc
Confidence 35689999999999999888753 79999999 88888875443 33443 344444 4455677665 99999986
Q ss_pred cccccccC--hHHHHHHHHhhcCCCcEEEEEECCCcCc--hhHHHHH--HHhhcccccccchhHHHHHHHHHhhccceEE
Q 002884 540 CRVPWHID--GGKLLLELNRVLRPGGYFVWSATPVYQK--LGEDVEI--WNAMSNLTVSMCWELVTIKMDKLNSAGFAIY 613 (870)
Q Consensus 540 ~alhw~~D--~~~vL~Ei~RVLKPGG~Lv~S~~p~~~t--L~El~~~--w~~~~~la~~mcW~~va~~~~~L~daGfaI~ 613 (870)
+ +|+..+ ...+|.++.++|+|||+|++........ .+..... +..+........+. .......+.++||.+.
T Consensus 241 ~-l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t-~~~~~~ll~~aGf~~~ 318 (335)
T 2r3s_A 241 F-LHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYT-FAEYESMFSNAGFSHS 318 (335)
T ss_dssp C-GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCC-HHHHHHHHHHTTCSEE
T ss_pred h-hccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCC-HHHHHHHHHHCCCCee
Confidence 5 444433 3799999999999999999885443321 1111111 11110000112222 3356677888999877
Q ss_pred E
Q 002884 614 R 614 (870)
Q Consensus 614 r 614 (870)
+
T Consensus 319 ~ 319 (335)
T 2r3s_A 319 Q 319 (335)
T ss_dssp E
T ss_pred e
Confidence 6
No 126
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.09 E-value=7.4e-10 Score=120.60 Aligned_cols=144 Identities=18% Similarity=0.132 Sum_probs=89.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|++. .++++|+ +.++..++... ...++. .+.++.++..-+++.+ ||+|+++.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~-~D~v~~~~v 257 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRF-ADAGLADRVTVAEGDFFKPLPVT-ADVVLLSFV 257 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHH-HHTTCTTTEEEEECCTTSCCSCC-EEEEEEESC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCCcCCCC-CCEEEEecc
Confidence 35789999999999999888753 7999999 99998887543 344543 4444444321245444 999999875
Q ss_pred ccccccCh--HHHHHHHHhhcCCCcEEEEEEC--CCcCchhHHHHHHHhhcc--cccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDG--GKLLLELNRVLRPGGYFVWSAT--PVYQKLGEDVEIWNAMSN--LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~--p~~~tL~El~~~w~~~~~--la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|+..+. ..+|.++.++|||||+|++... ............+..+.. ......+ ........+.++||.+.+
T Consensus 258 -l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 258 -LLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVR-TRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp -GGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCC-CHHHHHHHHHTTTEEEEE
T ss_pred -ccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCC-CHHHHHHHHHHCCCceEE
Confidence 5444444 4899999999999999998755 322211111111111100 0111112 233556778889998776
No 127
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.09 E-value=4.5e-10 Score=124.18 Aligned_cols=99 Identities=15% Similarity=0.146 Sum_probs=77.0
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..++++ +|+|+|++ .|+..|+ +.+...++. ..+...+...++++ ++||+|+|...
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~ 138 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWM 138 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcCh
Confidence 45789999999999999988875 89999999 8998886 455556654 34444456778877 88999999642
Q ss_pred ccccc---cChHHHHHHHHhhcCCCcEEEEE
Q 002884 541 RVPWH---IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 541 alhw~---~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.++. .....++.++.|+|||||+|+++
T Consensus 139 -~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 139 -GYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp -BTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred -hhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 2332 34678999999999999999865
No 128
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.09 E-value=1.8e-11 Score=125.05 Aligned_cols=99 Identities=17% Similarity=0.110 Sum_probs=76.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEc-CcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI-PAISAVM-GTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~-dae~LPfpd~SFDlV~Ss~~al 542 (870)
++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+. .+...++ +.+.++. +...++ ++++||+|+++.. +
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~-~ 154 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARN-NAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP-W 154 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC-C
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC-c
Confidence 5789999999999999999875 89999999999998874 4455565 3444444 445555 5679999999854 5
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
++..+....+.++.++|+|||++++.
T Consensus 155 ~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcchhhhHHHHHHhhcCCcceeHHH
Confidence 65555566888999999999997764
No 129
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.08 E-value=5.4e-10 Score=120.05 Aligned_cols=140 Identities=16% Similarity=0.097 Sum_probs=88.9
Q ss_pred CEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccCCCCCCceeEEEeccccc
Q 002884 469 RVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 469 ~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~LPfpd~SFDlV~Ss~~al 542 (870)
.+|||||||+|.++..|+++ +++++|+ +.++..++...... ++ +.+.++.+ ... +++ +.||+|++..++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL-LAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH-HHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc-CCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 89999999999999888753 7999999 99988887544332 22 23444444 333 565 6799999987633
Q ss_pred ccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--cccccchhHHHHHHHHHhhccceEEE
Q 002884 543 PWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 543 hw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+| .+. ..+|++++++|||||+|++...............+..+.. ......+ ...+....+.++||.+.+
T Consensus 245 ~~-~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~~e~~~ll~~aGf~~~~ 318 (334)
T 2ip2_A 245 DL-DEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHR-TTEEVVDLLGRGGFAVER 318 (334)
T ss_dssp GC-CHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCC-BHHHHHHHHHHTTEEEEE
T ss_pred CC-CHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCC-CHHHHHHHHHHCCCceeE
Confidence 45 344 4999999999999999999854332211111111111100 0011111 233556778899998766
No 130
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.08 E-value=7e-10 Score=120.82 Aligned_cols=144 Identities=13% Similarity=0.165 Sum_probs=91.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEc-CcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPA-ISAVM-GTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~-dae~LPfpd~SFDlV~Ss~ 539 (870)
.+..+|||||||+|.++..|+++ +++++|+ +.++..++... ...+++. +.++. +....|+++. |+|++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~ 264 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENA-AEKGVADRMRGIAVDIYKESYPEA--DAVLFCR 264 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHH-HHTTCTTTEEEEECCTTTSCCCCC--SEEEEES
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHH-HhcCCCCCEEEEeCccccCCCCCC--CEEEEec
Confidence 45789999999999999888763 7999999 99998887544 3445432 44444 4556677654 9999987
Q ss_pred cccccccC--hHHHHHHHHhhcCCCcEEEEEECCCcCc-hhHHHHHHHhhcccccccc---hhHHHHHHHHHhhccceEE
Q 002884 540 CRVPWHID--GGKLLLELNRVLRPGGYFVWSATPVYQK-LGEDVEIWNAMSNLTVSMC---WELVTIKMDKLNSAGFAIY 613 (870)
Q Consensus 540 ~alhw~~D--~~~vL~Ei~RVLKPGG~Lv~S~~p~~~t-L~El~~~w~~~~~la~~mc---W~~va~~~~~L~daGfaI~ 613 (870)
+ +|...+ ...+|+++.++|||||+|++........ .+.....+..+........ +.........+.++||.+.
T Consensus 265 v-lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v 343 (359)
T 1x19_A 265 I-LYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDV 343 (359)
T ss_dssp C-GGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEE
T ss_pred h-hccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceE
Confidence 5 544344 5889999999999999998875333221 1111111211110111111 0122345667888899876
Q ss_pred E
Q 002884 614 R 614 (870)
Q Consensus 614 r 614 (870)
+
T Consensus 344 ~ 344 (359)
T 1x19_A 344 T 344 (359)
T ss_dssp E
T ss_pred E
Confidence 6
No 131
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.08 E-value=3.6e-10 Score=114.56 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCCCC-----CCcee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQFP-----RNVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LPfp-----d~SFD 533 (870)
++.+|||||||+|.++..|+.. +|+++|+++.++..|+... ...++. .+.++.+ . ..++.. .++||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQML-NFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH-HHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4679999999999999988762 7999999999998887544 444543 3444444 3 234432 27899
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+|++... .++..+...++..+ ++|||||+|++..
T Consensus 137 ~V~~d~~-~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 137 MVFLDHW-KDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp EEEECSC-GGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEEcCC-cccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 9998742 44333445667777 9999999999974
No 132
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.08 E-value=9.1e-10 Score=131.94 Aligned_cols=102 Identities=13% Similarity=0.222 Sum_probs=80.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHH-----cCCCcEEEEc-CcccCCCCCCceeEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALE-----RGIPAISAVM-GTKRLQFPRNVFDLV 535 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~e-----rgl~~~~~v~-dae~LPfpd~SFDlV 535 (870)
++.+|||||||+|.++..|++. +|+|+|+++.|+..|+.+.... .+++.+.++. +...+|+++++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 5789999999999999999864 6999999999999887544432 2445454444 568899999999999
Q ss_pred EecccccccccCh--HHHHHHHHhhcCCCcEEEEEEC
Q 002884 536 HCARCRVPWHIDG--GKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 536 ~Ss~~alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+|..+ ++|..++ ..++.++.|+|||| +|+++++
T Consensus 801 V~~eV-LeHL~dp~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 801 TCLEV-IEHMEEDQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EEESC-GGGSCHHHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EEeCc-hhhCChHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 99864 6666654 36899999999999 7777743
No 133
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.08 E-value=3.8e-10 Score=110.55 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC-CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPWH 545 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~ 545 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.|+.. .....+...+... ++++++||+|+|+.. +++.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~-~~~~ 91 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPP-YVPD 91 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCC-CBTT
T ss_pred CCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCC-CccC
Confidence 4679999999999999999877 89999999997654 1122334444444 677789999999854 5543
Q ss_pred cC---------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 546 ID---------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 546 ~D---------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.+ ...++.++.+.| |||.|++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 33 367899999999 999999973
No 134
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.06 E-value=8.4e-10 Score=119.68 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=80.8
Q ss_pred HHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEE-EEcCccc
Q 002884 450 HYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AIS-AVMGTKR 524 (870)
Q Consensus 450 ~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~-~v~dae~ 524 (870)
.|...|.+.+.. .++.+|||||||+|.++..+++. +|+|+|+++ |+..|+. .+...++. .+. ...+...
T Consensus 25 ~y~~ai~~~~~~----~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~-~~~~~~~~~~i~~~~~d~~~ 98 (328)
T 1g6q_1 25 SYRNAIIQNKDL----FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKE-LVELNGFSDKITLLRGKLED 98 (328)
T ss_dssp HHHHHHHHHHHH----HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHH-HHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHhhHhh----cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHH-HHHHcCCCCCEEEEECchhh
Confidence 455555444332 24679999999999999888864 799999994 8877763 44455553 333 4445677
Q ss_pred CCCCCCceeEEEeccc--ccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 525 LQFPRNVFDLVHCARC--RVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 525 LPfpd~SFDlV~Ss~~--alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+++++++||+|+|... .+++......+|.++.|+|||||+|+..
T Consensus 99 ~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 99 VHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp SCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8888889999999632 1223345678999999999999999843
No 135
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.06 E-value=3.2e-10 Score=116.32 Aligned_cols=99 Identities=11% Similarity=0.135 Sum_probs=76.3
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCC-CCCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQ-FPRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LP-fpd~SFDlV~Ss 538 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...++. .+.++.+ . ..+| ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQ-NLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 4679999999999999998872 89999999999988874 44455653 4445444 3 3344 447899999985
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. +......+|.++.++|||||+|++...
T Consensus 150 ~----~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 A----AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp T----TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred C----cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 3 345568899999999999999999643
No 136
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.06 E-value=1e-09 Score=115.33 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=74.4
Q ss_pred CCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
++.+|||||||+|.++..|+. ..|+++|+++.++..++. .+...+++.+.++.++..-++++++||+|+|+...+
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~-n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQR-NAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 467999999999999988874 389999999999988874 444456655555554422244567899999974211
Q ss_pred c------------cc------------cChHHHHHHHHhhcCCCcEEEEE
Q 002884 543 P------------WH------------IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 543 h------------w~------------~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
. +. .....++.++.++|||||+|++.
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1 11 12367889999999999999997
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.06 E-value=4.4e-10 Score=111.73 Aligned_cols=96 Identities=16% Similarity=0.033 Sum_probs=74.2
Q ss_pred CCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~a 541 (870)
++.+|||||||+|.++..|+. ..|+++|+++.++..++. .+...++..+.++. +...++ +.++||+|+++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQ-VQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec--
Confidence 367999999999999888874 389999999999988874 44455665444444 445554 467899999863
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+ .+...++.++.++|+|||+|++..
T Consensus 141 ~---~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 141 F---ASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp S---SSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred c---CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 456899999999999999999973
No 138
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=5.8e-10 Score=116.66 Aligned_cols=97 Identities=19% Similarity=0.040 Sum_probs=75.5
Q ss_pred CCCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCC---CCceeEEEe
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFP---RNVFDLVHC 537 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfp---d~SFDlV~S 537 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..++. .+...++.++.++. +.+.++.. .++||+|+|
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 3578999999999998877764 389999999999988874 45556665555544 44666543 478999999
Q ss_pred cccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 538 ARCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 538 s~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.. + .+...++..+.++|||||+|++.
T Consensus 158 ~a--~---~~~~~ll~~~~~~LkpgG~l~~~ 183 (249)
T 3g89_A 158 RA--V---APLCVLSELLLPFLEVGGAAVAM 183 (249)
T ss_dssp ES--S---CCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CC--c---CCHHHHHHHHHHHcCCCeEEEEE
Confidence 63 2 35688999999999999999986
No 139
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.06 E-value=3.4e-10 Score=120.84 Aligned_cols=101 Identities=11% Similarity=0.115 Sum_probs=71.0
Q ss_pred CCCEEEEECCCCch----hHHHHhc--------CCEEEEeCChhhHHHHHHHHH---HHcCC------------------
Q 002884 467 YTRVSLDVGCGVAS----FGGYLFE--------RDVLTMSFAPKDEHDAQIQFA---LERGI------------------ 513 (870)
Q Consensus 467 ~~~~VLDIGCGtG~----~a~~La~--------r~VtgVDiSp~ml~~A~vq~A---~ergl------------------ 513 (870)
+..+|||+|||+|. ++..|++ ..|+|+|+|+.|+..|+.... ..+++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999997 5554543 279999999999988874310 00000
Q ss_pred ----------CcEEEEcCcccCCCC-CCceeEEEecccccccccCh--HHHHHHHHhhcCCCcEEEEE
Q 002884 514 ----------PAISAVMGTKRLQFP-RNVFDLVHCARCRVPWHIDG--GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 514 ----------~~~~~v~dae~LPfp-d~SFDlV~Ss~~alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.+.+...+....|++ .+.||+|+|..+ ++|..+. ..++.+++++|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv-liyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV-MIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS-GGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc-hHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 122333444555665 578999999865 5554444 79999999999999999985
No 140
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=9.6e-10 Score=110.07 Aligned_cols=97 Identities=19% Similarity=0.231 Sum_probs=72.1
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCC-CCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFP-RNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfp-d~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..++... ...+++.+.++.+....+++ .++||+|++..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTL-RKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHHTCTTEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCeEEEECCcccCCCCCCCeeEEEECC
Confidence 4578999999999998887765 47999999999998887443 34455555555443333444 67899999985
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+ +++.. .++.++|||||.|++...
T Consensus 155 ~-~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 155 A-GPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp B-BSSCC------HHHHHTEEEEEEEEEEES
T ss_pred c-hHHHH------HHHHHHcCCCcEEEEEEC
Confidence 4 55433 488999999999999853
No 141
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.05 E-value=1.3e-10 Score=112.86 Aligned_cols=100 Identities=14% Similarity=0.024 Sum_probs=73.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-ccc-CCCCCCceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKR-LQFPRNVFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~-LPfpd~SFDlV~Ss~~ 540 (870)
++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+. .+...++. .+.++.+ ... ++..++.||+|+++..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQD-NIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 5679999999999999888764 79999999999988874 44445553 3444444 333 4444567999999742
Q ss_pred ccccccChHHHHHHHH--hhcCCCcEEEEEE
Q 002884 541 RVPWHIDGGKLLLELN--RVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~--RVLKPGG~Lv~S~ 569 (870)
++ ......++..+. ++|+|||+|++..
T Consensus 110 -~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 110 -YA-KETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp -SH-HHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -CC-cchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 22 133466777776 9999999999984
No 142
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.05 E-value=3.5e-10 Score=118.93 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=76.5
Q ss_pred CCCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHc-CCCcEEEEcCcccCCCCCCceeEEEec
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALER-GIPAISAVMGTKRLQFPRNVFDLVHCA 538 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~er-gl~~~~~v~dae~LPfpd~SFDlV~Ss 538 (870)
..++.+|||+|||+|.++..|+. ..|+++|+++.++..++.. +... |.+.+.++.++..-++++++||+|++.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDN-LSEFYDIGNVRTSRSDIADFISDQMYDAVIAD 186 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHH-HHTTSCCTTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH-HHhcCCCCcEEEEECchhccCcCCCccEEEEc
Confidence 34678999999999998888764 3799999999998887743 3344 555555555543336777899999984
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
.+++..+|.++.++|||||+|+++.+
T Consensus 187 ------~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 187 ------IPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp ------CSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred ------CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 24567899999999999999999853
No 143
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.05 E-value=2.8e-10 Score=123.92 Aligned_cols=100 Identities=15% Similarity=0.140 Sum_probs=75.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
...+|||||||+|.++..|+.. .|+++|+++.++..++... ...++...+...+.. .+.+++||+|+|+.. +
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~~~~~d~~--~~~~~~fD~Iv~~~~-~ 271 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL-AANGVEGEVFASNVF--SEVKGRFDMIISNPP-F 271 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTT--TTCCSCEEEEEECCC-C
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCCEEEEcccc--ccccCCeeEEEECCC-c
Confidence 3568999999999999888753 7999999999998887543 445555444444433 344778999999864 5
Q ss_pred ccc-----cChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 543 PWH-----IDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 543 hw~-----~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
|+. .+...+|.++.|+|||||.|++...
T Consensus 272 ~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 272 HDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 541 2347899999999999999999843
No 144
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.04 E-value=4.2e-10 Score=114.97 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=70.4
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cCccc----CCCCCCceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAV-MGTKR----LQFPRNVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~dae~----LPfpd~SFDlV~ 536 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..+... +... +++.++ .+... ++++ ++||+|+
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~--~~v~~~~~d~~~~~~~~~~~-~~~D~v~ 148 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA-CAER--ENIIPILGDANKPQEYANIV-EKVDVIY 148 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHH-TTTC--TTEEEEECCTTCGGGGTTTS-CCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHH-hhcC--CCeEEEECCCCCcccccccC-ccEEEEE
Confidence 35789999999999998888753 799999999988777632 3222 344444 44555 6776 7899999
Q ss_pred ecccccccccCh---HHHHHHHHhhcCCCcEEEEE
Q 002884 537 CARCRVPWHIDG---GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 537 Ss~~alhw~~D~---~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+. + .++ ..+|.++.|+|||||+|+++
T Consensus 149 ~~---~---~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 ED---V---AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EC---C---CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ee---c---CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 43 1 233 77899999999999999996
No 145
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.04 E-value=3.8e-10 Score=115.17 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=71.6
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-Cccc---CCCCCCceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKR---LQFPRNVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~---LPfpd~SFDlV~ 536 (870)
.++.+|||||||+|.++..|++ ..|+|+|+++.++..+. +.+..+ +.+.++. +... +|+.+++||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKR--TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHC--TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhcc--CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 4578999999999999988865 37999999998876654 445544 3344444 4433 566678999999
Q ss_pred ecccccccccCh-HHHHHHHHhhcCCCcEEEEEE
Q 002884 537 CARCRVPWHIDG-GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 537 Ss~~alhw~~D~-~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+... ..+. ..++.++.++|||||+|+++.
T Consensus 153 ~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 153 ADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9642 2223 556888999999999999973
No 146
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.04 E-value=6.7e-10 Score=117.64 Aligned_cols=96 Identities=9% Similarity=0.066 Sum_probs=75.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEc-CcccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPA-ISAVM-GTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~-dae~LPfpd~SFDlV~Ss~~a 541 (870)
++.+|||+|||+|.++..++.. .|+|+|+++.++..|+. .+...++.. +.++. +...++. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~-n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p- 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV- 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC-
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc-
Confidence 4789999999999999988763 49999999999998874 455556653 44444 4555555 788999998631
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.....++.++.++|||||+|++..
T Consensus 202 ----~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ----hhHHHHHHHHHHHCCCCeEEEEEE
Confidence 234688999999999999999874
No 147
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.04 E-value=3.1e-10 Score=123.34 Aligned_cols=141 Identities=15% Similarity=0.030 Sum_probs=84.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.+..+|||||||+|.++..|+++ .++++|+++ ++. . +.+...+. +.+.++.++...++| +||+|++..+
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~-~~~~~~~~~~~v~~~~~d~~~~~p--~~D~v~~~~v 256 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R-HRLDAPDVAGRWKVVEGDFLREVP--HADVHVLKRI 256 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T-CCCCCGGGTTSEEEEECCTTTCCC--CCSEEEEESC
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c-ccccccCCCCCeEEEecCCCCCCC--CCcEEEEehh
Confidence 35789999999999999888763 688899843 322 1 11111122 234444443224555 7999999865
Q ss_pred ccccccCh--HHHHHHHHhhcCCCcEEEEEECCCcCchhHHHHHHHhhcc--cccccchhHHHHHHHHHhhccceEEE
Q 002884 541 RVPWHIDG--GKLLLELNRVLRPGGYFVWSATPVYQKLGEDVEIWNAMSN--LTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 541 alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL~El~~~w~~~~~--la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
+|+..+. ..+|++++|+|||||+|++...............+..+.. ......+. ..+....+.++||.+.+
T Consensus 257 -lh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t-~~e~~~ll~~aGf~~~~ 332 (348)
T 3lst_A 257 -LHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERT-AAELEPLFTAAGLRLDR 332 (348)
T ss_dssp -GGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCB-HHHHHHHHHHTTEEEEE
T ss_pred -ccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCC-HHHHHHHHHHCCCceEE
Confidence 5544555 6999999999999999999864333221111111111000 01111111 33566778899998876
No 148
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=9.2e-10 Score=112.88 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEE-EcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISA-VMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~-v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..++.......+.+.+.+ ..+...+++++++||+|++..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL 174 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC
Confidence 46789999999999988877643 799999999999888755444314444444 445566678888999999842
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.++..+|.++.++|||||+|++..
T Consensus 175 ------~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 175 ------MEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 356689999999999999999984
No 149
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.03 E-value=6.7e-10 Score=120.49 Aligned_cols=142 Identities=17% Similarity=0.193 Sum_probs=90.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+.. .++++|+ +.++..++... ...++. .+.++.++..-+++.+ ||+|++..+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~-~D~v~~~~v 258 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYL-KDEGLSDRVDVVEGDFFEPLPRK-ADAIILSFV 258 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHH-HHTTCTTTEEEEECCTTSCCSSC-EEEEEEESC
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHH-HhcCCCCceEEEeCCCCCCCCCC-ccEEEEccc
Confidence 35689999999999999888753 6889999 88888877443 344543 3444444322245544 999999865
Q ss_pred ccccccCh--HHHHHHHHhhcCCCcEEEEEECC-CcCch----hHHHHHHHhhcccccccchhHHHHHHHHHhhccceEE
Q 002884 541 RVPWHIDG--GKLLLELNRVLRPGGYFVWSATP-VYQKL----GEDVEIWNAMSNLTVSMCWELVTIKMDKLNSAGFAIY 613 (870)
Q Consensus 541 alhw~~D~--~~vL~Ei~RVLKPGG~Lv~S~~p-~~~tL----~El~~~w~~~~~la~~mcW~~va~~~~~L~daGfaI~ 613 (870)
+|+..+. ..+|.++.++|||||+|++.... ..... ......+... ......+ ........+.++||.+.
T Consensus 259 -l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-t~~e~~~ll~~aGf~~~ 334 (360)
T 1tw3_A 259 -LLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLV--FLGGALR-TREKWDGLAASAGLVVE 334 (360)
T ss_dssp -GGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHH--HHSCCCC-BHHHHHHHHHHTTEEEE
T ss_pred -ccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhh--hcCCcCC-CHHHHHHHHHHCCCeEE
Confidence 5444444 58999999999999999998544 22211 1111111100 0111112 23356677888999877
Q ss_pred E
Q 002884 614 R 614 (870)
Q Consensus 614 r 614 (870)
+
T Consensus 335 ~ 335 (360)
T 1tw3_A 335 E 335 (360)
T ss_dssp E
T ss_pred E
Confidence 6
No 150
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.03 E-value=1.9e-10 Score=117.42 Aligned_cols=99 Identities=10% Similarity=0.133 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
+..+|||||||+|.++..++.. .|+++|+++.|+..++. .+...|+...+.+.+.... .+.++||+|++.. ++
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~-~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k-~L 125 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSS-IIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLK-ML 125 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHH-HHHHSCCSSEEEEECCHHH-HTTSEEEEEEEET-CH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCccEEEeccccc-CCCCCcChhhHhh-HH
Confidence 4789999999999999999543 89999999999999884 4556677633333444322 4568899999975 58
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
|...+...++..+++.|||||+||-.
T Consensus 126 HlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 126 PVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred HhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 87766677888999999999999865
No 151
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.02 E-value=6.8e-11 Score=116.86 Aligned_cols=99 Identities=10% Similarity=-0.032 Sum_probs=58.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCC-----CceeEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPR-----NVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd-----~SFDlV 535 (870)
.++.+|||+|||+|.++..|+.. .|+|+|+++.++..++... ...+. .+.++. +... ++++ ++||+|
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~-~~~~~~~d~~~-~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA-ERFGA-VVDWAAADGIE-WLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHH-HHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHhCC-ceEEEEcchHh-hhhhhhhccCcccEE
Confidence 46789999999999999888764 8999999999988776433 23333 222333 3333 5555 899999
Q ss_pred EecccccccccCh--------------------------HHHHHHHHhhcCCCcE-EEEE
Q 002884 536 HCARCRVPWHIDG--------------------------GKLLLELNRVLRPGGY-FVWS 568 (870)
Q Consensus 536 ~Ss~~alhw~~D~--------------------------~~vL~Ei~RVLKPGG~-Lv~S 568 (870)
+|+.. ++..... ..++.++.++|||||+ +++.
T Consensus 106 ~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 106 VSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp EECCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred EECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99743 2111110 6788899999999999 5554
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.02 E-value=8.6e-10 Score=111.64 Aligned_cols=96 Identities=14% Similarity=0.104 Sum_probs=69.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..+.... ...+ ...+...+.......+++||+|++..+ ++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~-~~ 145 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLL-SYYN-NIKLILGDGTLGYEEEKPYDRVVVWAT-AP 145 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTCS-SEEEEESCGGGCCGGGCCEEEEEESSB-BS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHH-hhcC-CeEEEECCcccccccCCCccEEEECCc-HH
Confidence 45789999999999999988874 8999999999888776433 2223 233334444442224678999999854 55
Q ss_pred cccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 544 WHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 544 w~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+.. .++.++|||||+|++...
T Consensus 146 ~~~------~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 146 TLL------CKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SCC------HHHHHTEEEEEEEEEEEC
T ss_pred HHH------HHHHHHcCCCcEEEEEEc
Confidence 433 478999999999999843
No 153
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.02 E-value=6.3e-10 Score=110.04 Aligned_cols=91 Identities=18% Similarity=0.266 Sum_probs=65.7
Q ss_pred CCCCEEEEECCCCchhHHHHhc------CCEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCcccCC------------
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE------RDVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGTKRLQ------------ 526 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~------r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~dae~LP------------ 526 (870)
.++.+|||||||+|.++..|+. ..|+|+|+++.. ..+ ..+...+...++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------------CCCCceEEEccccchhhhhhcccccccc
Confidence 3567999999999999988864 369999999941 112 233344455555
Q ss_pred -------------CCCCceeEEEecccccccc----cCh-------HHHHHHHHhhcCCCcEEEEEE
Q 002884 527 -------------FPRNVFDLVHCARCRVPWH----IDG-------GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 527 -------------fpd~SFDlV~Ss~~alhw~----~D~-------~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++++||+|+|+. .++|. .+. ..+|.++.++|||||.|++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDA-AVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCC-CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 5678999999974 35553 122 137899999999999999873
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.02 E-value=1e-09 Score=114.03 Aligned_cols=100 Identities=15% Similarity=0.092 Sum_probs=75.3
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEc-Ccc-cCCCC--CCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVM-GTK-RLQFP--RNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~-dae-~LPfp--d~SFDlV~ 536 (870)
++.+|||||||+|..+..|+.. .|+++|+++.++..|+. .+...++. .+.++. +.. .++.. .++||+|+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE-NLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 4689999999999999888764 79999999999988874 44445554 444444 432 24433 34899999
Q ss_pred ecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 CARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+.. +..+...+|.++.++|||||+|++....
T Consensus 142 ~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDA----DKPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECS----CGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECC----chHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 853 2345678999999999999999998543
No 155
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.01 E-value=1.1e-09 Score=114.08 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=77.0
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcC--CCcEEEEc-CcccCCCCCCceeEEEe
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERG--IPAISAVM-GTKRLQFPRNVFDLVHC 537 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~erg--l~~~~~v~-dae~LPfpd~SFDlV~S 537 (870)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..|........+ .+.+.++. +...+++++++||+|++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 4678999999999999888865 2799999999999888755544313 34444444 45667788889999998
Q ss_pred cccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 538 ARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 538 s~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
.. .++..+|.++.++|+|||+|++..+
T Consensus 178 ~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 178 DM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp ES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 52 3556899999999999999999843
No 156
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.01 E-value=1.1e-09 Score=119.68 Aligned_cols=111 Identities=15% Similarity=0.217 Sum_probs=79.4
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-CcEEE-EcCcccC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI-PAISA-VMGTKRL 525 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~-v~dae~L 525 (870)
|.+.|.+.+.. .++.+|||||||+|.++..++++ .|+|+|+++ |+..|+ +.+...++ +.+.+ ..+...+
T Consensus 38 y~~~i~~~l~~----~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~-~~~~~~~l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 38 YQRAILQNHTD----FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHHHHTGGG----TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHhcccc----CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHH-HHHHHcCCCCcEEEEEcchhhC
Confidence 44444444332 35789999999999999888764 799999996 776665 34445555 33444 4445667
Q ss_pred CCCCCceeEEEecccccccc-cChHHHHHHHHhhcCCCcEEEEE
Q 002884 526 QFPRNVFDLVHCARCRVPWH-IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 526 Pfpd~SFDlV~Ss~~alhw~-~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+++ ++||+|+|.....|+. ......+.++.|+|||||+|+++
T Consensus 112 ~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 112 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 766 5799999975544444 33468888999999999999965
No 157
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.01 E-value=1.5e-09 Score=116.79 Aligned_cols=102 Identities=15% Similarity=0.157 Sum_probs=71.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHc----CCCcEEEEc-Cc-ccCCCCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALER----GIPAISAVM-GT-KRLQFPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~er----gl~~~~~v~-da-e~LPfpd~SFDlV~ 536 (870)
...+|||||||+|.++..|++. .|+++|+++.++..|+..+.... ..+.+.++. +. ..++...++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4689999999999999998875 69999999999988876544321 122333443 43 33445578999999
Q ss_pred ecccccccccCh----HHHHHHHHhhcCCCcEEEEEE
Q 002884 537 CARCRVPWHIDG----GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 537 Ss~~alhw~~D~----~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+.. ..++.... ..++.++.|+|||||+|++..
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 963 23433221 679999999999999999874
No 158
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.00 E-value=9.4e-10 Score=112.57 Aligned_cols=97 Identities=22% Similarity=0.266 Sum_probs=72.9
Q ss_pred CCCCEEEEECCCCchhHHHHhc---CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCC-ceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE---RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRN-VFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~---r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~-SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..|+.. ....++..+.++.++...++++. .||+|++...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~- 167 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRN-LERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG- 167 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHH-HHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB-
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHHcCCCCcEEEECCcccCCCCCCCccEEEECCc-
Confidence 4577999999999999988876 4899999999998887743 34456555555554435566654 4999999753
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+++.. .++.++|||||+|+++..
T Consensus 168 ~~~~~------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 168 APKIP------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp BSSCC------HHHHHTEEEEEEEEEEEC
T ss_pred HHHHH------HHHHHhcCCCcEEEEEEe
Confidence 44432 378999999999999853
No 159
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.00 E-value=7e-10 Score=118.76 Aligned_cols=101 Identities=21% Similarity=0.162 Sum_probs=68.1
Q ss_pred CCCEEEEECCCCc--hhHHHHh-----cCCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCC----CC--CCce
Q 002884 467 YTRVSLDVGCGVA--SFGGYLF-----ERDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQ----FP--RNVF 532 (870)
Q Consensus 467 ~~~~VLDIGCGtG--~~a~~La-----~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LP----fp--d~SF 532 (870)
..+.|||||||++ .....++ ..+|+++|.||.|+..|+..... .+...+.++. +...++ .+ .+.|
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-TPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC-CSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc-CCCCcEEEEEecccChhhhhccccccccc
Confidence 4679999999973 2233222 34899999999999888744321 1222344444 444331 11 3456
Q ss_pred e-----EEEecccccccccC---hHHHHHHHHhhcCCCcEEEEEE
Q 002884 533 D-----LVHCARCRVPWHID---GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 533 D-----lV~Ss~~alhw~~D---~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
| +|+++ .++||..+ +..+|.++.++|+|||+|+++.
T Consensus 157 D~~~p~av~~~-avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 157 DLTRPVALTVI-AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp CTTSCCEEEEE-SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred CcCCcchHHhh-hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 6 46665 56999977 4689999999999999999984
No 160
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.99 E-value=1.2e-09 Score=112.19 Aligned_cols=97 Identities=14% Similarity=0.234 Sum_probs=74.0
Q ss_pred CCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcCc--ccCC-CCCCceeEEEe
Q 002884 468 TRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIP--AISAVMGT--KRLQ-FPRNVFDLVHC 537 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~da--e~LP-fpd~SFDlV~S 537 (870)
..+|||||||+|..+..|+. ..|+++|+++.++..|+. .....++. .+.++.+. ..++ +++++||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKA-LFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 45999999999998888875 279999999999988874 44455654 45555542 3333 44689999998
Q ss_pred cccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. +..+...++.++.|+|||||+|++..
T Consensus 136 d~----~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QV----SPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CC----CTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cC----cHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 63 23456789999999999999999863
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.99 E-value=1.4e-09 Score=117.08 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=73.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--C---EEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--D---VLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~---VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|++. . |+++|+++.++..|+. .+...+++.+.++. +....+.++++||+|++..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~-~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKR-NVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTV 152 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCeEEEECChhhccccCCCeEEEEEcC
Confidence 46789999999999999888764 4 9999999999988874 44455665544444 4455444567899999985
Q ss_pred cccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. +++.. .++.++|||||+|+++.
T Consensus 153 ~-~~~~~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 153 G-VDEVP------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp B-BSCCC------HHHHHHEEEEEEEEEEB
T ss_pred C-HHHHH------HHHHHhcCCCcEEEEEE
Confidence 4 55433 57899999999999984
No 162
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.99 E-value=1.1e-09 Score=113.09 Aligned_cols=101 Identities=20% Similarity=0.222 Sum_probs=74.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHc-------CCCcEEEEc-Cccc-CC--CCCCc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALER-------GIPAISAVM-GTKR-LQ--FPRNV 531 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~er-------gl~~~~~v~-dae~-LP--fpd~S 531 (870)
++.+|||||||+|.++..|+.. .|+|+|+++.++..+.......+ +++++.++. +... ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999888763 69999999999988875443321 555555544 4443 66 77899
Q ss_pred eeEEEecccccccccC--------hHHHHHHHHhhcCCCcEEEEE
Q 002884 532 FDLVHCARCRVPWHID--------GGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 532 FDlV~Ss~~alhw~~D--------~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
||.|+.... -.|... ...+|.++.++|+|||+|++.
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 999986531 222111 048999999999999999997
No 163
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.98 E-value=1.2e-09 Score=109.50 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=73.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEc-Cc-ccCCCCCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVM-GT-KRLQFPRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~-da-e~LPfpd~SFDlV~Ss 538 (870)
+..+|||||||+|..+..|+.. .|+++|+++.++..|+..+. ..++. .+.++. +. ..++..++ ||+|++.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 4679999999999999888754 79999999999988875443 34443 344444 33 33455556 9999986
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. ...+...++.++.++|||||+|++...
T Consensus 134 ~----~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 134 C----DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T----TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C----ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 235668999999999999999998743
No 164
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.98 E-value=1.2e-09 Score=123.76 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=75.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHH--HH----HHHHHcC--CCcEEEEcC-cccC--CC--C
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDA--QI----QFALERG--IPAISAVMG-TKRL--QF--P 528 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A--~v----q~A~erg--l~~~~~v~d-ae~L--Pf--p 528 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..| +. +.+...| ...+.++.+ .... ++ .
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 46789999999999999888763 699999999988877 22 2333446 345555543 3222 22 2
Q ss_pred CCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 529 RNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 529 d~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
.++||+|+++.. + +..+...+|.++.|+|||||.|++..+
T Consensus 321 ~~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 321 IPQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp GGGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cCCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 478999998753 3 446678899999999999999999743
No 165
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.98 E-value=6.9e-10 Score=111.91 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCCC-C----CCcee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQF-P----RNVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LPf-p----d~SFD 533 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..++.. ....++. .+.++.+ . ..++. . .++||
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEY-WEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH-HHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 4679999999999999988763 799999999999888744 4445554 2444443 3 22321 1 17899
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+|++.. +..+...++.++.++|||||+|++....
T Consensus 143 ~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 143 LIYIDA----DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 999753 3455688999999999999999998543
No 166
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.97 E-value=1.9e-09 Score=118.58 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=86.0
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~ 540 (870)
....+|||||||+|.++..|+++ +++++|+ +.++..+. . .+.+.++.+ ... |+|.+ |+|++..+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~--~~~v~~~~~d~~~-~~p~~--D~v~~~~v 270 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----A--FSGVEHLGGDMFD-GVPKG--DAIFIKWI 270 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C--CTTEEEEECCTTT-CCCCC--SEEEEESC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----h--cCCCEEEecCCCC-CCCCC--CEEEEech
Confidence 34689999999999999888763 7899999 77654432 1 234455554 343 77754 99999876
Q ss_pred ccccccC-hHHHHHHHHhhcCCCcEEEEEECCCcCch----hHHHHHHHhhccc---ccccchhHHHHHHHHHhhccceE
Q 002884 541 RVPWHID-GGKLLLELNRVLRPGGYFVWSATPVYQKL----GEDVEIWNAMSNL---TVSMCWELVTIKMDKLNSAGFAI 612 (870)
Q Consensus 541 alhw~~D-~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL----~El~~~w~~~~~l---a~~mcW~~va~~~~~L~daGfaI 612 (870)
+.+|..+ ...+|++++|+|||||+|++......... ......+..+..+ ..... +...+....+.++||.+
T Consensus 271 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~-rt~~e~~~ll~~AGF~~ 349 (368)
T 3reo_A 271 CHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKE-RTEKEFQALAMASGFRG 349 (368)
T ss_dssp GGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCC-CCHHHHHHHHHHTTCCE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCcc-CCHHHHHHHHHHCCCee
Confidence 3345432 25889999999999999999864433221 1111111111111 01111 12335667789999988
Q ss_pred EE
Q 002884 613 YR 614 (870)
Q Consensus 613 ~r 614 (870)
.+
T Consensus 350 v~ 351 (368)
T 3reo_A 350 FK 351 (368)
T ss_dssp EE
T ss_pred eE
Confidence 76
No 167
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.97 E-value=1.5e-09 Score=113.86 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH---cCCC-cEEE-EcCcccC-------CCCC
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE---RGIP-AISA-VMGTKRL-------QFPR 529 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e---rgl~-~~~~-v~dae~L-------Pfpd 529 (870)
.++.+|||||||+|.++..|+.+ .|+++|+++.++..|+... .. .++. .+.+ ..+...+ ++++
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~-~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSL-ELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHT-TSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 35679999999999999888754 7999999999988877433 33 3443 2333 4444444 3677
Q ss_pred CceeEEEecccccc----------------cc-cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 530 NVFDLVHCARCRVP----------------WH-IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 530 ~SFDlV~Ss~~alh----------------w~-~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++||+|+|+.-.+. .. .....+|..+.++|||||+|++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 89999999732111 11 125788999999999999999873
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.96 E-value=5.8e-10 Score=115.17 Aligned_cols=101 Identities=16% Similarity=0.007 Sum_probs=69.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC------CEEEEeCChhhHHHHHHHHHHHc--CCC------------------------
Q 002884 467 YTRVSLDVGCGVASFGGYLFER------DVLTMSFAPKDEHDAQIQFALER--GIP------------------------ 514 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r------~VtgVDiSp~ml~~A~vq~A~er--gl~------------------------ 514 (870)
...+|||+|||+|.++..|+.. +|+|+|+++.++..|+....... ++.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 4679999999999988877642 79999999999988774332210 111
Q ss_pred ---cE-------------EEEcCcccCCC------CCCceeEEEecccccccc--------cChHHHHHHHHhhcCCCcE
Q 002884 515 ---AI-------------SAVMGTKRLQF------PRNVFDLVHCARCRVPWH--------IDGGKLLLELNRVLRPGGY 564 (870)
Q Consensus 515 ---~~-------------~~v~dae~LPf------pd~SFDlV~Ss~~alhw~--------~D~~~vL~Ei~RVLKPGG~ 564 (870)
.. +...+... ++ ....||+|+|+...++.. .....+|.++.++|||||+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFD-PRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTC-GGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhccccccccccceeeccccc-ccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 11 34444333 22 345899999975322221 1125899999999999999
Q ss_pred EEEE
Q 002884 565 FVWS 568 (870)
Q Consensus 565 Lv~S 568 (870)
|+++
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9996
No 169
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.96 E-value=1.2e-09 Score=110.31 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEcC-c-ccCC-CC---CCceeE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPA-ISAVMG-T-KRLQ-FP---RNVFDL 534 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~d-a-e~LP-fp---d~SFDl 534 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+.. ....++.. +.++.+ . ..++ ++ .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN-IERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 4689999999999999988764 799999999999888744 44455543 444443 3 2222 11 267999
Q ss_pred EEecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 535 VHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 535 V~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
|++... ......+|.++.++|||||+|++....
T Consensus 137 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 137 IFIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EEECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 998632 345578999999999999999987443
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.95 E-value=4.1e-09 Score=107.41 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=74.3
Q ss_pred CCCCEEEEECCCCchhHHHHhc--CCEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE--RDVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~--r~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..|+... ...++ +...++.+ .....++++.||+|+++.
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~-- 166 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL-KKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV-- 166 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH-HHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS--
T ss_pred CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCCcEEEEEcChhhcccCCCcccEEEECC--
Confidence 4578999999999999888876 48999999999998887443 34454 34444444 333333667899999852
Q ss_pred cccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.++..+|.++.++|||||.|++..
T Consensus 167 ----~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 167 ----REPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp ----SCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred ----cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 356688999999999999999984
No 171
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.95 E-value=2.8e-09 Score=112.96 Aligned_cols=117 Identities=15% Similarity=0.112 Sum_probs=77.5
Q ss_pred cHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeC-ChhhHHHHHHHHH----HHcCCC----
Q 002884 447 GALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSF-APKDEHDAQIQFA----LERGIP---- 514 (870)
Q Consensus 447 gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDi-Sp~ml~~A~vq~A----~ergl~---- 514 (870)
+.....+++..... ..++.+|||||||+|.++..|+.. .|+++|+ ++.++..++.... ...++.
T Consensus 63 ~~~~l~~~l~~~~~----~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~ 138 (281)
T 3bzb_A 63 GARALADTLCWQPE----LIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKR 138 (281)
T ss_dssp HHHHHHHHHHHCGG----GTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------
T ss_pred HHHHHHHHHHhcch----hcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCC
Confidence 34444455544332 134679999999999998888764 7999999 8999988875442 223332
Q ss_pred -cEEEE-cCc----ccCC--CCCCceeEEEecccccccccChHHHHHHHHhhcC---C--CcEEEEE
Q 002884 515 -AISAV-MGT----KRLQ--FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLR---P--GGYFVWS 568 (870)
Q Consensus 515 -~~~~v-~da----e~LP--fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLK---P--GG~Lv~S 568 (870)
.+.+. .+. ..+. ++++.||+|+++.+ +++..+...++..+.++|+ | ||.+++.
T Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv-l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 139 ASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADL-LSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESC-CSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred CCeEEEEecCCCccHHHHhhccCCCCCEEEEeCc-ccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 22222 221 1111 03578999999765 5556677999999999999 9 9988776
No 172
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.94 E-value=2.3e-09 Score=117.50 Aligned_cols=91 Identities=18% Similarity=0.217 Sum_probs=68.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~a 541 (870)
+..+|||||||+|.++..|+++ .++++|+ +.++..+. + .+.+.++.+ ... +++. ||+|+++.+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~-----~--~~~v~~~~~d~~~-~~~~--~D~v~~~~~- 276 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP-----P--LSGIEHVGGDMFA-SVPQ--GDAMILKAV- 276 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C--CTTEEEEECCTTT-CCCC--EEEEEEESS-
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-----h--cCCCEEEeCCccc-CCCC--CCEEEEecc-
Confidence 4689999999999999988764 5788899 87665443 1 233444444 434 6665 999999865
Q ss_pred cccccChH--HHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGG--KLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~--~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+|+..+.. .+|++++|+|||||+|++..
T Consensus 277 lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 277 CHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 56555555 99999999999999999874
No 173
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.93 E-value=3e-10 Score=110.71 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=68.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCC---CCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFERDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQF---PRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPf---pd~SFDlV~Ss~~al 542 (870)
+++.+|||||||. +++|+++.|+..|+.+.. ....+...+...+++ ++++||+|+|+. ++
T Consensus 11 ~~g~~vL~~~~g~------------v~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~-~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS------------SPVEALKGLVDKLQALTG----NEGRVSVENIKQLLQSAHKESSFDIILSGL-VP 73 (176)
T ss_dssp CTTSEEEEEECTT------------SCHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGGCCCSSCEEEEEECC-ST
T ss_pred CCCCEEEEecCCc------------eeeeCCHHHHHHHHHhcc----cCcEEEEechhcCccccCCCCCEeEEEECC-hh
Confidence 4688999999996 238999988877664321 124455556677776 889999999986 47
Q ss_pred ccc-cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWH-IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~-~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
||. .+...+|.+++|+|||||+|++..
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 877 888999999999999999999973
No 174
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.92 E-value=7e-09 Score=113.11 Aligned_cols=102 Identities=16% Similarity=0.007 Sum_probs=77.9
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||+|||+|.++..++. ..|+|+|+++.++..|+. .+...|+. ..+...+...++.+...||+|+|+.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~-n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~np 280 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLARE-AALASGLSWIRFLRADARHLPRFFPEVDRILANP 280 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHH-HHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHH-HHHHcCCCceEEEeCChhhCccccCCCCEEEECC
Confidence 4578999999999998877765 489999999999998874 45556664 4455556678887777899999974
Q ss_pred cccccccC--------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 540 CRVPWHID--------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 540 ~alhw~~D--------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. +.+... ...++.++.++|||||.+++.+
T Consensus 281 P-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 281 P-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp C-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred C-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 2 221111 1578999999999999999984
No 175
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.92 E-value=5.2e-09 Score=105.69 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=70.7
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcC-----CCcEEE-EcCcccCCCCCCceeE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERG-----IPAISA-VMGTKRLQFPRNVFDL 534 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~erg-----l~~~~~-v~dae~LPfpd~SFDl 534 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..++..... .+ ...+.+ ..+....+...+.||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK-DDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 4578999999999998887764 3799999999999888754433 22 233334 4444444555678999
Q ss_pred EEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 535 VHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 535 V~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
|++... ++ .++.++.++|||||+|+++..
T Consensus 155 i~~~~~-~~------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAA-AP------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSB-BS------SCCHHHHHTEEEEEEEEEEES
T ss_pred EEECCc-hH------HHHHHHHHhcCCCcEEEEEEe
Confidence 998743 32 234688999999999999843
No 176
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.91 E-value=4.6e-09 Score=115.48 Aligned_cols=138 Identities=17% Similarity=0.128 Sum_probs=86.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~ 540 (870)
.+..+|||||||+|.++..|+++ .++++|+ |.++..|. . .+.+.++.+ ... |+|.+ |+|++..+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~--~~~v~~~~~D~~~-~~p~~--D~v~~~~v 268 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----Q--FPGVTHVGGDMFK-EVPSG--DTILMKWI 268 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C--CTTEEEEECCTTT-CCCCC--SEEEEESC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----h--cCCeEEEeCCcCC-CCCCC--CEEEehHH
Confidence 35689999999999999888763 7899999 76654432 1 234555554 444 77765 99999876
Q ss_pred cccccc-ChHHHHHHHHhhcCCCcEEEEEECCCcCch--h--HHHHHHHhhccc--ccccchhHHHHHHHHHhhccceEE
Q 002884 541 RVPWHI-DGGKLLLELNRVLRPGGYFVWSATPVYQKL--G--EDVEIWNAMSNL--TVSMCWELVTIKMDKLNSAGFAIY 613 (870)
Q Consensus 541 alhw~~-D~~~vL~Ei~RVLKPGG~Lv~S~~p~~~tL--~--El~~~w~~~~~l--a~~mcW~~va~~~~~L~daGfaI~ 613 (870)
+.+|.. +...+|++++++|||||+|++......... . .....+..+.-+ ......+...+....+.++||.+.
T Consensus 269 lh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v 348 (364)
T 3p9c_A 269 LHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGV 348 (364)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEE
T ss_pred hccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceE
Confidence 444542 236899999999999999999854433211 1 100011111111 001111223356677889999887
Q ss_pred E
Q 002884 614 R 614 (870)
Q Consensus 614 r 614 (870)
+
T Consensus 349 ~ 349 (364)
T 3p9c_A 349 K 349 (364)
T ss_dssp E
T ss_pred E
Confidence 6
No 177
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.91 E-value=3.6e-09 Score=107.17 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=68.6
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cCcccC---CCCCCceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAV-MGTKRL---QFPRNVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~dae~L---Pfpd~SFDlV~ 536 (870)
.++.+|||+|||+|.++..|++ ..|+++|+++.++..+.. .+... +.+.++ .+.... +...++||+|+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~-~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVP-IVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHH-HHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHH-HHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 3578999999999999988874 379999999998877653 33322 334444 444331 22245899999
Q ss_pred ecccccccccCh-HHHHHHHHhhcCCCcEEEEE
Q 002884 537 CARCRVPWHIDG-GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 537 Ss~~alhw~~D~-~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+... ..+. ..++.++.++|||||+|++.
T Consensus 149 ~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 8632 2333 35599999999999999997
No 178
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.90 E-value=2e-09 Score=109.63 Aligned_cols=98 Identities=12% Similarity=0.199 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-ccc-CCCC--CCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKR-LQFP--RNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~-LPfp--d~SFDlV~S 537 (870)
++.+|||||||+|.++..|+. ..|+++|+++.++..|+..+ ...++. .+.++.+ ... ++.. +++||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHV-KALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHH-HHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 467999999999998888875 37999999999988887443 344553 3444443 333 3433 578999998
Q ss_pred cccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
... ..+...+|.++.++|||||+|++..
T Consensus 133 ~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 642 2367899999999999999999973
No 179
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.90 E-value=4.2e-09 Score=107.00 Aligned_cols=96 Identities=18% Similarity=0.293 Sum_probs=70.5
Q ss_pred CCCCEEEEECCCCchhHHHHhc----------CCEEEEeCChhhHHHHHHHHHHHcC-----CCcEEEEcCcccCCCCC-
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE----------RDVLTMSFAPKDEHDAQIQFALERG-----IPAISAVMGTKRLQFPR- 529 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~----------r~VtgVDiSp~ml~~A~vq~A~erg-----l~~~~~v~dae~LPfpd- 529 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.++..++...... + ...+.++.++...++++
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD-DRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH-HHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc-CccccCCCceEEEECCcccCCCcC
Confidence 4578999999999998887765 27999999999998887554432 2 23344444432235555
Q ss_pred CceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 530 NVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 530 ~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++||+|++... +++. +.++.++|||||+|++..
T Consensus 162 ~~fD~I~~~~~-~~~~------~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAA-APDT------PTELINQLASGGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSC-BSSC------CHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCc-hHHH------HHHHHHHhcCCCEEEEEE
Confidence 78999999753 4432 378999999999999984
No 180
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.89 E-value=3.5e-09 Score=104.06 Aligned_cols=92 Identities=16% Similarity=0.175 Sum_probs=63.7
Q ss_pred CCCCEEEEECCCCchhHHHHhc-------------CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-c-CcccCC----
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-------------RDVLTMSFAPKDEHDAQIQFALERGIPAISAV-M-GTKRLQ---- 526 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-------------r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~-dae~LP---- 526 (870)
.++.+|||||||+|.++..|+. ..|+++|+++.. .++...++ . +....+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------------cCCCCeEEEeccCCCHHHHHH
Confidence 4578999999999999888865 359999999842 12223333 3 322221
Q ss_pred ----CCCCceeEEEeccc---ccccccCh-------HHHHHHHHhhcCCCcEEEEEE
Q 002884 527 ----FPRNVFDLVHCARC---RVPWHIDG-------GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 527 ----fpd~SFDlV~Ss~~---alhw~~D~-------~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++++||+|+|..+ ..+|..+. ..+|.++.|+|||||.|++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 34568999999632 12222333 478999999999999999984
No 181
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.89 E-value=5.2e-09 Score=112.50 Aligned_cols=103 Identities=14% Similarity=0.131 Sum_probs=72.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHH---HcCCCcEEEE-cCcccCCC--CCCceeEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFAL---ERGIPAISAV-MGTKRLQF--PRNVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~---ergl~~~~~v-~dae~LPf--pd~SFDlV 535 (870)
..+.+|||||||+|.++..|++. .|+++|+++.++..++..+.. ....+.+.++ .+...++. ++++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 35689999999999999998864 799999999998887754421 1112334444 44444432 47889999
Q ss_pred EecccccccccCh----HHHHHHHHhhcCCCcEEEEEE
Q 002884 536 HCARCRVPWHIDG----GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~~D~----~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++... .++.... ..++.++.|+|||||+|++..
T Consensus 174 i~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 174 IIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99643 4432222 688999999999999999974
No 182
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.89 E-value=2.7e-09 Score=115.32 Aligned_cols=105 Identities=15% Similarity=0.178 Sum_probs=75.4
Q ss_pred CCCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEec
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCA 538 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss 538 (870)
..++.+|||+|||+|..+..|+. ..|+++|+++.++..++. .+...|+..+.++. +...++..+++||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRL-NLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHH-HHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 34678999999999998888874 269999999999988874 44455665555554 445555456789999973
Q ss_pred c-----cccccccC----------------hHHHHHHHHhhcCCCcEEEEEEC
Q 002884 539 R-----CRVPWHID----------------GGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 539 ~-----~alhw~~D----------------~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
. ..++.+++ ...+|.++.++|||||+|++++.
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 1 11221111 14889999999999999999854
No 183
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.89 E-value=4.4e-09 Score=109.81 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=67.8
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cCcccCC---CCCCceeEE
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISAV-MGTKRLQ---FPRNVFDLV 535 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~dae~LP---fpd~SFDlV 535 (870)
..++.+|||||||+|.++..|++. .|+|+|+++.|+.... +.+..+ .++..+ .++.... ...++||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~-~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELL-LVAQRR--PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHH-HHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHH-HHhhhc--CCeEEEEcccccchhhhccccceEEE
Confidence 356899999999999999888753 7999999999875433 344444 234444 4443221 224689999
Q ss_pred EecccccccccChHH-HHHHHHhhcCCCcEEEEEE
Q 002884 536 HCARCRVPWHIDGGK-LLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~~D~~~-vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++... . .+... ++..+.++|||||+|+++.
T Consensus 151 ~~d~a-~---~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 151 YVDIA-Q---PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EECCC-C---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCC-C---hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99742 2 34444 4456667999999999983
No 184
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.89 E-value=8.6e-10 Score=123.63 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=69.7
Q ss_pred CCCEEEEECCC------CchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCC------C
Q 002884 467 YTRVSLDVGCG------VASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFP------R 529 (870)
Q Consensus 467 ~~~~VLDIGCG------tG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfp------d 529 (870)
+..+||||||| +|..+..++. ..|+|+|+++.|. .......+.+.+...+||. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 46899999999 6655444442 3899999999872 1222234455566788887 7
Q ss_pred CceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 530 NVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 530 ~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++||+|+|.. .|+..+...+|.+++|+|||||+|++.+
T Consensus 287 ~sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 287 GPFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp CCEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999999973 4555677899999999999999999984
No 185
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.89 E-value=2.4e-09 Score=113.51 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=65.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-CEEEEeCChhhHHHHHHHHHHHcCC-------CcEEE--EcCcccCCCCCCceeEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-DVLTMSFAPKDEHDAQIQFALERGI-------PAISA--VMGTKRLQFPRNVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-~VtgVDiSp~ml~~A~vq~A~ergl-------~~~~~--v~dae~LPfpd~SFDlV 535 (870)
.++.+|||||||+|.++..|+++ .|+|+|+++ |+..+ .+... ...+. ..+...+| +++||+|
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a-----~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 144 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGG-----HEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVI 144 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSS-----CCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhh-----hhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEE
Confidence 45789999999999999999875 899999999 53211 11111 22333 33445555 7889999
Q ss_pred EecccccccccC----hH---HHHHHHHhhcCCCc--EEEEEE
Q 002884 536 HCARCRVPWHID----GG---KLLLELNRVLRPGG--YFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~~D----~~---~vL~Ei~RVLKPGG--~Lv~S~ 569 (870)
+|..+ +...+ .. .+|.++.|+||||| .|++..
T Consensus 145 ~sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 145 MCDVG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEeCc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 99743 32222 12 37899999999999 999874
No 186
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.89 E-value=1e-08 Score=112.23 Aligned_cols=101 Identities=17% Similarity=0.186 Sum_probs=73.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cCC--CcEEEEc-Cccc-CC-CCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RGI--PAISAVM-GTKR-LQ-FPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rgl--~~~~~v~-dae~-LP-fpd~SFDlV~ 536 (870)
...+|||||||+|.++..|+++ +|+++|+++.++..|+..+... .++ +.+.++. +... ++ +++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4689999999999999999865 7999999999998887554331 122 3344444 4332 22 3567899999
Q ss_pred eccccccccc--C--hHHHHHHHHhhcCCCcEEEEE
Q 002884 537 CARCRVPWHI--D--GGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 537 Ss~~alhw~~--D--~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+.. ..+++. + ...++.++.|+|+|||+|++.
T Consensus 200 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 963 233321 1 368999999999999999997
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.89 E-value=7.9e-10 Score=114.95 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCCCC-----CCcee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQFP-----RNVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LPfp-----d~SFD 533 (870)
++.+|||||||+|..+..|+.. .|+++|+++.++..|+. .+...++. .+.++.+ . ..++.. .++||
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~-~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHP-YWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHH-HHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 4679999999999999888762 79999999999888774 44445553 4445444 3 223322 47899
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+|++.. +..+...+|.++.++|||||+|++....
T Consensus 139 ~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 139 FIFIDA----DKTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEES----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEEcC----ChHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 999863 2445678999999999999999997544
No 188
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.88 E-value=5.8e-09 Score=109.41 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=73.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cccCCCCCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TKRLQFPRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae~LPfpd~SFDlV~Ss 538 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..|+.. +...++ +.+.++.+ .... +++++||+|+++
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~ 188 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESN-LTKWGLIERVTIKVRDISEG-FDEKDVDALFLD 188 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHH-HHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH-HHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC
Confidence 45789999999999988877643 799999999998888743 344454 34444444 3333 667889999985
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. .++..+|.++.++|+|||.|++..
T Consensus 189 ~------~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 189 V------PDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp C------SCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred C------cCHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 356689999999999999999984
No 189
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.88 E-value=1.6e-09 Score=117.10 Aligned_cols=101 Identities=17% Similarity=0.211 Sum_probs=67.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-CEEEEeC----ChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-DVLTMSF----APKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-~VtgVDi----Sp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||||||+|.++..|+++ .|+|+|+ ++.++..+. ....+.+.+.++.+.....++.++||+|+|..+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~ 157 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIG 157 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCCcCCCCEEEECCc
Confidence 45789999999999999999886 7999999 554331110 011122455566552223334678999999643
Q ss_pred c--cccccChH---HHHHHHHhhcCCCcEEEEEE
Q 002884 541 R--VPWHIDGG---KLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 a--lhw~~D~~---~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. .+|..+.. .+|.++.|+|||||.|++..
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 1 12322322 57899999999999999874
No 190
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.88 E-value=4.7e-09 Score=110.93 Aligned_cols=98 Identities=16% Similarity=0.148 Sum_probs=76.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEeccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~ 540 (870)
.++.+|||+|||+|.++..|+.. .|+++|+++.++..|+. .+...++.+..++. +...++. .+.||+|++...
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p 195 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYV 195 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCC
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCc
Confidence 45789999999999999988763 79999999999988874 45556665554544 4455544 678999999743
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
.+...++.++.++|||||+|+++..
T Consensus 196 -----~~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 196 -----HKTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----ccHHHHHHHHHHHcCCCCEEEEEEc
Confidence 1567889999999999999998843
No 191
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.88 E-value=3.6e-09 Score=115.08 Aligned_cols=134 Identities=14% Similarity=0.097 Sum_probs=85.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~a 541 (870)
+..+|||||||+|.++..|+++ +++++|+ +.++..+. + .+.+.++.+ ... +++. ||+|++..+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~--~~~v~~~~~d~~~-~~p~--~D~v~~~~~- 255 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS-----G--SNNLTYVGGDMFT-SIPN--ADAVLLKYI- 255 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----C--BTTEEEEECCTTT-CCCC--CSEEEEESC-
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc-----c--CCCcEEEeccccC-CCCC--ccEEEeehh-
Confidence 4679999999999999988753 7999999 88765443 1 123444444 333 5653 999999875
Q ss_pred cccccChH--HHHHHHHhhcCC---CcEEEEEECCCcCc--h---hHHHHHHHhhccc-ccccchhHHHHHHHHHhhccc
Q 002884 542 VPWHIDGG--KLLLELNRVLRP---GGYFVWSATPVYQK--L---GEDVEIWNAMSNL-TVSMCWELVTIKMDKLNSAGF 610 (870)
Q Consensus 542 lhw~~D~~--~vL~Ei~RVLKP---GG~Lv~S~~p~~~t--L---~El~~~w~~~~~l-a~~mcW~~va~~~~~L~daGf 610 (870)
+|+..+.. .+|++++|+||| ||+|++........ . .+. ..+..+..+ .....+ ...+....+.++||
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~-~~~~d~~~~~~~g~~~-t~~e~~~ll~~aGf 333 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQI-KLLMDVNMACLNGKER-NEEEWKKLFIEAGF 333 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHH-HHHHHHHGGGGTCCCE-EHHHHHHHHHHTTC
T ss_pred hccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhh-HhhccHHHHhccCCCC-CHHHHHHHHHHCCC
Confidence 55445555 999999999999 99999985433221 1 111 111111000 011112 23356677888999
Q ss_pred eEEE
Q 002884 611 AIYR 614 (870)
Q Consensus 611 aI~r 614 (870)
.+.+
T Consensus 334 ~~~~ 337 (352)
T 1fp2_A 334 QHYK 337 (352)
T ss_dssp CEEE
T ss_pred CeeE
Confidence 8765
No 192
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.88 E-value=6.5e-10 Score=118.60 Aligned_cols=94 Identities=17% Similarity=0.186 Sum_probs=66.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-CEEEEeCChhhHHHHHHHHHHHcCC-------CcEEE--EcCcccCCCCCCceeEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-DVLTMSFAPKDEHDAQIQFALERGI-------PAISA--VMGTKRLQFPRNVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-~VtgVDiSp~ml~~A~vq~A~ergl-------~~~~~--v~dae~LPfpd~SFDlV 535 (870)
.++.+|||||||+|.++..|+++ .|+|+|+++ |+..+ .++.. ...+. ..+...+| +++||+|
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~a-----~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V 152 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTSG-----HEKPRLVETFGWNLITFKSKVDVTKME--PFQADTV 152 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCTT-----SCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhhh-----hhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEE
Confidence 45789999999999999999875 899999999 63221 11121 22333 33455555 6889999
Q ss_pred EecccccccccC----hH---HHHHHHHhhcCCCc--EEEEEE
Q 002884 536 HCARCRVPWHID----GG---KLLLELNRVLRPGG--YFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~~D----~~---~vL~Ei~RVLKPGG--~Lv~S~ 569 (870)
+|..+ ++..+ .. .+|.++.|+||||| .|++..
T Consensus 153 vsd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 153 LCDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 99743 32222 11 37899999999999 999863
No 193
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.87 E-value=7e-09 Score=112.08 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=68.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHc------C----CCcEEE-EcCcccC--CC
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALER------G----IPAISA-VMGTKRL--QF 527 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~er------g----l~~~~~-v~dae~L--Pf 527 (870)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..|+....... + ...+.+ ..+...+ ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 4678999999999998888765 379999999999988886554321 1 123334 4444444 56
Q ss_pred CCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 528 PRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 528 pd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
++++||+|++.. .++..++.++.++|||||.|++..
T Consensus 184 ~~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 184 KSLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ----EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred CCCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEe
Confidence 778899999863 123348999999999999999874
No 194
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.87 E-value=1.9e-09 Score=111.70 Aligned_cols=93 Identities=11% Similarity=0.101 Sum_probs=68.7
Q ss_pred CCCEEEEECCCCchhHHHHhc--------CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-Cccc---CCCCC-Ccee
Q 002884 467 YTRVSLDVGCGVASFGGYLFE--------RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKR---LQFPR-NVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~--------r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~---LPfpd-~SFD 533 (870)
++.+|||||||+|..+..|++ ..|+|+|+++.|+..|+ ... +.+.++. +... +++.. .+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~-~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDM-ENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGC-TTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccC-CceEEEECcchhHHHHHhhccCCCC
Confidence 357999999999998887754 38999999999876554 122 3344444 4444 35444 4799
Q ss_pred EEEecccccccccChHHHHHHHHh-hcCCCcEEEEEE
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNR-VLRPGGYFVWSA 569 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~R-VLKPGG~Lv~S~ 569 (870)
+|++... | .+...+|.++.| +|||||+|++.+
T Consensus 155 ~I~~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 155 LIFIDNA--H--ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEEEESS--C--SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EEEECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 9998632 3 467889999998 999999999973
No 195
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.87 E-value=1.2e-09 Score=112.79 Aligned_cols=101 Identities=14% Similarity=0.152 Sum_probs=66.7
Q ss_pred CCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEc-Cccc--C-CCC---CCceeE
Q 002884 467 YTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPA-ISAVM-GTKR--L-QFP---RNVFDL 534 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~-dae~--L-Pfp---d~SFDl 534 (870)
++.+|||||||+|.++..|+. ..|+|+|+++.|+..|+.. +...++.. +.++. +... + +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKN-VEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 467999999999998877764 3899999999999988854 44456542 44444 3333 1 455 368999
Q ss_pred EEecccccccc--------------cChHHHHHHHHhhcCCCcEEEEE
Q 002884 535 VHCARCRVPWH--------------IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 535 V~Ss~~alhw~--------------~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
|+|+...++.. .....++.+++|+|||||.|++.
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99984322211 01124578899999999998775
No 196
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.86 E-value=7.2e-09 Score=104.74 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=71.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---------CEEEEeCChhhHHHHHHHHHHHcC-----CCcEEEEc-CcccCC----
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---------DVLTMSFAPKDEHDAQIQFALERG-----IPAISAVM-GTKRLQ---- 526 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---------~VtgVDiSp~ml~~A~vq~A~erg-----l~~~~~v~-dae~LP---- 526 (870)
.++.+|||||||+|.++..|+.. .|+++|+++.++..|+..... .+ ...+.++. +....+
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKR-DKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHH-cCccccccCCEEEEECChHhcccccC
Confidence 35789999999999988887652 799999999999888754443 34 34444444 444444
Q ss_pred CCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 527 FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 527 fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+..+.||+|++... +++ ++.++.++|||||+|++..
T Consensus 158 ~~~~~fD~I~~~~~-~~~------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 158 KELGLFDAIHVGAS-ASE------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHCCEEEEEECSB-BSS------CCHHHHHHEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCc-hHH------HHHHHHHhcCCCcEEEEEE
Confidence 45678999999743 443 3588899999999999984
No 197
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.85 E-value=3.8e-09 Score=110.08 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCCC------CCCce
Q 002884 467 YTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQF------PRNVF 532 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LPf------pd~SF 532 (870)
+..+|||||||+|..+..|+. ..|+++|+++.++..|+.. ....++. .+.++.+ . ..++. ++++|
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPV-IKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 467999999999998887764 3899999999999888744 3445553 3444443 3 23332 25789
Q ss_pred eEEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 533 DLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 533 DlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
|+|++.. +..+...++.++.++|||||+|++...
T Consensus 158 D~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 158 DFIFVDA----DKDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp SEEEECS----CSTTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEEEcC----chHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 9999863 234568999999999999999998743
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.85 E-value=1e-08 Score=114.06 Aligned_cols=113 Identities=14% Similarity=0.160 Sum_probs=79.1
Q ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEc-Ccc
Q 002884 449 LHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AISAVM-GTK 523 (870)
Q Consensus 449 ~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~-dae 523 (870)
..|.+.|.+....+ ++.+|||||||+|.++...++. +|+|+|.++ |+..|+ +.++..|+. .+.++. +.+
T Consensus 69 ~aY~~Ai~~~~~~~----~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~-~~~~~n~~~~~i~~i~~~~~ 142 (376)
T 4hc4_A 69 DAYRLGILRNWAAL----RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAR-EVVRFNGLEDRVHVLPGPVE 142 (376)
T ss_dssp HHHHHHHHTTHHHH----TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHH-HHHHHTTCTTTEEEEESCTT
T ss_pred HHHHHHHHhCHHhc----CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHH-HHHHHcCCCceEEEEeeeee
Confidence 44555554432221 4789999999999888776654 799999997 777766 556666664 344444 456
Q ss_pred cCCCCCCceeEEEecc--cccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 524 RLQFPRNVFDLVHCAR--CRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 524 ~LPfpd~SFDlV~Ss~--~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.+.+| +.||+|+|-. ..+.+......++....|.|||||.++.+
T Consensus 143 ~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 143 TVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred eecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 77776 5799999831 12333345688999999999999999843
No 199
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.85 E-value=5.6e-09 Score=119.50 Aligned_cols=99 Identities=14% Similarity=0.252 Sum_probs=73.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEc-CcccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI-PAISAVM-GTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~-dae~LPfpd~SFDlV~Ss~~a 541 (870)
++.+|||||||+|.++..++.. +|+|+|+++ ++..|+ +.+...++ ..+.++. +...++++ +.||+|+|+...
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~-~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAE-VLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 234 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCH
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHH-HHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCch
Confidence 5689999999999999888764 799999998 887766 44555565 3444444 45666665 579999997532
Q ss_pred cccc-cChHHHHHHHHhhcCCCcEEEEE
Q 002884 542 VPWH-IDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 542 lhw~-~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.++. .+....|.++.++|||||+|++.
T Consensus 235 ~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred HhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3332 22356778899999999999964
No 200
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.85 E-value=1.5e-08 Score=107.92 Aligned_cols=113 Identities=17% Similarity=0.194 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhc---CCEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEcCcccC
Q 002884 450 HYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFE---RDVLTMSFAPKDEHDAQIQFALERGIPA-ISAVMGTKRL 525 (870)
Q Consensus 450 ~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~---r~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~dae~L 525 (870)
.+.+.+...+.. .++.+|||||||+|.++..|+. ..|+|+|+++.++..|+. .+...++.. +.++.++..-
T Consensus 110 ~lv~~~l~~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~-n~~~~~l~~~v~~~~~D~~~ 184 (284)
T 1nv8_A 110 ELVELALELIRK----YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARK-NAERHGVSDRFFVRKGEFLE 184 (284)
T ss_dssp HHHHHHHHHHHH----HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHH-HHHHTTCTTSEEEEESSTTG
T ss_pred HHHHHHHHHhcc----cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEEECcchh
Confidence 344444444332 1457999999999999888875 389999999999998874 455556653 4454443211
Q ss_pred CCCCCce---eEEEecccccc----------cc--------cChHHHHHHHH-hhcCCCcEEEEE
Q 002884 526 QFPRNVF---DLVHCARCRVP----------WH--------IDGGKLLLELN-RVLRPGGYFVWS 568 (870)
Q Consensus 526 Pfpd~SF---DlV~Ss~~alh----------w~--------~D~~~vL~Ei~-RVLKPGG~Lv~S 568 (870)
+++ ++| |+|+|+.-.+. |. .+...+++++. +.|+|||+|++.
T Consensus 185 ~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 185 PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 333 478 99999731111 11 11227899999 999999999996
No 201
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.84 E-value=8e-09 Score=106.05 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=73.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCc-----ccCCCCC--Ccee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGT-----KRLQFPR--NVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~da-----e~LPfpd--~SFD 533 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+..+. ..++. .+.++.+. ..+++.+ ++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQ-KAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4679999999999999888763 79999999999988875443 34543 34444432 2344444 7899
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+|++.. ...+...++.++.++|||||+|++...
T Consensus 151 ~V~~d~----~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDA----DKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECS----CGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECC----CHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999863 234568899999999999999999743
No 202
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.83 E-value=5.8e-09 Score=113.67 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhhh--hcCC-CCCEEEEECCCCchhHHHHhc-C---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cC
Q 002884 450 HYIDFIQQAVPKI--AWGK-YTRVSLDVGCGVASFGGYLFE-R---DVLTMSFAPKDEHDAQIQFALERGIPAISAV-MG 521 (870)
Q Consensus 450 ~Yid~L~~~Lp~i--~~g~-~~~~VLDIGCGtG~~a~~La~-r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~d 521 (870)
.|.+.|...+..+ .... +..+|||||||+|.++..|++ . +|+++|+++.++..|+..+... ..+.+.++ .+
T Consensus 69 ~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~D 147 (317)
T 3gjy_A 69 EYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDD 147 (317)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESC
T ss_pred HHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECc
Confidence 4666555544321 1121 234999999999999999887 2 7999999999887776443221 12334444 44
Q ss_pred cccC--CCCCCceeEEEecccccccc----cChHHHHHHHHhhcCCCcEEEEEE
Q 002884 522 TKRL--QFPRNVFDLVHCARCRVPWH----IDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 522 ae~L--Pfpd~SFDlV~Ss~~alhw~----~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
...+ .+++++||+|++.. ..++. .....++.+++|+|+|||+|++..
T Consensus 148 a~~~l~~~~~~~fDvIi~D~-~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 148 ARMVAESFTPASRDVIIRDV-FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp HHHHHHTCCTTCEEEEEECC-STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhhccCCCCCEEEECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 3322 35578999999963 23322 122789999999999999999874
No 203
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.82 E-value=1e-08 Score=103.02 Aligned_cols=91 Identities=13% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cCcccCCC--------C---CCc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAV-MGTKRLQF--------P---RNV 531 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~dae~LPf--------p---d~S 531 (870)
.++.+|||||||+|.++..|+++ .|+|+|+++.. .++.+.++ .+....+. . .++
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~------------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME------------EIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC------------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc------------cCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 46789999999999999999875 89999999852 12333344 44444431 1 148
Q ss_pred eeEEEecccccc----cccC-------hHHHHHHHHhhcCCCcEEEEEE
Q 002884 532 FDLVHCARCRVP----WHID-------GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 532 FDlV~Ss~~alh----w~~D-------~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
||+|+|... .. +..+ ...+|..+.++|||||.|++..
T Consensus 92 ~D~Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 92 VDDVVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp EEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999999632 21 1111 1467889999999999999873
No 204
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.82 E-value=7.4e-09 Score=106.16 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=72.4
Q ss_pred CCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEcC-c-ccCC------------
Q 002884 467 YTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPA-ISAVMG-T-KRLQ------------ 526 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~d-a-e~LP------------ 526 (870)
++.+|||||||+|.++..|+. ..|+++|+++.++..|+..+ ...++.. +.++.+ . ..++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYW-KENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 467999999999998888864 37999999999988887443 3445543 444433 2 2122
Q ss_pred --CCC--CceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 527 --FPR--NVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 527 --fpd--~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
|++ ++||+|++.. ...+...+|.++.++|||||+|++..
T Consensus 139 ~~f~~~~~~fD~I~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDA----DKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTTCCSTTCEEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccCCCCCcCEEEEeC----CHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 7899999863 23455789999999999999999974
No 205
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.82 E-value=1.2e-08 Score=108.32 Aligned_cols=102 Identities=13% Similarity=0.116 Sum_probs=74.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC--CCcEEEEc-Ccc-cCCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG--IPAISAVM-GTK-RLQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg--l~~~~~v~-dae-~LPfpd~SFDlV~S 537 (870)
.+.+|||||||+|.++..++++ +|+++|+++.++..|+..+..- .+ .+.+.++. +.. .++...++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4689999999999999998864 7999999999998887544321 12 23444444 432 24445678999999
Q ss_pred cccccccccC----hHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHID----GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D----~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
... .++... ...++.++.|+|+|||+|++..
T Consensus 155 d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 155 DST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp SCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 642 333221 2689999999999999999973
No 206
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.79 E-value=1.6e-08 Score=114.44 Aligned_cols=106 Identities=15% Similarity=0.214 Sum_probs=77.1
Q ss_pred CCCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCC--CCCCceeEEE
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQ--FPRNVFDLVH 536 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LP--fpd~SFDlV~ 536 (870)
..++.+|||+|||+|..+..|+. ..|+++|+++.++..+.. .+...|+..+.++. +...++ +++++||+|+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKD-FVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHH-HHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 34678999999999998888875 379999999999887763 44555775555544 445555 5667899999
Q ss_pred e-----cccccccccCh----------------HHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 C-----ARCRVPWHIDG----------------GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 S-----s~~alhw~~D~----------------~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+ ....++.+++. ..+|.++.++|||||+|++++..
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 6 22223322222 46899999999999999998543
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.79 E-value=1.6e-08 Score=110.32 Aligned_cols=103 Identities=11% Similarity=-0.021 Sum_probs=73.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCc--EEEEcC-cccC-CC---CCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPA--ISAVMG-TKRL-QF---PRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~--~~~v~d-ae~L-Pf---pd~SFDlV~S 537 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..|+.+. ...++.. +.++.+ ...+ +. ..+.||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~-~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQ-VLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-HHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHH-HHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4679999999999999988865 7999999999999888544 4445542 444444 3332 21 1568999999
Q ss_pred ccccc---------ccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 538 ARCRV---------PWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 538 s~~al---------hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
..-.+ ++..+...++.++.++|+|||+|++...
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 53211 1223457899999999999999887643
No 208
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.79 E-value=4.8e-09 Score=122.06 Aligned_cols=101 Identities=17% Similarity=0.120 Sum_probs=76.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcC-CCcEEEEcCcccC--CCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERG-IPAISAVMGTKRL--QFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~erg-l~~~~~v~dae~L--Pfpd~SFDlV~Ss~~a 541 (870)
++.+|||||||.|.++..|++. .|+|||+++.++..|+ ..|.+.| +.+.+.+.+.+.+ ++.++.||+|+|..+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~- 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR-ALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV- 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC-
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc-
Confidence 3579999999999999999976 8999999999999988 4566665 4444445555666 567889999999865
Q ss_pred cccccChH--HHHHHHHhhcCCCcEEEEEE
Q 002884 542 VPWHIDGG--KLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 542 lhw~~D~~--~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+++..++. ..+..+.+.|+++|..++..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 66666653 34556778888887766553
No 209
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.79 E-value=1.6e-08 Score=109.28 Aligned_cols=102 Identities=16% Similarity=0.150 Sum_probs=75.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHH-HcC---CCcEEEEc-Cccc-CCCCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFAL-ERG---IPAISAVM-GTKR-LQFPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~-erg---l~~~~~v~-dae~-LPfpd~SFDlV~ 536 (870)
...+|||||||+|.++..|+++ +|+++|+++.++..|+..+.. ..+ .+.+.++. +... ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4689999999999999999865 799999999999888755433 122 23444444 4332 444568899999
Q ss_pred eccccccc---cc--C--hHHHHHHHHhhcCCCcEEEEEE
Q 002884 537 CARCRVPW---HI--D--GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 537 Ss~~alhw---~~--D--~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+.. ..++ .. . ...++.++.|+|||||+|++..
T Consensus 157 ~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 157 IDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 974 3454 21 1 2689999999999999999873
No 210
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.79 E-value=1.5e-08 Score=108.61 Aligned_cols=102 Identities=14% Similarity=0.080 Sum_probs=72.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC--CCcEEEEcC-cc-cCCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG--IPAISAVMG-TK-RLQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg--l~~~~~v~d-ae-~LPfpd~SFDlV~S 537 (870)
.+.+|||||||+|.++..+++. +|+++|+++.++..|+..+..- .+ .+.+.++.+ .. .++...++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999999864 7999999999998887544321 11 234444443 32 24445678999998
Q ss_pred ccccccccc-----ChHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHI-----DGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~-----D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
... .+|.. ....++.++.++|||||+|++..
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 532 23221 22689999999999999999974
No 211
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.78 E-value=1.9e-08 Score=106.13 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCC----CCCceeEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQF----PRNVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPf----pd~SFDlV 535 (870)
.++.+|||+|||+|.++..|+. ..|+++|+++.++..++. .+...|+..+.++. +...++. ..+.||+|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 4678999999999999888875 379999999999987764 44556665544444 4444443 35789999
Q ss_pred Eecc-cc----cc------------cccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 536 HCAR-CR----VP------------WHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 536 ~Ss~-~a----lh------------w~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
++.. |. ++ .......+|.++.++|||||+|++++..
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 9851 10 11 1123478899999999999999998543
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.78 E-value=1.2e-08 Score=102.98 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=72.8
Q ss_pred CCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEcC-cc-cCC-CC--C--Ccee
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGI-PAISAVMG-TK-RLQ-FP--R--NVFD 533 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~d-ae-~LP-fp--d--~SFD 533 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+.. ....++ ..+.++.+ .. .++ ++ . ++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPL-WRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 4679999999999999888763 799999999999888744 344555 34444443 22 211 11 1 6899
Q ss_pred EEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 534 LVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 534 lV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+|++... ..+...++.++.++|||||+|++...
T Consensus 148 ~v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 148 VAVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9998632 34557899999999999999999743
No 213
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.77 E-value=2.2e-08 Score=108.77 Aligned_cols=102 Identities=17% Similarity=0.160 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC--CCcEEEEcC-cc-cCCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG--IPAISAVMG-TK-RLQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg--l~~~~~v~d-ae-~LPfpd~SFDlV~S 537 (870)
.+.+|||||||+|.++..+++. +|+++|+++.++..|+..+... .+ .+.+.++.+ .. .++..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4689999999999999998864 7999999999988777443220 11 233444443 32 23334678999998
Q ss_pred ccccccccc--Ch--HHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHI--DG--GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~--D~--~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. ..++.. .. ..++.++.++|||||+|++..
T Consensus 196 d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 196 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 63 233322 11 689999999999999999974
No 214
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.77 E-value=2e-08 Score=106.97 Aligned_cols=102 Identities=16% Similarity=0.163 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHc---CCCcEEEEc-Cccc-CCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALER---GIPAISAVM-GTKR-LQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~er---gl~~~~~v~-dae~-LPfpd~SFDlV~S 537 (870)
.+.+|||||||+|.++..+++. +|+++|+++.++..++..+.... ..+.+.++. +... ++...++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4689999999999999999864 79999999998877764332110 023344444 4322 3333678999999
Q ss_pred cccccccccC--h--HHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHID--G--GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D--~--~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. ..++... . ..++..+.++|+|||+|++..
T Consensus 158 d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 158 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 53 2343322 2 689999999999999999974
No 215
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.76 E-value=2.7e-08 Score=107.32 Aligned_cols=102 Identities=11% Similarity=0.090 Sum_probs=72.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC--CCcEEEEc-Ccc-cCCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG--IPAISAVM-GTK-RLQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg--l~~~~~v~-dae-~LPfpd~SFDlV~S 537 (870)
.+.+|||||||+|.++..|+++ +|+++|+++.++..|+..+..- .+ .+.+.++. +.. .++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4689999999999999999865 7999999999998887554331 12 23344444 432 24555788999998
Q ss_pred cccccccccC----hHHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHID----GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D----~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. ..++... ...++.++.|+|||||+|++..
T Consensus 175 d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EC-C-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 63 2333221 2468999999999999999874
No 216
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.76 E-value=1.1e-08 Score=105.57 Aligned_cols=99 Identities=12% Similarity=0.099 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-c-ccCC-C-----CCCce
Q 002884 467 YTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-T-KRLQ-F-----PRNVF 532 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-a-e~LP-f-----pd~SF 532 (870)
+..+|||||||+|..+..|+. .+|+++|+++.++..|+.. ....|+. .+.++.+ . ..++ + +.++|
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPF-IRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 467999999999998887764 3899999999999888744 4445654 3444443 3 2223 2 25789
Q ss_pred eEEEecccccccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 533 DLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 533 DlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
|+|++.. +..+...++..+.++|||||+|++...
T Consensus 149 D~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999852 345568899999999999999998743
No 217
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.76 E-value=1.6e-08 Score=113.63 Aligned_cols=106 Identities=14% Similarity=0.108 Sum_probs=77.4
Q ss_pred CCCCCEEEEECCCCchhHHHHhc----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCC--CCCCceeEEEec
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFE----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQ--FPRNVFDLVHCA 538 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LP--fpd~SFDlV~Ss 538 (870)
..++.+|||+|||+|..+..|+. ..|+++|+++.++..+.. .+...|+...+...+...++ ++++.||+|++.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~-~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD-NLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHH-HHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-HHHHcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 35678999999999998888875 379999999999988774 44455666555555555555 566789999962
Q ss_pred -----ccccccccCh----------------HHHHHHHHhhcCCCcEEEEEECC
Q 002884 539 -----RCRVPWHIDG----------------GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 539 -----~~alhw~~D~----------------~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
...++.+++. ..+|..+.++|||||+|++++..
T Consensus 323 ~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 323 APCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp CCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred CCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1112222221 37899999999999999998543
No 218
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.75 E-value=5.7e-08 Score=96.41 Aligned_cols=91 Identities=10% Similarity=0.017 Sum_probs=64.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alh 543 (870)
++.+|||+|||+|.++..|+.. .|+|+|+++.++..++.... ...+...+...+| ++||+|+++.. ++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p-~~ 121 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPP-FG 121 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCC-C-
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCC-ch
Confidence 5679999999999999988865 59999999998877664322 3344555555654 68999999864 44
Q ss_pred cccC--hHHHHHHHHhhcCCCcEEEEE
Q 002884 544 WHID--GGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 544 w~~D--~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+..+ ...++.++.++| |+++++.
T Consensus 122 ~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 122 SVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp ------CHHHHHHHHHHE--EEEEEEE
T ss_pred hccCchhHHHHHHHHHhc--CcEEEEE
Confidence 4432 257899999999 5544443
No 219
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.74 E-value=1.1e-08 Score=110.88 Aligned_cols=102 Identities=16% Similarity=0.097 Sum_probs=69.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC--CCcEEEEcC-cc-cCCCCCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG--IPAISAVMG-TK-RLQFPRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg--l~~~~~v~d-ae-~LPfpd~SFDlV~S 537 (870)
...+|||||||+|.++..|++. +|+++|+++.++..|+..+... .+ .+.+.++.+ .. .++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4679999999999999999864 7999999999888877543221 01 233444444 32 23445678999998
Q ss_pred cccccccccCh----HHHHHHHHhhcCCCcEEEEEE
Q 002884 538 ARCRVPWHIDG----GKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 538 s~~alhw~~D~----~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.. ..++.... ..++.++.++|+|||+|++..
T Consensus 188 d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC-C-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 64 23332221 588999999999999999974
No 220
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.74 E-value=8.9e-08 Score=105.54 Aligned_cols=99 Identities=10% Similarity=-0.074 Sum_probs=73.0
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-ccc-CCC-CCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKR-LQF-PRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~-LPf-pd~SFDlV~Ss~ 539 (870)
++.+||||| |+|.++..|+.. .|+++|+++.|+..|+. .+...|+..+.++.+ ... +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~-~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEK-AANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHH-HHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 468999999 999998887642 79999999999988874 444556644444444 444 664 457899999974
Q ss_pred cccccccChHHHHHHHHhhcCCCc-EEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVLRPGG-YFVWSA 569 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVLKPGG-~Lv~S~ 569 (870)
. ++.. ....+|.++.++||||| +++++.
T Consensus 250 p-~~~~-~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 250 P-ETLE-AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp C-SSHH-HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred C-CchH-HHHHHHHHHHHHcccCCeEEEEEE
Confidence 2 3222 25789999999999999 446653
No 221
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.73 E-value=1.6e-08 Score=110.18 Aligned_cols=134 Identities=15% Similarity=0.104 Sum_probs=84.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~a 541 (870)
...+|||||||+|.++..|+++ .++++|+ +.++..+. + .+.+.++.+ ... |++ .||+|+++.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~--~~~v~~~~~d~~~-~~~--~~D~v~~~~v- 260 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT-----G--NENLNFVGGDMFK-SIP--SADAVLLKWV- 260 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC-----C--CSSEEEEECCTTT-CCC--CCSEEEEESC-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc-----c--CCCcEEEeCccCC-CCC--CceEEEEccc-
Confidence 4579999999999999888764 6889999 66654332 1 233444444 334 666 3999999865
Q ss_pred cccccChH--HHHHHHHhhcCC---CcEEEEEECCCcCc--h---hHHHHHHHhhc--ccccccchhHHHHHHHHHhhcc
Q 002884 542 VPWHIDGG--KLLLELNRVLRP---GGYFVWSATPVYQK--L---GEDVEIWNAMS--NLTVSMCWELVTIKMDKLNSAG 609 (870)
Q Consensus 542 lhw~~D~~--~vL~Ei~RVLKP---GG~Lv~S~~p~~~t--L---~El~~~w~~~~--~la~~mcW~~va~~~~~L~daG 609 (870)
+|+..+.. .+|++++|+||| ||+|++........ . .... .+..+. .......+ ...+....+.++|
T Consensus 261 lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~-~~~d~~~~~~~~g~~~-t~~e~~~ll~~aG 338 (358)
T 1zg3_A 261 LHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQ-LDYDLVMLTMFLGKER-TKQEWEKLIYDAG 338 (358)
T ss_dssp GGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHH-HHHHHHHHHHHSCCCE-EHHHHHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHH-HhhCHHHhccCCCCCC-CHHHHHHHHHHcC
Confidence 66556655 999999999999 99999875432221 1 1111 111110 01111112 2335667788899
Q ss_pred ceEEE
Q 002884 610 FAIYR 614 (870)
Q Consensus 610 faI~r 614 (870)
|.+.+
T Consensus 339 f~~~~ 343 (358)
T 1zg3_A 339 FSSYK 343 (358)
T ss_dssp CCEEE
T ss_pred CCeeE
Confidence 98766
No 222
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.73 E-value=2.9e-08 Score=110.93 Aligned_cols=104 Identities=17% Similarity=0.007 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCccc-CCCCCCceeEEEecccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKR-LQFPRNVFDLVHCARCRVP 543 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~-LPfpd~SFDlV~Ss~~alh 543 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..++.+ +...++...+...+... ++...+.||+|++..-.+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n-~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQA-ALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHH-HHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 4789999999999999988864 699999999999988854 44456654444545432 2222334999999643222
Q ss_pred cc--------cChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 544 WH--------IDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 544 w~--------~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
.. .+...++..+.++|||||+|++++..
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 11 12357889999999999999977443
No 223
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.73 E-value=2.5e-08 Score=110.16 Aligned_cols=100 Identities=19% Similarity=0.074 Sum_probs=72.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCC--CcEEEEcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGI--PAISAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl--~~~~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||+|||+|.++..++.. .|+|+|+++.|+..|+. .+...|+ ...+...+...+|+++++||+|+|+.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~-n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEM-NALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHH-HHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH-HHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 45789999999999999888763 79999999999998884 4555666 34455666788888889999999974
Q ss_pred cccccc-------cCh-HHHHHHHHhhcCCCcEEEEE
Q 002884 540 CRVPWH-------IDG-GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 540 ~alhw~-------~D~-~~vL~Ei~RVLKPGG~Lv~S 568 (870)
- +... .+. ..++.++.|+| +|+.++++
T Consensus 295 P-yg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 295 P-YGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp C-CC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred C-CCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 2 1111 111 56888999999 44444443
No 224
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.73 E-value=5.1e-08 Score=106.69 Aligned_cols=143 Identities=19% Similarity=0.168 Sum_probs=88.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCc-ccCCCCCCceeEEEecccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGT-KRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~da-e~LPfpd~SFDlV~Ss~~a 541 (870)
...+|||||||+|.++..|+++ +++..|+ |.++..|.... ...+.+.+.++.++ ...|++ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~-~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHF-SFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHS-CC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhh-hhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 4679999999999999988875 6777787 66666655322 22334556666554 334444 47999998764
Q ss_pred cccccCh-HHHHHHHHhhcCCCcEEEEEECCCcCc--hhHHHHHHH-hhcccccccchhHHHHHHHHHhhccceEEE
Q 002884 542 VPWHIDG-GKLLLELNRVLRPGGYFVWSATPVYQK--LGEDVEIWN-AMSNLTVSMCWELVTIKMDKLNSAGFAIYR 614 (870)
Q Consensus 542 lhw~~D~-~~vL~Ei~RVLKPGG~Lv~S~~p~~~t--L~El~~~w~-~~~~la~~mcW~~va~~~~~L~daGfaI~r 614 (870)
.+|..+. ..+|++++++|+|||.|++........ .+.....+. .|-....+... ...+....+.++||.+.+
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~er-t~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQER-TPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCC-CHHHHHHHHHHHTCEEEE
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCC-CHHHHHHHHHHCCCceEE
Confidence 4454322 678999999999999999986543321 111111111 11111111222 233566778999998876
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.72 E-value=3.5e-08 Score=104.85 Aligned_cols=100 Identities=13% Similarity=0.090 Sum_probs=71.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHc-C---------CCcEEEEcC-cc-cCCCCCCc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALER-G---------IPAISAVMG-TK-RLQFPRNV 531 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~er-g---------l~~~~~v~d-ae-~LPfpd~S 531 (870)
.+.+|||||||+|.++..++++ +|+++|+++.++..|+..+ ... + .+.+.++.+ .. .++. +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 4689999999999999998865 7999999999988887544 110 1 233444443 32 2333 578
Q ss_pred eeEEEeccccccccc--C--hHHHHHHHHhhcCCCcEEEEEE
Q 002884 532 FDLVHCARCRVPWHI--D--GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 532 FDlV~Ss~~alhw~~--D--~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
||+|++... .++.. . ...++.++.++|+|||+|++..
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999998642 33322 1 2678999999999999999873
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.72 E-value=5.5e-08 Score=107.99 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=74.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEcC-ccc-CCC---CCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVMG-TKR-LQF---PRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~d-ae~-LPf---pd~SFDlV~ 536 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..|+. .+...++. .+.++.+ ... ++. ...+||+|+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~-N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLA-HFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHH-HHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 4679999999999999998873 79999999999998884 45555664 4545544 322 331 245899999
Q ss_pred eccccc----ccccC----hHHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 CARCRV----PWHID----GGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 Ss~~al----hw~~D----~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+..-.+ ....+ ...++..+.++|+|||+|+++..+
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 853222 12222 245778889999999999998543
No 227
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.71 E-value=2.1e-08 Score=114.43 Aligned_cols=105 Identities=20% Similarity=0.172 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCC-CCCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQ-FPRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LP-fpd~SFDlV~Ss 538 (870)
.++.+|||+|||+|..+..|+.. .|+++|+++.++..+.. .+...|+. +.++. +...++ +..++||+|++.
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~-n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLE-NVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHH-HHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 46789999999999988888742 79999999999988774 45556776 44443 444444 346789999952
Q ss_pred -----ccccccccCh----------------HHHHHHHHhhcCCCcEEEEEECCC
Q 002884 539 -----RCRVPWHIDG----------------GKLLLELNRVLRPGGYFVWSATPV 572 (870)
Q Consensus 539 -----~~alhw~~D~----------------~~vL~Ei~RVLKPGG~Lv~S~~p~ 572 (870)
...+...++. ..+|.++.++|||||+|++++...
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 1112111111 578999999999999999985443
No 228
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.71 E-value=2.1e-08 Score=106.82 Aligned_cols=97 Identities=22% Similarity=0.270 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC-CcEEE-EcCcccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI-PAISA-VMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~-v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|++. .|+|+|+++.|+..+.... ...+. +...+ ..+...++++ +||+|+++. .
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nl-p 102 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRV-QGTPVASKLQVLVGDVLKTDLP--FFDTCVANL-P 102 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHH-TTSTTGGGEEEEESCTTTSCCC--CCSEEEEEC-C
T ss_pred CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHH-HhcCCCCceEEEEcceecccch--hhcEEEEec-C
Confidence 45789999999999999999864 8999999999988776433 22233 33444 4455666665 699999974 3
Q ss_pred cccccCh-HHHH--------------HHH--HhhcCCCcEEE
Q 002884 542 VPWHIDG-GKLL--------------LEL--NRVLRPGGYFV 566 (870)
Q Consensus 542 lhw~~D~-~~vL--------------~Ei--~RVLKPGG~Lv 566 (870)
++|..+. ..+| +|+ +++|+|||.++
T Consensus 103 y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 103 YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 5554332 2222 233 37999999874
No 229
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.68 E-value=2e-07 Score=92.70 Aligned_cols=96 Identities=10% Similarity=-0.021 Sum_probs=68.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~al 542 (870)
.++.+|||+|||+|.++..|+.. .|+|+|+++.++..++.. +...++...+...+...+| ++||+|+++.. +
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~ 122 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN-LGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-F 122 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-TGGGTTSEEEEESCGGGCC---CCCSEEEECCC-C
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH-HHHcCCCEEEEECchHHcC---CCCCEEEEcCC-C
Confidence 35789999999999999988765 599999999998887743 3344543344444555554 48999999854 3
Q ss_pred cccc--ChHHHHHHHHhhcCCCcEEEEE
Q 002884 543 PWHI--DGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 543 hw~~--D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
++.. ....++.++.++| ||.+++.
T Consensus 123 ~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 123 GSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred ccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 3322 2367899999999 6655443
No 230
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.67 E-value=1e-06 Score=97.64 Aligned_cols=128 Identities=13% Similarity=0.090 Sum_probs=74.5
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHH----HhhCccc---eeccccccccCCC-Cccchhhhhc
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPII----YERGLFG---IYHDWCESFSTYP-RSYDLLHADH 791 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i----~eRGlig---~~h~wce~f~tyP-rtyDllHa~~ 791 (870)
..|||+|||+|.|+.+|... +. .|+-+|.. ..+..+ ...|+-. +--.+...+..+| .+||+|.++.
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 56999999999999999876 22 23334433 333332 3345432 2011222233455 7999999988
Q ss_pred cccccc--CCcChhhHHHhhhhcccCCcEEEEecC--hhhHHHHHHHHHcCCceEEEeecCCCceEEEEE
Q 002884 792 LFSQLK--NRCKLVPVMAEVDRIVRPGGKLIVRDE--PSAVTEVENFLKSLHWEILFAFSKDQEGVLSAQ 857 (870)
Q Consensus 792 lfS~~~--~rc~~~~vl~EmDRILRPgG~~iird~--~~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~ 857 (870)
.|.... .+-....+|.++-|+|||||.+||..+ ..+...++.++. .+.......+-+|+-+.
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg----~~~~~a~~~~F~V~~~~ 366 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG----NCTTIATNNKFVVLKAV 366 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS----CCEEEEECSSEEEEEEE
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC----CEEEEeeCCCEEEEEEc
Confidence 875421 122334689999999999999999643 334455555544 34443344455555544
No 231
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.66 E-value=7.3e-08 Score=101.88 Aligned_cols=94 Identities=16% Similarity=0.087 Sum_probs=68.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHH---HcCCCcEEEEcC-cccCCCCCCceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFAL---ERGIPAISAVMG-TKRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~---ergl~~~~~v~d-ae~LPfpd~SFDlV~Ss~~ 540 (870)
.+.+|||||||+|.++..+++. +|+++|+++.++..|+..+.. ....+.+.++.+ ..... ++||+|++..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4679999999999999888764 799999999988776533211 111233444443 33333 7899999862
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
.++..++..+.|+|||||+|++..
T Consensus 148 -----~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 148 -----EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp -----CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred -----CChHHHHHHHHHhcCCCcEEEEEc
Confidence 345569999999999999999863
No 232
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.66 E-value=2.2e-08 Score=99.63 Aligned_cols=131 Identities=16% Similarity=0.228 Sum_probs=98.0
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccc---cCCC-Cccchhhhhcccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESF---STYP-RSYDLLHADHLFSQL 796 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f---~tyP-rtyDllHa~~lfS~~ 796 (870)
-..|||+|||.|.++.+|...+. +|+-+|.. ..+..+.+++.+.+++.-.+.+ +..+ .+||+|.+.++|.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 36799999999999999999865 55666655 7888888887776666433444 3334 5699999988777
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecCh--------------------------------hhHHHHHHHHHcCCceEEE
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~--------------------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
..++..+|.++-|+|||||++||.+.. .....+..++..-.+++..
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 246778999999999999999998531 1468899999999999875
Q ss_pred eec-C------CCceEEEEEeC
Q 002884 845 AFS-K------DQEGVLSAQKG 859 (870)
Q Consensus 845 ~~~-~------~~e~iL~~~K~ 859 (870)
... . ....+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 421 1 12457778774
No 233
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.64 E-value=8.8e-08 Score=109.69 Aligned_cols=105 Identities=19% Similarity=0.233 Sum_probs=75.0
Q ss_pred CCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCC-CCCceeEEEec-
Q 002884 467 YTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQF-PRNVFDLVHCA- 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPf-pd~SFDlV~Ss- 538 (870)
++.+|||+|||+|..+..|+. ..|+++|+++.++..+.. .+...|+.++.++. +...++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~-n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHA-NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH-HHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 678999999999998888775 279999999999988774 44455666554444 4455543 45789999972
Q ss_pred cc----ccccccC----------------hHHHHHHHHhhcCCCcEEEEEECCC
Q 002884 539 RC----RVPWHID----------------GGKLLLELNRVLRPGGYFVWSATPV 572 (870)
Q Consensus 539 ~~----alhw~~D----------------~~~vL~Ei~RVLKPGG~Lv~S~~p~ 572 (870)
.| .+...++ ...+|.++.++|||||+|++++...
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 11 1211111 1368999999999999999986433
No 234
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.62 E-value=5.2e-08 Score=107.74 Aligned_cols=104 Identities=17% Similarity=0.109 Sum_probs=75.2
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccC-CC---CCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRL-QF---PRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~L-Pf---pd~SFDlV~Ss~ 539 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..|+. .+...++..+.++.+ ...+ +. ...+||+|++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~-n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEE-NARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHH-HHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4679999999999999888864 89999999999988874 445556654444444 3322 21 257899999963
Q ss_pred cccccc--------cChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 540 CRVPWH--------IDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 540 ~alhw~--------~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
-.+... .....++.++.++|+|||+|+++...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 221111 22357899999999999999998543
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.62 E-value=1.7e-07 Score=104.06 Aligned_cols=104 Identities=11% Similarity=0.035 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCC-C-cEEEEcC-cccC-C-C--CCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGI-P-AISAVMG-TKRL-Q-F--PRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl-~-~~~~v~d-ae~L-P-f--pd~SFDlV~ 536 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..|+. .+...++ . .+.++.+ ...+ + + ....||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~-n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQ-NVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4689999999999999998864 79999999999988874 4455566 4 4444444 3322 2 1 146899999
Q ss_pred ecccccc--------cccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 CARCRVP--------WHIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 Ss~~alh--------w~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+..-.+. .......++.++.++|+|||+|+++..+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9632111 1133468899999999999999998544
No 236
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.61 E-value=2.7e-08 Score=102.77 Aligned_cols=133 Identities=17% Similarity=0.190 Sum_probs=97.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc-cceeccccccccCCCCccchhhhhc-ccccccCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL-FGIYHDWCESFSTYPRSYDLLHADH-LFSQLKNR 799 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl-ig~~h~wce~f~tyPrtyDllHa~~-lfS~~~~r 799 (870)
..|||+|||.|.++..|...+. +|+-+|.. ..+..+.++.- +-+++.-.+.++. +.+||+|.+.+ +|......
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 5799999999999999999864 55666654 67777777631 2333322233333 79999999987 88776544
Q ss_pred cChhhHHHhhhhcccCCcEEEEecC-------------------------------------------------------
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDE------------------------------------------------------- 824 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~------------------------------------------------------- 824 (870)
-.+..+|-++-|+|||||+|||.+.
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHE 207 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEE
Confidence 4566789999999999999999520
Q ss_pred ------hhhHHHHHHHHHcCCceEEEeec-CCCceEEEEEeC
Q 002884 825 ------PSAVTEVENFLKSLHWEILFAFS-KDQEGVLSAQKG 859 (870)
Q Consensus 825 ------~~~~~~~~~~~~~l~W~~~~~~~-~~~e~iL~~~K~ 859 (870)
......++.+++.-.+++..... .....+++++|+
T Consensus 208 ~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 249 (263)
T 3pfg_A 208 ESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred EEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecC
Confidence 01268899999999998876533 345679999996
No 237
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.60 E-value=2.7e-07 Score=100.45 Aligned_cols=93 Identities=12% Similarity=0.113 Sum_probs=70.7
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCC-CcEEEEc-CcccCCCCCCceeEEEeccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGI-PAISAVM-GTKRLQFPRNVFDLVHCARCRV 542 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl-~~~~~v~-dae~LPfpd~SFDlV~Ss~~al 542 (870)
++.+|||+|||+|.++.. +.. .|+++|+++.++..++. .+...++ ....++. +...+. +.||+|++..-
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~-n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP-- 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKK-NIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP-- 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT--
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc--
Confidence 578999999999999988 754 89999999999988874 4445565 3444444 444444 78999999631
Q ss_pred ccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 543 PWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 543 hw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
. ....++..+.++|+|||+|++..
T Consensus 268 ~---~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 268 K---FAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp T---TGGGGHHHHHHHEEEEEEEEEEE
T ss_pred H---hHHHHHHHHHHHcCCCCEEEEEE
Confidence 1 12378999999999999999873
No 238
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.60 E-value=1.2e-07 Score=99.86 Aligned_cols=100 Identities=17% Similarity=0.071 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc-CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
.++.+|||||||+|.++..+.. ..++++||++.|+..+.. ++...+.+..+.+.+....|++. +||+|++.- ++|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~-~~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk-~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITP-FAREKDWDFTFALQDVLCAPPAE-AGDLALIFK-LLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHH-HHHHTTCEEEEEECCTTTSCCCC-BCSEEEEES-CHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeecccCCCCC-CcchHHHHH-HHHH
Confidence 4578999999999999988764 499999999999988874 45556766666777766666554 899999874 3665
Q ss_pred ccCh-HHHHHHHHhhcCCCcEEEEE
Q 002884 545 HIDG-GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 545 ~~D~-~~vL~Ei~RVLKPGG~Lv~S 568 (870)
.++. ...+..+...|+++|+|+-.
T Consensus 181 LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 181 LEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred hhhhchhhHHHHHHHhcCCCEEEEc
Confidence 5433 33444899999999988865
No 239
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.60 E-value=8.1e-08 Score=106.48 Aligned_cols=104 Identities=15% Similarity=0.066 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-cccC-CC---CCCceeEEEe
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKRL-QF---PRNVFDLVHC 537 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~L-Pf---pd~SFDlV~S 537 (870)
++.+|||+|||+|.++..++.. .|+++|+++.++..|+. .+...++. .+.++.+ ...+ +. ..+.||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~-n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKE-NAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5789999999999999998864 79999999999988874 44555664 4444444 3332 21 2568999999
Q ss_pred ccccccc--------ccChHHHHHHHHhhcCCCcEEEEEECC
Q 002884 538 ARCRVPW--------HIDGGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 538 s~~alhw--------~~D~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
..-.+.. ..+...++.++.++|+|||+|+++...
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 6321111 123467899999999999999988543
No 240
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.59 E-value=1.4e-07 Score=98.07 Aligned_cols=98 Identities=16% Similarity=0.070 Sum_probs=72.3
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCcccCCCCCC-ceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGTKRLQFPRN-VFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~dae~LPfpd~-SFDlV~Ss~~ 540 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...|+. .+.+..++.--+++.+ .||+|+.+.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG- 92 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVK-NVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG- 92 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC-
Confidence 4679999999999999988874 69999999999998874 55566765 3555554422234433 699988653
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+.- .-...+|.++...|+|+|+|+++
T Consensus 93 -~Gg-~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 93 -MGG-RLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp -ECH-HHHHHHHHHTGGGCTTCCEEEEE
T ss_pred -CCh-HHHHHHHHHHHHHhCCCCEEEEE
Confidence 211 11367888999999999999998
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.58 E-value=1.3e-07 Score=112.91 Aligned_cols=103 Identities=18% Similarity=0.102 Sum_probs=75.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCC--cEEEEc-Ccc-cCCCCCCceeEEEecc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIP--AISAVM-GTK-RLQFPRNVFDLVHCAR 539 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~v~-dae-~LPfpd~SFDlV~Ss~ 539 (870)
++.+|||+|||+|.++..++.. .|+++|+|+.++..++.+ +...++. .+.++. +.. .++...++||+|++..
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N-~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERN-LRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 4779999999999999888754 599999999999998854 4445654 344444 433 3455568899999964
Q ss_pred ccc----------ccccChHHHHHHHHhhcCCCcEEEEEEC
Q 002884 540 CRV----------PWHIDGGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 540 ~al----------hw~~D~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
-.+ ....+...++..+.++|+|||+|+++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 221 1112346789999999999999999853
No 242
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.58 E-value=4.4e-07 Score=102.16 Aligned_cols=97 Identities=19% Similarity=0.157 Sum_probs=71.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-ccc----CCCCCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKR----LQFPRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~----LPfpd~SFDlV~Ss 538 (870)
.++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+. .+...++.++.++.+ ... +|+++++||+|+++
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 35679999999999999999875 89999999999998874 455567665555544 333 45667889999997
Q ss_pred ccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 539 RCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 539 ~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
. +... ...++..+. .++|+++++++
T Consensus 364 P---Pr~g-~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 364 P---ARAG-AAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp C---CTTC-CHHHHHHHH-HHCCSEEEEEE
T ss_pred C---CCcc-HHHHHHHHH-hcCCCeEEEEE
Confidence 4 2221 234555544 48999999998
No 243
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.58 E-value=2.4e-07 Score=100.72 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=72.8
Q ss_pred CCCCEEEEECCCCchhHHHHhc---------CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE---------RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~---------r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~ 536 (870)
.++.+|||+|||+|.++..+++ ..++|+|+++.++..|+.... ..|+...+...+... +.+...||+|+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~-~~~~~~fD~Ii 206 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLA-NLLVDPVDVVI 206 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTS-CCCCCCEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCC-ccccCCccEEE
Confidence 3567999999999998876653 368999999999888875444 345544444444332 44567899999
Q ss_pred ecccccccccCh------------------HHHHHHHHhhcCCCcEEEEEEC
Q 002884 537 CARCRVPWHIDG------------------GKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 537 Ss~~alhw~~D~------------------~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
++.- +++.... ..++..+.+.|+|||++++..+
T Consensus 207 ~NPP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 207 SDLP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EECC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 9853 2222111 2579999999999999998853
No 244
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.57 E-value=3.3e-08 Score=97.78 Aligned_cols=130 Identities=15% Similarity=0.164 Sum_probs=89.9
Q ss_pred ccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCCC-Cccchhhhhcccc
Q 002884 724 NVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 724 nvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
.|||+|||.|.++.+|.+.+- .+|+-+|.. ..+..+.++ |+ +-+++.-.+.++ +| .+||+|.+.++|.
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-IEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-SCTTCEEEEEEESCGG
T ss_pred EEEEECCCCCHHHHHHHHcCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-CCcccccEEEECchHh
Confidence 799999999999999988732 355556654 566666655 54 334443333333 44 8999999988887
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh------------------------------hhHHHHHHHHHcCCceEEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
+.. +...+|-++-|+|||||.++|.+.. .....++.+++...++...
T Consensus 123 ~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 123 FWE---DVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp GCS---CHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred hcc---CHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 763 4677999999999999999997521 1236778888888887654
Q ss_pred eecCCCceEEEEEeC
Q 002884 845 AFSKDQEGVLSAQKG 859 (870)
Q Consensus 845 ~~~~~~e~iL~~~K~ 859 (870)
.........+++.|+
T Consensus 200 ~~~~~~~~~~~~~k~ 214 (219)
T 3dlc_A 200 IILGDEGFWIIISKT 214 (219)
T ss_dssp EEEETTEEEEEEBCC
T ss_pred EEecCCceEEEEecc
Confidence 433344445555553
No 245
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.57 E-value=9e-08 Score=95.68 Aligned_cols=133 Identities=19% Similarity=0.247 Sum_probs=94.8
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc--cceeccccccccCCCCccchhhhhcccccccC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL--FGIYHDWCESFSTYPRSYDLLHADHLFSQLKN 798 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl--ig~~h~wce~f~tyPrtyDllHa~~lfS~~~~ 798 (870)
-..|||+|||.|.++.+|...+. +|+-+|.. ..+..+.++-- +-+++.-.+.+ +++.+||+|.+.++|.....
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~ 121 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF-EVPTSIDTIVSTYAFHHLTD 121 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC-CCCSCCSEEEEESCGGGSCH
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc-CCCCCeEEEEECcchhcCCh
Confidence 45799999999999999998864 56666654 67777766632 33444222232 33489999999888876543
Q ss_pred CcChhhHHHhhhhcccCCcEEEEecCh----h---------------------------hHHHHHHHHHcCCceEEEeec
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRDEP----S---------------------------AVTEVENFLKSLHWEILFAFS 847 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird~~----~---------------------------~~~~~~~~~~~l~W~~~~~~~ 847 (870)
. ....+|.++-|+|||||+++|.+.. . ....++.+++...+++.....
T Consensus 122 ~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 122 D-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp H-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred H-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 1 1123899999999999999998632 0 236788899999998876655
Q ss_pred CCCceEEEEEeC
Q 002884 848 KDQEGVLSAQKG 859 (870)
Q Consensus 848 ~~~e~iL~~~K~ 859 (870)
.+-.-++.++|+
T Consensus 201 ~~~~w~~~~~~~ 212 (220)
T 3hnr_A 201 NHFVWVMEATKQ 212 (220)
T ss_dssp SSSEEEEEEEEC
T ss_pred cceEEEEeehhh
Confidence 556667888774
No 246
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.56 E-value=3.9e-07 Score=102.82 Aligned_cols=95 Identities=22% Similarity=0.142 Sum_probs=68.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEeccccccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCRVPW 544 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~alhw 544 (870)
++.+|||+|||+|.++..|+.. .|+|+|+++.++..|+. .+...++...+...+...++. . .||+|++..- .
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~-n~~~ngl~v~~~~~d~~~~~~-~-~fD~Vv~dPP---r 363 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR-NVEINNVDAEFEVASDREVSV-K-GFDTVIVDPP---R 363 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHHTCCEEEEECCTTTCCC-T-TCSEEEECCC---T
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChHHcCc-c-CCCEEEEcCC---c
Confidence 4679999999999999999875 89999999999998874 444556663333344454432 2 8999999642 2
Q ss_pred ccChHHHHHHHHhhcCCCcEEEEE
Q 002884 545 HIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 545 ~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
..-...++..+ +.|+|||+++++
T Consensus 364 ~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 364 AGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp TCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred cchHHHHHHHH-HhcCCCcEEEEE
Confidence 11123455555 469999999998
No 247
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.56 E-value=6.8e-08 Score=95.56 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=95.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc-cceeccccccccCCCCccchhhhhcccccccCCc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL-FGIYHDWCESFSTYPRSYDLLHADHLFSQLKNRC 800 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl-ig~~h~wce~f~tyPrtyDllHa~~lfS~~~~rc 800 (870)
..|||+|||.|.++..|...+. .|+-+|.. ..+..+.++.- +.+++.-.+.++.-+.+||+|.+.++|.+.. +-
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~~ 118 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMG-PG 118 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCC-TT
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCC-HH
Confidence 5699999999999999998865 55566654 67777777731 3333332233433348999999988887654 23
Q ss_pred ChhhHHHhhhhcccCCcEEEEecCh----------------hhHHHHHHHHHcCCceEEEee--cCCCceEEEEEe
Q 002884 801 KLVPVMAEVDRIVRPGGKLIVRDEP----------------SAVTEVENFLKSLHWEILFAF--SKDQEGVLSAQK 858 (870)
Q Consensus 801 ~~~~vl~EmDRILRPgG~~iird~~----------------~~~~~~~~~~~~l~W~~~~~~--~~~~e~iL~~~K 858 (870)
.+..+|.++-|+|||||+++|.+.. .....++.++....|++.... ...+...|+..|
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~ 194 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEA 194 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhh
Confidence 5678999999999999999998632 236889999999999987552 224555665555
No 248
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.55 E-value=4.6e-08 Score=98.56 Aligned_cols=94 Identities=18% Similarity=0.361 Sum_probs=70.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC--ccceeccccccccCCCCccchhhhhcccccccCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG--LFGIYHDWCESFSTYPRSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG--lig~~h~wce~f~tyPrtyDllHa~~lfS~~~~r 799 (870)
..|||+|||.|.++..|.+.+. +|+-+|.. ..+..+.++- -+-+++.-.+.+ ..+.+||+|++.++|.+..
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS--
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc--
Confidence 3599999999999999998754 45555654 6677776663 233444333343 3458999999999888765
Q ss_pred cChhhHHHhhh-hcccCCcEEEEec
Q 002884 800 CKLVPVMAEVD-RIVRPGGKLIVRD 823 (870)
Q Consensus 800 c~~~~vl~EmD-RILRPgG~~iird 823 (870)
+...+|.|+- |+|||||+++|.+
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 3578999999 9999999999986
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.54 E-value=2.5e-07 Score=99.26 Aligned_cols=71 Identities=20% Similarity=0.382 Sum_probs=52.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+.+ .|+|+|+++.++..++... ...+.+.+.++. +...++++ +||+|+++.
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~-~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~ 114 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRC-LYEGYNNLEVYEGDAIKTVFP--KFDVCTANI 114 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHH-HHTTCCCEEC----CCSSCCC--CCSEEEEEC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEECchhhCCcc--cCCEEEEcC
Confidence 45789999999999999999875 8999999999998887543 334554444444 44566654 799999974
No 250
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.54 E-value=8.1e-08 Score=92.35 Aligned_cols=132 Identities=14% Similarity=0.189 Sum_probs=94.5
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccccCCC-CccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESFSTYP-RSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f~tyP-rtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++.+|.+..- +|+-+|.. ..+..+.++ ..-+.-.+.. .++| .+||+|.+.++|....
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~--~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~-- 89 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEK--FDSVITLSDP-KEIPDNSVDFILFANSFHDMD-- 89 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHH--CTTSEEESSG-GGSCTTCEEEEEEESCSTTCS--
T ss_pred CCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHh--CCCcEEEeCC-CCCCCCceEEEEEccchhccc--
Confidence 35799999999999999998862 77777765 777777777 1112212222 4555 7999999988887664
Q ss_pred cChhhHHHhhhhcccCCcEEEEecCh-------------hhHHHHHHHHHcCCceEEEe-ecCCCceEEEEEeCCCCCC
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDEP-------------SAVTEVENFLKSLHWEILFA-FSKDQEGVLSAQKGNWQPD 864 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~~-------------~~~~~~~~~~~~l~W~~~~~-~~~~~e~iL~~~K~~w~~~ 864 (870)
+...+|.++-|+|||||++++.+.. .....++.++. .|++... .......+|++.|+-=++.
T Consensus 90 -~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~~~~~~ 165 (170)
T 3i9f_A 90 -DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRKTSEGH 165 (170)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEECCCCSC
T ss_pred -CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecCCCCcc
Confidence 4678999999999999999998532 12567888887 8887544 3334567888887644443
No 251
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.53 E-value=2.6e-07 Score=96.43 Aligned_cols=99 Identities=14% Similarity=0.009 Sum_probs=72.5
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcCc-ccCCCCCCceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMGT-KRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~da-e~LPfpd~SFDlV~Ss~~ 540 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...|+. .+.+..++ .....+.+.||+|+...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~-N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG- 98 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALK-NVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG- 98 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE-
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECchhhccccccccCEEEEeC-
Confidence 4689999999999999998874 69999999999999885 44555654 34555443 33333444799987542
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+.- .-...+|.+..+.|+++|+|+++.
T Consensus 99 -mGg-~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 99 -MGG-RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp -ECH-HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred -Cch-HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 211 113678888899999999999983
No 252
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.53 E-value=2.4e-07 Score=97.51 Aligned_cols=98 Identities=13% Similarity=0.030 Sum_probs=71.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCc-EEEEcCc-ccCCCCCCceeEEEeccc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPA-ISAVMGT-KRLQFPRNVFDLVHCARC 540 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~-~~~v~da-e~LPfpd~SFDlV~Ss~~ 540 (870)
++.+|||||||+|.++..|+.. .|+++|+++.++..|+. .+...|+.. +.+..++ .....+...||+|++..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag- 98 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQK-QVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG- 98 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE-
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEecchhhccCccccccEEEEeC-
Confidence 4689999999999999998874 69999999999999884 455566643 4455443 33333334699988643
Q ss_pred ccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 541 RVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 541 alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+.- .-...+|.+..+.|+++|+|+++
T Consensus 99 -mGg-~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 99 -MGG-TLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp -ECH-HHHHHHHHHTGGGGTTCCEEEEE
T ss_pred -Cch-HHHHHHHHHHHHHhCCCCEEEEE
Confidence 110 11367888899999999999998
No 253
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.53 E-value=4.2e-08 Score=95.99 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=81.1
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc--cceec-cccccccCCCCccchhhhhccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
-..|||+|||.|.++..|...+. +|+-+|.. ..+..+.+ .|+ +-+++ |+. .++. +.+||+|.+.++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCCceEEEEcchh
Confidence 35799999999999999988864 45555543 45555443 344 33333 333 3333 7899999998888
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh--------------hhHHHHHHHHHcCCceEEEe
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~--------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
..... -.+..+|.++-|+|||||+++|.+.. .....++.++.. |++...
T Consensus 108 ~~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~ 170 (199)
T 2xvm_A 108 MFLEA-KTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKY 170 (199)
T ss_dssp GGSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hhCCH-HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEe
Confidence 76542 24667999999999999998876421 135778888887 887654
No 254
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.52 E-value=1.5e-07 Score=107.29 Aligned_cols=105 Identities=16% Similarity=0.191 Sum_probs=74.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccCC-CCCCceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRLQ-FPRNVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~LP-fpd~SFDlV~Ss 538 (870)
.++.+|||+|||+|..+..|+.. .|+++|+++.++..++. .+...|+.++.++.+ ...++ +.+++||+|++.
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~-n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSE-NIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-HHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 46789999999999888777652 79999999999888774 455567766555544 34443 335789999973
Q ss_pred c-c----ccc--------cccCh--------HHHHHHHHhhcCCCcEEEEEECC
Q 002884 539 R-C----RVP--------WHIDG--------GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 539 ~-~----alh--------w~~D~--------~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
. | .+. |..+. ..+|.++.++|||||+|++++..
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 1 1 111 11111 26799999999999999998543
No 255
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.50 E-value=3.6e-07 Score=97.83 Aligned_cols=116 Identities=9% Similarity=0.063 Sum_probs=80.3
Q ss_pred CCccccccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCc-
Q 002884 440 GGTQFIHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPA- 515 (870)
Q Consensus 440 ggt~F~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~- 515 (870)
...+|..+-..-...+...+ .++.+|||+|||+|.|+..++.+ .|+++|++|..+..++. .+...++..
T Consensus 104 ~k~~f~~~~~~er~ri~~~~------~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~-N~~~N~v~~~ 176 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKVA------KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVE-NIHLNKVEDR 176 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHHC------CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHH-HHHHTTCTTT
T ss_pred cceEEcCCcHHHHHHHHHhc------CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHH-HHHHcCCCCc
Confidence 34455555543344455443 35889999999999998877643 79999999998887774 455566653
Q ss_pred EEEEc-CcccCCCCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 516 ISAVM-GTKRLQFPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 516 ~~~v~-dae~LPfpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+..+. |...++ +.+.||.|+++. + .....+|..+.++|||||++.+-
T Consensus 177 v~~~~~D~~~~~-~~~~~D~Vi~~~---p--~~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 177 MSAYNMDNRDFP-GENIADRILMGY---V--VRTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EEEECSCTTTCC-CCSCEEEEEECC---C--SSGGGGHHHHHHHEEEEEEEEEE
T ss_pred EEEEeCcHHHhc-cccCCCEEEECC---C--CcHHHHHHHHHHHcCCCCEEEEE
Confidence 44444 344444 357899999863 2 22346788889999999998764
No 256
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.50 E-value=5.9e-08 Score=96.97 Aligned_cols=132 Identities=15% Similarity=0.120 Sum_probs=91.5
Q ss_pred ccccccccccchhHHhhhcCCC---eEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCCCCccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQ---VWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTYPRSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~---vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~tyPrtyDllHa~~ 791 (870)
-..|||+|||.|.++.+|.... . .|+-+|.. ..+..+.++ |+ +-++..-.+.++.-+.+||+|.+.+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 114 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKG---KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF 114 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh
Confidence 3569999999999999997653 2 33444443 455555444 43 3333322233332237999999998
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecC-------------hhhHHHHHHHHHcCCceEEEe-ecCCCceEEEEE
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-------------PSAVTEVENFLKSLHWEILFA-FSKDQEGVLSAQ 857 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~-------------~~~~~~~~~~~~~l~W~~~~~-~~~~~e~iL~~~ 857 (870)
+|.... +...+|-++-|+|||||+++|.+. ......+..++....|++... .......+++++
T Consensus 115 ~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~ 191 (219)
T 3dh0_A 115 TFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVYAM 191 (219)
T ss_dssp CGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEEEE
T ss_pred hhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEEEE
Confidence 887764 467899999999999999999852 123688999999999997654 334456778888
Q ss_pred eC
Q 002884 858 KG 859 (870)
Q Consensus 858 K~ 859 (870)
|+
T Consensus 192 k~ 193 (219)
T 3dh0_A 192 IV 193 (219)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 257
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.49 E-value=1.2e-07 Score=95.72 Aligned_cols=97 Identities=16% Similarity=0.195 Sum_probs=70.1
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCCCccchhhhhc-ccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYPRSYDLLHADH-LFS 794 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyPrtyDllHa~~-lfS 794 (870)
-..|||+|||.|.++..|...+. +|+-+|.. ..+..+.++ |+ +-+++.-.+.+ ++|.+||+|.+.+ +|.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NINRKFDLITCCLDSTN 113 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCSCCEEEEEECTTGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccC-CccCCceEEEEcCcccc
Confidence 35799999999999999998864 45666654 666665554 32 33333222222 2458999999987 888
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
+....-.+..+|.++-|+|||||.+|+.
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 7643345678999999999999999984
No 258
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.49 E-value=2.5e-07 Score=98.50 Aligned_cols=100 Identities=9% Similarity=-0.000 Sum_probs=75.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCCceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~SFDlV~Ss~~a 541 (870)
....+|||||||+|-++..++.. .|+++|+++.|+..+.. ++...|+...+.+.+. ....+.+.||+|+++- +
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~-~l~~~g~~~~~~v~D~-~~~~p~~~~DvaL~lk-t 207 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDE-ALTRLNVPHRTNVADL-LEDRLDEPADVTLLLK-T 207 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHH-HHHHTTCCEEEEECCT-TTSCCCSCCSEEEETT-C
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH-HHHhcCCCceEEEeee-cccCCCCCcchHHHHH-H
Confidence 34789999999999999888553 89999999999988874 4455577755555553 3344567899999975 4
Q ss_pred cccccCh-HHHHHHHHhhcCCCcEEEEE
Q 002884 542 VPWHIDG-GKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 542 lhw~~D~-~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+|+.++. ...+.++...|+|||+|+-.
T Consensus 208 i~~Le~q~kg~g~~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 208 LPCLETQQRGSGWEVIDIVNSPNIVVTF 235 (281)
T ss_dssp HHHHHHHSTTHHHHHHHHSSCSEEEEEE
T ss_pred HHHhhhhhhHHHHHHHHHhCCCCEEEec
Confidence 7765443 33344999999999999865
No 259
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.48 E-value=3e-07 Score=102.25 Aligned_cols=128 Identities=20% Similarity=0.236 Sum_probs=79.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc-cceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL-FGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl-ig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||+|.++.+|...+. .|+-+|.. ..+..+.+ .|+ +-+++.-+..+..-+.+||+|.++..|...
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 4699999999999999998864 45555543 44444333 233 334443223322213799999998887653
Q ss_pred cC--CcChhhHHHhhhhcccCCcEEEEecCh--hhHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 797 KN--RCKLVPVMAEVDRIVRPGGKLIVRDEP--SAVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 797 ~~--rc~~~~vl~EmDRILRPgG~~iird~~--~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
.. .-.+..+|.++-|+|||||.++|.-.. .+...++..+.. +... .+.+-+||-+.|
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~----v~~l-~~~gF~Vl~a~~ 372 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGA----FQTL-KVAEYKVLFAEK 372 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSC----CEEE-EESSSEEEEEEC
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhcc----EEEE-eCCCEEEEEEEE
Confidence 32 123457899999999999999997433 333445554443 3333 334556666554
No 260
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.48 E-value=3.5e-07 Score=91.43 Aligned_cols=119 Identities=16% Similarity=0.109 Sum_probs=86.2
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHHHhhCccceeccccccccCC-CCccchhhhhcccccccCCc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPIIYERGLFGIYHDWCESFSTY-PRSYDLLHADHLFSQLKNRC 800 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i~eRGlig~~h~wce~f~ty-PrtyDllHa~~lfS~~~~rc 800 (870)
-..|||+|||.|.++..|. ..|..+-+.+. -+.+++.-.+.+ ++ +.+||+|.+.++|. . -
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------------~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~-~---~ 128 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL-------------DPRVTVCDMAQV-PLEDESVDVAVFCLSLM-G---T 128 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS-------------STTEEESCTTSC-SCCTTCEEEEEEESCCC-S---S
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC-------------CceEEEeccccC-CCCCCCEeEEEEehhcc-c---c
Confidence 3579999999999999995 45555555544 122333222333 35 47999999988773 2 3
Q ss_pred ChhhHHHhhhhcccCCcEEEEecChh---hHHHHHHHHHcCCceEEEeec-CCCceEEEEEeC
Q 002884 801 KLVPVMAEVDRIVRPGGKLIVRDEPS---AVTEVENFLKSLHWEILFAFS-KDQEGVLSAQKG 859 (870)
Q Consensus 801 ~~~~vl~EmDRILRPgG~~iird~~~---~~~~~~~~~~~l~W~~~~~~~-~~~e~iL~~~K~ 859 (870)
....+|.++-|+|+|||++||.+... ....+..++....+++..... ...-.+++++|.
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKT 191 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEEC
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEec
Confidence 56789999999999999999987554 468889999999998865433 234578888885
No 261
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.48 E-value=3.6e-07 Score=101.72 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=68.5
Q ss_pred CCEEEEECCCCchhHHHHh-------------------cCCEEEEeCChhhHHHHHHHHHHH------------c--CCC
Q 002884 468 TRVSLDVGCGVASFGGYLF-------------------ERDVLTMSFAPKDEHDAQIQFALE------------R--GIP 514 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La-------------------~r~VtgVDiSp~ml~~A~vq~A~e------------r--gl~ 514 (870)
..+|+|+|||+|..+..+. +-.|..-|+..+|...-....... . +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 5789999999998776651 116788899888865544322210 0 001
Q ss_pred cEEEEcCc-ccCCCCCCceeEEEecccccccccC--------------------------------------hHHHHHHH
Q 002884 515 AISAVMGT-KRLQFPRNVFDLVHCARCRVPWHID--------------------------------------GGKLLLEL 555 (870)
Q Consensus 515 ~~~~v~da-e~LPfpd~SFDlV~Ss~~alhw~~D--------------------------------------~~~vL~Ei 555 (870)
....+.+. ..-.||+++||+|+|+. ++||..+ ...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 12223332 23458999999999996 5999863 23468888
Q ss_pred HhhcCCCcEEEEEE
Q 002884 556 NRVLRPGGYFVWSA 569 (870)
Q Consensus 556 ~RVLKPGG~Lv~S~ 569 (870)
+|.|+|||.|+++.
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999999983
No 262
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.47 E-value=1.4e-08 Score=107.12 Aligned_cols=93 Identities=18% Similarity=0.153 Sum_probs=68.7
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccccCCCCccchhhhhcccccccCCcC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESFSTYPRSYDLLHADHLFSQLKNRCK 801 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f~tyPrtyDllHa~~lfS~~~~rc~ 801 (870)
..|||+|||+|.++..|.+.+- +|+-+|-. .+|..+..+.-+-..+.-.|.++.-+.+||+|.|..+|-. .+
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~----~~ 113 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHW----FD 113 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTT----CC
T ss_pred CCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhH----hh
Confidence 4699999999999999998864 45555544 5555554444455555556665433489999999877732 35
Q ss_pred hhhHHHhhhhcccCCcEEEEe
Q 002884 802 LVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 802 ~~~vl~EmDRILRPgG~~iir 822 (870)
....|.|+.|||||||.|++-
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEE
Confidence 678999999999999999875
No 263
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.47 E-value=7.4e-08 Score=102.39 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=91.2
Q ss_pred cccccccccchhHHhhhc--CCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCCCCccchhhhhcc
Q 002884 723 RNVMDMRAVYGGFAAALK--DLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~--~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~tyPrtyDllHa~~l 792 (870)
..|||+|||.|.++.+|+ ..+- .+|+-+|.. ..+..+.++ |+ +-+++.-...+ ++|.+||+|.+.++
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-DTREGYDLLTSNGL 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-CCCSCEEEEECCSS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-CccCCeEEEEECCh
Confidence 569999999999999994 3322 244455543 555555443 44 33444322232 35699999999888
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEecCh---------------------------------------hhHHHHHH
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP---------------------------------------SAVTEVEN 833 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird~~---------------------------------------~~~~~~~~ 833 (870)
|-+....-....+|-++-|+|||||++||.+-. .....+..
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 877654434445899999999999999998711 23678889
Q ss_pred HHHcCCceEEEeecC--CCceEEEEEeC
Q 002884 834 FLKSLHWEILFAFSK--DQEGVLSAQKG 859 (870)
Q Consensus 834 ~~~~l~W~~~~~~~~--~~e~iL~~~K~ 859 (870)
+++.-.+++...... ..-..++++|+
T Consensus 277 ~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 277 QLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 999999998654322 23457888885
No 264
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.46 E-value=7.8e-08 Score=95.41 Aligned_cols=130 Identities=16% Similarity=0.217 Sum_probs=89.0
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccce--eccccccccCCCCccchhhhhcccccccCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGI--YHDWCESFSTYPRSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~--~h~wce~f~tyPrtyDllHa~~lfS~~~~r 799 (870)
..|||+|||.|.++.+|...+. +|+-+|.. ..+..+.++|+..+ ++.-.+.+ .-+.+||+|.+.++|.+...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~- 122 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPD- 122 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCH-
T ss_pred CeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCH-
Confidence 4799999999999999988754 45555644 67777777775332 22222222 22489999999888876653
Q ss_pred cChhhHHHhhhhcccCCcEEEEecCh----------------------------------hhHHHHHHHHHcCCceEEEe
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDEP----------------------------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~~----------------------------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
-.+..+|.++-|+|||||.+++.+.. .....+..+++...|++...
T Consensus 123 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~ 202 (218)
T 3ou2_A 123 DRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVD 202 (218)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEee
Confidence 22567999999999999999998531 13467888888888886654
Q ss_pred ecCCCceEEEEE
Q 002884 846 FSKDQEGVLSAQ 857 (870)
Q Consensus 846 ~~~~~e~iL~~~ 857 (870)
......-+.+++
T Consensus 203 ~~~~~~~~~~~~ 214 (218)
T 3ou2_A 203 EVHPGFLYATCR 214 (218)
T ss_dssp EEETTEEEEEEE
T ss_pred eccccceEeecC
Confidence 333333333333
No 265
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.46 E-value=2e-07 Score=93.38 Aligned_cols=135 Identities=12% Similarity=0.148 Sum_probs=90.7
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----C-------ccceec-cccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----G-------LFGIYH-DWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----G-------lig~~h-~wce~f~tyPrtyDllH 788 (870)
-..|||+|||.|.++.+|.+..- ..+|+-+|.. ..+..+.++ | -+-+++ |+ +.....+.+||+|.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAAT 107 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEE
Confidence 35799999999999999988641 1245555544 566666554 2 233333 44 32232347999999
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecChh----------------------hHHHHH----HHHHcCCceE
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS----------------------AVTEVE----NFLKSLHWEI 842 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~----------------------~~~~~~----~~~~~l~W~~ 842 (870)
+.++|..... -.+..+|.++-|+|||||++|+..... ....++ .++.+-.+++
T Consensus 108 ~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLDE-NRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCCH-HHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 9988887642 234579999999999999888774332 123444 7888888888
Q ss_pred EEee-------cCCCceEEEEEeC
Q 002884 843 LFAF-------SKDQEGVLSAQKG 859 (870)
Q Consensus 843 ~~~~-------~~~~e~iL~~~K~ 859 (870)
.... ......|.||+|.
T Consensus 187 ~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 187 RFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEecCCccccCCCCeEEEEEecc
Confidence 7651 1135789999985
No 266
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.46 E-value=3e-08 Score=101.22 Aligned_cols=116 Identities=16% Similarity=0.265 Sum_probs=84.8
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceec-cccccccCCC-CccchhhhhcccccccC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYH-DWCESFSTYP-RSYDLLHADHLFSQLKN 798 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h-~wce~f~tyP-rtyDllHa~~lfS~~~~ 798 (870)
-..|||+|||.|.++.+|.+.+. +|+-+|.. ..+..+.++ +.+++ |..+-..++| .+||+|.+.++|.+...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 35799999999999999988765 45556654 777777777 55554 3333333666 89999999988887652
Q ss_pred CcChhhHHHhhhhcccCCcEEEEecChh-------------------hHHHHHHHHHcCCceEE
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRDEPS-------------------AVTEVENFLKSLHWEIL 843 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird~~~-------------------~~~~~~~~~~~l~W~~~ 843 (870)
-.+..+|.++-|+|||||+++|..... ....+..++....+++.
T Consensus 117 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 117 -ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp -GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred -HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 345789999999999999999985321 13566777777777654
No 267
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.45 E-value=5.3e-08 Score=101.84 Aligned_cols=97 Identities=10% Similarity=0.174 Sum_probs=70.8
Q ss_pred cccccccccchhHHhhhc-CCCeEEEEeccCCCC-CChhHHHhh----CccceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALK-DLQVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~-~~~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|+++.+|+ ..+. +|+-+|.. ..+..+.++ |+..-++-.+..+..+|.+||+|++.++|.+.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~~ 142 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHF 142 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGGT
T ss_pred CEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhhc
Confidence 469999999999999998 3454 45555544 666666655 55333333333334566999999999988876
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.. -....+|-++-|+|||||.++|.+
T Consensus 143 ~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 143 GH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp CT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred Ch-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 42 356789999999999999999985
No 268
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.44 E-value=1.2e-07 Score=94.19 Aligned_cols=118 Identities=18% Similarity=0.255 Sum_probs=82.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cccceecccccccc-CCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFS-TYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~-tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|.++.+|...+. .+|+-+|.. ..+..+.++ |+-. +.-.+..+. ..+.+||+|.++.++..
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~~- 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAEI- 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHHH-
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHHH-
Confidence 4699999999999999988754 345555654 555555554 5533 222222222 23589999999766643
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEec-ChhhHHHHHHHHHcCCceEEEeecCC
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRD-EPSAVTEVENFLKSLHWEILFAFSKD 849 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird-~~~~~~~~~~~~~~l~W~~~~~~~~~ 849 (870)
+..+|.++-|+|||||++++.+ .......+..++....|++......+
T Consensus 138 -----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~~~~ 186 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKMRAG 186 (205)
T ss_dssp -----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEEEET
T ss_pred -----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEeeccC
Confidence 4678999999999999999975 33456788888888888886543333
No 269
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.43 E-value=1.1e-07 Score=98.62 Aligned_cols=117 Identities=13% Similarity=0.136 Sum_probs=82.0
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCCCCccchhhhhccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
-..|||+|||.|.++..|++.+- ..|+-+|.. ..+..+.++ |+ +-+++.-.+.++.-+.+||+|++.++|
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 35799999999999999998733 134444543 555555444 54 344443224444224899999999988
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh---------------------hhHHHHHHHHHcCCceEEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP---------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~---------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
... ++..+|.++-|+|||||+++|.+.. .....+..++....+++..
T Consensus 125 ~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 125 YNI----GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp GGT----CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred eec----CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 765 5778999999999999999998632 1245677777777777654
No 270
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.43 E-value=6e-08 Score=93.92 Aligned_cols=130 Identities=17% Similarity=0.257 Sum_probs=83.5
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc----cceec-cccccccCCCCccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL----FGIYH-DWCESFSTYPRSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl----ig~~h-~wce~f~tyPrtyDllHa~~ 791 (870)
-..|||+|||.|.++.+|...+. +|+-+|.. ..+..+.++ |+ +-+++ |+.+.+. +.+||+|.++.
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~ 127 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADEVK---STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITNP 127 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEECC
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEECC
Confidence 35799999999999999988743 45555543 555555544 54 33444 4544322 57999999977
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecChh-hHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS-AVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~-~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
.|... .-.+..+|.++-|+|+|||.+++..... ....+...++..-+.+........-.+++++|
T Consensus 128 ~~~~~--~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 128 PIRAG--KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp CSTTC--HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEETTEEEEEEEC
T ss_pred Ccccc--hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCCcEEEEEEee
Confidence 66431 1245679999999999999999986543 23335555555534444443344455666655
No 271
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.42 E-value=1.2e-07 Score=95.49 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=69.6
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-ccceeccccccccCCCCccchhhh-hcccccccC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-LFGIYHDWCESFSTYPRSYDLLHA-DHLFSQLKN 798 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-lig~~h~wce~f~tyPrtyDllHa-~~lfS~~~~ 798 (870)
-..|||+|||.|.++..|.+... +|+-+|.. ..+..+.++. -+-+++.-.+.++ ++.+||+|.| .++|.+...
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFR-LGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCC-CSSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcc-cCCCCcEEEEcCchHhhcCC
Confidence 35799999999999999987743 45556654 6777776663 1333332223333 3789999994 557766544
Q ss_pred CcChhhHHHhhhhcccCCcEEEEec
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.-.+..+|.++-|+|||||.++|.+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3456789999999999999999974
No 272
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.42 E-value=5.1e-08 Score=97.40 Aligned_cols=99 Identities=15% Similarity=0.257 Sum_probs=74.1
Q ss_pred cccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----ccceeccccccccCCCCccchhhhhccccc
Q 002884 721 NVRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----LFGIYHDWCESFSTYPRSYDLLHADHLFSQ 795 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h~wce~f~tyPrtyDllHa~~lfS~ 795 (870)
.-..|||+|||.|.++.+|...+ .+|+-+|.. ..+..+.++. -+-+++.-.+.+. .+.+||+|.+.++|.+
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYY 126 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHh
Confidence 34579999999999999999885 367777765 6777766653 2344443333333 3589999999988887
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
....-.+..+|.++-|+|||||++||..
T Consensus 127 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 7654445678999999999999999975
No 273
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.41 E-value=3.5e-08 Score=100.66 Aligned_cols=121 Identities=12% Similarity=0.115 Sum_probs=85.8
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----ccceeccccccccCCCCccchhhhhcccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----LFGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
-..|||+|||.|.++.+|+..+. ..|+-+|.. ..+..+.++- -+-+++.-.+.++.-+.+||+|.+.++|.+.
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 46799999999999999987652 244555543 6677776663 3444443233333224799999998888766
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecCh----------------hhHHHHHHHHHcCCceEEEe
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEP----------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~----------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
.. -.+..+|.++.|+|||||+++|.+.. .....++.+++...|++...
T Consensus 172 ~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 172 TD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred CH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 32 24667999999999999999998741 12478888888888887643
No 274
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.40 E-value=5.5e-08 Score=99.47 Aligned_cols=114 Identities=8% Similarity=0.137 Sum_probs=78.7
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCc---cceeccccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+.. +. +|+-+|.. ..+..+.+ .|+ +-+++.-.+.++. +.+||+|++.+++
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~ 113 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGAT 113 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCG
T ss_pred CEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCCh
Confidence 46999999999999999764 43 33444543 55555544 354 3444432233333 7899999997777
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh----------------------hhHHHHHHHHHcCCceEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP----------------------SAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~----------------------~~~~~~~~~~~~l~W~~~ 843 (870)
-... +...+|-|+-|+|||||+++|.+.. .....+..++....++..
T Consensus 114 ~~~~---~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 182 (256)
T 1nkv_A 114 WIAG---GFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVV 182 (256)
T ss_dssp GGTS---SSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCC
T ss_pred HhcC---CHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeE
Confidence 5543 4678999999999999999998632 123667777877777653
No 275
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.40 E-value=1.1e-07 Score=99.38 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=72.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCC-CCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTY-PRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~ty-PrtyDllHa~~lf 793 (870)
..|||+|||.|.++..|...+. .|+-+|.. ..+..+.++ |+ +-+++.-.+.++.+ +.+||+|.+.++|
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 4699999999999999998865 45555554 666666655 54 44555444455544 4899999999988
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.... +...+|.++-|+|||||+++|.+
T Consensus 147 ~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 147 EWVA---DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp GGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hccc---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 8764 45789999999999999999985
No 276
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.39 E-value=1.2e-07 Score=94.42 Aligned_cols=118 Identities=14% Similarity=0.149 Sum_probs=87.6
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh-CccceeccccccccCCCCccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER-GLFGIYHDWCESFSTYPRSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR-Glig~~h~wce~f~tyPrtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++..|++.+. +|+-+|.. ..+..+.++ ++--+..+.. .++ .+.+||+|.+.++|.... .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~~-~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHVP-R 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGSC-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhcC-H
Confidence 35799999999999999998865 55566654 677777777 4433333443 334 558999999988887654 1
Q ss_pred cChhhHHHhhhhcccCCcEEEEecCh---------------hhHHHHHHHHHcCC-ceEEEe
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDEP---------------SAVTEVENFLKSLH-WEILFA 845 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~~---------------~~~~~~~~~~~~l~-W~~~~~ 845 (870)
-.+..+|-++-|+|||||+++|.... .....++.++.... |++...
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 24567999999999999999998432 24688899999888 887643
No 277
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.37 E-value=4.3e-07 Score=100.20 Aligned_cols=107 Identities=20% Similarity=0.222 Sum_probs=70.3
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccC
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRL 525 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~L 525 (870)
..+.+.+.+. ..++.+|||+|||+|.++..+++ ..|+|+|+++.++..| ....+...+....
T Consensus 27 l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 27 VVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLW 93 (421)
T ss_dssp HHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGC
T ss_pred HHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhc
Confidence 3444554443 13456999999999999988875 3899999999876544 1223334444443
Q ss_pred CCCCCceeEEEeccccccccc---------Ch-------------------HHHHHHHHhhcCCCcEEEEEECC
Q 002884 526 QFPRNVFDLVHCARCRVPWHI---------DG-------------------GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 526 Pfpd~SFDlV~Ss~~alhw~~---------D~-------------------~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+ +.+.||+|+++.-...... +. ..++..+.++|+|||++++..+.
T Consensus 94 ~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 94 E-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp C-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred C-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 3 3568999999732111111 11 25688999999999999988543
No 278
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.37 E-value=7.2e-07 Score=96.07 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=60.6
Q ss_pred CCCCEEEEECC------CCch-hHHHHhc--CCEEEEeCChhhHHHHHHHHHHHcCCCcEE-EEcCcccCCCCCCceeEE
Q 002884 466 KYTRVSLDVGC------GVAS-FGGYLFE--RDVLTMSFAPKDEHDAQIQFALERGIPAIS-AVMGTKRLQFPRNVFDLV 535 (870)
Q Consensus 466 ~~~~~VLDIGC------GtG~-~a~~La~--r~VtgVDiSp~ml~~A~vq~A~ergl~~~~-~v~dae~LPfpd~SFDlV 535 (870)
.++.+|||||| |+|. +++.+.. ..|+|+|+++. + .+ ..+ ...+...++++ ++||+|
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v----------~~--v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V----------SD--ADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B----------CS--SSEEEESCGGGCCCS-SCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C----------CC--CEEEEECccccCCcc-CcccEE
Confidence 46789999999 4465 2222322 47999999996 1 12 234 45556667665 679999
Q ss_pred Eecccccccc----------cC-hHHHHHHHHhhcCCCcEEEEEE
Q 002884 536 HCARCRVPWH----------ID-GGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 536 ~Ss~~alhw~----------~D-~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+|+. ..++. .+ ...+|.++.|+|||||.|++..
T Consensus 128 vsn~-~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 128 ISDM-YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp EECC-CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcC-CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9973 22221 01 2478999999999999999974
No 279
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.37 E-value=9.5e-08 Score=101.12 Aligned_cols=98 Identities=8% Similarity=0.118 Sum_probs=71.1
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----CccceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|+++..|++. +. +|+-+|.. ..+..+.++ |+.+-++-.+..+..++.+||+|.+.++|.+.
T Consensus 74 ~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~~~ 150 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAEYDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHF 150 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGT
T ss_pred CEEEEeeccCcHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHHhc
Confidence 46999999999999999887 63 45555554 666666555 55433332222223348999999999988876
Q ss_pred cCC------cChhhHHHhhhhcccCCcEEEEec
Q 002884 797 KNR------CKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 797 ~~r------c~~~~vl~EmDRILRPgG~~iird 823 (870)
.+. -.+..+|-++-|+|||||.++|.+
T Consensus 151 ~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 151 ADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp TCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 432 345689999999999999999985
No 280
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.37 E-value=2e-07 Score=95.41 Aligned_cols=120 Identities=11% Similarity=0.071 Sum_probs=82.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-----------------------------------c
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-----------------------------------L 766 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-----------------------------------l 766 (870)
..|||+|||.|.++..|...+. .+|+-+|.. ..+..+.++- .
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 135 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRA 135 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred CEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhh
Confidence 5699999999999999988765 456666654 5555554331 0
Q ss_pred c-ceec-cccccccC-CC---CccchhhhhcccccccCC-cChhhHHHhhhhcccCCcEEEEecChh-------------
Q 002884 767 F-GIYH-DWCESFST-YP---RSYDLLHADHLFSQLKNR-CKLVPVMAEVDRIVRPGGKLIVRDEPS------------- 826 (870)
Q Consensus 767 i-g~~h-~wce~f~t-yP---rtyDllHa~~lfS~~~~r-c~~~~vl~EmDRILRPgG~~iird~~~------------- 826 (870)
+ .+++ |..+. .+ -+ .+||+|.+.++|...... -.+..+|-++-|+|||||+||+.+...
T Consensus 136 v~~~~~~d~~~~-~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 136 IKQVLKCDVTQS-QPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp EEEEEECCTTSS-STTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred heeEEEeeeccC-CCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 3 3333 34332 23 23 799999998877643221 245679999999999999999986221
Q ss_pred ---hHHHHHHHHHcCCceEEEe
Q 002884 827 ---AVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 827 ---~~~~~~~~~~~l~W~~~~~ 845 (870)
....+..++....+++...
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~ 236 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQF 236 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEE
Confidence 2458888898888887544
No 281
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.36 E-value=3.2e-07 Score=88.79 Aligned_cols=132 Identities=13% Similarity=0.095 Sum_probs=89.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc-cceec-cccccccCCC-Cccchhhhh-cccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL-FGIYH-DWCESFSTYP-RSYDLLHAD-HLFSQL 796 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl-ig~~h-~wce~f~tyP-rtyDllHa~-~lfS~~ 796 (870)
-..|||+|||.|.++..|...+. +|+-+|.. ..+..+.++.- +.+++ |..+ + ++| .+||+|.+. .++.+.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~-~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-D-QISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-S-CCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-C-CCCCCceeEEEECCcHHhhc
Confidence 35799999999999999988764 45555554 55555555431 33333 3332 2 243 799999997 566554
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecCh---hhHHHHHHHHHcCCceEEEeecC---------CCceEEEEEeC
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEP---SAVTEVENFLKSLHWEILFAFSK---------DQEGVLSAQKG 859 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~---~~~~~~~~~~~~l~W~~~~~~~~---------~~e~iL~~~K~ 859 (870)
.. -....+|.++-|+|+|||.+|+.... .....+..++....+++...... .+--+++++|+
T Consensus 122 ~~-~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 AE-DGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred Ch-HHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 21 23467999999999999999997543 34678888888888888654221 23457777774
No 282
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.36 E-value=8.9e-08 Score=98.01 Aligned_cols=116 Identities=14% Similarity=0.170 Sum_probs=81.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|....-- .|+-+|.. ..+..+.++ |+ +-+++.-.+.++.-+.+||+|++.++|.
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 47999999999999999876310 45555544 555554443 55 3344432244432248999999998887
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh---------------------hhHHHHHHHHHcCCceEEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP---------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~---------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
+. +...+|-++-|+|||||+++|.+.. .....+..++....+++..
T Consensus 126 ~~----~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 126 NI----GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CC----CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hc----CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 65 5778999999999999999998631 1245677778888877654
No 283
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.36 E-value=2.2e-07 Score=92.59 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=72.1
Q ss_pred cccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceec-cccccccCCC-Cccchhhhhccccccc
Q 002884 721 NVRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYH-DWCESFSTYP-RSYDLLHADHLFSQLK 797 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h-~wce~f~tyP-rtyDllHa~~lfS~~~ 797 (870)
.-.+|||+|||.|.++.+|...+. +|+-+|.. ..+..+.++.. .+++ |..+...++| .+||+|.+.++|.+..
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENGT---RVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTTC---EEEEEESSHHHHHHHHTTSS-EEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 346799999999999999998863 56666654 56666665543 3343 4444335565 8999999988887665
Q ss_pred CCcChhhHHHhhhhcccCCcEEEEec
Q 002884 798 NRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 798 ~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+...+|.++-|+|+|||++++..
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 35689999999999999999975
No 284
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.36 E-value=3.3e-07 Score=92.62 Aligned_cols=95 Identities=18% Similarity=0.288 Sum_probs=68.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCCCccchhhhhc-cccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYPRSYDLLHADH-LFSQ 795 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyPrtyDllHa~~-lfS~ 795 (870)
..|||+|||.|.++..|... .+|+-+|.. ..+..+.++ |. +-+++.-...+ ++|.+||+|.+.+ +|.+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMREL-ELPEPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGC-CCSSCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhc-CCCCCcCEEEEeCCchhh
Confidence 57999999999999999887 356666654 666666554 21 33333222222 3468999999875 7776
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
....-.+..+|.++-|+|||||.+|+.
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 655456678999999999999999983
No 285
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.36 E-value=6.8e-07 Score=96.38 Aligned_cols=128 Identities=16% Similarity=0.208 Sum_probs=86.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh--Cccceec-c--ccccccCCC-Cccchhhhhccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER--GLFGIYH-D--WCESFSTYP-RSYDLLHADHLFSQ 795 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR--Glig~~h-~--wce~f~tyP-rtyDllHa~~lfS~ 795 (870)
+.|||+|||+|+|+..|+..+. -.|+-+|-. ++|...+.+ .++.+-. + ... ...+| .+||++-++-.|.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~-~~~l~~~~fD~v~~d~sf~- 162 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE-PVDFTEGLPSFASIDVSFI- 162 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCC-GGGCTTCCCSEEEECCSSS-
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecc-hhhCCCCCCCEEEEEeeHh-
Confidence 4699999999999999988764 245566654 788774432 1211111 1 111 12245 4599999887775
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEecC----------------------hhhHHHHHHHHHcCCceEEEe-ec-----
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVRDE----------------------PSAVTEVENFLKSLHWEILFA-FS----- 847 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iird~----------------------~~~~~~~~~~~~~l~W~~~~~-~~----- 847 (870)
++..+|-|+-|+|||||.+|+-.. ...+..+...+....|.+... ++
T Consensus 163 -----sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~ 237 (291)
T 3hp7_A 163 -----SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGG 237 (291)
T ss_dssp -----CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCG
T ss_pred -----hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Confidence 357799999999999999988611 124678888999999998654 22
Q ss_pred -CCCceEEEEEeC
Q 002884 848 -KDQEGVLSAQKG 859 (870)
Q Consensus 848 -~~~e~iL~~~K~ 859 (870)
.+.|-++.++|.
T Consensus 238 ~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 238 HGNIEFLAHLEKT 250 (291)
T ss_dssp GGCCCEEEEEEEC
T ss_pred CcCHHHHHHhhhc
Confidence 245777777773
No 286
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.36 E-value=4.3e-07 Score=87.38 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=79.4
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----Ccc-c-eec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GLF-G-IYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Gli-g-~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+.. +- ..|+-+|.. ..+..+.++ |+- . .++ +..+.+...+.+||+|.+.+.+
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCcc
Confidence 46999999999999999877 22 244555554 566666544 543 1 333 4555554444899999987666
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCceEEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~~~~ 844 (870)
.. ..+|-++-|+|||||.+++.+. ......+..+++...+++..
T Consensus 105 ~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 105 TA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp TC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred cH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 43 5699999999999999999864 44566777788877776643
No 287
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.35 E-value=2.8e-07 Score=89.97 Aligned_cols=133 Identities=14% Similarity=0.147 Sum_probs=82.7
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCC-CCccchhhhh-ccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTY-PRSYDLLHAD-HLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~ty-PrtyDllHa~-~lf 793 (870)
..|||+|||.|.++..|++.+. .|+-+|.. ..+..+.++ |+ +-++++-.+.+..| +.+||+|.++ +.+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 4599999999999999998843 55566654 566555443 55 55566656665555 4899999664 322
Q ss_pred cccc-----CCcChhhHHHhhhhcccCCcEEEEecC------hhhHHHHHHHHHcCC---ceEEEe-e--c-CCCceEEE
Q 002884 794 SQLK-----NRCKLVPVMAEVDRIVRPGGKLIVRDE------PSAVTEVENFLKSLH---WEILFA-F--S-KDQEGVLS 855 (870)
Q Consensus 794 S~~~-----~rc~~~~vl~EmDRILRPgG~~iird~------~~~~~~~~~~~~~l~---W~~~~~-~--~-~~~e~iL~ 855 (870)
.... ..-....+|.++-|+|||||.+++..- ......+...+..+. |.+... + . ..+..+++
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 180 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLVM 180 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEEE
Confidence 2100 111233678999999999999998742 223456666676665 666433 1 2 23345555
Q ss_pred EEe
Q 002884 856 AQK 858 (870)
Q Consensus 856 ~~K 858 (870)
..|
T Consensus 181 i~~ 183 (185)
T 3mti_A 181 LEK 183 (185)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 288
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.35 E-value=1.5e-07 Score=94.23 Aligned_cols=120 Identities=17% Similarity=0.249 Sum_probs=85.1
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-------cceeccccccccCCCCccchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-------FGIYHDWCESFSTYPRSYDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-------ig~~h~wce~f~tyPrtyDllHa~ 790 (870)
..|||+|||.|.++.+|+..+. +|+-+|.. ..+..+.++ |+ +-++..=.+.++.-+.+||+|.+.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 4699999999999999998865 55666654 566666553 33 233332223333224899999998
Q ss_pred cccccccCCcChhhHHHhhhhcccCCcEEEEecC-----------------------------------------hhhHH
Q 002884 791 HLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-----------------------------------------PSAVT 829 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~-----------------------------------------~~~~~ 829 (870)
++|....+.-....+|-++-|+|||||.+|+.+. .....
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEK 188 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHH
T ss_pred chhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHH
Confidence 8888765433344799999999999999999753 12367
Q ss_pred HHHHHHHcCCceEEEe
Q 002884 830 EVENFLKSLHWEILFA 845 (870)
Q Consensus 830 ~~~~~~~~l~W~~~~~ 845 (870)
.++.+++...+++...
T Consensus 189 ~l~~ll~~aGf~~~~~ 204 (235)
T 3sm3_A 189 ELVFLLTDCRFEIDYF 204 (235)
T ss_dssp HHHHHHHTTTEEEEEE
T ss_pred HHHHHHHHcCCEEEEE
Confidence 8888888888887643
No 289
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.35 E-value=5.8e-07 Score=91.21 Aligned_cols=117 Identities=16% Similarity=0.180 Sum_probs=84.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----c---cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----L---FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----l---ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+..+. .|+-+|.. ..+..+.++. + +-++. |+.+ +. .+.+||+|.+.++|
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYVFF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEESST
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEEChhh
Confidence 3799999999999999998765 45566654 5666665553 3 22333 3332 22 33799999998888
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh-----------hhHHHHHHHHHcCCceEEEe
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-----------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~-----------~~~~~~~~~~~~l~W~~~~~ 845 (870)
.... .-....+|-++-|+|||||++|+.+-. .....+..++....|++...
T Consensus 143 ~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 143 CAIE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TTSC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEE
T ss_pred hcCC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEE
Confidence 7654 235668999999999999999986421 13688999999999998654
No 290
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.35 E-value=9.8e-08 Score=100.29 Aligned_cols=96 Identities=23% Similarity=0.297 Sum_probs=69.9
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCc---cceeccccccccCCC-Cccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYHDWCESFSTYP-RSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h~wce~f~tyP-rtyDllHa~~ 791 (870)
-..|||+|||.|.++..|... +. .|+-+|.. ..+..+.+ .|+ +-+++.-.+.+ ++| .+||+|++.+
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-PCEDNSYDFIWSQD 158 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-SSCTTCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-CCCCCCEeEEEecc
Confidence 357999999999999999876 54 45555544 55555544 454 34444323333 344 7999999988
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
+|.+... ...+|-|+-|+|||||+++|.+.
T Consensus 159 ~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 159 AFLHSPD---KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CGGGCSC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhhcCC---HHHHHHHHHHHcCCCeEEEEEEe
Confidence 8887654 67899999999999999999963
No 291
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.34 E-value=8.8e-07 Score=98.90 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=85.9
Q ss_pred CCEEEEECCCCchhHHHHhc---------------------CCEEEEeCChhhHHHHHHH-------HHHHcCC-CcEEE
Q 002884 468 TRVSLDVGCGVASFGGYLFE---------------------RDVLTMSFAPKDEHDAQIQ-------FALERGI-PAISA 518 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~---------------------r~VtgVDiSp~ml~~A~vq-------~A~ergl-~~~~~ 518 (870)
..+|+|+||++|..+..+.. -.|..-|+..++...-... .....|. ....+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 57899999999976654432 1466778876655322211 1122221 11233
Q ss_pred EcCc----ccCCCCCCceeEEEecccccccccChHH------------------------H---------------HHHH
Q 002884 519 VMGT----KRLQFPRNVFDLVHCARCRVPWHIDGGK------------------------L---------------LLEL 555 (870)
Q Consensus 519 v~da----e~LPfpd~SFDlV~Ss~~alhw~~D~~~------------------------v---------------L~Ei 555 (870)
+.+. ....||+++||+|+|+. ++||..+.+. + |+-.
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3331 34568999999999995 5999854421 1 5555
Q ss_pred HhhcCCCcEEEEEECCCcCch--h-----HHHHHHHhh-----------cccccccchhHHHHHHHHHhhc-cceEEE
Q 002884 556 NRVLRPGGYFVWSATPVYQKL--G-----EDVEIWNAM-----------SNLTVSMCWELVTIKMDKLNSA-GFAIYR 614 (870)
Q Consensus 556 ~RVLKPGG~Lv~S~~p~~~tL--~-----El~~~w~~~-----------~~la~~mcW~~va~~~~~L~da-GfaI~r 614 (870)
.|.|+|||.|+++ ..+.... . .+..+|..+ +.+..........+....+... +|.|.+
T Consensus 212 a~eL~pGG~mvl~-~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~ 288 (384)
T 2efj_A 212 SEELISRGRMLLT-FICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILY 288 (384)
T ss_dssp HHHEEEEEEEEEE-EECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEE
T ss_pred HHHhccCCeEEEE-EecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEE
Confidence 8999999999998 4444444 2 566677543 1122223333344555666665 466655
No 292
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.34 E-value=1.8e-07 Score=97.79 Aligned_cols=95 Identities=9% Similarity=0.203 Sum_probs=69.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-ccceeccccccccCCCCccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-LFGIYHDWCESFSTYPRSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-lig~~h~wce~f~tyPrtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++.+|.+.+. .|+-+|.. ..+..+.++. -+.++..-.+.++ ++.+||+|++.++|-...
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~-- 131 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADARNFR-VDKPLDAVFSNAMLHWVK-- 131 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCTTTCC-CSSCEEEEEEESCGGGCS--
T ss_pred CCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECChhhCC-cCCCcCEEEEcchhhhCc--
Confidence 45799999999999999988654 44555544 6677776663 1333333233433 579999999988877654
Q ss_pred cChhhHHHhhhhcccCCcEEEEec
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird 823 (870)
+...+|.|+-|+|||||++++..
T Consensus 132 -d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 132 -EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHhcCCCcEEEEEe
Confidence 46789999999999999999974
No 293
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.34 E-value=2.2e-06 Score=96.69 Aligned_cols=103 Identities=13% Similarity=0.087 Sum_probs=71.6
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----------------CCEEEEeCChhhHHHHHHHHHHHcCC---CcEEEEcCcccC
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----------------RDVLTMSFAPKDEHDAQIQFALERGI---PAISAVMGTKRL 525 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----------------r~VtgVDiSp~ml~~A~vq~A~ergl---~~~~~v~dae~L 525 (870)
..+.+|||.|||+|.++..+++ ..++|+|+++.++..|+.... .+|+ ...+...+....
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~-l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY-LHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH-HTTCCSSCCSEEECCTTTS
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH-HhCCCcCCCCEeeCCCCCC
Confidence 4567999999999998766542 479999999999888775443 3455 233444454444
Q ss_pred CCCCCceeEEEecccccc--cccC--------------hHHHHHHHHhhcCCCcEEEEEEC
Q 002884 526 QFPRNVFDLVHCARCRVP--WHID--------------GGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 526 Pfpd~SFDlV~Ss~~alh--w~~D--------------~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
+.. ..||+|+++.-..+ +... ...++..+.++|||||++++..+
T Consensus 249 ~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 249 EPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 433 48999999843221 1110 13789999999999999998743
No 294
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.34 E-value=2e-07 Score=94.37 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=85.7
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc---cceeccccccccCCCCccchhhhhcccccccC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL---FGIYHDWCESFSTYPRSYDLLHADHLFSQLKN 798 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl---ig~~h~wce~f~tyPrtyDllHa~~lfS~~~~ 798 (870)
..|||+|||.|.++.+|...+. +|+-+|.. ..+..+.+++. +-+++.-.+.++.-+.+||+|.+.++|.+..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE- 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS-
T ss_pred CeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc-
Confidence 4799999999999999998865 45556654 67777777742 2233322333332248999999988887663
Q ss_pred CcChhhHHHhhhhcccCCcEEEEecCh----------------------hhHHHHHHHHHcCCceEEEe
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRDEP----------------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird~~----------------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
+...+|.++-|+|||||+++|.+.. .....++.++....|++...
T Consensus 131 --~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 131 --EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred --CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 4567999999999999999998521 22467889999999987643
No 295
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.33 E-value=1.5e-07 Score=96.27 Aligned_cols=95 Identities=19% Similarity=0.367 Sum_probs=69.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCCC-Cccchhhhhccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTYP-RSYDLLHADHLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~tyP-rtyDllHa~~lf 793 (870)
-..|||+|||.|.++.+|....- +|+-+|.. ..+..+.++ |+ +-+++.-.+.++ ++ .+||+|++.+++
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~l 97 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRYAA 97 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEESCG
T ss_pred CCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECCch
Confidence 35799999999999999988753 55556654 556555443 54 334443334543 54 899999998877
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
-+.. ++..+|.++-|+|||||+++|.+
T Consensus 98 ~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 98 HHFS---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp GGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcc---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7654 46789999999999999999975
No 296
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.32 E-value=8.3e-07 Score=97.76 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcC-cccC-C-CCC-------------
Q 002884 468 TRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMG-TKRL-Q-FPR------------- 529 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~d-ae~L-P-fpd------------- 529 (870)
+.+|||+|||+|.++..|+.. .|+|+|+++.++..|+. .+...++.++.++.+ ...+ + +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~-n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQY-NIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHH-HHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999999874 89999999999998874 455567766655554 3222 1 111
Q ss_pred -CceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 530 -NVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 530 -~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
..||+|++..- . ..+..++.++|+|+|.+++.+
T Consensus 293 ~~~fD~Vv~dPP---r----~g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 293 SYQCETIFVDPP---R----SGLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GCCEEEEEECCC---T----TCCCHHHHHHHTTSSEEEEEE
T ss_pred cCCCCEEEECcC---c----cccHHHHHHHHhCCCEEEEEE
Confidence 37999997531 1 134566778888988888763
No 297
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.32 E-value=1.1e-06 Score=93.95 Aligned_cols=118 Identities=16% Similarity=0.205 Sum_probs=72.9
Q ss_pred cccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc
Q 002884 445 IHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM 520 (870)
Q Consensus 445 ~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~ 520 (870)
++++.++++...+. ...++.+|||||||+|.|+.+++.. .|.++|+.-.+ ...... ....+...+.+..
T Consensus 57 SRaA~KL~ei~ek~-----~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl-~~~pi~-~~~~g~~ii~~~~ 129 (277)
T 3evf_A 57 SRGTAKLRWFHERG-----YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG-HEKPMN-VQSLGWNIITFKD 129 (277)
T ss_dssp STHHHHHHHHHHTT-----SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT-CCCCCC-CCBTTGGGEEEEC
T ss_pred ccHHHHHHHHHHhC-----CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC-cccccc-cCcCCCCeEEEec
Confidence 44555555444442 1245779999999999999987754 67788887432 100000 0011223344444
Q ss_pred CcccCCCCCCceeEEEeccc---ccccccChH--HHHHHHHhhcCCC-cEEEEEE
Q 002884 521 GTKRLQFPRNVFDLVHCARC---RVPWHIDGG--KLLLELNRVLRPG-GYFVWSA 569 (870)
Q Consensus 521 dae~LPfpd~SFDlV~Ss~~---alhw~~D~~--~vL~Ei~RVLKPG-G~Lv~S~ 569 (870)
+.....++.+.||+|+|..+ ..+|.+... .+|..+.++|+|| |.|++..
T Consensus 130 ~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KV 184 (277)
T 3evf_A 130 KTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKV 184 (277)
T ss_dssp SCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred cceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEe
Confidence 44556778889999999642 222433322 4578889999999 9999974
No 298
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.32 E-value=1.6e-07 Score=96.75 Aligned_cols=96 Identities=18% Similarity=0.291 Sum_probs=69.9
Q ss_pred cccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCCC-Cccchhhhhcc
Q 002884 721 NVRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTYP-RSYDLLHADHL 792 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~tyP-rtyDllHa~~l 792 (870)
.-..|||+|||.|.++..|....- .|+-+|.. ..+..+.++ |+ +-++..-.+.+ ++| .+||+|++..+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-PFTDERFHIVTCRIA 112 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-CSCTTCEEEEEEESC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-CCCCCCEEEEEEhhh
Confidence 345799999999999999988753 56666654 666665554 54 33333223333 355 89999999877
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+-... +...+|.|+-|+|||||+|+|.+
T Consensus 113 l~~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 113 AHHFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp GGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 76654 46789999999999999999974
No 299
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.32 E-value=1.8e-07 Score=95.73 Aligned_cols=117 Identities=15% Similarity=0.211 Sum_probs=83.3
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhhC----ccceec-cccccccCC-CCccchhhhhccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYERG----LFGIYH-DWCESFSTY-PRSYDLLHADHLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h-~wce~f~ty-PrtyDllHa~~lf 793 (870)
-..|||+|||.|.++.+|+.. +. .|+-+|.. ..+..+.++. -+-+++ |+.+ + ++ +.+||+|++.++|
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~-~~~~~~fD~v~~~~~l 130 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-K-EFPENNFDLIYSRDAI 130 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-C-CCCTTCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-C-CCCCCcEEEEeHHHHH
Confidence 357999999999999999876 43 45555544 6777777764 233344 4433 3 45 4899999998888
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh----------------------hhHHHHHHHHHcCCceEEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP----------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~----------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
.+... -+...+|-++-|+|||||+++|.+.. .....+..++....++...
T Consensus 131 ~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 202 (266)
T 3ujc_A 131 LALSL-ENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVV 202 (266)
T ss_dssp GGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred HhcCh-HHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77621 34668999999999999999998621 1246677777777776643
No 300
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.31 E-value=2.5e-07 Score=94.82 Aligned_cols=96 Identities=11% Similarity=0.177 Sum_probs=71.1
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc---cceeccccccccCCCCccchhhhhccccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL---FGIYHDWCESFSTYPRSYDLLHADHLFSQLK 797 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl---ig~~h~wce~f~tyPrtyDllHa~~lfS~~~ 797 (870)
-..|||+|||.|.++.+|++.+.- +|+-+|.. ..+..+.++.- +-++..=.+.++.-+.+||+|.+.++|....
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 357999999999999999888541 45566654 67777777642 3333322234332248999999999887763
Q ss_pred CCcChhhHHHhhhhcccCCcEEEEe
Q 002884 798 NRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 798 ~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
++..+|-++-|+|||||.+||.
T Consensus 123 ---~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 123 ---SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---hHHHHHHHHHHHcCCCcEEEEE
Confidence 4678999999999999999997
No 301
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.31 E-value=3.1e-07 Score=96.09 Aligned_cols=116 Identities=18% Similarity=0.280 Sum_probs=80.7
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceec-cccccccCCCCccchhhhhcccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYH-DWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h-~wce~f~tyPrtyDllHa~~lfS 794 (870)
-..|||+|||.|.++.+|+..+. +|+-+|.. ..+..+.++ |+ +-+++ |.. .+.. +.+||+|.+.++|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDIN-AANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGG-GCCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccc-cccc-cCCccEEEEccchh
Confidence 35699999999999999998865 56666654 555554443 54 22333 332 2222 78999999999887
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh--------------hhHHHHHHHHHcCCceEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~--------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
+... -.+..+|-++-|+|||||+++|.... .....++.++.. |++...
T Consensus 196 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 196 FLNR-ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp GSCG-GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 6532 35667999999999999997775321 114677888777 887654
No 302
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.30 E-value=7.1e-07 Score=91.57 Aligned_cols=134 Identities=19% Similarity=0.238 Sum_probs=88.4
Q ss_pred ccccccccccchhHHhhhc--CCCeEEEEeccCCCC-CChhHHHh----hCc--cceeccccccccC---CCCccchhhh
Q 002884 722 VRNVMDMRAVYGGFAAALK--DLQVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYHDWCESFST---YPRSYDLLHA 789 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~--~~~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h~wce~f~t---yPrtyDllHa 789 (870)
-..|||+|||.|.++..|+ ..+. .|+-+|.. ..+.++.+ .|+ +-+++.-.+.+.. ++.+||+|.+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3579999999999988887 3333 34455544 45555443 365 4555543344432 2579999998
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEecC---hhhHHHHHHHHHcCCceEEEe--e-c---CCCceEEEEEeCC
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE---PSAVTEVENFLKSLHWEILFA--F-S---KDQEGVLSAQKGN 860 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~---~~~~~~~~~~~~~l~W~~~~~--~-~---~~~e~iL~~~K~~ 860 (870)
..+ ..+..++-++-|+|||||+|++.+. .+.+..+...++...+.+... . . +..-.+++++|.=
T Consensus 148 ~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k~~ 220 (240)
T 1xdz_A 148 RAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIK 220 (240)
T ss_dssp ECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEECS
T ss_pred ecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEecC
Confidence 653 4577899999999999999998753 334556777778888876432 1 1 1234577778865
Q ss_pred CCCCC
Q 002884 861 WQPDT 865 (870)
Q Consensus 861 w~~~~ 865 (870)
..|..
T Consensus 221 ~~~~~ 225 (240)
T 1xdz_A 221 NTPKK 225 (240)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 55543
No 303
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.30 E-value=2.2e-07 Score=94.86 Aligned_cols=121 Identities=18% Similarity=0.206 Sum_probs=84.4
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc------cceeccccccccCCCCccchhhhhcccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL------FGIYHDWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl------ig~~h~wce~f~tyPrtyDllHa~~lfS 794 (870)
-..|||+|||.|.++.+|+.... ..|+-+|.. ..+..+.++.- +-+++.-.+.+..-+.+||+|.+.++|.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 46799999999999999988752 245555544 56666665531 2233322333333346899999988877
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecChh---------------hHHHHHHHHHcCCceEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS---------------AVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~~---------------~~~~~~~~~~~l~W~~~~~ 845 (870)
.... -.+..+|.++-|+|||||++||.+... ....++.++....+++...
T Consensus 158 ~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 158 HLTD-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp GSCH-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hCCH-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 6543 124579999999999999999976421 3688889999888887654
No 304
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.30 E-value=1.7e-07 Score=99.66 Aligned_cols=98 Identities=10% Similarity=0.145 Sum_probs=71.0
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----CccceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|.++..|.+. +. .|+-+|.. ..+..+.++ |+..-+.-.+..+..+|.+||+|.+.++|.+.
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~~ 168 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEHF 168 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGGT
T ss_pred CEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHhc
Confidence 46999999999999999876 54 45555544 666666655 55332333333334457999999998888765
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
.. -.+..+|-++-|+|||||.++|.+.
T Consensus 169 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 169 GH-ENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CG-GGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CH-HHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 32 2467799999999999999999853
No 305
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.29 E-value=1.7e-07 Score=99.06 Aligned_cols=94 Identities=7% Similarity=0.060 Sum_probs=67.3
Q ss_pred cccccccccccchhHHhhhc---CCCeEEEEeccCCCC-CChhHHHhh-----Cc---cceeccccccccCCC------C
Q 002884 721 NVRNVMDMRAVYGGFAAALK---DLQVWVMNVVNVNSP-DTLPIIYER-----GL---FGIYHDWCESFSTYP------R 782 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~---~~~vwvmNvvp~~~~-~tl~~i~eR-----Gl---ig~~h~wce~f~tyP------r 782 (870)
.-..|||+|||.|.++..|+ .... +|+-+|.. ..+..+.++ |+ +-+++.-.+.++.-+ .
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFE---QIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCS---EEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCC
Confidence 45679999999999999998 4443 45555554 666666665 32 333333233333222 6
Q ss_pred ccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEE
Q 002884 783 SYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIV 821 (870)
Q Consensus 783 tyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~ii 821 (870)
+||+|++.++|... ++..+|.++-|+|||||+++|
T Consensus 113 ~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 113 KIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 99999998887765 678899999999999999998
No 306
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.29 E-value=1.3e-07 Score=98.87 Aligned_cols=100 Identities=18% Similarity=0.298 Sum_probs=71.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----cc------ceec-ccccccc---CCCCccch
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----LF------GIYH-DWCESFS---TYPRSYDL 786 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----li------g~~h-~wce~f~---tyPrtyDl 786 (870)
-..|||+|||.|.++..|++.+. +|+-+|.. ..+..+.++. .- -+.+ ++.+ ++ .-+.+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeEE
Confidence 35799999999999999999876 67777765 6777776542 11 1122 2222 12 22489999
Q ss_pred hhhh-cccccccC----CcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 787 LHAD-HLFSQLKN----RCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 787 lHa~-~lfS~~~~----rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
|+|. .+|.+... .-.+..+|-++.|+|||||++||..+.
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9997 67776554 344778999999999999999998643
No 307
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.28 E-value=4.3e-07 Score=91.75 Aligned_cols=135 Identities=16% Similarity=0.179 Sum_probs=87.5
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhhC----ccceeccccccccCCCCccchhhhhccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYERG----LFGIYHDWCESFSTYPRSYDLLHADHLFSQ 795 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h~wce~f~tyPrtyDllHa~~lfS~ 795 (870)
..|||+|||.|.++.+|... +. +|+-+|.. ..+..+.++- -+-+++.-.+.+ +++.+||+|.+.++|..
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKY-DFEEKYDMVVSALSIHH 121 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTC-CCCSCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhcc-CCCCCceEEEEeCcccc
Confidence 57999999999999999876 33 44455543 5666666652 122333222222 23489999999888876
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEecCh-----------------------------------------hhHHHHHHH
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-----------------------------------------SAVTEVENF 834 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iird~~-----------------------------------------~~~~~~~~~ 834 (870)
... -....+|-++-|+|||||+++|.+.. .....+..+
T Consensus 122 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 122 LED-EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp SCH-HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 632 12235899999999999999998621 112455667
Q ss_pred HHcCCceEEEe-ecCCCceEEEEEeCCCC
Q 002884 835 LKSLHWEILFA-FSKDQEGVLSAQKGNWQ 862 (870)
Q Consensus 835 ~~~l~W~~~~~-~~~~~e~iL~~~K~~w~ 862 (870)
++.-.++.... +..-.-.+++..|+-|.
T Consensus 201 l~~aGF~~v~~~~~~~~~~~~~~~~~~~~ 229 (234)
T 3dtn_A 201 LKEAGFRDVSCIYKYYQFAVMFGRKTEGH 229 (234)
T ss_dssp HHHTTCEEEEEEEEETTEEEEEEECC---
T ss_pred HHHcCCCceeeeeeecceeEEEEEecccc
Confidence 77778876533 33445677888777664
No 308
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.28 E-value=2.4e-07 Score=97.43 Aligned_cols=97 Identities=15% Similarity=0.200 Sum_probs=68.3
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCCCccchhhhhcc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyPrtyDllHa~~l 792 (870)
-.+|||+|||+|.++..|++. +. .|+-+|.. ..+..+.++ |+ +-++++-++.+ ++|.+||+||+.++
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAICHAF 98 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEEEESC
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhc-CcCCCeeEEEECCh
Confidence 457999999999999999876 23 33334433 444444443 21 33344323333 45789999999988
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
|.... +...+|.++-|+|||||++++.++.
T Consensus 99 l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 99 LLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 87664 4568999999999999999988765
No 309
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.28 E-value=1.4e-07 Score=99.46 Aligned_cols=97 Identities=8% Similarity=0.177 Sum_probs=69.7
Q ss_pred ccccccccchhHHhhhcCC----CeEEEEeccCCCC-CChhHHHhh----CccceeccccccccCCC-Cccchhhhhccc
Q 002884 724 NVMDMRAVYGGFAAALKDL----QVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFSTYP-RSYDLLHADHLF 793 (870)
Q Consensus 724 nvmDm~ag~GgfaaaL~~~----~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~tyP-rtyDllHa~~lf 793 (870)
.|||+|||+|.++.+|+.. ++ .|+-+|.. .+|..+.+| |+..-+.-.|..+..+| ..||+|.+..++
T Consensus 73 ~vLDlGcGtG~~~~~la~~~~~~~~---~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l 149 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRRNIHHDNC---KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTL 149 (261)
T ss_dssp EEEEETCTTTHHHHHHHHTCCSSSC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCG
T ss_pred EEEEEeCCCCHHHHHHHHhcCCCCC---EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeee
Confidence 5999999999999888753 43 45666755 777777665 55444444455555666 679999887666
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
.+... -....+|-||-|+|||||.|||.|.
T Consensus 150 ~~~~~-~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 150 QFLEP-SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GGSCH-HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eecCc-hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 55431 2334689999999999999999864
No 310
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.27 E-value=1.2e-06 Score=90.99 Aligned_cols=120 Identities=13% Similarity=0.182 Sum_probs=86.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCC-CCccchhhhhcc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTY-PRSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~ty-PrtyDllHa~~l 792 (870)
..|||+|||.|.++..|+.++-. .|+-+|.. ..+..+.++ |+ +-+++ |+.+....+ +.+||+|-++--
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 46999999999999999988543 66677764 555554433 55 45555 444443335 489999998755
Q ss_pred cccc-----------------cCCcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEEE
Q 002884 793 FSQL-----------------KNRCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 793 fS~~-----------------~~rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~ 844 (870)
|... ...+.+..+|.++-|+|||||.|++--+.+.+..+...++...|....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 4322 112557789999999999999999987778888899999988888753
No 311
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.26 E-value=5.5e-07 Score=93.92 Aligned_cols=124 Identities=16% Similarity=0.175 Sum_probs=87.2
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceec-cccccccCC-CCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYH-DWCESFSTY-PRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h-~wce~f~ty-PrtyDllHa~~lfS 794 (870)
..|||+|||.|.++.+|...+. .|+-+|.. ..+..+.++ |+ +-+++ ++.+. + +..||+|.++.++.
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~---~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA---LPFGPFDLLVANLYAE 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH---GGGCCEEEEEEECCHH
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc---CcCCCCCEEEECCcHH
Confidence 4699999999999999988765 56666653 566555553 55 44444 34332 4 37899999865543
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
.+..++-++-|+|||||++++.+. ......+...++...|++......+.=..|+++|
T Consensus 196 ------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 196 ------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp ------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEETTEEEEEEEC
T ss_pred ------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEeccCCeEEEEEEC
Confidence 246789999999999999999853 3446888888998889886554444334555554
No 312
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.26 E-value=4.1e-07 Score=94.87 Aligned_cols=135 Identities=10% Similarity=0.038 Sum_probs=86.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh-----------------------------------Cc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER-----------------------------------GL 766 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR-----------------------------------Gl 766 (870)
..|||+|||+|.++..++..++ -+|+-+|-. .+|..+.++ .-
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 4599999999999888887775 356666654 555544331 01
Q ss_pred cc-ee-cccccc--ccCC-CCccchhhhhcccccc-cCCcChhhHHHhhhhcccCCcEEEEecCh---------------
Q 002884 767 FG-IY-HDWCES--FSTY-PRSYDLLHADHLFSQL-KNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------- 825 (870)
Q Consensus 767 ig-~~-h~wce~--f~ty-PrtyDllHa~~lfS~~-~~rc~~~~vl~EmDRILRPgG~~iird~~--------------- 825 (870)
|. ++ .|..+. +... ..+||+|.|..+|... ...-++..+|-+|-|+|||||+|||++..
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 11 22 244442 2222 3589999998877653 22234567999999999999999999521
Q ss_pred -hhHHHHHHHHHcCCceEEEeec-C----------CCceEEEEEeC
Q 002884 826 -SAVTEVENFLKSLHWEILFAFS-K----------DQEGVLSAQKG 859 (870)
Q Consensus 826 -~~~~~~~~~~~~l~W~~~~~~~-~----------~~e~iL~~~K~ 859 (870)
.....+..++..-..++..... . ..--+++|+|.
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKK 260 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEEC
T ss_pred ccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEec
Confidence 1356788888877777643311 0 12346788885
No 313
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.25 E-value=3.1e-06 Score=91.33 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=56.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcE-EEEcCcccCCCCCCceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAI-SAVMGTKRLQFPRNVFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~-~~v~dae~LPfpd~SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|++. +|+++|+++.++..+...+. +.+.+ +...+...+++++..||+|+++.
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~---~~~~v~vi~gD~l~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE---LYNNIEIIWGDALKVDLNKLDFNKVVANL 122 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH---HCSSEEEEESCTTTSCGGGSCCSEEEEEC
T ss_pred CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc---cCCCeEEEECchhhCCcccCCccEEEEeC
Confidence 45789999999999999999874 89999999999988875544 22333 44455677888888899999873
No 314
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=2.7e-07 Score=95.77 Aligned_cols=94 Identities=19% Similarity=0.280 Sum_probs=67.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccccCCC-CccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESFSTYP-RSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f~tyP-rtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++..|.+.+. .|+-+|-. ..+..+..+.-+-+++.-++.++ +| .+||+||+.++|.+..
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~-- 108 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-LPDKSVDGVISILAIHHFS-- 108 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC-SCTTCBSEEEEESCGGGCS--
T ss_pred CCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC-CCCCCEeEEEEcchHhhcc--
Confidence 46799999999999999998754 44444443 44444334433444554445544 54 8999999999887663
Q ss_pred cChhhHHHhhhhcccCCcEEEEec
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird 823 (870)
+...+|.++-|+|| ||++++.+
T Consensus 109 -~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 109 -HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp -SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred -CHHHHHHHHHHHhC-CcEEEEEE
Confidence 57789999999999 99887764
No 315
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.25 E-value=3.5e-08 Score=102.21 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=63.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCC-CceeEEEecccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPR-NVFDLVHCARCR 541 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd-~SFDlV~Ss~~a 541 (870)
.++.+|||||||+|.++..|+.. .|+|+|+++.++..++.... +.+.+.++. +...++++. ++| .|+++.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~-- 101 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQFQFPNKQRY-KIVGNI-- 101 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTTTCCCSSEE-EEEEEC--
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhcCcccCCCc-EEEEeC--
Confidence 35779999999999999988864 89999999998765542221 223344444 457777774 689 677762
Q ss_pred cccccC-------------hHHHH----HHHHhhcCCCcEEEEE
Q 002884 542 VPWHID-------------GGKLL----LELNRVLRPGGYFVWS 568 (870)
Q Consensus 542 lhw~~D-------------~~~vL----~Ei~RVLKPGG~Lv~S 568 (870)
+|... ...+| ..+.|+|+|||.|++.
T Consensus 102 -Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 102 -PYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp -CSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred -CccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 23221 12223 5577788888776654
No 316
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.25 E-value=3.9e-07 Score=89.79 Aligned_cols=135 Identities=14% Similarity=0.108 Sum_probs=80.4
Q ss_pred ccccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHh----hCc-cceec-cccccccC---CCCccchhhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYE----RGL-FGIYH-DWCESFST---YPRSYDLLHA 789 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~e----RGl-ig~~h-~wce~f~t---yPrtyDllHa 789 (870)
-..|||+|||.|.++.+|+.. +. +|+-+|.. ..+..+.+ .|+ +-+++ |+.+.+.. .+.+||+|.+
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGV---SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTE---EEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 356999999999999999876 32 33333332 33333222 232 33333 55553332 2379999988
Q ss_pred hcccccccC-------------CcC----------hhhHHHhhhhcccCCcE-EEEecChhhHHHHHHHHH--cCCceEE
Q 002884 790 DHLFSQLKN-------------RCK----------LVPVMAEVDRIVRPGGK-LIVRDEPSAVTEVENFLK--SLHWEIL 843 (870)
Q Consensus 790 ~~lfS~~~~-------------rc~----------~~~vl~EmDRILRPgG~-~iird~~~~~~~~~~~~~--~l~W~~~ 843 (870)
+.-|..... +.. +..+|.++-|+|||||+ +++.-.......+..++. ...|...
T Consensus 108 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 108 NPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceE
Confidence 644422110 011 16788999999999999 777766666788888888 7777543
Q ss_pred E--eecCCCceEEEEEeC
Q 002884 844 F--AFSKDQEGVLSAQKG 859 (870)
Q Consensus 844 ~--~~~~~~e~iL~~~K~ 859 (870)
. .+.....++++++|.
T Consensus 188 ~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 188 RKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp CEEECTTSCEEEEEEEEC
T ss_pred EEEEecCCCEEEEEEEEc
Confidence 2 244456889998874
No 317
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.25 E-value=2.9e-07 Score=94.14 Aligned_cols=94 Identities=18% Similarity=0.287 Sum_probs=69.3
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh--C---ccceeccccccccCCC-Cccchhhhhcccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER--G---LFGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR--G---lig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
-..|||+|||.|.++..|.+.+. +|+-+|.. ..+..+.++ + -+-+++.-.+.++ +| .+||+|++.++|.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~ 115 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-LPDESVHGVIVVHLWH 115 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-SCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-CCCCCeeEEEECCchh
Confidence 45799999999999999998864 45556654 677777665 1 1233332224433 54 7999999988877
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
... +...+|.++-|+|||||++++.
T Consensus 116 ~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 116 LVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 654 4678999999999999999986
No 318
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.24 E-value=4.3e-07 Score=89.51 Aligned_cols=136 Identities=14% Similarity=0.147 Sum_probs=86.8
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCC-CCccchhhhhc
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTY-PRSYDLLHADH 791 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~ty-PrtyDllHa~~ 791 (870)
..|||+|||.|.++.+|++. +- -.|+-+|.. ..+..+.++ |+ +-+++.-.+.+..+ +.+||+|.++.
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 36999999999999998775 21 145556654 555555444 54 44555434445534 58999998875
Q ss_pred cc-ccc-----cCCcChhhHHHhhhhcccCCcEEEEecC------hhhHHHHHHHHHcCC---ceEEEe-e---cCCCce
Q 002884 792 LF-SQL-----KNRCKLVPVMAEVDRIVRPGGKLIVRDE------PSAVTEVENFLKSLH---WEILFA-F---SKDQEG 852 (870)
Q Consensus 792 lf-S~~-----~~rc~~~~vl~EmDRILRPgG~~iird~------~~~~~~~~~~~~~l~---W~~~~~-~---~~~~e~ 852 (870)
.| ... ...-....+|.++-|+|||||++++..- ......+...+..+. |.+... + ...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp~ 181 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPI 181 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCCE
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCCe
Confidence 44 110 0001223599999999999999998852 224566677777665 777544 1 123567
Q ss_pred EEEEEeCC
Q 002884 853 VLSAQKGN 860 (870)
Q Consensus 853 iL~~~K~~ 860 (870)
+++.+|..
T Consensus 182 ~~~~~~~~ 189 (197)
T 3eey_A 182 LVCIEKIS 189 (197)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 77777753
No 319
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.24 E-value=3.5e-07 Score=90.34 Aligned_cols=132 Identities=14% Similarity=0.151 Sum_probs=83.0
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----ccceeccccccccCCC-Cccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----LFGIYHDWCESFSTYP-RSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h~wce~f~tyP-rtyDllHa~~lfS~~ 796 (870)
..|||+|||.|.++..|...+.- +|+-+|.. ..+..+.++. -+-+++.-...+ ++| .+||+|.+.++|...
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~-~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKL-DFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSC-CSCSSCEEEEEEESHHHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcC-CCCCCcccEEEECcchhhh
Confidence 46999999999999999887531 44555544 5555555542 233333222333 454 799999988887654
Q ss_pred cC------------CcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHH--HcCCceEEEeecCC--CceEEEEEe
Q 002884 797 KN------------RCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFL--KSLHWEILFAFSKD--QEGVLSAQK 858 (870)
Q Consensus 797 ~~------------rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~--~~l~W~~~~~~~~~--~e~iL~~~K 858 (870)
.. ...+..+|.++-|+|||||.+|+.+.... ...+.++ ....|......-.+ .-.+.+++|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHK 197 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEE
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEEEecCcceEEEEEEEe
Confidence 31 12456899999999999999999986442 2233444 33468765432222 223566665
No 320
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.23 E-value=1.7e-06 Score=90.00 Aligned_cols=69 Identities=13% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEE-cCcccCCCCC-CceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAV-MGTKRLQFPR-NVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v-~dae~LPfpd-~SFDlV~Ss 538 (870)
.++.+|||||||+|.++..|+.+ .|+|+|+++.++..++.... ..+...++ .+...+++++ ..| .|+++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLV---DHDNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTT---TCCSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhc---cCCCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 45789999999999999999874 89999999998877664332 12334444 4557788874 456 46665
No 321
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.22 E-value=2.2e-07 Score=95.86 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=69.2
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----c-cceec-cccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----L-FGIYH-DWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----l-ig~~h-~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.++.+|++... -+|+-++.+ ..+..+.+++ + +-+++ +|-+-...+| .+||.|..+-+++
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 3599999999999999988753 233334433 6677766553 2 22333 5655556776 7999998776666
Q ss_pred cccC--CcChhhHHHhhhhcccCCcEEEEec
Q 002884 795 QLKN--RCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 795 ~~~~--rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.+.. .-....+|-|+-|||||||.|+|-.
T Consensus 140 ~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 140 SEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred ccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 5433 2345678999999999999999863
No 322
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.22 E-value=2.1e-07 Score=96.30 Aligned_cols=95 Identities=21% Similarity=0.313 Sum_probs=67.6
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccCCC-Cccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFSTYP-RSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~tyP-rtyDllHa~~ 791 (870)
-..|||+|||.|.++..|+.. +. +|+-+|.. ..+..+.++ |+ +-+++.-.+.+ ++| .+||+|++.+
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATARDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-PFEDASFDAVWALE 137 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHSCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CSCTTCEEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-CCCCCCccEEEEec
Confidence 357999999999999999764 43 44444543 555555444 65 33343222332 354 7999999988
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+|.+..+ ...+|-++-|+|||||.++|.+
T Consensus 138 ~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHMPD---RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTSSC---HHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhCCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 8876643 5789999999999999999986
No 323
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.21 E-value=7.8e-07 Score=93.27 Aligned_cols=132 Identities=14% Similarity=0.235 Sum_probs=89.6
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----Cc--cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GL--FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+.. +- .+|+-+|.. ..+.++.++ |+ +-+++ |+.+.+. +.+||+|.++--|
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy 186 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPPY 186 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCCC
T ss_pred CEEEEecCCccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCCC
Confidence 46999999999999999743 32 145556654 556555544 54 44444 5655432 5789999887333
Q ss_pred ccc------------cCC----------cChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEE--EeecCC
Q 002884 794 SQL------------KNR----------CKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEIL--FAFSKD 849 (870)
Q Consensus 794 S~~------------~~r----------c~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~--~~~~~~ 849 (870)
... ..+ -.+..+|-++-|+|+|||++++.........+..+++...|... ..+...
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~g 266 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGD 266 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTTS
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 211 110 12357888999999999999998877777888888888878642 224556
Q ss_pred CceEEEEEe
Q 002884 850 QEGVLSAQK 858 (870)
Q Consensus 850 ~e~iL~~~K 858 (870)
.+++++++|
T Consensus 267 ~~r~~~~~~ 275 (276)
T 2b3t_A 267 NERVTLGRY 275 (276)
T ss_dssp SEEEEEEEC
T ss_pred CCcEEEEEE
Confidence 788988875
No 324
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.20 E-value=4.2e-07 Score=90.41 Aligned_cols=94 Identities=22% Similarity=0.358 Sum_probs=67.8
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-ccceeccccccccCCC-CccchhhhhcccccccC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-LFGIYHDWCESFSTYP-RSYDLLHADHLFSQLKN 798 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-lig~~h~wce~f~tyP-rtyDllHa~~lfS~~~~ 798 (870)
-.+|||+|||.|.++..| .. -+|+-+|.. ..+..+.++. -+.+++.-.+.++ +| .+||+|.+.++|.+..
T Consensus 37 ~~~vLdiG~G~G~~~~~l-~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-PY----PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALP-FPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-CC----SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCC-SCSSCEEEEEEESCTTTCS-
T ss_pred CCeEEEECCCCCHhHHhC-CC----CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCC-CCCCcEEEEEEcChhhhcC-
Confidence 357999999999999999 22 134455554 6666777663 2333443333433 44 7999999988887654
Q ss_pred CcChhhHHHhhhhcccCCcEEEEecC
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
+...+|.++-|+|||||.+||.+.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEec
Confidence 567899999999999999999863
No 325
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.20 E-value=6.2e-07 Score=89.18 Aligned_cols=113 Identities=13% Similarity=0.109 Sum_probs=78.7
Q ss_pred cccccccccchhHHhhhcCCC-eEEEEeccCCCC-CChhHHHhh----Cc--cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQ-VWVMNVVNVNSP-DTLPIIYER----GL--FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~-vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++..|+... - ..|+-+|.. ..+..+.++ |+ +-+++ |+.+.+. ...+||+|-+++.+
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPN--GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRVFIGGSG 118 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTT--SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEEEESCCT
T ss_pred CEEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEEEECCCC
Confidence 469999999999999998763 1 134445543 555555443 54 33333 3333332 22679999886655
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCceEEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~~~~ 844 (870)
. .+..+|-++-|+|||||.+++... ......+..+++...|++..
T Consensus 119 ~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 119 G------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp T------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEE
T ss_pred c------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeE
Confidence 3 567899999999999999999854 46678888889999986543
No 326
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.20 E-value=2.7e-07 Score=94.23 Aligned_cols=99 Identities=12% Similarity=0.157 Sum_probs=67.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----c-cceec-cccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----L-FGIYH-DWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----l-ig~~h-~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||+|.++.+|...+. -.|+-+|.. ..+..+.++. . +-+++ |+.+-..++| .+||+|.++ .|+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d-~~~ 138 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD-TYP 138 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC-CCC
T ss_pred CeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEEC-Ccc
Confidence 4699999999999999988754 256667765 7777776654 1 33444 3433334565 899999883 222
Q ss_pred c-cc--CCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 795 Q-LK--NRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 795 ~-~~--~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
. .. ..-.+..+|-|+-|+|||||.|++.+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 1 11 112234679999999999999998753
No 327
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.20 E-value=5.1e-07 Score=92.28 Aligned_cols=96 Identities=21% Similarity=0.198 Sum_probs=68.9
Q ss_pred ccccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhhC-ccceeccccccccCCCCccchhhhhccccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYERG-LFGIYHDWCESFSTYPRSYDLLHADHLFSQLK 797 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eRG-lig~~h~wce~f~tyPrtyDllHa~~lfS~~~ 797 (870)
-..|||+|||.|.++.+|.+. +. .|+-+|.. ..+..+.++. -+-+++.-.+.++ .+.+||+|++.++|....
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 109 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVP 109 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGST
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCC
Confidence 357999999999999999865 32 33334443 6677776662 1233333334444 458999999988887653
Q ss_pred CCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 798 NRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 798 ~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
+...+|.++-|+|||||+++|...
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 110 ---DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp ---THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 467899999999999999999853
No 328
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.20 E-value=3.4e-07 Score=94.97 Aligned_cols=95 Identities=15% Similarity=0.298 Sum_probs=67.4
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++..|... +. .|+-+|.. ..+..+.++ |+ +-++..-.+.++.-+.+||+|++..+|
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 56999999999999999876 33 34444443 555555544 54 333332223333334899999998888
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.... +...+|-++-|+|||||+++|.+
T Consensus 116 ~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 116 EHLQ---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 7665 35689999999999999999975
No 329
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.19 E-value=2e-06 Score=89.26 Aligned_cols=127 Identities=13% Similarity=0.147 Sum_probs=80.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc-cce-----ecccc-ccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL-FGI-----YHDWC-ESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl-ig~-----~h~wc-e~f~tyPrtyDllHa~~lfS 794 (870)
+.|||+|||+|+|+..|++.+.. .|+-+|.. .+|.....+.- ++. +...+ +.+.. .-||.+.++-+|+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CEEEEEccCCCHHHHHHHhcCCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 46999999999999999988642 56667754 77777555421 111 11112 22222 0123333333443
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEec-------------------Ch---hhHHHHHHHHHcCCceEEEee-c----
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRD-------------------EP---SAVTEVENFLKSLHWEILFAF-S---- 847 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird-------------------~~---~~~~~~~~~~~~l~W~~~~~~-~---- 847 (870)
. +..+|-|+-|+|||||+|++.- +. ..+..+..++....|++.... +
T Consensus 115 ~------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g 188 (232)
T 3opn_A 115 S------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKG 188 (232)
T ss_dssp C------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCB
T ss_pred h------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCC
Confidence 2 3679999999999999999861 10 235678888899999886542 1
Q ss_pred --CCCceEEEEEeC
Q 002884 848 --KDQEGVLSAQKG 859 (870)
Q Consensus 848 --~~~e~iL~~~K~ 859 (870)
.+-|.+|.++|.
T Consensus 189 ~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 189 GAGNVEFLVHLLKD 202 (232)
T ss_dssp TTTBCCEEEEEEES
T ss_pred CCCCHHHHHHHhhc
Confidence 235678888773
No 330
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.19 E-value=1.3e-06 Score=88.06 Aligned_cols=134 Identities=10% Similarity=0.026 Sum_probs=87.3
Q ss_pred ccccccccc-chhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc-cceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAV-YGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL-FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag-~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl-ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+||| .|.++.+|+... ..+|+-+|.. ..+..+.+ .|+ +-+++.-...+..+| .+||+|-++-.|.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 569999999 999999988762 1245555544 45554443 354 444443223455665 8999998875543
Q ss_pred ccc----------------CCcChhhHHHhhhhcccCCcEEEEec--ChhhHHHHHHHHHcCCceEEEeecCC---CceE
Q 002884 795 QLK----------------NRCKLVPVMAEVDRIVRPGGKLIVRD--EPSAVTEVENFLKSLHWEILFAFSKD---QEGV 853 (870)
Q Consensus 795 ~~~----------------~rc~~~~vl~EmDRILRPgG~~iird--~~~~~~~~~~~~~~l~W~~~~~~~~~---~e~i 853 (870)
... ....+..+|.++-|+|||||++++-- .......+...++...|.+....-.. --.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~ 214 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTRWRHS 214 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-CEEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCeEEEE
Confidence 221 11123678999999999999999853 34567888899999999886542222 2346
Q ss_pred EEEEe
Q 002884 854 LSAQK 858 (870)
Q Consensus 854 L~~~K 858 (870)
|+.+|
T Consensus 215 l~f~~ 219 (230)
T 3evz_A 215 LIFFK 219 (230)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 66655
No 331
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.18 E-value=8.1e-07 Score=89.43 Aligned_cols=129 Identities=16% Similarity=0.128 Sum_probs=80.6
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCC----Cccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYP----RSYD 785 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyP----rtyD 785 (870)
-.+|||+|||.|+++.+|+.. +. .|+-+|.. ..+..+.+ .|+ +-+++ |..+.+..++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 467999999999999999876 33 34455543 45544443 365 33444 3444333333 5799
Q ss_pred hhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecChhh------------HHHHHH----HHHcCCceEEEee---
Q 002884 786 LLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPSA------------VTEVEN----FLKSLHWEILFAF--- 846 (870)
Q Consensus 786 llHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~~------------~~~~~~----~~~~l~W~~~~~~--- 846 (870)
+|.+++... ....+|-++-|+|||||++|+.+.... ...++. +...-+|.+.+.-
T Consensus 136 ~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 209 (223)
T 3duw_A 136 FIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVG 209 (223)
T ss_dssp EEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred EEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccC
Confidence 998765432 345689999999999999998754321 123333 3334456655432
Q ss_pred cCCCceEEEEEeC
Q 002884 847 SKDQEGVLSAQKG 859 (870)
Q Consensus 847 ~~~~e~iL~~~K~ 859 (870)
.....+++++++.
T Consensus 210 ~~~~dG~~~~~~~ 222 (223)
T 3duw_A 210 SKGYDGFIMAVVK 222 (223)
T ss_dssp TTEEEEEEEEEEC
T ss_pred CCCCCeeEEEEEe
Confidence 2346788888863
No 332
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.17 E-value=1e-06 Score=88.38 Aligned_cols=120 Identities=14% Similarity=0.197 Sum_probs=80.2
Q ss_pred ccccccccccchhHHhhhcCCC-eEEEEeccCCCC-CChhHHHhh----Cc-------cceec-cccccccCCCCccchh
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQ-VWVMNVVNVNSP-DTLPIIYER----GL-------FGIYH-DWCESFSTYPRSYDLL 787 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~-vwvmNvvp~~~~-~tl~~i~eR----Gl-------ig~~h-~wce~f~tyPrtyDll 787 (870)
-..|||+|||.|.++.+|++.. . .+|+-+|.. ..+..+.++ |+ +-+++ |+ +....-+.+||+|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 106 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFF--EQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAA 106 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTC--SEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCC--CEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEE
Confidence 3579999999999999998763 1 144455543 566666554 22 23333 33 2222223799999
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecChhh----------------------HHHHH----HHHHcCCce
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPSA----------------------VTEVE----NFLKSLHWE 841 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~~----------------------~~~~~----~~~~~l~W~ 841 (870)
.+.++|..... -.+..+|-++-|+|||||.+|+.+.... ...++ .++.+-.++
T Consensus 107 ~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~ 185 (217)
T 3jwh_A 107 TVIEVIEHLDL-SRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYN 185 (217)
T ss_dssp EEESCGGGCCH-HHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEE
T ss_pred eeHHHHHcCCH-HHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCce
Confidence 99988887632 3456799999999999999998865422 23334 777777887
Q ss_pred EEEe
Q 002884 842 ILFA 845 (870)
Q Consensus 842 ~~~~ 845 (870)
+...
T Consensus 186 v~~~ 189 (217)
T 3jwh_A 186 VQFQ 189 (217)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7654
No 333
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.17 E-value=4.6e-07 Score=91.56 Aligned_cols=97 Identities=13% Similarity=0.209 Sum_probs=69.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc---cceeccccccccCCCCccchhhhhccccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL---FGIYHDWCESFSTYPRSYDLLHADHLFSQLK 797 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl---ig~~h~wce~f~tyPrtyDllHa~~lfS~~~ 797 (870)
-..|||+|||.|.++.+|...+.- +|+-+|.. ..+..+.++.- +-+++.-.+.++.-+.+||+|.+.++|....
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGAS--YVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCC--eEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 457999999999999999887541 34445544 66666666642 3334432333332248999999988877654
Q ss_pred CCcChhhHHHhhhhcccCCcEEEEec
Q 002884 798 NRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 798 ~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
++..+|.++-|+|||||.+||..
T Consensus 122 ---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 122 ---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 46789999999999999999975
No 334
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.16 E-value=2.8e-06 Score=81.52 Aligned_cols=108 Identities=8% Similarity=0.100 Sum_probs=79.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc--cceec-cccccccCCC-Cccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL--FGIYH-DWCESFSTYP-RSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h-~wce~f~tyP-rtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|..... +|+-+|.. ..+..+.++ |+ +-+++ |+.+ .+| .+||+|.++++
T Consensus 37 ~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIAKRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHHTTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECSC-
T ss_pred CEEEEeCCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECCc-
Confidence 4699999999999999988433 44555543 555555444 44 33333 4444 344 68999999776
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec-ChhhHHHHHHHHHcCCceEEEe
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD-EPSAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird-~~~~~~~~~~~~~~l~W~~~~~ 845 (870)
..+..+|.++-|+ |||.+++.+ .......+...++...|++...
T Consensus 110 ------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 4677899999999 999999987 5566788889999999988764
No 335
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.16 E-value=7.6e-07 Score=87.90 Aligned_cols=113 Identities=17% Similarity=0.198 Sum_probs=79.0
Q ss_pred ccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCC-Cccchhhhhcccccc
Q 002884 724 NVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYP-RSYDLLHADHLFSQL 796 (870)
Q Consensus 724 nvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyP-rtyDllHa~~lfS~~ 796 (870)
.|||+|||.|.++.+|...+. +|+-+|.. ..+..+.++ |+ +-+++.-.+.++ +| .+||+|.+. |.++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~--~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFD-IVADAWEGIVSI--FCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBS-CCTTTCSEEEEE--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcC-CCcCCccEEEEE--hhcC
Confidence 799999999999999999865 66667765 666666555 43 333333233333 44 799999883 3332
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecC-----------------hhhHHHHHHHHHcCCceEEEe
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDE-----------------PSAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~-----------------~~~~~~~~~~~~~l~W~~~~~ 845 (870)
..-.+..+|.++-|+|||||.+++.+. ......++.++. .|++...
T Consensus 106 -~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 106 -PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp -CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred -CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 223466899999999999999999842 122578888888 7887543
No 336
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.16 E-value=8.2e-06 Score=91.14 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCCCEEEEECCCCchhHHHHhc------------------------------------------CCEEEEeCChhhHHHH
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE------------------------------------------RDVLTMSFAPKDEHDA 503 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~------------------------------------------r~VtgVDiSp~ml~~A 503 (870)
.++..|||++||+|.++..++. ..|+|+|+++.|+..|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 4568999999999988755542 1399999999999998
Q ss_pred HHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEeccccccccc------ChHHHHHHHHhhcCC--CcEEEEE
Q 002884 504 QIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARCRVPWHI------DGGKLLLELNRVLRP--GGYFVWS 568 (870)
Q Consensus 504 ~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~~------D~~~vL~Ei~RVLKP--GG~Lv~S 568 (870)
+. .+...|+. ..+...+...++.+ .+||+|+|+. +|.. +...+..++.++||+ ||.+++.
T Consensus 280 r~-Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NP---PYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 280 KQ-NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANP---PYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HH-HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECC---CCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HH-HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECC---CCccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 84 55556664 34455566777765 4899999984 3432 224556666677766 8877765
No 337
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.16 E-value=1e-06 Score=88.75 Aligned_cols=112 Identities=21% Similarity=0.278 Sum_probs=81.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccccCCC-CccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESFSTYP-RSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f~tyP-rtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++..|... +-+|.. ..+..+.++++- ++..-.+.++ ++ .+||+|.+.++|....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~~-~~~~d~~~~~-~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGVF-VLKGTAENLP-LKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTCE-EEECBTTBCC-SCTTCEEEEEEESCGGGSS--
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCCE-EEEcccccCC-CCCCCeeEEEEcchHhhcc--
Confidence 357999999999999999887 233433 667777777543 3332233333 44 7999999988887653
Q ss_pred cChhhHHHhhhhcccCCcEEEEecCh------------------------hhHHHHHHHHHcCCceEEEe
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDEP------------------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~~------------------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
+...+|.++-|+|+|||++++.+.. .....+..++....+++...
T Consensus 117 -~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~ 185 (219)
T 1vlm_A 117 -DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKV 185 (219)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred -CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEE
Confidence 4578999999999999999998421 13577888888888887543
No 338
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.16 E-value=8.6e-07 Score=85.56 Aligned_cols=113 Identities=17% Similarity=0.243 Sum_probs=78.2
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCCCccchhhhhcc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyPrtyDllHa~~l 792 (870)
-.+|||+|||.|.++..|.... ..|+-+|.. ..+..+.+ .|+ +-+++ |+.+.+.. ..+||+|.+.+.
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~ 109 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVVGGS 109 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEESCC
T ss_pred CCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEECCc
Confidence 3579999999999999998876 345555543 45555444 343 33333 34332221 148999988766
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCceEEE
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~~~~ 844 (870)
+. .+..+|.++-|+|+|||.+++.+. ......+..+++...|++..
T Consensus 110 ~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 110 GG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp TT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred hH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 53 357899999999999999999864 45567788888887775543
No 339
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.16 E-value=7.3e-07 Score=88.40 Aligned_cols=124 Identities=9% Similarity=0.083 Sum_probs=81.0
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCc--cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|... +- .+|+-+|.. ..+..+.+ .|+ +-+++ |+.+ +. -+.+||+|.+.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS-
T ss_pred CeEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc-
Confidence 46999999999999998754 21 134444443 44444443 355 33444 3332 22 1378999988543
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEEEe------ecCCCceEEEEEeC
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILFA------FSKDQEGVLSAQKG 859 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~~------~~~~~e~iL~~~K~ 859 (870)
..+..+|.++-|+|+|||++++.........++.+++ .|+.... +......+++++|.
T Consensus 142 ------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3467899999999999999999976666677777766 7876431 11234567777763
No 340
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.16 E-value=1.7e-07 Score=103.83 Aligned_cols=117 Identities=12% Similarity=0.196 Sum_probs=91.0
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccc----cccccCCC-Cccchhhhhccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDW----CESFSTYP-RSYDLLHADHLFSQ 795 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~w----ce~f~tyP-rtyDllHa~~lfS~ 795 (870)
-..|||+|||.|.++.+|.+.+. +|+-+|-. +.+..+.++|+-.....+ .+.+ +++ .+||+|.+.++|.+
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l-~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDV-RRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHH-HHHHCCEEEEEEESCGGG
T ss_pred CCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhc-ccCCCCEEEEEECChHHh
Confidence 35799999999999999998876 66777766 888899999765443222 2222 343 89999999999988
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEecCh--------------------hhHHHHHHHHHcCCceEEEe
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iird~~--------------------~~~~~~~~~~~~l~W~~~~~ 845 (870)
.. ++..+|-++-|+|||||+++|..+. .....++.++.+..+++...
T Consensus 184 ~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 184 IP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp CT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred cC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 75 5788999999999999999998532 11468888999988887544
No 341
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.14 E-value=1.7e-05 Score=85.83 Aligned_cols=104 Identities=7% Similarity=-0.030 Sum_probs=69.1
Q ss_pred CCCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCC---CceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPR---NVFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd---~SFDlV~ 536 (870)
.++.+|||+|||+|..+..|+. ..|+++|+++.++..++. .+...|+.++.++. +...++... ..||.|+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~-n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMAT-LLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 4678999999999998887765 279999999999888774 44556766554444 445554322 5799999
Q ss_pred ec-----ccccc------cc-----cCh-------HHHHHHHHhhcCCCcEEEEEECC
Q 002884 537 CA-----RCRVP------WH-----IDG-------GKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 537 Ss-----~~alh------w~-----~D~-------~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
+. ...+. |. .+. ..+|..+.++|+ ||+|++++..
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 62 11111 11 111 245777778887 9999998543
No 342
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.12 E-value=5.6e-06 Score=92.18 Aligned_cols=98 Identities=17% Similarity=0.118 Sum_probs=69.6
Q ss_pred CCCCEEEEECCCCchhHHHHhc------------------------------------------CCEEEEeCChhhHHHH
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE------------------------------------------RDVLTMSFAPKDEHDA 503 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~------------------------------------------r~VtgVDiSp~ml~~A 503 (870)
.++.+|||+|||+|.++..++. ..|+|+|+++.++..|
T Consensus 194 ~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~A 273 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIA 273 (385)
T ss_dssp CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHH
Confidence 4578999999999988766542 2599999999999998
Q ss_pred HHHHHHHcCCC-cE-EEEcCcccCCCCCCceeEEEeccccccccc------ChHHHHHHHHhhcCC--CcEEEEE
Q 002884 504 QIQFALERGIP-AI-SAVMGTKRLQFPRNVFDLVHCARCRVPWHI------DGGKLLLELNRVLRP--GGYFVWS 568 (870)
Q Consensus 504 ~vq~A~ergl~-~~-~~v~dae~LPfpd~SFDlV~Ss~~alhw~~------D~~~vL~Ei~RVLKP--GG~Lv~S 568 (870)
+. .+...|+. .+ +...+...++.+ ..||+|+|+. +|.. +...++.++.++||+ ||.+++.
T Consensus 274 r~-Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NP---Pyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 274 RE-NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNP---PYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLI 343 (385)
T ss_dssp HH-HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECC---CCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEE
T ss_pred HH-HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECC---CCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 84 45555664 34 444455666654 5899999985 3432 234567777778877 7777765
No 343
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.12 E-value=1.7e-06 Score=91.01 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=76.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh------------------Cccc---------------
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER------------------GLFG--------------- 768 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR------------------Glig--------------- 768 (870)
..|||+|||.|.++..+...+.. .|+-+|-. .+|..+.++ .+.|
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACSHFE--DITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGGGCS--EEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhccCCC--eEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 56999999999965544433221 45555544 555544331 0111
Q ss_pred ---eec-ccccccc----CCC-CccchhhhhcccccccCC-cChhhHHHhhhhcccCCcEEEEecC--------------
Q 002884 769 ---IYH-DWCESFS----TYP-RSYDLLHADHLFSQLKNR-CKLVPVMAEVDRIVRPGGKLIVRDE-------------- 824 (870)
Q Consensus 769 ---~~h-~wce~f~----tyP-rtyDllHa~~lfS~~~~r-c~~~~vl~EmDRILRPgG~~iird~-------------- 824 (870)
+++ |..+..+ .+| .+||+|.+..+|...... -++..+|-||-|+|||||+|+|.+.
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 222 4443222 243 679999998887764332 2567899999999999999999731
Q ss_pred --hhhHHHHHHHHHcCCceEEE
Q 002884 825 --PSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 825 --~~~~~~~~~~~~~l~W~~~~ 844 (870)
......+..++..-.+++..
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEE
Confidence 12367888888888887653
No 344
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.12 E-value=7.6e-07 Score=92.15 Aligned_cols=98 Identities=19% Similarity=0.312 Sum_probs=71.1
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceeccccccccCCC-CccchhhhhcccccccCC
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYHDWCESFSTYP-RSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h~wce~f~tyP-rtyDllHa~~lfS~~~~r 799 (870)
-..|||+|||.|.++..|.+.+. +|+-+|.. ..+..+.++..--++..-.+.++ +| .+||+|.+.+++-.+..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~~~- 129 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLSYVE- 129 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCSCEEECCTTSCC-SCTTCEEEEEECSSHHHHCS-
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCC-CCCCCEEEEEEcchhhhccc-
Confidence 45799999999999999998864 55666654 77777777764223332233333 54 79999998765544432
Q ss_pred cChhhHHHhhhhcccCCcEEEEecCh
Q 002884 800 CKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 800 c~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
++..+|.++-|+|||||.+++....
T Consensus 130 -~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 130 -NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred -cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2778999999999999999998543
No 345
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.11 E-value=3.6e-06 Score=87.24 Aligned_cols=130 Identities=13% Similarity=0.099 Sum_probs=82.9
Q ss_pred cccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Ccc---ceec-cccccccCCC--Cccch
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GLF---GIYH-DWCESFSTYP--RSYDL 786 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Gli---g~~h-~wce~f~tyP--rtyDl 786 (870)
.-++|||+|||.|.++.+|+.. +. .|+-+|.. ..+..+.++ |+- -+++ |..+.+...+ .+||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 3468999999999999999876 32 34445543 555555544 653 3333 4444444444 39999
Q ss_pred hhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecChhh------------HHHHHH----HHHcCCceEEEee---c
Q 002884 787 LHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPSA------------VTEVEN----FLKSLHWEILFAF---S 847 (870)
Q Consensus 787 lHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~~------------~~~~~~----~~~~l~W~~~~~~---~ 847 (870)
|.+++-. -....+|-++-|+|||||++|+.+.... ...++. +...-+|...+.. .
T Consensus 140 V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~ 213 (248)
T 3tfw_A 140 IFIDADK------PNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGT 213 (248)
T ss_dssp EEECSCG------GGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECST
T ss_pred EEECCch------HHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCC
Confidence 9875521 2345689999999999999998754321 223333 3444566665431 1
Q ss_pred CCCceEEEEEeC
Q 002884 848 KDQEGVLSAQKG 859 (870)
Q Consensus 848 ~~~e~iL~~~K~ 859 (870)
....++++++|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 345889999985
No 346
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.11 E-value=4.8e-07 Score=95.57 Aligned_cols=95 Identities=17% Similarity=0.269 Sum_probs=67.1
Q ss_pred ccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----C-----ccceeccccccccCCCCccchhhh-hcc
Q 002884 724 NVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----G-----LFGIYHDWCESFSTYPRSYDLLHA-DHL 792 (870)
Q Consensus 724 nvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----G-----lig~~h~wce~f~tyPrtyDllHa-~~l 792 (870)
.|||+|||.|.++.+|.+.+. +|+-+|.. ..+..+.++ | -+-++..-.+.++ ++.+||+|.+ ..+
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFA-LDKRFGTVVISSGS 160 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCC-CSCCEEEEEECHHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCC-cCCCcCEEEECCcc
Confidence 699999999999999999864 55666654 666666655 2 2444443333333 3799998875 344
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+... ..-.+..+|-++-|+|||||.|||..
T Consensus 161 ~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 161 INEL-DEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HTTS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccC-CHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4432 22335689999999999999999984
No 347
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.10 E-value=1.3e-06 Score=87.94 Aligned_cols=127 Identities=18% Similarity=0.230 Sum_probs=80.1
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCCC-----Ccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTYP-----RSY 784 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~tyP-----rty 784 (870)
-.+|||+|||.|.++.+|+.. +. .|+-+|.. ..+..+.++ |+ +-+++ |..+.+..++ .+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 457999999999999999875 32 34444443 445444433 55 33444 4444444444 789
Q ss_pred chhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecChh------------hHHHHHHHH----HcCCceEEEeecC
Q 002884 785 DLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS------------AVTEVENFL----KSLHWEILFAFSK 848 (870)
Q Consensus 785 DllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~------------~~~~~~~~~----~~l~W~~~~~~~~ 848 (870)
|+|.+++. .-....+|-++-|+|||||++|+.|... ....++.+. ..-+|...+. .
T Consensus 142 D~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p 213 (225)
T 3tr6_A 142 DLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILI--P 213 (225)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEE--C
T ss_pred cEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEE--E
Confidence 99986543 2235568899999999999999986431 122333333 3445665543 2
Q ss_pred CCceEEEEEeC
Q 002884 849 DQEGVLSAQKG 859 (870)
Q Consensus 849 ~~e~iL~~~K~ 859 (870)
-..++++++|.
T Consensus 214 ~~dG~~~~~k~ 224 (225)
T 3tr6_A 214 IGDGLTLARKK 224 (225)
T ss_dssp STTCEEEEEEC
T ss_pred cCCccEEEEEC
Confidence 35678888884
No 348
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.10 E-value=1.5e-06 Score=93.35 Aligned_cols=134 Identities=12% Similarity=0.193 Sum_probs=88.7
Q ss_pred cccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHh----hCc---ccee-ccccccccCCCCccch
Q 002884 717 INWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYE----RGL---FGIY-HDWCESFSTYPRSYDL 786 (870)
Q Consensus 717 i~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~e----RGl---ig~~-h~wce~f~tyPrtyDl 786 (870)
..|.....|||+|||.|.++.+|.+. ++-+. -+|.+..+..+.+ .|+ +-+. +|.. .++|..||+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~p~~~D~ 238 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGT---VLDLQGPASAAHRRFLDTGLSGRAQVVVGSFF---DPLPAGAGG 238 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHHHHHHHHHHTTCTTTEEEEECCTT---SCCCCSCSE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEE---EecCHHHHHHHHHhhhhcCcCcCeEEecCCCC---CCCCCCCcE
Confidence 45677789999999999999999763 33222 1233444544443 355 3332 2443 456668999
Q ss_pred hhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh----------------------hhHHHHHHHHHcCCceEEE
Q 002884 787 LHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP----------------------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 787 lHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~----------------------~~~~~~~~~~~~l~W~~~~ 844 (870)
|.+.+++-.+.+. ....+|-++-|+|||||+++|.|.. .....++.+++.-.++...
T Consensus 239 v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 239 YVLSAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEEehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 9998888765431 2457999999999999999998642 1145677777777787654
Q ss_pred ee-cCCCceEEEEEe
Q 002884 845 AF-SKDQEGVLSAQK 858 (870)
Q Consensus 845 ~~-~~~~e~iL~~~K 858 (870)
.. ... ..|+.|+|
T Consensus 318 ~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 318 AHPISY-VSIVEMTA 331 (332)
T ss_dssp EEECSS-SEEEEEEE
T ss_pred EEECCC-cEEEEEee
Confidence 32 223 66777765
No 349
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.10 E-value=2.9e-07 Score=92.57 Aligned_cols=118 Identities=11% Similarity=0.118 Sum_probs=79.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh-Cc--------------cceeccccccccCCC----C
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER-GL--------------FGIYHDWCESFSTYP----R 782 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR-Gl--------------ig~~h~wce~f~tyP----r 782 (870)
..|||+|||.|.++..|++++. .|+-+|.. ..|..+.+| ++ ..-+.-.|..+..+| .
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 4599999999999999998875 67777765 788888776 21 011111233333333 6
Q ss_pred ccchhhhhcccccccCCcChhhHHHhhhhcccCCcE-EEEe-cCh----------hhHHHHHHHHHcCCceEEEe
Q 002884 783 SYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGK-LIVR-DEP----------SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 783 tyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~-~iir-d~~----------~~~~~~~~~~~~l~W~~~~~ 845 (870)
+||+|-+.++|..... .....+|-||-|+|||||. +++. +-. ...+.++.++.. .|++...
T Consensus 101 ~fD~v~~~~~l~~l~~-~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPA-DMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp SEEEEEEESCGGGSCH-HHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CEEEEEECcchhhCCH-HHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 8999988777765432 3445689999999999998 3333 210 125778888887 7877543
No 350
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.10 E-value=1.7e-06 Score=90.32 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=87.9
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHH----hhCc--cceeccccccccC---CCCccchhhhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIY----ERGL--FGIYHDWCESFST---YPRSYDLLHAD 790 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~----eRGl--ig~~h~wce~f~t---yPrtyDllHa~ 790 (870)
-..|||+|||.|.+|..|+.. +- ..|+-+|.. ..+.++. .-|+ +-++|.-.+.+.. ++.+||+|-+.
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPE--LELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 357999999999998887643 21 133444543 4444433 3366 4555644454443 34799999874
Q ss_pred cccccccCCcChhhHHHhhhhcccCCcEEEEecC---hhhHHHHHHHHHcCCceEEEe--e----cCCCceEEEEEeCCC
Q 002884 791 HLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE---PSAVTEVENFLKSLHWEILFA--F----SKDQEGVLSAQKGNW 861 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~---~~~~~~~~~~~~~l~W~~~~~--~----~~~~e~iL~~~K~~w 861 (870)
.+ ..+..++-++-|+|||||.|++-.. .+.+..+...++.+.|.+... . .+..-.+++.+|.-.
T Consensus 159 a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k~~~ 231 (249)
T 3g89_A 159 AV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAP 231 (249)
T ss_dssp SS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEECSC
T ss_pred Cc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEeCCC
Confidence 33 3567899999999999999987643 455666777788888887533 1 112335677787666
Q ss_pred CCCCC
Q 002884 862 QPDTY 866 (870)
Q Consensus 862 ~~~~~ 866 (870)
+|...
T Consensus 232 t~~~y 236 (249)
T 3g89_A 232 TPPAY 236 (249)
T ss_dssp CCTTC
T ss_pred CCCCC
Confidence 66543
No 351
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.09 E-value=3.6e-06 Score=93.26 Aligned_cols=116 Identities=15% Similarity=0.142 Sum_probs=72.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcC--C--C---cEEE-EcCccc-CC-C--CCCc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERG--I--P---AISA-VMGTKR-LQ-F--PRNV 531 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~erg--l--~---~~~~-v~dae~-LP-f--pd~S 531 (870)
.+.+||+||||+|.+++.++++ +|+++|+++.++..|+..+....+ + + .+.+ +.|+.. +. + ..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 5789999999999999988775 799999999988777644321110 1 1 2333 344322 22 1 3578
Q ss_pred eeEEEeccccccccc-----ChHHHHHHH----HhhcCCCcEEEEEECCCcCchhHHHHHHH
Q 002884 532 FDLVHCARCRVPWHI-----DGGKLLLEL----NRVLRPGGYFVWSATPVYQKLGEDVEIWN 584 (870)
Q Consensus 532 FDlV~Ss~~alhw~~-----D~~~vL~Ei----~RVLKPGG~Lv~S~~p~~~tL~El~~~w~ 584 (870)
||+|++....+++.. ....++..+ .++|+|||+|++.... ..+.+....+.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s--~~~~e~~~~~~ 327 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC--VNLTEALSLYE 327 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE--TTCHHHHHHHH
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC--cchHHHHHHHH
Confidence 999998642112221 114556666 8999999999986422 12345444444
No 352
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.09 E-value=7.1e-07 Score=95.11 Aligned_cols=115 Identities=10% Similarity=-0.030 Sum_probs=80.0
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCcc---ceeccccccccCCC-Cccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGLF---GIYHDWCESFSTYP-RSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGli---g~~h~wce~f~tyP-rtyDllHa~~ 791 (870)
-..|||+|||.|.++..|++. +. .|+-+|.. ..+..+.+ .|+- -+++.-.+.+ ++| .+||+|.+.+
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGS---RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-PFDKGAVTASWNNE 193 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCTTCEEEEEEES
T ss_pred CCEEEEecCCCCHHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-CCCCCCEeEEEECC
Confidence 457999999999999999876 43 34445543 55555544 4543 3344222333 355 8999999988
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecCh----h-------------------hHHHHHHHHHcCCceEEE
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP----S-------------------AVTEVENFLKSLHWEILF 844 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~----~-------------------~~~~~~~~~~~l~W~~~~ 844 (870)
+|-.. +...+|.++-|+|||||.+++.+.. . ....+..+++.-.+++..
T Consensus 194 ~l~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~ 265 (312)
T 3vc1_A 194 STMYV----DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHT 265 (312)
T ss_dssp CGGGS----CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEE
T ss_pred chhhC----CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEE
Confidence 88765 2788999999999999999988521 0 245667777777777643
No 353
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.09 E-value=1e-06 Score=89.49 Aligned_cols=109 Identities=14% Similarity=0.195 Sum_probs=77.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc-cceec-cccccccCC-CCccchhhhhcccccccC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL-FGIYH-DWCESFSTY-PRSYDLLHADHLFSQLKN 798 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl-ig~~h-~wce~f~ty-PrtyDllHa~~lfS~~~~ 798 (870)
..|||+|||.|.++.+|...+. .|+-+|.. ..+..+.++.- +-+++ |+.+.++.- +.+||+|.+.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 4699999999999999998864 56666654 77777777732 33333 565554422 4799999884
Q ss_pred CcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEE
Q 002884 799 RCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 799 rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~ 843 (870)
-....+|.++-|+|||||.++..........+...+....+...
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 24667999999999999999954333344566666776666543
No 354
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.09 E-value=1.8e-06 Score=93.19 Aligned_cols=138 Identities=14% Similarity=0.153 Sum_probs=91.2
Q ss_pred ccccc-ccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHh----hCccc---e-eccccccccCCCCccc
Q 002884 717 INWSN-VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYE----RGLFG---I-YHDWCESFSTYPRSYD 785 (870)
Q Consensus 717 i~W~~-~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~e----RGlig---~-~h~wce~f~tyPrtyD 785 (870)
+.|.. .+.|||+|||.|.++.+|.+. ++-+. -+|.+..+..+.+ .|+-. + .+|..+.....|..||
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D 250 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQ---IWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAAD 250 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEE---EEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEE---EEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCcc
Confidence 34555 788999999999999999764 33222 2233445554443 35432 2 2344443222578899
Q ss_pred hhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh---------------------------hhHHHHHHHHHcC
Q 002884 786 LLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP---------------------------SAVTEVENFLKSL 838 (870)
Q Consensus 786 llHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~---------------------------~~~~~~~~~~~~l 838 (870)
+|.+.++|..+.. -....+|-++-|+|||||.++|.|.. .....++.++..-
T Consensus 251 ~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (352)
T 3mcz_A 251 VVMLNDCLHYFDA-REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDA 329 (352)
T ss_dssp EEEEESCGGGSCH-HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHT
T ss_pred EEEEecccccCCH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHC
Confidence 9999888876643 12457999999999999999997521 1134567777777
Q ss_pred CceEEEeecCCCceEEEEEeC
Q 002884 839 HWEILFAFSKDQEGVLSAQKG 859 (870)
Q Consensus 839 ~W~~~~~~~~~~e~iL~~~K~ 859 (870)
.+++... ......+++++|+
T Consensus 330 Gf~~~~~-~~g~~~l~~a~kp 349 (352)
T 3mcz_A 330 GLAVGER-SIGRYTLLIGQRS 349 (352)
T ss_dssp TCEEEEE-EETTEEEEEEECC
T ss_pred CCceeee-ccCceEEEEEecC
Confidence 8877642 3345778999985
No 355
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.09 E-value=1.7e-05 Score=88.47 Aligned_cols=99 Identities=15% Similarity=0.096 Sum_probs=70.7
Q ss_pred CCCCEEEEECCCCchhHHHHhc------------------------------------------CCEEEEeCChhhHHHH
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE------------------------------------------RDVLTMSFAPKDEHDA 503 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~------------------------------------------r~VtgVDiSp~ml~~A 503 (870)
.++..|||.+||+|.++...+. ..|+|+|+++.|+..|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 4578999999999988765542 1399999999999998
Q ss_pred HHHHHHHcCCC--cEEEEcCcccCCCCCCceeEEEecccccccc------cChHHHHHHHHhhcCC--CcEEEEEE
Q 002884 504 QIQFALERGIP--AISAVMGTKRLQFPRNVFDLVHCARCRVPWH------IDGGKLLLELNRVLRP--GGYFVWSA 569 (870)
Q Consensus 504 ~vq~A~ergl~--~~~~v~dae~LPfpd~SFDlV~Ss~~alhw~------~D~~~vL~Ei~RVLKP--GG~Lv~S~ 569 (870)
+. .+...|+. ..+...+...++.+. .||+|+|+. +|. .+...++.++.++||+ ||.+++.+
T Consensus 273 r~-Na~~~gl~~~I~~~~~D~~~l~~~~-~fD~Iv~NP---PYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RK-NAREVGLEDVVKLKQMRLQDFKTNK-INGVLISNP---PYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HH-HHHHTTCTTTEEEEECCGGGCCCCC-CSCEEEECC---CCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HH-HHHHcCCCCceEEEECChHHCCccC-CcCEEEECC---chhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 84 55566765 334445567777654 899999984 343 2235667777778877 88877763
No 356
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.09 E-value=1.1e-05 Score=85.85 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=55.2
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCC-ceeEEEeccccc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRN-VFDLVHCARCRV 542 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~-SFDlV~Ss~~al 542 (870)
.++ +|||||||+|.++..|+++ .|+++|+++.|+..++.... +....+...|...+++++. .||.|+++ +
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~~~~~~~~iv~N---l 118 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWEEVPQGSLLVAN---L 118 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGGGSCTTEEEEEE---E
T ss_pred CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChhhccCccEEEec---C
Confidence 356 9999999999999999876 89999999999887764432 2223444455677777643 68999997 4
Q ss_pred ccccC
Q 002884 543 PWHID 547 (870)
Q Consensus 543 hw~~D 547 (870)
+|...
T Consensus 119 Py~is 123 (271)
T 3fut_A 119 PYHIA 123 (271)
T ss_dssp CSSCC
T ss_pred ccccc
Confidence 55543
No 357
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.08 E-value=9.7e-06 Score=85.50 Aligned_cols=70 Identities=11% Similarity=0.123 Sum_probs=51.5
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCC----CceeEEEec
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPR----NVFDLVHCA 538 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd----~SFDlV~Ss 538 (870)
.++.+|||||||+|.++..|+++ +|+++|+++.|+..++..... .....+...+...+++++ ..|| |+++
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 45789999999999999999886 899999999998887644332 222334445566776643 5688 6666
No 358
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.08 E-value=4.8e-07 Score=95.52 Aligned_cols=96 Identities=11% Similarity=0.255 Sum_probs=65.4
Q ss_pred cccccccccchhHHhh----hcC--CCeEEEEeccCCCC-CChhHHHhh-----Cccceeccc----ccccc-----CC-
Q 002884 723 RNVMDMRAVYGGFAAA----LKD--LQVWVMNVVNVNSP-DTLPIIYER-----GLFGIYHDW----CESFS-----TY- 780 (870)
Q Consensus 723 RnvmDm~ag~Ggfaaa----L~~--~~vwvmNvvp~~~~-~tl~~i~eR-----Glig~~h~w----ce~f~-----ty- 780 (870)
..|||+|||.|.++.. |.. .++ ...++-+|.. .+|..+.+| |+-.+--.| .+.+. +|
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 3699999999987643 332 234 2244666755 777777765 443221122 22333 24
Q ss_pred CCccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 781 PRSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 781 PrtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
+.+||+|+|..+|-... ++...|-||-|+|||||+|+|.
T Consensus 133 ~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEE
Confidence 48999999988887665 4678999999999999999986
No 359
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.07 E-value=4.9e-07 Score=94.19 Aligned_cols=101 Identities=15% Similarity=0.140 Sum_probs=68.7
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceeccccccccC-CCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYHDWCESFST-YPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h~wce~f~t-yPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|...+. .+|+-+|.. ..+..+.++ |+ +-+++.-++.++. -+.+||+|.+.++|
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 5699999999999999887653 245555544 555555554 33 3444433333322 24799999998777
Q ss_pred ccc-cCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 794 SQL-KNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 794 S~~-~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
... .+.-.+..+|.++-|+|||||++||..+.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 431 22234567999999999999999998643
No 360
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.07 E-value=6.8e-07 Score=88.38 Aligned_cols=96 Identities=11% Similarity=0.144 Sum_probs=65.6
Q ss_pred cccccccccchhH-HhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGF-AAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~Ggf-aaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.+ .+.|...+. +|+-+|.. ..+..+.++ |. +-+++.-.+.+ ++| .+||+|.+.+++.
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKL-PFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSC-CSCTTCEEEEEECSCGG
T ss_pred CEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhC-CCCCCceeEEEEcChHH
Confidence 5799999999998 455555554 45556654 555555443 32 33344323333 354 8999999988776
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+.. .-.+..+|-++-|+|||||++++.+
T Consensus 101 ~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 101 HMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 552 2356789999999999999999985
No 361
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.07 E-value=7.6e-07 Score=98.28 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=82.8
Q ss_pred cccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh---------C-----ccceecccccccc-----C
Q 002884 723 RNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER---------G-----LFGIYHDWCESFS-----T 779 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR---------G-----lig~~h~wce~f~-----t 779 (870)
..|||+|||.|.++..|++. +. .|+-+|.. ..+..+.++ | -+-+++.-.+.+. +
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46999999999999888764 22 44445544 667776665 5 2344443333331 5
Q ss_pred CC-CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh-----------------------hhHHHHHHHH
Q 002884 780 YP-RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-----------------------SAVTEVENFL 835 (870)
Q Consensus 780 yP-rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-----------------------~~~~~~~~~~ 835 (870)
+| .+||+|++.++|.... +...+|.++-|+|||||+|+|.+.. .....+..++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHH
Confidence 55 7999999999888765 3678999999999999999998521 2237788888
Q ss_pred HcCCceEE
Q 002884 836 KSLHWEIL 843 (870)
Q Consensus 836 ~~l~W~~~ 843 (870)
..-.++..
T Consensus 239 ~~aGF~~v 246 (383)
T 4fsd_A 239 AEAGFRDV 246 (383)
T ss_dssp HHTTCCCE
T ss_pred HHCCCceE
Confidence 88888644
No 362
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.07 E-value=3.8e-06 Score=85.96 Aligned_cols=129 Identities=15% Similarity=0.271 Sum_probs=80.4
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc---cceec-ccccccc-CCCCccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFS-TYPRSYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~-tyPrtyDllHa~~ 791 (870)
-++|||+|||.|.++.+|+...- ...|+-+|.. ..+..+.+ .|+ +-+++ |..+.+. ..+.+||+|.+++
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 46799999999999999988310 1244555543 44444433 354 44554 4444444 4468999998753
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecCh-----------------hhHHHHHHHH----HcCCceEEEeecCCC
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-----------------SAVTEVENFL----KSLHWEILFAFSKDQ 850 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-----------------~~~~~~~~~~----~~l~W~~~~~~~~~~ 850 (870)
- .-....+|-++-|+|||||++|+.+.. .....++.+. ..-+|...+. .-.
T Consensus 151 ~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~~ 222 (232)
T 3ntv_A 151 A------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFL--NID 222 (232)
T ss_dssp T------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEE--CST
T ss_pred c------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEE--EcC
Confidence 2 224567899999999999999994311 1122333333 3445665443 235
Q ss_pred ceEEEEEeC
Q 002884 851 EGVLSAQKG 859 (870)
Q Consensus 851 e~iL~~~K~ 859 (870)
.++++++|+
T Consensus 223 dG~~i~~k~ 231 (232)
T 3ntv_A 223 DGLAISIKG 231 (232)
T ss_dssp TCEEEEEEC
T ss_pred CceEEEEEC
Confidence 788988884
No 363
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.07 E-value=3.6e-06 Score=93.24 Aligned_cols=100 Identities=17% Similarity=0.309 Sum_probs=67.4
Q ss_pred CCEEEEECCCCchhHHHHhc--------------------CCEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc---Cc-c
Q 002884 468 TRVSLDVGCGVASFGGYLFE--------------------RDVLTMSFAPKDEHDAQIQFALERGIPAISAVM---GT-K 523 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La~--------------------r~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~---da-e 523 (870)
.-+|+|+||++|..+..+.. -.|...|+..+|..........-..-....++. +. .
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 46799999999965543321 167888999998876553221100000123333 22 3
Q ss_pred cCCCCCCceeEEEecccccccccChH---------------------------------HHHHHHHhhcCCCcEEEEE
Q 002884 524 RLQFPRNVFDLVHCARCRVPWHIDGG---------------------------------KLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 524 ~LPfpd~SFDlV~Ss~~alhw~~D~~---------------------------------~vL~Ei~RVLKPGG~Lv~S 568 (870)
...||+++||+|+|+. ++||..+.+ .+|+-..+.|+|||.|+++
T Consensus 132 ~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 4578999999999995 599985422 2488889999999999998
No 364
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.07 E-value=1.1e-06 Score=96.22 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=68.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHH----HhhCc---cceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPII----YERGL---FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i----~eRGl---ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.++.+|++.+. ..|+-+|....+..+ ...|+ +-+++.-.+.+ ++| .+||+|.+..++.
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccccc
Confidence 5699999999999999998854 133334433344443 34466 45555444444 566 8999999977666
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
.+...-.+..+|.+++|+|||||++|+.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 5544456778999999999999999755
No 365
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.06 E-value=6.7e-06 Score=80.28 Aligned_cols=125 Identities=17% Similarity=0.096 Sum_probs=85.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceec-cccccccCCC-CccchhhhhcccccccCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYH-DWCESFSTYP-RSYDLLHADHLFSQLKNR 799 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h-~wce~f~tyP-rtyDllHa~~lfS~~~~r 799 (870)
..|||+|||.|.++.+|+... +|+-+|.. ..+.. ..+ +-+++ |+.+ .++ .+||+|-++..|-.....
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~-~~~~~~d~~~---~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRG-GNLVRADLLC---SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSS-SCEEECSTTT---TBCGGGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccC-CeEEECChhh---hcccCCCCEEEECCCCccCCcc
Confidence 369999999999999999987 67777765 55444 222 33333 4444 344 899999997666532221
Q ss_pred ------cChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCceEEEee--cCCCceEEEEEe
Q 002884 800 ------CKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWEILFAF--SKDQEGVLSAQK 858 (870)
Q Consensus 800 ------c~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~~~~~~--~~~~e~iL~~~K 858 (870)
.....++.++-|.| |||.+++... ......+..+++...|+..... ....+++++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~~ 161 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKG 161 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEEE
Confidence 22345788888888 9999999753 4557889999999999886542 334566665543
No 366
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.06 E-value=1.6e-06 Score=91.62 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=79.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cccc---eeccccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLFG---IYHDWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Glig---~~h~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||+|+|+.+|+..+-- .|+-+|.. ..+..+.++ |+-. +++.-+..+.. +.+||+|.++..+
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV- 202 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS-
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCch-
Confidence 46999999999999999876431 35555654 555554443 6643 34433333333 6899999875442
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh-------hhHHHHHHHHHcCCceEEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-------SAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~-------~~~~~~~~~~~~l~W~~~~ 844 (870)
....+|-++-|+|||||++++.+.. .....+...+....|++..
T Consensus 203 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 ------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 3356888999999999999996533 5578889999999999876
No 367
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.05 E-value=2.5e-06 Score=86.50 Aligned_cols=116 Identities=9% Similarity=0.145 Sum_probs=77.4
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCc--cceec-cccccccC-CC-Cccchhhhhc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYH-DWCESFST-YP-RSYDLLHADH 791 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h-~wce~f~t-yP-rtyDllHa~~ 791 (870)
..|||+|||.|.++.+|+.. +- .+|+-+|.. ..+..+.+ .|+ +-+++ |..+ +.. +| .+||+|++.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~- 115 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN- 115 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE-
T ss_pred ceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE-
Confidence 35999999999999999765 22 266677765 56655544 365 34444 3433 432 44 789988763
Q ss_pred cccc-------ccCCcChhhHHHhhhhcccCCcEEEEe-cChhhHHHHHHHHHcCCceEE
Q 002884 792 LFSQ-------LKNRCKLVPVMAEVDRIVRPGGKLIVR-DEPSAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 792 lfS~-------~~~rc~~~~vl~EmDRILRPgG~~iir-d~~~~~~~~~~~~~~l~W~~~ 843 (870)
|+. .+.|-....+|-++-|+|+|||.|+|. |.......+..++....|...
T Consensus 116 -~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 -FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp -SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred -CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 321 112222467899999999999999986 566666677777777677654
No 368
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.05 E-value=5.7e-06 Score=88.71 Aligned_cols=133 Identities=12% Similarity=0.201 Sum_probs=88.3
Q ss_pred ccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHhh----Cc---ccee-ccccccccCCCCccchh
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYER----GL---FGIY-HDWCESFSTYPRSYDLL 787 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~eR----Gl---ig~~-h~wce~f~tyPrtyDll 787 (870)
.|.. ..|||+|||.|.++.+|.+. +. .++-+|.+..+..+.++ |+ +-++ +|..+ ++|..||+|
T Consensus 165 ~~~~-~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v 237 (334)
T 2ip2_A 165 DFRG-RSFVDVGGGSGELTKAILQAEPSA---RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ---EVPSNGDIY 237 (334)
T ss_dssp CCTT-CEEEEETCTTCHHHHHHHHHCTTC---EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT---CCCSSCSEE
T ss_pred CCCC-CEEEEeCCCchHHHHHHHHHCCCC---EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC---CCCCCCCEE
Confidence 4555 88999999999999999764 22 23333445566555543 33 3333 35544 467889999
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh-------------------------hhHHHHHHHHHcCCceE
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-------------------------SAVTEVENFLKSLHWEI 842 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-------------------------~~~~~~~~~~~~l~W~~ 842 (870)
.+.++|-.+.. -....+|-++-|+|||||+++|.|.. .....++.+++.-.++.
T Consensus 238 ~~~~vl~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 316 (334)
T 2ip2_A 238 LLSRIIGDLDE-AASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAV 316 (334)
T ss_dssp EEESCGGGCCH-HHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEE
T ss_pred EEchhccCCCH-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCce
Confidence 99888875532 12347999999999999999998532 01345667777777776
Q ss_pred EEe-ecCCCceEEEEEe
Q 002884 843 LFA-FSKDQEGVLSAQK 858 (870)
Q Consensus 843 ~~~-~~~~~e~iL~~~K 858 (870)
... .......++.++|
T Consensus 317 ~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 317 ERIVDLPMETRMIVAAR 333 (334)
T ss_dssp EEEEEETTTEEEEEEEE
T ss_pred eEEEECCCCCEEEEEEe
Confidence 433 2234466787776
No 369
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.04 E-value=3.2e-06 Score=84.97 Aligned_cols=118 Identities=12% Similarity=0.175 Sum_probs=78.0
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHh----hCc--cceec-cccccccC-CC-Cccchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYH-DWCESFST-YP-RSYDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h-~wce~f~t-yP-rtyDllHa~ 790 (870)
..|||+|||.|.|+.+|+.. +. +|+-+|.. ..+..+.+ .|+ +-+++ |+.+ +.. +| .+||+|.++
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 45999999999999998765 22 45555544 55555444 354 33444 3443 442 44 789999886
Q ss_pred ccccccc-----CCcChhhHHHhhhhcccCCcEEEEe-cChhhHHHHHHHHHcCCceEEE
Q 002884 791 HLFSQLK-----NRCKLVPVMAEVDRIVRPGGKLIVR-DEPSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 791 ~lfS~~~-----~rc~~~~vl~EmDRILRPgG~~iir-d~~~~~~~~~~~~~~l~W~~~~ 844 (870)
......+ .|-....+|-++-|+|+|||.|+|. |.......+..++....|.+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 3221111 1122357999999999999999997 4556667777788777887654
No 370
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.04 E-value=2.1e-06 Score=86.83 Aligned_cols=132 Identities=16% Similarity=0.152 Sum_probs=81.0
Q ss_pred cccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCC-----Cc
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYP-----RS 783 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyP-----rt 783 (870)
.-++|||+|||.|.++.+|+.. +. .|+-+|.. ..+.++.+ .|+ +-+++ |..+.+..++ .+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 3568999999999999999873 32 34444443 45555443 365 44444 4445455555 69
Q ss_pred cchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecChh--hHHHHHHHHHcCCceEEEee-----cCCCceEEEE
Q 002884 784 YDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS--AVTEVENFLKSLHWEILFAF-----SKDQEGVLSA 856 (870)
Q Consensus 784 yDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~--~~~~~~~~~~~l~W~~~~~~-----~~~~e~iL~~ 856 (870)
||+|.+++....+. ....++.++ |+|||||.+|+.|-.. ....++.+...-+|+..... .....++.++
T Consensus 135 fD~V~~d~~~~~~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~ 210 (221)
T 3u81_A 135 LDMVFLDHWKDRYL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKA 210 (221)
T ss_dssp CSEEEECSCGGGHH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEEcCCcccch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCCceEEEcccccccCCCCCceEEE
Confidence 99998876555432 122466677 9999999999986431 12233333334456655431 1235688888
Q ss_pred EeC
Q 002884 857 QKG 859 (870)
Q Consensus 857 ~K~ 859 (870)
++.
T Consensus 211 ~~~ 213 (221)
T 3u81_A 211 IYQ 213 (221)
T ss_dssp EEC
T ss_pred EEe
Confidence 764
No 371
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.04 E-value=9.8e-07 Score=88.20 Aligned_cols=97 Identities=25% Similarity=0.367 Sum_probs=67.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----C-ccceec-cccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----G-LFGIYH-DWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----G-lig~~h-~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|...+. +|+-+|.. ..+..+.++ | -+-+++ |..+ ++ +| .+||+|.+.+++.
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LS-FEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CC-SCTTCEEEEEEESCGG
T ss_pred CeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CC-CCCCcEEEEEEcCchH
Confidence 5799999999999999988754 55555544 555555544 2 233333 3333 23 44 7999999987744
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.... -....+|.++-|+|||||.+++.+..
T Consensus 115 ~~~~-~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFEP-LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GCCH-HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hCCH-HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 3321 24567999999999999999998754
No 372
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.04 E-value=1.3e-06 Score=91.48 Aligned_cols=118 Identities=13% Similarity=0.076 Sum_probs=81.4
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-c-------------------cceeccccccccCCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-L-------------------FGIYHDWCESFSTYP 781 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-l-------------------ig~~h~wce~f~tyP 781 (870)
..|||+|||.|.++..|++.+. .|+-+|.. ..+..+.++- + ..-+.-.|..+...|
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 4699999999999999999986 67788866 7777776542 1 011121222232222
Q ss_pred ----CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEE-ec---------Ch--hhHHHHHHHHHcCCceEEEe
Q 002884 782 ----RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIV-RD---------EP--SAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 782 ----rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~ii-rd---------~~--~~~~~~~~~~~~l~W~~~~~ 845 (870)
.+||+|-+.++|..+. ......++-+|-|+|||||.|+| +- +. ...+.+..++.. .|++...
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~ 224 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCL 224 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEE
Confidence 7999999888777653 24566799999999999999963 31 11 235788888877 4877543
No 373
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.03 E-value=8.8e-07 Score=95.25 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=66.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Ccc--------ceecccc------cccc-CCC-
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLF--------GIYHDWC------ESFS-TYP- 781 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gli--------g~~h~wc------e~f~-tyP- 781 (870)
..|||+|||.|+....+...+.+ +|+-+|.. ..|..+.+| |+- -.....+ +.+. .+|
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46999999999977766655542 56777766 788777765 321 1112222 3332 355
Q ss_pred CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 782 RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 782 rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.+||+|-|..++-..-..-.+..+|-+|-|+|||||+||++...
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999987654432111113568999999999999999998653
No 374
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.03 E-value=1.3e-06 Score=96.43 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=68.3
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHHH----hhCc---cceeccccccccCCCCccchhhhhccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPIIY----ERGL---FGIYHDWCESFSTYPRSYDLLHADHLFSQ 795 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i~----eRGl---ig~~h~wce~f~tyPrtyDllHa~~lfS~ 795 (870)
..|||+|||+|.++..|++.+. -.|+-+|....+..+. ..|+ +-+++.-.+.+ .+|..||+|++..+...
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~Iv~~~~~~~ 141 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA--RKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDI-SLPEKVDVIISEWMGYF 141 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC--SEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGC-CCSSCEEEEEECCCBTT
T ss_pred CEEEEeccCcCHHHHHHHhcCC--CEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhc-CcCCcceEEEEcChhhc
Confidence 5699999999999999988764 1444444445554443 3455 45555433443 35699999999665554
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
....-.+..+|.+++|+|||||++|+.
T Consensus 142 l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 142 LLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp BTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred ccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 443345777999999999999999886
No 375
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.01 E-value=7.5e-07 Score=94.54 Aligned_cols=44 Identities=23% Similarity=0.356 Sum_probs=35.9
Q ss_pred CCCccchhhhhccccccc---CCcChhhHHHhhhhcccCCcEEEEec
Q 002884 780 YPRSYDLLHADHLFSQLK---NRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 780 yPrtyDllHa~~lfS~~~---~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.+.+||+|.|.+++...+ ....+..+|-+|-|+|||||+|||..
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 358999999988875443 44567789999999999999999974
No 376
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.00 E-value=1.5e-05 Score=88.55 Aligned_cols=98 Identities=14% Similarity=0.071 Sum_probs=70.4
Q ss_pred CCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHc--------------CCCcEEEEc-CcccC-C
Q 002884 467 YTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALER--------------GIPAISAVM-GTKRL-Q 526 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~er--------------gl~~~~~v~-dae~L-P 526 (870)
++.+|||+|||+|.++..++.+ .|+++|+++..+..++.+..... ++..+.++. +...+ .
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4679999999999998877653 69999999999988875554441 555344444 33222 1
Q ss_pred CCCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 527 FPRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 527 fpd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
...+.||+|+... + -....+|..+.++|||||+|+++.
T Consensus 127 ~~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 1135799999752 1 124688999999999999998874
No 377
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.00 E-value=6.6e-06 Score=85.34 Aligned_cols=131 Identities=12% Similarity=0.140 Sum_probs=82.6
Q ss_pred cccccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhhCc---cceec-cccccccCC-----CCccch
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYERGL---FGIYH-DWCESFSTY-----PRSYDL 786 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eRGl---ig~~h-~wce~f~ty-----PrtyDl 786 (870)
.-++|||+|||.|.++.+|+.. .|+.+-+.|.-..-....+...|+ |-+++ |..+.+..+ +.+||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 3468999999999999988763 355555555444445555555676 34444 333333333 578999
Q ss_pred hhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------hhHHHHHHHHHcC----CceEEEeecCCC
Q 002884 787 LHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------SAVTEVENFLKSL----HWEILFAFSKDQ 850 (870)
Q Consensus 787 lHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------~~~~~~~~~~~~l----~W~~~~~~~~~~ 850 (870)
|.+++.. -....+|-++-|+|||||++|+.|-. .....++.+.+.| ++++.+. .-.
T Consensus 140 V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p~~ 211 (242)
T 3r3h_A 140 IFIDADK------TNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLL--AIA 211 (242)
T ss_dssp EEEESCG------GGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEE--SSS
T ss_pred EEEcCCh------HHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEE--Ecc
Confidence 9876542 23446888999999999999996532 1123344444443 4554442 235
Q ss_pred ceEEEEEeC
Q 002884 851 EGVLSAQKG 859 (870)
Q Consensus 851 e~iL~~~K~ 859 (870)
.++++++|.
T Consensus 212 dG~~~~~k~ 220 (242)
T 3r3h_A 212 DGMFLVQPI 220 (242)
T ss_dssp SCEEEEEEC
T ss_pred CceEEEEEc
Confidence 788988874
No 378
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.99 E-value=5.2e-06 Score=78.46 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=75.8
Q ss_pred cccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhhCccceec-cccccccC-------CC-Cccchhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYERGLFGIYH-DWCESFST-------YP-RSYDLLH 788 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eRGlig~~h-~wce~f~t-------yP-rtyDllH 788 (870)
.+|||+|||.|.++.+|... .|+.+-+.| - +.+ .-+.+++ |+.+ ++. +| .+||+|.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~----~~~----~~~~~~~~d~~~-~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-M----DPI----VGVDFLQGDFRD-ELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-C----CCC----TTEEEEESCTTS-HHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-c----ccc----CcEEEEEccccc-chhhhhhhccCCCCceeEEE
Confidence 47999999999999998764 345554444 1 111 1123333 3332 220 44 7999999
Q ss_pred hhcccccccCC--cC------hhhHHHhhhhcccCCcEEEEecCh-hhHHHHHHHHHcCCceEEEee------cCCCceE
Q 002884 789 ADHLFSQLKNR--CK------LVPVMAEVDRIVRPGGKLIVRDEP-SAVTEVENFLKSLHWEILFAF------SKDQEGV 853 (870)
Q Consensus 789 a~~lfS~~~~r--c~------~~~vl~EmDRILRPgG~~iird~~-~~~~~~~~~~~~l~W~~~~~~------~~~~e~i 853 (870)
++..|...... -. ...+|.++-|+|||||.+++.... .....+...+.. .|...... ....+.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 172 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSREVY 172 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCEEE
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCceEE
Confidence 98776543221 00 157899999999999999997432 233444444444 36554321 1235788
Q ss_pred EEEEe
Q 002884 854 LSAQK 858 (870)
Q Consensus 854 L~~~K 858 (870)
++|++
T Consensus 173 ~~~~~ 177 (180)
T 1ej0_A 173 IVATG 177 (180)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 88876
No 379
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.98 E-value=1e-05 Score=93.83 Aligned_cols=104 Identities=14% Similarity=0.024 Sum_probs=70.4
Q ss_pred CCCCEEEEECCCCchhHHHHhc----------------------CCEEEEeCChhhHHHHHHHHHHHcCCCc------EE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFE----------------------RDVLTMSFAPKDEHDAQIQFALERGIPA------IS 517 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~----------------------r~VtgVDiSp~ml~~A~vq~A~ergl~~------~~ 517 (870)
.++.+|||.|||+|.|+..+.+ ..++|+|+++.++..|..... .+|+.. .+
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~-l~gi~~~~~~~~~I 246 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL-LHDIEGNLDHGGAI 246 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH-TTTCCCBGGGTBSE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH-HhCCCccccccCCe
Confidence 4567999999999988765542 269999999999888775443 345542 33
Q ss_pred EEcCcccC-CCCCCceeEEEecccccc-ccc-----------C-hHHHHHHHHhhcCCCcEEEEEEC
Q 002884 518 AVMGTKRL-QFPRNVFDLVHCARCRVP-WHI-----------D-GGKLLLELNRVLRPGGYFVWSAT 570 (870)
Q Consensus 518 ~v~dae~L-Pfpd~SFDlV~Ss~~alh-w~~-----------D-~~~vL~Ei~RVLKPGG~Lv~S~~ 570 (870)
...+.... +.....||+|+++.-... +.. + ...++..+.+.|||||++++..+
T Consensus 247 ~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 247 RLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp EESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 44443222 234578999999742111 110 1 13688999999999999998754
No 380
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.97 E-value=2e-05 Score=88.19 Aligned_cols=97 Identities=11% Similarity=-0.048 Sum_probs=71.3
Q ss_pred CCCEEEEECCCCchhHHHHhc-----CCEEEEeCChhhHHHHHHHHHHHcCCCc--EEEEcCc-cc-CC-CCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYLFE-----RDVLTMSFAPKDEHDAQIQFALERGIPA--ISAVMGT-KR-LQ-FPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~-----r~VtgVDiSp~ml~~A~vq~A~ergl~~--~~~v~da-e~-LP-fpd~SFDlV~ 536 (870)
++.+|||++||+|.++..++. ..|+++|+++..+..++. .+...++.. +.++.++ .. +. ...+.||+|+
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~-N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKE-NFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 467999999999999988776 269999999998888774 455556654 4555443 22 22 1245799999
Q ss_pred ecccccccccChHHHHHHHHhhcCCCcEEEEEE
Q 002884 537 CARCRVPWHIDGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 537 Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
+.. + .....++..+.++|+|||+|+++.
T Consensus 131 lDP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 131 LDP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 864 2 123568999999999999999884
No 381
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.97 E-value=4e-06 Score=90.98 Aligned_cols=134 Identities=13% Similarity=0.198 Sum_probs=82.9
Q ss_pred cccccccccccccccchhHHhhhcCC--Ce--EEEEeccCCCCCChhHHHhhCccc----eeccccccccCCCCccchhh
Q 002884 717 INWSNVRNVMDMRAVYGGFAAALKDL--QV--WVMNVVNVNSPDTLPIIYERGLFG----IYHDWCESFSTYPRSYDLLH 788 (870)
Q Consensus 717 i~W~~~RnvmDm~ag~GgfaaaL~~~--~v--wvmNvvp~~~~~tl~~i~eRGlig----~~h~wce~f~tyPrtyDllH 788 (870)
+.|.....|||+|||.|.++.+|.+. ++ ++..+.++-.. ..+...|+.+ +.+|.. ..+| +||+|.
T Consensus 180 ~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~---~~~~~~~~~~~v~~~~~d~~---~~~p-~~D~v~ 252 (348)
T 3lst_A 180 GDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVAR---HRLDAPDVAGRWKVVEGDFL---REVP-HADVHV 252 (348)
T ss_dssp SCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTT---CCCCCGGGTTSEEEEECCTT---TCCC-CCSEEE
T ss_pred CCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhc---ccccccCCCCCeEEEecCCC---CCCC-CCcEEE
Confidence 35667789999999999999999763 33 33333111110 0111124322 223443 4567 999999
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh-------------------------hhHHHHHHHHHcCCceEE
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-------------------------SAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-------------------------~~~~~~~~~~~~l~W~~~ 843 (870)
+.++|-.+.+ -....+|-++-|+|||||.|+|.|.. .....++.+++.-.|+..
T Consensus 253 ~~~vlh~~~d-~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 331 (348)
T 3lst_A 253 LKRILHNWGD-EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD 331 (348)
T ss_dssp EESCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE
T ss_pred EehhccCCCH-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE
Confidence 9888865543 12247999999999999999997631 124566777777777765
Q ss_pred Eeec-CCCceEEEEEe
Q 002884 844 FAFS-KDQEGVLSAQK 858 (870)
Q Consensus 844 ~~~~-~~~e~iL~~~K 858 (870)
.... .....|+.++|
T Consensus 332 ~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 332 RVVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEEECSSSCEEEEEEE
T ss_pred EEEECCCCcEEEEEEe
Confidence 4322 23344555554
No 382
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.97 E-value=3.2e-06 Score=91.88 Aligned_cols=135 Identities=21% Similarity=0.296 Sum_probs=88.3
Q ss_pred ccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHh----hCcc---cee-ccccccccCCCCccchh
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYE----RGLF---GIY-HDWCESFSTYPRSYDLL 787 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~e----RGli---g~~-h~wce~f~tyPrtyDll 787 (870)
.+.....|||+|||.|.++.+|.+. ++- ++-+|.+..+..+.+ .|+. -++ +|+.+ .+|..||+|
T Consensus 179 ~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v 252 (374)
T 1qzz_A 179 DWSAVRHVLDVGGGNGGMLAAIALRAPHLR---GTLVELAGPAERARRRFADAGLADRVTVAEGDFFK---PLPVTADVV 252 (374)
T ss_dssp CCTTCCEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSCCEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHCCCCE---EEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---cCCCCCCEE
Confidence 3455678999999999999999765 332 222333444544443 3543 222 24443 456669999
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecC--h--h-----------------------hHHHHHHHHHcCCc
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE--P--S-----------------------AVTEVENFLKSLHW 840 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~--~--~-----------------------~~~~~~~~~~~l~W 840 (870)
.+.++|-.+... ....+|-++-|+|||||+++|.+. . + ....++.++..-.|
T Consensus 253 ~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf 331 (374)
T 1qzz_A 253 LLSFVLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGL 331 (374)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTE
T ss_pred EEeccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCC
Confidence 998888655321 123699999999999999998776 2 1 24567778888888
Q ss_pred eEEEe-ecCCCc-----eEEEEEeC
Q 002884 841 EILFA-FSKDQE-----GVLSAQKG 859 (870)
Q Consensus 841 ~~~~~-~~~~~e-----~iL~~~K~ 859 (870)
++... ...... .++.++|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 332 ALASERTSGSTTLPFDFSILEFTAV 356 (374)
T ss_dssp EEEEEEEECCSSCSSCEEEEEEEEC
T ss_pred ceEEEEECCCCcccCCcEEEEEEEC
Confidence 76543 233344 78888885
No 383
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.96 E-value=5.2e-06 Score=89.91 Aligned_cols=135 Identities=20% Similarity=0.339 Sum_probs=87.7
Q ss_pred ccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHh----hCcc---cee-ccccccccCCCCccchh
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYE----RGLF---GIY-HDWCESFSTYPRSYDLL 787 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~e----RGli---g~~-h~wce~f~tyPrtyDll 787 (870)
.+.....|||+|||.|.++.+|.+. ++-+ +-+|-+..+..+.+ .|+. -++ +|+.+ .+|..||+|
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~---~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~D~v 253 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSA---TVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLPRKADAI 253 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCSSCEEEE
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEE---EEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCCCCccEE
Confidence 3455678999999999999999765 3322 22333455555444 3442 222 24544 456669999
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh--h------------------------hHHHHHHHHHcCCce
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP--S------------------------AVTEVENFLKSLHWE 841 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~--~------------------------~~~~~~~~~~~l~W~ 841 (870)
.+.++|-.+.. -....+|-++-|+|||||++||.+.. . ....++.+++.-.|+
T Consensus 254 ~~~~vl~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 254 ILSFVLLNWPD-HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp EEESCGGGSCH-HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEcccccCCCH-HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 98888765532 12246999999999999999987654 0 135667777777887
Q ss_pred EEEee-cCCC-----ceEEEEEeC
Q 002884 842 ILFAF-SKDQ-----EGVLSAQKG 859 (870)
Q Consensus 842 ~~~~~-~~~~-----e~iL~~~K~ 859 (870)
+.... .... ..++.|+|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 333 VEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEEEeCCCCcccCccEEEEEEeC
Confidence 65432 2222 578888884
No 384
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.96 E-value=4e-06 Score=84.47 Aligned_cols=110 Identities=9% Similarity=0.039 Sum_probs=75.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Ccc---ceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLF---GIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gli---g~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+..+. .|+-+|.. ..+..+.++ |+. -+++ |..+.+.. ...||+|-+++.+
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~~~D~v~~~~~~ 132 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGG---RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LPLPEAVFIGGGG 132 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SCCCSEEEECSCC
T ss_pred CEEEEecCCCCHHHHHHHHcCC---EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CCCCCEEEECCcc
Confidence 4699999999999999987743 45555554 566555443 554 3333 23222222 2479998765422
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec-ChhhHHHHHHHHHcCCceEEE
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD-EPSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird-~~~~~~~~~~~~~~l~W~~~~ 844 (870)
... +|-++-|+|||||.+|+.. ..+....+...++...+++..
T Consensus 133 -------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 133 -------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp -------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEE
T ss_pred -------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEE
Confidence 455 9999999999999999985 456677888888888887654
No 385
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.96 E-value=3.8e-06 Score=86.99 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=72.9
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----------hCc--cceecccccc-ccC-CC-Cccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----------RGL--FGIYHDWCES-FST-YP-RSYD 785 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----------RGl--ig~~h~wce~-f~t-yP-rtyD 785 (870)
..|||+|||+|.|+.+|+.. +- .+|+-+|-. ..+..+.+ .|+ +-+++.=... ++. +| .+||
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~--~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPD--TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTT--SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 45999999999999999865 22 155556654 55554432 233 3344432232 332 44 7999
Q ss_pred hhhhhccccc-------ccCCcChhhHHHhhhhcccCCcEEEEe-cChhhHHHHHHHHHcCC-ceE
Q 002884 786 LLHADHLFSQ-------LKNRCKLVPVMAEVDRIVRPGGKLIVR-DEPSAVTEVENFLKSLH-WEI 842 (870)
Q Consensus 786 llHa~~lfS~-------~~~rc~~~~vl~EmDRILRPgG~~iir-d~~~~~~~~~~~~~~l~-W~~ 842 (870)
+|.. .|.. .+.|.....+|-++-|+|||||.|+|. |.......+...+.... |..
T Consensus 126 ~v~~--~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 126 KMFF--LFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEE--ESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEEE
T ss_pred EEEE--eCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 9865 2221 123334467999999999999999985 66666777777776654 443
No 386
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.95 E-value=1.9e-06 Score=88.04 Aligned_cols=96 Identities=20% Similarity=0.313 Sum_probs=65.9
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceec-cccccccCCCCccchhhhh-ccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYH-DWCESFSTYPRSYDLLHAD-HLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h-~wce~f~tyPrtyDllHa~-~lf 793 (870)
-..|||+|||.|.++..|++.+. +|+-+|.. ..+..+.++ |+ +-+++ |+.+ + +++.+||+|.+. +.+
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~-~~~~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-I-AFKNEFDAVTMFFSTI 116 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-C-CCCSCEEEEEECSSGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-c-ccCCCccEEEEcCCch
Confidence 35799999999999999998875 56666654 666665543 43 33333 3332 2 346899999764 222
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
... ..-.+..+|.++-|+|+|||.+|+.-
T Consensus 117 ~~~-~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 117 MYF-DEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp GGS-CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC-CHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 222 22245679999999999999999864
No 387
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.95 E-value=3.5e-06 Score=84.28 Aligned_cols=92 Identities=16% Similarity=0.094 Sum_probs=61.1
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHH----hhCc---cceec-cccccccCCCCccchhhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIY----ERGL---FGIYH-DWCESFSTYPRSYDLLHA 789 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~----eRGl---ig~~h-~wce~f~tyPrtyDllHa 789 (870)
-+.|||+|||.|.++.+|+.. +. .|+-+|.. ..+.++. ..|+ +-+++ |..+.+...+. ||+|.+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 467999999999999999765 22 23333433 3444433 3455 33444 34443344467 999877
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
++- ......+|-++-|+|||||.+|+.+
T Consensus 133 ~~~------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 133 DCD------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ETT------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cCC------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 521 2356678999999999999999965
No 388
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.94 E-value=5.2e-06 Score=91.05 Aligned_cols=135 Identities=17% Similarity=0.294 Sum_probs=90.0
Q ss_pred cccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHH----hhCc---ccee-ccccccccCCCCccch
Q 002884 717 INWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIY----ERGL---FGIY-HDWCESFSTYPRSYDL 786 (870)
Q Consensus 717 i~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~----eRGl---ig~~-h~wce~f~tyPrtyDl 786 (870)
..|.....|||+|||.|.++.+|.+. ++- ++-+|.+..+..+. +.|+ |-+. +|.. .++|..||+
T Consensus 198 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~---~~~p~~~D~ 271 (369)
T 3gwz_A 198 YDFSGAATAVDIGGGRGSLMAAVLDAFPGLR---GTLLERPPVAEEARELLTGRGLADRCEILPGDFF---ETIPDGADV 271 (369)
T ss_dssp SCCTTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTT---TCCCSSCSE
T ss_pred CCCccCcEEEEeCCCccHHHHHHHHHCCCCe---EEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCC---CCCCCCceE
Confidence 35667789999999999999999765 332 22223344444433 3354 2222 2444 456668999
Q ss_pred hhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------------------hhHHHHHHHHHcCCceE
Q 002884 787 LHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------------------SAVTEVENFLKSLHWEI 842 (870)
Q Consensus 787 lHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------------------~~~~~~~~~~~~l~W~~ 842 (870)
|.+.++|-.+.. -....+|-++-|+|||||+++|.|.. .....++.+++.-.|+.
T Consensus 272 v~~~~vlh~~~d-~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~ 350 (369)
T 3gwz_A 272 YLIKHVLHDWDD-DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRV 350 (369)
T ss_dssp EEEESCGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEE
T ss_pred EEhhhhhccCCH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeE
Confidence 999888865532 11236999999999999999997521 11466778888888887
Q ss_pred EEeec--CCCceEEEEEe
Q 002884 843 LFAFS--KDQEGVLSAQK 858 (870)
Q Consensus 843 ~~~~~--~~~e~iL~~~K 858 (870)
..... .....|+.|+|
T Consensus 351 ~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 351 ERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEECSSSSEEEEEEEE
T ss_pred EEEEECCCCCcEEEEEEe
Confidence 65433 45667888876
No 389
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.94 E-value=6e-06 Score=89.76 Aligned_cols=135 Identities=18% Similarity=0.244 Sum_probs=85.2
Q ss_pred ccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHhh----Cccc---eec-cccccccCCCCccchh
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYER----GLFG---IYH-DWCESFSTYPRSYDLL 787 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~eR----Glig---~~h-~wce~f~tyPrtyDll 787 (870)
.+.....|||+|||.|.++.+|.+. ++- ++-+|.+..+..+.++ |+.+ ++. |..+. ++|. +|+|
T Consensus 187 ~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~---~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v 260 (359)
T 1x19_A 187 KLDGVKKMIDVGGGIGDISAAMLKHFPELD---STILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAV 260 (359)
T ss_dssp CCTTCCEEEEESCTTCHHHHHHHHHCTTCE---EEEEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEE
T ss_pred CCCCCCEEEEECCcccHHHHHHHHHCCCCe---EEEEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEE
Confidence 3556678999999999999999865 332 2222335556555544 6533 332 44332 3444 4999
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh----------------------------hhHHHHHHHHHcCC
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP----------------------------SAVTEVENFLKSLH 839 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~----------------------------~~~~~~~~~~~~l~ 839 (870)
.+.++|-.+.+ -....+|-++-|+|||||.+||.+.. .....++.+++.-.
T Consensus 261 ~~~~vlh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aG 339 (359)
T 1x19_A 261 LFCRILYSANE-QLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLG 339 (359)
T ss_dssp EEESCGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHT
T ss_pred EEechhccCCH-HHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCC
Confidence 99888776543 12567999999999999999887611 12345566666666
Q ss_pred ceEEEeecCCCceEEEEEeC
Q 002884 840 WEILFAFSKDQEGVLSAQKG 859 (870)
Q Consensus 840 W~~~~~~~~~~e~iL~~~K~ 859 (870)
++......-....+++++|+
T Consensus 340 f~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 340 YKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp CEEEEEEEETTEEEEEEECC
T ss_pred CceEEEEecCCceEEEEeCC
Confidence 66543211115567777774
No 390
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.93 E-value=9.7e-06 Score=79.89 Aligned_cols=126 Identities=12% Similarity=0.242 Sum_probs=73.1
Q ss_pred cccccccccchhHHhhhcCC------CeEEEEeccCCCCCChhHHHhhCccceecccccccc------------------
Q 002884 723 RNVMDMRAVYGGFAAALKDL------QVWVMNVVNVNSPDTLPIIYERGLFGIYHDWCESFS------------------ 778 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~------~vwvmNvvp~~~~~tl~~i~eRGlig~~h~wce~f~------------------ 778 (870)
..|||+|||.|+++.+|++. .|+.+-+.|.... .++.-+..|+.+. .
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~-~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKD-NMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTT-SSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccch-hhhhhccccccccccchhh
Confidence 46999999999999999754 2555555553210 1221122233322 1
Q ss_pred ------CCC-CccchhhhhcccccccCC--------cChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCce-
Q 002884 779 ------TYP-RSYDLLHADHLFSQLKNR--------CKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWE- 841 (870)
Q Consensus 779 ------tyP-rtyDllHa~~lfS~~~~r--------c~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~- 841 (870)
.+| .+||+|.+++.+...... -....+|.++-|+|||||+|++..- ......+...++.. |.
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~-f~~ 173 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGM-FQL 173 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTT-EEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHH-Hhe
Confidence 144 699999987765431100 0012478899999999999998632 12234455555553 43
Q ss_pred EEEee-----cCCCceEEEEEe
Q 002884 842 ILFAF-----SKDQEGVLSAQK 858 (870)
Q Consensus 842 ~~~~~-----~~~~e~iL~~~K 858 (870)
+.... ....|.++||++
T Consensus 174 v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 174 VHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEECCCC-----CCEEEEEEEE
T ss_pred EEEECCcccCCcCceEEEEEec
Confidence 33221 124688999986
No 391
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.92 E-value=3e-06 Score=91.75 Aligned_cols=96 Identities=16% Similarity=0.215 Sum_probs=66.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHHHh----hCc---cceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPIIYE----RGL---FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i~e----RGl---ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|++.+. -.|+-+|....+..+.+ .|+ |-+++.-.+.+ .+| ..||+|.+..++.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWMGY 116 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCCBT
T ss_pred CEEEEecCccHHHHHHHHHCCC--CEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCchh
Confidence 4699999999999999988754 13334443334544433 365 44555434443 355 8999999977655
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIV 821 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~ii 821 (870)
.+...-.+..+|.+++|+|+|||.+|+
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 544445677899999999999999984
No 392
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.91 E-value=2.5e-06 Score=93.44 Aligned_cols=100 Identities=12% Similarity=0.294 Sum_probs=68.1
Q ss_pred ccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHhh----Cc---ccee-ccccccccCCCCccchhhh
Q 002884 720 SNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYER----GL---FGIY-HDWCESFSTYPRSYDLLHA 789 (870)
Q Consensus 720 ~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~eR----Gl---ig~~-h~wce~f~tyPrtyDllHa 789 (870)
...+.|||+|||.|.++.+|++. ++ .++-+|.+..+..+.++ |+ +.++ +|..+.-.++|.+||+|.+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 45688999999999999999763 33 23333334555555544 54 2232 2443321257899999999
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.+++-.+... ....+|-++-|+|||||.|+|.|
T Consensus 255 ~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 8888655431 23468999999999999999975
No 393
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.91 E-value=1.4e-06 Score=88.74 Aligned_cols=98 Identities=10% Similarity=0.032 Sum_probs=67.7
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCc---cceec-cccccc--cCCC--Cccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGL---FGIYH-DWCESF--STYP--RSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGl---ig~~h-~wce~f--~tyP--rtyDllHa~~lf 793 (870)
..|||+|||.|.++..|+.... +|+-+|.. ..+..+.++-- +-+++ |..+.- ..|+ ..||+|.+..+|
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 5699999999999999987654 55666654 66766666531 22222 332210 1122 349999998888
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
..... -....+|-++-|+|||||+++|.+.
T Consensus 135 ~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 135 HHIPV-EKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp TTSCG-GGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hcCCH-HHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 76642 3466899999999999999888753
No 394
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.91 E-value=5.5e-06 Score=84.19 Aligned_cols=92 Identities=17% Similarity=0.305 Sum_probs=56.5
Q ss_pred cccccccccchhHHhhhcCC-C-eEEEEeccCCCC-CC----hhHHHhhC-ccceecccccc--ccCCCCccchhhhhcc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-Q-VWVMNVVNVNSP-DT----LPIIYERG-LFGIYHDWCES--FSTYPRSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~-vwvmNvvp~~~~-~t----l~~i~eRG-lig~~h~wce~--f~tyPrtyDllHa~~l 792 (870)
..|||+|||+|.++..|.+. + - .|+-+|.. .. +..+..+. +.-+..|..+. +.+++.+||+|.++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~---~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEG---IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTS---EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcCCC---EEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 36999999999999988764 1 1 34445544 22 23333332 22233343332 134568999998851
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
. ..-....+|.|+-|+|||||.|++.
T Consensus 135 -~---~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 -A---QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp -C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -c---ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 1112334589999999999999997
No 395
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.90 E-value=1.8e-06 Score=91.90 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=69.4
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-------------ccceecccccccc---CC---C
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-------------LFGIYHDWCESFS---TY---P 781 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-------------lig~~h~wce~f~---ty---P 781 (870)
-..|||+|||.|+++..|...+. -.|+-+|.. ..+..+.+|- -+-+++.-++.++ .+ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 45799999999999999987643 245556654 5666665542 1233443344443 24 2
Q ss_pred Cccchhhhhcccccc-cCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 782 RSYDLLHADHLFSQL-KNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 782 rtyDllHa~~lfS~~-~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.+||+|.+..+|-.. .+.-.+..+|.++-|+|||||+||+....
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999887666433 22234567999999999999999998654
No 396
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.88 E-value=5.9e-06 Score=88.19 Aligned_cols=134 Identities=16% Similarity=0.200 Sum_probs=86.6
Q ss_pred ccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHhh----Ccc---ceec-cccccccCCCCccchhhh
Q 002884 720 SNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYER----GLF---GIYH-DWCESFSTYPRSYDLLHA 789 (870)
Q Consensus 720 ~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~eR----Gli---g~~h-~wce~f~tyPrtyDllHa 789 (870)
.....|||+|||.|.++.+|.+. +. .++-+|.+..+..+.++ |+- -+++ |+.+. ++|..||+|.+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEE
Confidence 45678999999999999999865 32 33333433444444433 543 3333 34332 46767999999
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEecChh---------------------------hHHHHHHHHHcCCceE
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS---------------------------AVTEVENFLKSLHWEI 842 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~---------------------------~~~~~~~~~~~l~W~~ 842 (870)
.++|..+.. -....+|-++-|+|||||+++|.+... ....++.+++.-.++.
T Consensus 239 ~~~l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~ 317 (335)
T 2r3s_A 239 PNFLHHFDV-ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSH 317 (335)
T ss_dssp ESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSE
T ss_pred cchhccCCH-HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCe
Confidence 888876532 134579999999999999999875320 1456777777778876
Q ss_pred EEe-ecCCCceEEEEEeC
Q 002884 843 LFA-FSKDQEGVLSAQKG 859 (870)
Q Consensus 843 ~~~-~~~~~e~iL~~~K~ 859 (870)
... .......+++++++
T Consensus 318 ~~~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 318 SQLHSLPTTQQQVIVAYK 335 (335)
T ss_dssp EEEECCTTSSSEEEEEEC
T ss_pred eeEEECCCCceeEEEecC
Confidence 543 22334567777653
No 397
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.88 E-value=1.3e-06 Score=84.52 Aligned_cols=97 Identities=15% Similarity=0.249 Sum_probs=65.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|...+. -.|+-+|.. ..+..+.+ .|+ +-+++ |+.+.+...+..||+|.++..|
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 4699999999999999988754 355666654 55555443 344 33444 4544344456789999997666
Q ss_pred ccccCCcChhhHHHhhh--hcccCCcEEEEecCh
Q 002884 794 SQLKNRCKLVPVMAEVD--RIVRPGGKLIVRDEP 825 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmD--RILRPgG~~iird~~ 825 (870)
.. .....++..+. |+|+|||.+++....
T Consensus 111 ~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 111 AK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred Cc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 32 23445666665 999999999998544
No 398
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.88 E-value=2.3e-06 Score=87.59 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=71.9
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHH----HhhCc--cceec-cccccccC-CC-Cccchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPII----YERGL--FGIYH-DWCESFST-YP-RSYDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i----~eRGl--ig~~h-~wce~f~t-yP-rtyDllHa~ 790 (870)
..|||+|||.|.++.+|+.. +. +|+-+|.. ..+..+ .+.|+ +-+++ |..+-+.. +| .+||+|++.
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 46999999999999999754 32 45555654 455443 34465 33343 33222231 44 899999874
Q ss_pred cccccccCCc-----ChhhHHHhhhhcccCCcEEEEe-cChhhHHHHHHHHHcC-Cce
Q 002884 791 HLFSQLKNRC-----KLVPVMAEVDRIVRPGGKLIVR-DEPSAVTEVENFLKSL-HWE 841 (870)
Q Consensus 791 ~lfS~~~~rc-----~~~~vl~EmDRILRPgG~~iir-d~~~~~~~~~~~~~~l-~W~ 841 (870)
......+.+. ....+|-++-|+|||||.|+|. |...+...+..++... .|+
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~ 170 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK 170 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc
Confidence 2221122222 2235899999999999999986 5555666666666543 344
No 399
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.87 E-value=0.00014 Score=78.52 Aligned_cols=127 Identities=16% Similarity=0.176 Sum_probs=81.8
Q ss_pred CCccccccH-HHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHH-cC-
Q 002884 440 GGTQFIHGA-LHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALE-RG- 512 (870)
Q Consensus 440 ggt~F~~gA-~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~e-rg- 512 (870)
|..++...- ..|.+.|... +... ....++||-||.|.|..++.+++. +|+.+||++..+..++.-+..- .+
T Consensus 57 g~~q~te~De~~YhE~l~h~-~l~~-~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~ 134 (294)
T 3o4f_A 57 GVVQTTERDEFIYHEMMTHV-PLLA-HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGS 134 (294)
T ss_dssp TEEEEETTTHHHHHHHHHHH-HHHH-SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTG
T ss_pred CchhhccccHHHHHHHHHHH-HHhh-CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccc
Confidence 334444333 3455544432 3222 345789999999999999999875 7999999999887776443321 11
Q ss_pred --CCcEEE-EcCc-ccCCCCCCceeEEEeccccccccc----ChHHHHHHHHhhcCCCcEEEEEE
Q 002884 513 --IPAISA-VMGT-KRLQFPRNVFDLVHCARCRVPWHI----DGGKLLLELNRVLRPGGYFVWSA 569 (870)
Q Consensus 513 --l~~~~~-v~da-e~LPfpd~SFDlV~Ss~~alhw~~----D~~~vL~Ei~RVLKPGG~Lv~S~ 569 (870)
-+.+.. +.|. .-+--..++||+|+.-. .-+... .-..++..+.|+|+|||+|+...
T Consensus 135 ~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 135 YDDPRFKLVIDDGVNFVNQTSQTFDVIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp GGCTTEEEEESCTTTTTSCSSCCEEEEEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCcEEEEechHHHHHhhccccCCEEEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 233434 4443 34444567899999742 112111 12578999999999999999763
No 400
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.85 E-value=9.3e-06 Score=81.37 Aligned_cols=126 Identities=13% Similarity=0.169 Sum_probs=73.5
Q ss_pred cccccccccchhHHhhhcCCC--eEEEEeccCCCCCChhHHHhhCccceeccccccccC-------CC----Cccchhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQ--VWVMNVVNVNSPDTLPIIYERGLFGIYHDWCESFST-------YP----RSYDLLHA 789 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~--vwvmNvvp~~~~~tl~~i~eRGlig~~h~wce~f~t-------yP----rtyDllHa 789 (870)
.+|||+|||+|+++.+|++++ |+-+-+.|.... .|+.-+..|..+. .+ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~--------~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI--------AGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC--------TTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC--------CCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 579999999999999999874 444555543211 2333333344332 11 11 48999988
Q ss_pred hccccccc--------CCcChhhHHHhhhhcccCCcEEEEec-ChhhHHHHHHHHHcCCceEE-Ee-----ecCCCceEE
Q 002884 790 DHLFSQLK--------NRCKLVPVMAEVDRIVRPGGKLIVRD-EPSAVTEVENFLKSLHWEIL-FA-----FSKDQEGVL 854 (870)
Q Consensus 790 ~~lfS~~~--------~rc~~~~vl~EmDRILRPgG~~iird-~~~~~~~~~~~~~~l~W~~~-~~-----~~~~~e~iL 854 (870)
+.-..... .......+|.++-|+|||||.||+.- .......+...++.. +... +. -....|.++
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEEECC------CCEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEEECCCCccCCCceEEE
Confidence 65432111 11123467889999999999999753 122234455555543 3332 22 123579999
Q ss_pred EEEe
Q 002884 855 SAQK 858 (870)
Q Consensus 855 ~~~K 858 (870)
||++
T Consensus 177 v~~~ 180 (191)
T 3dou_A 177 MFFG 180 (191)
T ss_dssp EEEE
T ss_pred EEee
Confidence 9986
No 401
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.81 E-value=7.3e-06 Score=88.50 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=57.3
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCCCChhHH--HhhCc--cceeccccccccCC-CCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSPDTLPII--YERGL--FGIYHDWCESFSTY-PRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~~tl~~i--~eRGl--ig~~h~wce~f~ty-PrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|+|+..|+++ .|.-+-+..+..+..+..+ ...|. +-++.+ . .+... +.+||+|.|+..|+..
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-V-DVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-C-CTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-c-ccccCCcCCCCEEEECCccccC
Confidence 46999999999999999887 3544444211112211111 01121 222222 0 22223 4799999998777511
Q ss_pred cC---CcChhhHHHhhhhcccCCcEEEEec
Q 002884 797 KN---RCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 797 ~~---rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.. .-....+|.++.|+|||||.|++..
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 10 0001147889999999999999963
No 402
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.81 E-value=3.8e-06 Score=84.25 Aligned_cols=125 Identities=11% Similarity=0.071 Sum_probs=76.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc----cceec-cccccccCC-CCc-cchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL----FGIYH-DWCESFSTY-PRS-YDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl----ig~~h-~wce~f~ty-Prt-yDllHa~ 790 (870)
..|||+|||+|+++.+|+..+. -.|+-+|.. ..+..+.++ |+ +-+++ |..+....+ +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3599999999999998666653 246666655 566655543 44 34444 333322233 478 9999987
Q ss_pred cccccccCCcChhhHHHhh--hhcccCCcEEEEecChhhHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 791 HLFSQLKNRCKLVPVMAEV--DRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~Em--DRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
..|. .-....+|-++ -|+|||||.+|+...... +... .-.|.......-....+.+.+|
T Consensus 133 ~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~---~~~~--~~~~~~~~~~~yG~~~~~~~~~ 193 (201)
T 2ift_A 133 PPFH----FNLAEQAISLLCENNWLKPNALIYVETEKDK---PLIT--PENWTLLKEKTTGIVSYRLYQN 193 (201)
T ss_dssp CCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS---CCCC--CTTEEEEEEEEETTEEEEEEEE
T ss_pred CCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCCC---Cccc--cchhHHHHHHhcCCEEEEEEec
Confidence 7754 12456778888 789999999999865543 1111 1246654332223455666555
No 403
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.80 E-value=4e-06 Score=85.17 Aligned_cols=93 Identities=15% Similarity=0.243 Sum_probs=65.3
Q ss_pred ccccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCC--CCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTY--PRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~ty--PrtyDllH 788 (870)
-..|||+|||.|.++.+|+.. +. .|+-++.. ..+..+.++ |+ +-+++ |..+.+... +.+||+|.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEA---TIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTC---EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 457999999999999998765 22 44555554 566665555 55 34444 444433333 57899998
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
++..+. ....+|.++-|+|||||.+|+.+
T Consensus 132 ~~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 132 IDAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred ECCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 865543 45678999999999999999975
No 404
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.79 E-value=3.1e-06 Score=83.23 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=66.2
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc--cceec-cccccccCC-CCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYH-DWCESFSTY-PRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h-~wce~f~ty-PrtyDllHa~~lf 793 (870)
..|||+|||+|.++.+++..+. -.|+-+|.. ..+..+.+ .|+ +-+++ |+.+-...+ +.+||+|-++..|
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 4699999999999997776653 234455543 55555443 354 44444 333332334 4899999987765
Q ss_pred ccccCCcChhhHHHhhhh--cccCCcEEEEecC
Q 002884 794 SQLKNRCKLVPVMAEVDR--IVRPGGKLIVRDE 824 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDR--ILRPgG~~iird~ 824 (870)
.... -.+..+|.++-| +|+|||.|++...
T Consensus 124 ~~~~--~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 124 NVDS--ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp TSCH--HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred Ccch--hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 5321 246678999998 9999999999854
No 405
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.79 E-value=2e-05 Score=81.41 Aligned_cols=111 Identities=17% Similarity=0.205 Sum_probs=69.3
Q ss_pred cccccccccchhHHhhhcCC--------CeEEEEeccCCCCCChhHHHhh-Cccceec-ccccc--ccCCCC-ccchhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL--------QVWVMNVVNVNSPDTLPIIYER-GLFGIYH-DWCES--FSTYPR-SYDLLHA 789 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--------~vwvmNvvp~~~~~tl~~i~eR-Glig~~h-~wce~--f~tyPr-tyDllHa 789 (870)
..|||+|||.|++++.|++. .|+.+-+.|.- +..+... .-+-+++ |..+. +...+. +||+|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~----l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR----CQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT----CCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH----HHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 57999999999999998753 24444443332 2222111 1133444 34332 222233 7999987
Q ss_pred hcccccccCCcChhhHHHhhhh-cccCCcEEEEecCh-----hhHHHHHHHHHcC--CceEE
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDR-IVRPGGKLIVRDEP-----SAVTEVENFLKSL--HWEIL 843 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDR-ILRPgG~~iird~~-----~~~~~~~~~~~~l--~W~~~ 843 (870)
++. + ..+..+|.++.| +|||||++|+.|.. .....+..+++.. ++.+.
T Consensus 159 d~~----~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 159 DNA----H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp ESS----C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred CCc----h--HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 554 1 256779999998 99999999998731 1224677778777 56653
No 406
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.78 E-value=2.2e-06 Score=81.65 Aligned_cols=95 Identities=14% Similarity=0.160 Sum_probs=63.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc-cceec-cccccccCCC---Cccchhhhhcc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL-FGIYH-DWCESFSTYP---RSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl-ig~~h-~wce~f~tyP---rtyDllHa~~l 792 (870)
..|||+|||.|.++.+|...+.- |+-+|.. ..+..+.+ .|+ +-+++ |+.+.+..++ .+||+|.++..
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 46999999999999999887542 6666664 55554443 343 33444 3433222332 38999999887
Q ss_pred cccccCCcChhhHHHhhh--hcccCCcEEEEecCh
Q 002884 793 FSQLKNRCKLVPVMAEVD--RIVRPGGKLIVRDEP 825 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmD--RILRPgG~~iird~~ 825 (870)
|. .....++.++- |+|+|||.+++....
T Consensus 120 ~~-----~~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 120 YA-----MDLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp TT-----SCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred Cc-----hhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 75 23445666666 999999999998543
No 407
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.77 E-value=6.3e-06 Score=87.42 Aligned_cols=115 Identities=10% Similarity=-0.025 Sum_probs=77.1
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhCccceec-cccccc----cCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERGLFGIYH-DWCESF----STYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRGlig~~h-~wce~f----~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||+|.++..|++++. .|+-+|.. .+|..+.++---..++ +|...- ...+.+||+|.++.+|.++
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~ 123 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLINRF 123 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGGGS
T ss_pred CEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhHhC
Confidence 4699999999999999998864 56667765 7888877764222222 343221 1235799999998887654
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecChhh----HHHHHHHHHcCCceE
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEPSA----VTEVENFLKSLHWEI 842 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~~~----~~~~~~~~~~l~W~~ 842 (870)
.. -.+..+|.+|-|+| |||.++++-.... ...++.......|..
T Consensus 124 ~~-~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~ 171 (261)
T 3iv6_A 124 TT-EEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAK 171 (261)
T ss_dssp CH-HHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHH
T ss_pred CH-HHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeee
Confidence 32 24567899999999 9999999843321 233444444444443
No 408
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.76 E-value=6.8e-06 Score=89.59 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=63.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHHHh----hCc---cceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPIIYE----RGL---FGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i~e----RGl---ig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|++.+. -.|+-+|....+..+.+ .|+ +-+++.-.+.+ ++| .+||+|-+..+..
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEWMGY 142 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECCCBT
T ss_pred CEEEEeeccCcHHHHHHHHcCC--CEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcCchh
Confidence 4699999999999999988753 13333443334544433 344 44555433443 456 8999999876533
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLI 820 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~i 820 (870)
.+...-.+..+|.++.|+|||||.+|
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 33333346679999999999999998
No 409
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.74 E-value=7.8e-06 Score=89.22 Aligned_cols=96 Identities=13% Similarity=0.177 Sum_probs=64.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhHHHh----hCc---cceeccccccccCCCCccchhhhhccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPIIYE----RGL---FGIYHDWCESFSTYPRSYDLLHADHLFSQ 795 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~i~e----RGl---ig~~h~wce~f~tyPrtyDllHa~~lfS~ 795 (870)
..|||+|||.|.++..|+..+. -.|+-++....+..+.+ .|+ +-+++.-.+.+ .+|..||+|.+.+++.+
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~-~~~~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEV-SLPEQVDIIISEPMGYM 128 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEEECCCBTT
T ss_pred CEEEEcCCCccHHHHHHHhCCC--CEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhC-CCCCceeEEEEeCchhc
Confidence 4699999999999999987754 12333333334444333 365 44555322332 35688999999888765
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
+.. -.+...|.++.|+|+|||.+|+.
T Consensus 129 ~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 129 LFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp BTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred CCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 543 23556788999999999999965
No 410
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.74 E-value=6.3e-06 Score=83.04 Aligned_cols=128 Identities=18% Similarity=0.135 Sum_probs=77.5
Q ss_pred cccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCC-----Cc
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYP-----RS 783 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyP-----rt 783 (870)
.-++|||+|||.|.++.+|+.. +. .|+-+|.. ..+.++.+ .|+ +-+++ |..+.+..++ .+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3467999999999999999874 22 33334432 44444433 365 33333 3333333332 68
Q ss_pred cchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------hhHHHHHHH----HHcCCceEEEeec
Q 002884 784 YDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------SAVTEVENF----LKSLHWEILFAFS 847 (870)
Q Consensus 784 yDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------~~~~~~~~~----~~~l~W~~~~~~~ 847 (870)
||+|.++.. ......++.++-|+|||||.+|+.+.. .....++.+ ...-++.+.+.
T Consensus 146 ~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-- 217 (229)
T 2avd_A 146 FDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLL-- 217 (229)
T ss_dssp EEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEE--
T ss_pred ccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEE--
Confidence 999887543 234557899999999999999996421 122333433 33444555443
Q ss_pred CCCceEEEEEeC
Q 002884 848 KDQEGVLSAQKG 859 (870)
Q Consensus 848 ~~~e~iL~~~K~ 859 (870)
.-..++++++|.
T Consensus 218 p~~dGl~~~~k~ 229 (229)
T 2avd_A 218 PLGDGLTLAFKI 229 (229)
T ss_dssp CSTTCEEEEEEC
T ss_pred ecCCceEEEEEC
Confidence 234689888873
No 411
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.73 E-value=1.2e-05 Score=86.12 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=71.0
Q ss_pred cccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc
Q 002884 445 IHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM 520 (870)
Q Consensus 445 ~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~ 520 (870)
++++.++++...+. ...++.+|||||||+|.|+.+++.. .|+|+|+...+...+.. ....+...+.+..
T Consensus 73 SRAAfKL~ei~eK~-----~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~--~~~~g~~ii~~~~ 145 (282)
T 3gcz_A 73 SRGSAKLRWMEERG-----YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM--RTTLGWNLIRFKD 145 (282)
T ss_dssp STHHHHHHHHHHTT-----SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEEC
T ss_pred cHHHHHHHHHHHhc-----CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc--cccCCCceEEeeC
Confidence 45555555544443 1246779999999999999988753 68899997643111100 0001222343443
Q ss_pred CcccCCCCCCceeEEEecccccc----cccCh--HHHHHHHHhhcCCC--cEEEEEE
Q 002884 521 GTKRLQFPRNVFDLVHCARCRVP----WHIDG--GKLLLELNRVLRPG--GYFVWSA 569 (870)
Q Consensus 521 dae~LPfpd~SFDlV~Ss~~alh----w~~D~--~~vL~Ei~RVLKPG--G~Lv~S~ 569 (870)
+.....++...+|+|+|.. +.+ +.+.. ..+|.-+.++|+|| |.|++-.
T Consensus 146 ~~dv~~l~~~~~DvVLSDm-ApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv 201 (282)
T 3gcz_A 146 KTDVFNMEVIPGDTLLCDI-GESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV 201 (282)
T ss_dssp SCCGGGSCCCCCSEEEECC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CcchhhcCCCCcCEEEecC-ccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE
Confidence 3333446678899999963 233 22221 13566678999999 9999974
No 412
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.73 E-value=3e-05 Score=81.05 Aligned_cols=117 Identities=12% Similarity=0.113 Sum_probs=75.9
Q ss_pred cccccccccchhHHhhhcCCC-eEEEEeccCCCC-CChhHHHh-------hCc---cceec-ccccccc-----CC-CCc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQ-VWVMNVVNVNSP-DTLPIIYE-------RGL---FGIYH-DWCESFS-----TY-PRS 783 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~-vwvmNvvp~~~~-~tl~~i~e-------RGl---ig~~h-~wce~f~-----ty-Prt 783 (870)
..|||+|||.|.++..|..+. - .+|+-+|.. ..+..+.+ .|+ +-+++ |+.+... .+ +.+
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEK--AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTT--EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CEEEEeCChHhHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 469999999999999887652 1 245555543 44444333 333 44555 3333211 24 479
Q ss_pred cchhhhhcccccc---------------cCCcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceE
Q 002884 784 YDLLHADHLFSQL---------------KNRCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEI 842 (870)
Q Consensus 784 yDllHa~~lfS~~---------------~~rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~ 842 (870)
||+|-++--|-.. ...+.+..+|.++-|+|||||+|++--+.+.+..+...++.. |..
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~ 188 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGG 188 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEE
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCc
Confidence 9999997433221 223668889999999999999999887777777777777764 654
No 413
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.72 E-value=2.9e-06 Score=82.23 Aligned_cols=97 Identities=12% Similarity=0.253 Sum_probs=63.0
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHH----hhCc---cceec-cccccccCC---CCccchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIY----ERGL---FGIYH-DWCESFSTY---PRSYDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~----eRGl---ig~~h-~wce~f~ty---PrtyDllHa~ 790 (870)
..|||+|||.|.++.+|...+. ..|+-+|.. ..+..+. ..|+ +-+++ |+.+....+ +.+||+|-++
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 4699999999999998876653 234444443 4444333 3354 44555 455433222 4789999987
Q ss_pred cccccccCCcChhhHHHhh--hhcccCCcEEEEecCh
Q 002884 791 HLFSQLKNRCKLVPVMAEV--DRIVRPGGKLIVRDEP 825 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~Em--DRILRPgG~~iird~~ 825 (870)
..|.. .....++..+ -|+|+|||++++....
T Consensus 124 ~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 124 PPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 76542 2344566666 9999999999998543
No 414
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.72 E-value=2.5e-05 Score=82.20 Aligned_cols=69 Identities=12% Similarity=0.063 Sum_probs=47.3
Q ss_pred CCCCEEEEECCCCchhHHHHhcC-C--EEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCC-----ceeEEE
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER-D--VLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRN-----VFDLVH 536 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r-~--VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~-----SFDlV~ 536 (870)
.++.+|||||||+|.++. |... . |+++|+++.|+..++..... .+...++. +...+++++. ..|.|+
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~---~~~v~~i~~D~~~~~~~~~~~~~~~~~~vv 95 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL---GPKLTIYQQDAMTFNFGELAEKMGQPLRVF 95 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT---GGGEEEECSCGGGCCHHHHHHHHTSCEEEE
T ss_pred CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc---CCceEEEECchhhCCHHHhhcccCCceEEE
Confidence 457799999999999999 7653 6 99999999988766532211 12444444 4566665432 347788
Q ss_pred ec
Q 002884 537 CA 538 (870)
Q Consensus 537 Ss 538 (870)
++
T Consensus 96 sN 97 (252)
T 1qyr_A 96 GN 97 (252)
T ss_dssp EE
T ss_pred EC
Confidence 76
No 415
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.72 E-value=1.7e-05 Score=77.75 Aligned_cols=127 Identities=16% Similarity=0.210 Sum_probs=66.9
Q ss_pred cccccccccchhHHhhhcCC-C------------eEEEEeccCCCCCChhHHHhhCcccee-c-cccccc------cCCC
Q 002884 723 RNVMDMRAVYGGFAAALKDL-Q------------VWVMNVVNVNSPDTLPIIYERGLFGIY-H-DWCESF------STYP 781 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~------------vwvmNvvp~~~~~tl~~i~eRGlig~~-h-~wce~f------~tyP 781 (870)
.+|||+|||.|+++.+|... + |+.+-+.|... + .+ +-.+ + |+...- ..++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~---~-----~~-~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP---L-----EG-ATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC---C-----TT-CEEECSCCTTSHHHHHHHHHHSG
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc---C-----CC-CeEEEeccCCCHHHHHHHHHhcC
Confidence 56999999999999999764 2 44444444211 1 11 1112 1 222110 1134
Q ss_pred -CccchhhhhcccccccC--------CcChhhHHHhhhhcccCCcEEEEecCh-hhHHHHHHHHHcCCceEEEe-----e
Q 002884 782 -RSYDLLHADHLFSQLKN--------RCKLVPVMAEVDRIVRPGGKLIVRDEP-SAVTEVENFLKSLHWEILFA-----F 846 (870)
Q Consensus 782 -rtyDllHa~~lfS~~~~--------rc~~~~vl~EmDRILRPgG~~iird~~-~~~~~~~~~~~~l~W~~~~~-----~ 846 (870)
++||+|-+++.+..... ......+|.++-|+|||||.|++.+-. .....+...++..--.+... .
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~ 174 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASR 174 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC---
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccC
Confidence 68999988654432111 011146899999999999999998432 22234444444331222222 1
Q ss_pred cCCCceEEEEEe
Q 002884 847 SKDQEGVLSAQK 858 (870)
Q Consensus 847 ~~~~e~iL~~~K 858 (870)
....|.+|+|..
T Consensus 175 ~~~~e~~~v~~g 186 (196)
T 2nyu_A 175 KESSEVYFLATQ 186 (196)
T ss_dssp -----EEEEEEE
T ss_pred ccCceEEEEeee
Confidence 123577777764
No 416
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.70 E-value=0.00022 Score=85.33 Aligned_cols=120 Identities=16% Similarity=0.203 Sum_probs=72.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Ccc----ceec-cccccccCCCCccchhhhhcc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLF----GIYH-DWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gli----g~~h-~wce~f~tyPrtyDllHa~~l 792 (870)
..|||+|||+|+|+.+++..+. -.|+-+|.. ..|..+.+. |+- -+++ |..+-+.....+||+|-++--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 4699999999999998877654 234455554 455554432 442 2333 333322233579999987653
Q ss_pred -ccccc-------CCcChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEEE
Q 002884 793 -FSQLK-------NRCKLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 793 -fS~~~-------~rc~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~ 844 (870)
|+..+ ..-....++.++-|+|+|||++++.-...........+....++...
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~ 678 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQE 678 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceee
Confidence 22111 11234578899999999999999986553222224555666666443
No 417
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.70 E-value=8.6e-06 Score=88.10 Aligned_cols=124 Identities=12% Similarity=0.038 Sum_probs=76.5
Q ss_pred cccccccccchhHHhhhc-C-CCeEEEEeccCCCC-CChhHHHhh----CccceeccccccccCCC-Cccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALK-D-LQVWVMNVVNVNSP-DTLPIIYER----GLFGIYHDWCESFSTYP-RSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~-~-~~vwvmNvvp~~~~-~tl~~i~eR----Glig~~h~wce~f~tyP-rtyDllHa~~lfS 794 (870)
..|||+|||.|++++.+. . .+. .|+-+|.. ..+..+.++ |+ .-+.-.|.....+| .+||+|.+.++
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCC--
Confidence 569999999999886653 2 233 34444543 556555544 77 33333344444455 89999976444
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecChhhHH----HH-HHHHHcCCceEEEeecC---CCceEEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPSAVT----EV-ENFLKSLHWEILFAFSK---DQEGVLSAQK 858 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~~~~~----~~-~~~~~~l~W~~~~~~~~---~~e~iL~~~K 858 (870)
--....++-|+-|+|||||.|++++...... .+ ....+ .|+.....+. ....|.+++|
T Consensus 198 ----~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k 263 (298)
T 3fpf_A 198 ----AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFK 263 (298)
T ss_dssp ----CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEE
T ss_pred ----ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEc
Confidence 1245689999999999999999997432210 00 11222 6766554332 2456888888
No 418
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.70 E-value=1.2e-05 Score=80.50 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=71.6
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHH--------hhCc--cceeccccccccCCC-Cccchhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIY--------ERGL--FGIYHDWCESFSTYP-RSYDLLH 788 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~--------eRGl--ig~~h~wce~f~tyP-rtyDllH 788 (870)
..|||+|||.|.++.+|+.. +. .|+-+|.. ..|..+. .+|+ +-+++.-.+.++ ++ .+ |.++
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v~ 103 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR---LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GELH 103 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE---EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEEE
Confidence 45999999999999999876 33 45555554 5555421 3454 233343334433 44 44 6655
Q ss_pred hhccccccc----CCcChhhHHHhhhhcccCCcEEEEecC-------------------hhhHHHHHHHHHcCCceEEEe
Q 002884 789 ADHLFSQLK----NRCKLVPVMAEVDRIVRPGGKLIVRDE-------------------PSAVTEVENFLKSLHWEILFA 845 (870)
Q Consensus 789 a~~lfS~~~----~rc~~~~vl~EmDRILRPgG~~iird~-------------------~~~~~~~~~~~~~l~W~~~~~ 845 (870)
. +|+... ..-+...+|-+|-|+|||||.|+|... ......+..++..-.|++...
T Consensus 104 ~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~ 181 (218)
T 3mq2_A 104 V--LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADC 181 (218)
T ss_dssp E--ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEE
T ss_pred E--EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceee
Confidence 2 222100 001226799999999999999999621 112345888888899988643
No 419
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.70 E-value=8.9e-06 Score=88.41 Aligned_cols=130 Identities=12% Similarity=0.097 Sum_probs=78.8
Q ss_pred cccccccccchhHHhhhcCCC-eEEEEeccCCCC-CChhHHHh----hCccceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQ-VWVMNVVNVNSP-DTLPIIYE----RGLFGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~-vwvmNvvp~~~~-~tl~~i~e----RGlig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||+|.++.+|.... -+ .|+-+|.. ..+..+.+ .|+-..++ ++..+...+.+||+|.++..|...
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~--~v~~vD~s~~~l~~a~~~~~~~~~~~~~~-~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI--RLTLCDVSAPAVEASRATLAANGVEGEVF-ASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC--BCEEEESBHHHHHHHHHHHHHTTCCCEEE-ECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCC--EEEEEECCHHHHHHHHHHHHHhCCCCEEE-EccccccccCCeeEEEECCCcccC
Confidence 469999999999999997652 11 33344443 34444433 35432221 222222226899999998887642
Q ss_pred c--CCcChhhHHHhhhhcccCCcEEEEecCh--hhHHHHHHHHHcCCceEEEeecCCCceEEEEEeC
Q 002884 797 K--NRCKLVPVMAEVDRIVRPGGKLIVRDEP--SAVTEVENFLKSLHWEILFAFSKDQEGVLSAQKG 859 (870)
Q Consensus 797 ~--~rc~~~~vl~EmDRILRPgG~~iird~~--~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K~ 859 (870)
. ..-....+|.++-|+|||||.++|.... .....++.++.. + .......+-+|+.+.|.
T Consensus 275 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~--~--~~~~~~~gf~v~~~~k~ 337 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGF--H--EVIAQTGRFKVYRAIMT 337 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSC--C--EEEEECSSEEEEEEEC-
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCc--e--EEEeeCCCEEEEEEEeC
Confidence 1 1123567999999999999999997533 234455555543 2 22234556778877763
No 420
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.70 E-value=1.2e-05 Score=81.84 Aligned_cols=130 Identities=12% Similarity=0.143 Sum_probs=73.4
Q ss_pred cccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhhCccceec-ccccc--ccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYERGLFGIYH-DWCES--FSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eRGlig~~h-~wce~--f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|++. .|+.+-+.|......+..+..+.-+-+++ |..+. ++..+.+||+|.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC--
Confidence 46999999999999999765 23333222210011333444433233333 44432 2223478999988433
Q ss_pred cccCCcCh-hhHHHhhhhcccCCcEEEEecChhh----------HHHHHHHHHcCCceEEEeec-C---CCceEEEEEe
Q 002884 795 QLKNRCKL-VPVMAEVDRIVRPGGKLIVRDEPSA----------VTEVENFLKSLHWEILFAFS-K---DQEGVLSAQK 858 (870)
Q Consensus 795 ~~~~rc~~-~~vl~EmDRILRPgG~~iird~~~~----------~~~~~~~~~~l~W~~~~~~~-~---~~e~iL~~~K 858 (870)
.... ..++.++-|+|||||.+++.-.... ......++....|++..... . ...-+++++|
T Consensus 157 ----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~~ 231 (233)
T 2ipx_A 157 ----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVY 231 (233)
T ss_dssp ----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEEEE
T ss_pred ----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEEEe
Confidence 1222 3457789999999999999633211 22224666777787754211 1 2345666665
No 421
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.70 E-value=1.1e-05 Score=82.89 Aligned_cols=96 Identities=13% Similarity=0.074 Sum_probs=55.3
Q ss_pred cccccccccchhHHhhhc--CCCeEEEEeccCCCC--CChhHH---H----hhCccc--eeccccccccC-CCCccchhh
Q 002884 723 RNVMDMRAVYGGFAAALK--DLQVWVMNVVNVNSP--DTLPII---Y----ERGLFG--IYHDWCESFST-YPRSYDLLH 788 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~--~~~vwvmNvvp~~~~--~tl~~i---~----eRGlig--~~h~wce~f~t-yPrtyDllH 788 (870)
..|||+|||.|.++.+|+ ..+. +|+-+|.. ..|.++ . .+|+.. .++.-.+.++. +...+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~---~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNT---FYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTE---EEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 459999999999999998 3343 55556654 344443 2 346533 33333333321 113344444
Q ss_pred hhccccc--ccCCcChhhHHHhhhhcccCCcEEEE
Q 002884 789 ADHLFSQ--LKNRCKLVPVMAEVDRIVRPGGKLIV 821 (870)
Q Consensus 789 a~~lfS~--~~~rc~~~~vl~EmDRILRPgG~~ii 821 (870)
+...+.. ...+-....+|.||-|+|||||.|+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 3211111 11112335689999999999999999
No 422
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.69 E-value=1e-05 Score=82.77 Aligned_cols=128 Identities=13% Similarity=0.153 Sum_probs=76.8
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCC---------
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTY--------- 780 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~ty--------- 780 (870)
-.+|||+|||.|.++..|+.. +. .|+-+|.. ..+..+.++ |+ +-+++ |..+.+..+
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 457999999999999998764 22 33334433 444444443 55 33333 233322212
Q ss_pred ------C-CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------hhHHHHH----HHHHc
Q 002884 781 ------P-RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------SAVTEVE----NFLKS 837 (870)
Q Consensus 781 ------P-rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------~~~~~~~----~~~~~ 837 (870)
+ .+||+|.+++.. -.+..+|.++-|+|||||.+|+.+.. .....++ .+...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADK------ENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYND 211 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHC
T ss_pred cccccCCCCCcCEEEEeCCH------HHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhC
Confidence 2 689999775332 23457889999999999999997621 1222333 33444
Q ss_pred CCceEEEeecCCCceEEEEEeCC
Q 002884 838 LHWEILFAFSKDQEGVLSAQKGN 860 (870)
Q Consensus 838 l~W~~~~~~~~~~e~iL~~~K~~ 860 (870)
-++.+... .-..++.+++|.+
T Consensus 212 ~~~~~~~~--p~~~g~~~~~~~~ 232 (239)
T 2hnk_A 212 SLVDVSLV--PIADGVSLVRKRL 232 (239)
T ss_dssp TTEEEEEE--CSTTCEEEEEECC
T ss_pred CCeEEEEE--EcCCceEeeeehh
Confidence 45555443 2246799999875
No 423
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.69 E-value=2e-05 Score=83.86 Aligned_cols=129 Identities=12% Similarity=0.223 Sum_probs=84.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCCCcc---chhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYPRSY---DLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyPrty---DllHa~ 790 (870)
..|||+|||.|.++.+|+..+- .+|+-+|.. ..+.++.+ .|+ +-+++ ||.+.+ +.+| |+|-++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~---~~~f~~~D~Ivsn 199 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF---KEKFASIEMILSN 199 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG---GGGTTTCCEEEEC
T ss_pred CEEEEEeCchhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc---ccccCCCCEEEEc
Confidence 4699999999999999986632 245555544 55555443 365 44554 566543 4678 998876
Q ss_pred cccccc----------c------CCcChhhHHHhhh-hcccCCcEEEEecChhhHHHHHHHHHcCCceEEEeecCCCceE
Q 002884 791 HLFSQL----------K------NRCKLVPVMAEVD-RIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILFAFSKDQEGV 853 (870)
Q Consensus 791 ~lfS~~----------~------~rc~~~~vl~EmD-RILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~~~~~~~e~i 853 (870)
--+... . ..++-..++.++- |+|+|||++++.-..+....+..+++.. ....|-.+.+++
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~g~~R~ 276 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSAGKYRF 276 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTTSSEEE
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccCCCceE
Confidence 211110 0 1122236889999 9999999999986666667777777765 223355667888
Q ss_pred EEEEeC
Q 002884 854 LSAQKG 859 (870)
Q Consensus 854 L~~~K~ 859 (870)
+++.++
T Consensus 277 ~~~~~k 282 (284)
T 1nv8_A 277 LLLNRR 282 (284)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 888775
No 424
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.68 E-value=2.6e-05 Score=80.57 Aligned_cols=98 Identities=11% Similarity=0.176 Sum_probs=61.7
Q ss_pred cccccccccchhHHhhhcCC-C--e--EEEEeccC--CCCCChhHHHhh----Cc---cceec-c-ccccccCCC-Cccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-Q--V--WVMNVVNV--NSPDTLPIIYER----GL---FGIYH-D-WCESFSTYP-RSYD 785 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~--v--wvmNvvp~--~~~~tl~~i~eR----Gl---ig~~h-~-wce~f~tyP-rtyD 785 (870)
..|||+|||.|.++..|.+. + . ..+-+.|. ..+..+..+.++ |+ +-+++ | +...-.+|| .+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 56999999999999999865 2 3 33322222 112366665544 43 33333 2 322223454 8999
Q ss_pred hhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 786 LLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 786 llHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+|++.++|.+... ...++-.+.++|+|||++++.+
T Consensus 125 ~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 125 RVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp EEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 9999988876543 3445555566666799999974
No 425
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.68 E-value=1.1e-05 Score=82.57 Aligned_cols=128 Identities=13% Similarity=0.081 Sum_probs=79.8
Q ss_pred ccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHH----HhhCcc----ceec-cccccccCC-CCccchhhh
Q 002884 724 NVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPII----YERGLF----GIYH-DWCESFSTY-PRSYDLLHA 789 (870)
Q Consensus 724 nvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i----~eRGli----g~~h-~wce~f~ty-PrtyDllHa 789 (870)
+|||+|||.|.++.+|+.. +. .|+-+|.. ..+.++ ...|+- -+++ |..+-+..+ +.+||+|.+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 7999999999999988752 22 23334433 333333 233543 3333 333444455 489999977
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------hhHHHHHHHHHcCCceEE--EeecCCCceEEE
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------SAVTEVENFLKSLHWEIL--FAFSKDQEGVLS 855 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------~~~~~~~~~~~~l~W~~~--~~~~~~~e~iL~ 855 (870)
+... -....++-++-|+|||||++++.|-. .....++.+...|++.-+ ...-.-.+++++
T Consensus 136 d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~ 209 (221)
T 3dr5_A 136 QVSP------MDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTV 209 (221)
T ss_dssp CCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEE
T ss_pred cCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHH
Confidence 5432 23456889999999999999997532 112355666666666522 222334678999
Q ss_pred EEeCC
Q 002884 856 AQKGN 860 (870)
Q Consensus 856 ~~K~~ 860 (870)
++|.+
T Consensus 210 ~~~~~ 214 (221)
T 3dr5_A 210 VTKAL 214 (221)
T ss_dssp EEECC
T ss_pred HHHHH
Confidence 99976
No 426
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.68 E-value=1.1e-05 Score=82.97 Aligned_cols=115 Identities=12% Similarity=0.197 Sum_probs=70.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh------------Cc--cceec-cccccccC-CC-Ccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER------------GL--FGIYH-DWCESFST-YP-RSY 784 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR------------Gl--ig~~h-~wce~f~t-yP-rty 784 (870)
..|||+|||+|+|+.+|+...- -.+|+-+|.. ..+..+.++ |+ +-+++ |..+.+.. ++ .+|
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 4699999999999999976521 0245555544 455554432 65 23333 33332332 43 678
Q ss_pred chhhhhcccccc-------cCCcChhhHHHhhhhcccCCcEEEE-ecChhhHHHHHHHHHcCCc
Q 002884 785 DLLHADHLFSQL-------KNRCKLVPVMAEVDRIVRPGGKLIV-RDEPSAVTEVENFLKSLHW 840 (870)
Q Consensus 785 DllHa~~lfS~~-------~~rc~~~~vl~EmDRILRPgG~~ii-rd~~~~~~~~~~~~~~l~W 840 (870)
|.|.. +|..- +.|.-...+|.++-|+|+|||.|++ +|.....+.+...+....|
T Consensus 130 d~v~~--~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 130 SKMFF--CFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEE--ESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred CEEEE--ECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 87653 22211 1122225799999999999999988 5776666777766666554
No 427
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.68 E-value=2.5e-06 Score=90.42 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=56.3
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC---CChhHHHhhCc-cceeccccccccCC-CCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP---DTLPIIYERGL-FGIYHDWCESFSTY-PRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~---~tl~~i~eRGl-ig~~h~wce~f~ty-PrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|+|+..|++. .|+-+-+.|.... ..+. ....|. +-+++. +..+..+ +.+||+|.|+..+...
T Consensus 76 ~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~-~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd~~~~~~ 153 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRI-TESYGWNIVKFKS-RVDIHTLPVERTDVIMCDVGESSP 153 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCC-CCBTTGGGEEEEC-SCCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhh-hhccCCCeEEEec-ccCHhHCCCCCCcEEEEeCcccCC
Confidence 46999999999999998876 5666666663110 1000 000111 112210 1122223 5899999987552211
Q ss_pred cC----CcChhhHHHhhhhcccCCc--EEEEec
Q 002884 797 KN----RCKLVPVMAEVDRIVRPGG--KLIVRD 823 (870)
Q Consensus 797 ~~----rc~~~~vl~EmDRILRPgG--~~iird 823 (870)
.. .-.+ .+|-++.|+||||| .|++..
T Consensus 154 ~~~~d~~~~l-~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 154 KWSVESERTI-KILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp CHHHHHHHHH-HHHHHHHHHHHHCTTCEEEEEE
T ss_pred ccchhHHHHH-HHHHHHHHHhccCCCeEEEEEe
Confidence 10 0011 27888999999999 999863
No 428
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.68 E-value=1.5e-06 Score=88.44 Aligned_cols=94 Identities=12% Similarity=0.095 Sum_probs=64.8
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc---cceeccccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYHDWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|+++.+|+..+. .|+-+|.. ..+..+.+ .|+ +-+++.-.+.+. -+.+||+|.++..|.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM---RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CEEEECccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 5699999999999999998863 55566654 55555443 354 344442222222 347999999988877
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
.... ....+.++-|+|+|||++|+..
T Consensus 156 ~~~~---~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GPDY---ATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SGGG---GGSSSBCTTTSCSSCHHHHHHH
T ss_pred Ccch---hhhHHHHHHhhcCCcceeHHHH
Confidence 5432 2236779999999999988774
No 429
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.68 E-value=5.5e-05 Score=89.90 Aligned_cols=114 Identities=13% Similarity=0.083 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhhhhhc-CCCCCEEEEECCCCchhHH----HH--hc---------C--CEEEEeCChhhHHHHHHHHHHH
Q 002884 449 LHYIDFIQQAVPKIAW-GKYTRVSLDVGCGVASFGG----YL--FE---------R--DVLTMSFAPKDEHDAQIQFALE 510 (870)
Q Consensus 449 ~~Yid~L~~~Lp~i~~-g~~~~~VLDIGCGtG~~a~----~L--a~---------r--~VtgVDiSp~ml~~A~vq~A~e 510 (870)
..|.+.|...+..+.. +.....|||||||+|-+.. +. ++ . +|++||-++......+....
T Consensus 390 ~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-- 467 (745)
T 3ua3_A 390 DVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-- 467 (745)
T ss_dssp HHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh--
Confidence 3455555555443321 1234589999999997742 11 22 2 89999999965544343332
Q ss_pred cCCC-cEEEE-cCcccCCCC-----CCceeEEEecccccccc---cChHHHHHHHHhhcCCCcEEE
Q 002884 511 RGIP-AISAV-MGTKRLQFP-----RNVFDLVHCARCRVPWH---IDGGKLLLELNRVLRPGGYFV 566 (870)
Q Consensus 511 rgl~-~~~~v-~dae~LPfp-----d~SFDlV~Ss~~alhw~---~D~~~vL~Ei~RVLKPGG~Lv 566 (870)
.+.. .+.++ .+.+.+.+| .+.+|+|+|-. +... +-...+|..+.|.|||||+++
T Consensus 468 Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 468 RTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCeEEEEeCchhhcccccccCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3433 23344 445666553 46799999953 2222 122578888899999999987
No 430
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.67 E-value=7.8e-05 Score=79.62 Aligned_cols=69 Identities=9% Similarity=0.023 Sum_probs=49.6
Q ss_pred CCCCEEEEECCCCchhHHHHhcC--C----EEEEeCChhhHHHHHHHHHHHcCCCcEEEEcCcccCCCCCC------cee
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER--D----VLTMSFAPKDEHDAQIQFALERGIPAISAVMGTKRLQFPRN------VFD 533 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r--~----VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~dae~LPfpd~------SFD 533 (870)
.++.+|||||||+|.++..|+.+ . |+++|+++.|+..++.. . .....+...+...+++++- ..+
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~~D~~~~~~~~~~~~~~~~~~ 116 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHAGDALTFDFGSIARPGDEPSL 116 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEESCGGGCCGGGGSCSSSSCCE
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEECChhcCChhHhcccccCCce
Confidence 45789999999999999999874 5 99999999999888754 2 2123344455677776532 234
Q ss_pred EEEec
Q 002884 534 LVHCA 538 (870)
Q Consensus 534 lV~Ss 538 (870)
.|++|
T Consensus 117 ~vv~N 121 (279)
T 3uzu_A 117 RIIGN 121 (279)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 66666
No 431
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.66 E-value=1.7e-05 Score=82.78 Aligned_cols=132 Identities=11% Similarity=0.113 Sum_probs=73.5
Q ss_pred cccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhh-Cccceeccccccc--cCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYER-GLFGIYHDWCESF--STYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eR-Glig~~h~wce~f--~tyPrtyDllHa~~lfS 794 (870)
-.|||+|||.|+++..|++. .|+.+-+.|.-....+..+.+| ++..+..|-.... ...+..||+|.++..+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 45999999999999888764 2444333222100112333344 3444444544321 1224689998876432
Q ss_pred cccCCcChhhHHH-hhhhcccCCcEEEEec----------ChhhHHHHHHHHHcCCceEEEe-ec---CCCceEEEEEeC
Q 002884 795 QLKNRCKLVPVMA-EVDRIVRPGGKLIVRD----------EPSAVTEVENFLKSLHWEILFA-FS---KDQEGVLSAQKG 859 (870)
Q Consensus 795 ~~~~rc~~~~vl~-EmDRILRPgG~~iird----------~~~~~~~~~~~~~~l~W~~~~~-~~---~~~e~iL~~~K~ 859 (870)
.....+|+ .+.|+|||||.|++.- +.++...+...++.-..++.-. .- +...-+++++|+
T Consensus 157 -----~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 157 -----PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp -----TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred -----hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 34445555 4566999999999862 2223334444555445554432 11 235678888886
Q ss_pred C
Q 002884 860 N 860 (870)
Q Consensus 860 ~ 860 (870)
+
T Consensus 232 ~ 232 (232)
T 3id6_C 232 G 232 (232)
T ss_dssp -
T ss_pred C
Confidence 3
No 432
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.66 E-value=5e-05 Score=79.60 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=73.9
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh-----Cc--cceec-cccccccCCC-Cccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER-----GL--FGIYH-DWCESFSTYP-RSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR-----Gl--ig~~h-~wce~f~tyP-rtyDllH 788 (870)
-..|||+|||.|+++..|++. +. .|+-+|.. ..+..+.++ |+ +-+++ |+.+ .+| .+||+|-
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD~Vi 184 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYDAVI 184 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEEEEE
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCccEEE
Confidence 357999999999999999865 33 44455553 555555554 53 23333 4444 344 6899987
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecChh-hHHHHHHHHHcCCceEE
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS-AVTEVENFLKSLHWEIL 843 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~-~~~~~~~~~~~l~W~~~ 843 (870)
++ --....+|-++-|+|||||.+++..... ....+...+....|...
T Consensus 185 ~~--------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 185 AD--------IPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp EC--------CSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEE
T ss_pred Ec--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEE
Confidence 61 1234578999999999999999987654 55667677777767654
No 433
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.66 E-value=1.1e-05 Score=82.58 Aligned_cols=127 Identities=13% Similarity=0.169 Sum_probs=76.7
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHh----hCc---cceec-cccccccCCC-----Ccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYE----RGL---FGIYH-DWCESFSTYP-----RSY 784 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~e----RGl---ig~~h-~wce~f~tyP-----rty 784 (870)
-++|||+|||.|.++.+|+.. +. .|+-+|.. ..+.++.+ .|+ |-+++ +..+.+..+| .+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 457999999999999999865 22 23333332 44444433 365 33333 3333333332 789
Q ss_pred chhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh------------hhHHHHHHHHH----cCCceEEEeecC
Q 002884 785 DLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP------------SAVTEVENFLK----SLHWEILFAFSK 848 (870)
Q Consensus 785 DllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~------------~~~~~~~~~~~----~l~W~~~~~~~~ 848 (870)
|+|.+++.. -....+|-++-|+|||||++|+.+.. .....++.+.. .-++...+. .
T Consensus 150 D~V~~d~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l--p 221 (232)
T 3cbg_A 150 DLIFIDADK------RNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVI--P 221 (232)
T ss_dssp EEEEECSCG------GGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEE--C
T ss_pred CEEEECCCH------HHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEE--E
Confidence 999875431 24457899999999999999996422 12234444443 345555443 2
Q ss_pred CCceEEEEEeC
Q 002884 849 DQEGVLSAQKG 859 (870)
Q Consensus 849 ~~e~iL~~~K~ 859 (870)
-.+++.+++|.
T Consensus 222 ~~dG~~~~~~~ 232 (232)
T 3cbg_A 222 LGDGMTLALKK 232 (232)
T ss_dssp SBTCEEEEEEC
T ss_pred cCCeEEEEEeC
Confidence 24678888874
No 434
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.66 E-value=5.6e-06 Score=82.31 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=61.6
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc--cceec-cccccccCCCCccchhhhhccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL--FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
-..|||+|||.|.++..|.+.+. +|+-+|.. ..+..+.++ |+ +-+++ |+.+. ..-+.+||+|.+++.+
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQ---HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG-WQARAPFDAIIVTAAP 153 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC-CGGGCCEEEEEESSBC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC---EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC-CccCCCccEEEEccch
Confidence 35699999999999999987743 44445543 555555544 54 33344 33332 2224799999997766
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.... -++-|+|||||++|+.-..
T Consensus 154 ~~~~---------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 154 PEIP---------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSCC---------THHHHTEEEEEEEEEEECS
T ss_pred hhhh---------HHHHHhcccCcEEEEEEcC
Confidence 5433 2678999999999998654
No 435
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.65 E-value=2.5e-05 Score=75.71 Aligned_cols=124 Identities=13% Similarity=0.127 Sum_probs=80.4
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC--ccceeccccccccC--C-CCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG--LFGIYHDWCESFST--Y-PRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG--lig~~h~wce~f~t--y-PrtyDllHa~~lfS~~ 796 (870)
..|||++||.. . +|.. .+|..+.+|- -+-+++.=.+.++. | +.+||+|.+..+|...
T Consensus 14 ~~vL~~~~g~v----------------~-vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~ 76 (176)
T 2ld4_A 14 QFVAVVWDKSS----------------P-VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGST 76 (176)
T ss_dssp SEEEEEECTTS----------------C-HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCC
T ss_pred CEEEEecCCce----------------e-eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhc
Confidence 55899998851 1 4433 5666666653 23344433344444 3 4899999997777654
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecChhh----------HHHHHHHHHcCCceEEEeecC----C-------------
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEPSA----------VTEVENFLKSLHWEILFAFSK----D------------- 849 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~~~----------~~~~~~~~~~l~W~~~~~~~~----~------------- 849 (870)
. .+...+|-|+-|+|||||+|++.++... ...+...++.-.+ +.+.... .
T Consensus 77 ~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~~~~g~ 153 (176)
T 2ld4_A 77 T--LHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVREHLGH 153 (176)
T ss_dssp C--CCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHHHHTCC
T ss_pred c--cCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHHHHhcc
Confidence 1 2457899999999999999999754321 5677788887777 4433110 0
Q ss_pred --C---ceEEEEEeCCCCCCCC
Q 002884 850 --Q---EGVLSAQKGNWQPDTY 866 (870)
Q Consensus 850 --~---e~iL~~~K~~w~~~~~ 866 (870)
. -.+++++|+-|..+++
T Consensus 154 ~~~~~~~~~~~a~Kp~~~~gs~ 175 (176)
T 2ld4_A 154 ESDNLLFVQITGKKPNFEVGSS 175 (176)
T ss_dssp CCSSEEEEEEEEECCCSSCCSC
T ss_pred cCCceEEEEEeccCCcccccCC
Confidence 1 3478999998876654
No 436
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.64 E-value=6.3e-06 Score=83.15 Aligned_cols=90 Identities=14% Similarity=0.158 Sum_probs=62.0
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC----ccceec-cccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG----LFGIYH-DWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG----lig~~h-~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|.++..|.... -+|+-+|.. ..+..+.++. -+-+++ |..+.+ +.+.+||+|.+.+++...
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBSSC
T ss_pred CEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHHHH
Confidence 469999999999999998875 245555544 5666665552 233333 444322 224789999997776532
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.-++-|+|||||.+|+....
T Consensus 148 ---------~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 148 ---------LCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ---------CHHHHHTEEEEEEEEEEECS
T ss_pred ---------HHHHHHHcCCCcEEEEEEcC
Confidence 34789999999999998653
No 437
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.64 E-value=9.4e-06 Score=85.64 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=50.9
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCCh-------hhHHHHHHHHHHHcCCCc-EEEEc-Cccc-CC-CCC--Cc
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAP-------KDEHDAQIQFALERGIPA-ISAVM-GTKR-LQ-FPR--NV 531 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp-------~ml~~A~vq~A~ergl~~-~~~v~-dae~-LP-fpd--~S 531 (870)
++.+|||+|||+|.++..|+.. .|+++|+++ .++..|+.. +...++.. +.++. +... ++ +++ ++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n-~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLN-PETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHS-HHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhH-HHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 4679999999999999988865 899999999 777766533 22223322 44444 4333 33 444 78
Q ss_pred eeEEEeccc
Q 002884 532 FDLVHCARC 540 (870)
Q Consensus 532 FDlV~Ss~~ 540 (870)
||+|++...
T Consensus 162 fD~V~~dP~ 170 (258)
T 2r6z_A 162 PDIVYLDPM 170 (258)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999999753
No 438
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.64 E-value=0.00012 Score=86.52 Aligned_cols=95 Identities=11% Similarity=0.043 Sum_probs=61.2
Q ss_pred CCCEEEEECCCCchhHHHH---hcC-----CEEEEeCChhhHHHHHHHHHHHcCCC-cEEEEcC-cccCCCCCCceeEEE
Q 002884 467 YTRVSLDVGCGVASFGGYL---FER-----DVLTMSFAPKDEHDAQIQFALERGIP-AISAVMG-TKRLQFPRNVFDLVH 536 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~L---a~r-----~VtgVDiSp~ml~~A~vq~A~ergl~-~~~~v~d-ae~LPfpd~SFDlV~ 536 (870)
...+|||||||+|-+.... ..+ +|++|+-++. ...+.. .....+.. .+.++.+ .+.+.+| +.+|+|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~-~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLE-NWQFEEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHH-HHHHHTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHH-HHHhccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 3458999999999763222 222 6899999984 444443 33444443 3444444 5666655 5699999
Q ss_pred ec---ccccccccChHHHHHHHHhhcCCCcEEE
Q 002884 537 CA---RCRVPWHIDGGKLLLELNRVLRPGGYFV 566 (870)
Q Consensus 537 Ss---~~alhw~~D~~~vL~Ei~RVLKPGG~Lv 566 (870)
|= .+++. +--..+|....|.|||||.++
T Consensus 434 SEwMG~fLl~--E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADN--ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGG--GCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccc--cCCHHHHHHHHHhcCCCcEEc
Confidence 83 12122 223468888899999999987
No 439
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.63 E-value=2e-05 Score=79.62 Aligned_cols=126 Identities=10% Similarity=0.190 Sum_probs=71.0
Q ss_pred cccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHh----hCccceec-ccccc--ccCCCCccchhhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYE----RGLFGIYH-DWCES--FSTYPRSYDLLHAD 790 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~e----RGlig~~h-~wce~--f~tyPrtyDllHa~ 790 (870)
..|||+|||.|.++.+|.+. .|+.+-+.| ..+..+.+ +.-+-+++ |..+. +...+.+||+|.++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~----~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP----RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH----HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH----HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 46999999999999998754 233333222 22222211 11122333 44432 12345789998874
Q ss_pred cccccccCCcChhhHHHhhhhcccCCcEEEEecCh---------h-h-HHHHHHHHHcCCceEEEeec----CCCceEEE
Q 002884 791 HLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP---------S-A-VTEVENFLKSLHWEILFAFS----KDQEGVLS 855 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~---------~-~-~~~~~~~~~~l~W~~~~~~~----~~~e~iL~ 855 (870)
.. ..-....+|.++-|+|||||++++.-.. . + ...+..+ ..- +++..... ....-+++
T Consensus 151 ~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~~~~~~~~~~~ 223 (227)
T 1g8a_A 151 VA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLEPYEKDHALFV 223 (227)
T ss_dssp CC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECTTTSSSEEEEE
T ss_pred CC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccCcccCCCEEEE
Confidence 33 1112234599999999999999985211 0 1 2455665 444 77654321 12345777
Q ss_pred EEeC
Q 002884 856 AQKG 859 (870)
Q Consensus 856 ~~K~ 859 (870)
++|+
T Consensus 224 ~~~~ 227 (227)
T 1g8a_A 224 VRKT 227 (227)
T ss_dssp EECC
T ss_pred EEeC
Confidence 7763
No 440
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.62 E-value=2.6e-05 Score=79.97 Aligned_cols=107 Identities=16% Similarity=0.226 Sum_probs=73.4
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Cccc---eec-cccccccCCC-Cccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GLFG---IYH-DWCESFSTYP-RSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Glig---~~h-~wce~f~tyP-rtyDllH 788 (870)
-..|||+|||.|.++.+|+.. .. .|+-+|.. ..+..+.++ |+.. +++ |+.+. +| .+||+|.
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~v~ 167 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG---IEEENVDHVI 167 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC---CCCCSEEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc---cCCCCcCEEE
Confidence 346999999999999999876 33 33444544 555555554 6543 333 45543 44 6899987
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCC--ceE
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLH--WEI 842 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~--W~~ 842 (870)
+ +-.....+|-++-|+|||||.+++..+ .+....+...++... |..
T Consensus 168 ~--------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~ 216 (255)
T 3mb5_A 168 L--------DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMK 216 (255)
T ss_dssp E--------CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSC
T ss_pred E--------CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 6 222445689999999999999998764 455667777777766 643
No 441
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.62 E-value=2.3e-05 Score=80.07 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=72.7
Q ss_pred ccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh-----Cc--cceec-cccccccCCC-Cccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER-----GL--FGIYH-DWCESFSTYP-RSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR-----Gl--ig~~h-~wce~f~tyP-rtyDllH 788 (870)
-..|||+|||.|.++.+|+.. .. +|+-+|.. ..+..+.++ |. +-+++ |+.+. ++| .+||+|.
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v~ 171 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGVA 171 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEEE
Confidence 357999999999999999865 33 34444543 555555554 52 33333 44432 355 6899987
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecChh-hHHHHHHHHHcCCceE
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS-AVTEVENFLKSLHWEI 842 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~~-~~~~~~~~~~~l~W~~ 842 (870)
++ --....+|.++-|+|||||.+++..+.. .+.++...++...|..
T Consensus 172 ~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 172 LD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 62 1234578999999999999999987654 5566666666666654
No 442
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.60 E-value=0.00014 Score=76.29 Aligned_cols=93 Identities=11% Similarity=0.169 Sum_probs=58.7
Q ss_pred CCCCEEEEECCCCchhHHHHhcC---CEEEEeCChhhHHHHHHHHHHHcCCCcEEE-EcCcccCCCCCC--ceeEEEecc
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER---DVLTMSFAPKDEHDAQIQFALERGIPAISA-VMGTKRLQFPRN--VFDLVHCAR 539 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r---~VtgVDiSp~ml~~A~vq~A~ergl~~~~~-v~dae~LPfpd~--SFDlV~Ss~ 539 (870)
.++.+|||||||+|.++..|+++ +|+++|+++.|+..+... ......+ ..+...+++++. .| .|+++
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-----~~~~v~~i~~D~~~~~~~~~~~~~-~vv~N- 102 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-----GDERLEVINEDASKFPFCSLGKEL-KVVGN- 102 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-----CCTTEEEECSCTTTCCGGGSCSSE-EEEEE-
T ss_pred CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-----cCCCeEEEEcchhhCChhHccCCc-EEEEE-
Confidence 35789999999999999999875 799999999987766532 2223344 445677777642 23 56665
Q ss_pred cccccccChHHHHHHHHhhc--CCCcEEEEE
Q 002884 540 CRVPWHIDGGKLLLELNRVL--RPGGYFVWS 568 (870)
Q Consensus 540 ~alhw~~D~~~vL~Ei~RVL--KPGG~Lv~S 568 (870)
++|.. ...++..+.+.. -+.+++++.
T Consensus 103 --lPy~i-~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 103 --LPYNV-ASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp --CCTTT-HHHHHHHHHHTGGGCSEEEEEEE
T ss_pred --Cchhc-cHHHHHHHHhcCCCCceEEEEEe
Confidence 45543 233444444332 344555554
No 443
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.60 E-value=3.2e-05 Score=78.72 Aligned_cols=129 Identities=9% Similarity=0.073 Sum_probs=71.8
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh----Ccccee-ccccccc--cCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER----GLFGIY-HDWCESF--STYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR----Glig~~-h~wce~f--~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|++. +- -.|+-+|.. ..+..+.++ .-+-.+ .|..+.. ..++.+||+|..+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~--- 150 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADK--GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED--- 150 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC---
T ss_pred CEEEEEcccCCHHHHHHHHHcCC--cEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe---
Confidence 46999999999999999765 31 123333433 344333332 112222 2333211 2334789997521
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEe----cChh-------hHHHHHHHHHcCCceEEEeecC----CCceEEEEEe
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVR----DEPS-------AVTEVENFLKSLHWEILFAFSK----DQEGVLSAQK 858 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iir----d~~~-------~~~~~~~~~~~l~W~~~~~~~~----~~e~iL~~~K 858 (870)
....-....+|.++-|+|||||++++. .... ....++ ++....+++.....- ....+++++|
T Consensus 151 --~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 151 --VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp --CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred --cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 111111256799999999999999994 1110 125566 666666765433111 2346788887
Q ss_pred C
Q 002884 859 G 859 (870)
Q Consensus 859 ~ 859 (870)
+
T Consensus 228 ~ 228 (230)
T 1fbn_A 228 E 228 (230)
T ss_dssp C
T ss_pred C
Confidence 3
No 444
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.59 E-value=0.00026 Score=82.26 Aligned_cols=120 Identities=15% Similarity=0.010 Sum_probs=77.2
Q ss_pred HHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhc-------CCEEEEeCChhhHHHHHHHHHHHcCCC--cEEE-Ec
Q 002884 451 YIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFE-------RDVLTMSFAPKDEHDAQIQFALERGIP--AISA-VM 520 (870)
Q Consensus 451 Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~-------r~VtgVDiSp~ml~~A~vq~A~ergl~--~~~~-v~ 520 (870)
..++|.+.+.......++.+|||.+||+|.|...+.. ..++|+|+++.+...|+.... .+|+. ...+ ..
T Consensus 205 Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~-l~gi~~~~~~I~~g 283 (542)
T 3lkd_A 205 VAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI-LHGVPIENQFLHNA 283 (542)
T ss_dssp HHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH-HTTCCGGGEEEEES
T ss_pred HHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH-HcCCCcCccceEec
Confidence 3455555544211123577999999999987765543 279999999998888775544 35652 3333 33
Q ss_pred CcccC--C-CCCCceeEEEecccc-ccccc------C---------------hHHHHHHHHhhcC-CCcEEEEEECC
Q 002884 521 GTKRL--Q-FPRNVFDLVHCARCR-VPWHI------D---------------GGKLLLELNRVLR-PGGYFVWSATP 571 (870)
Q Consensus 521 dae~L--P-fpd~SFDlV~Ss~~a-lhw~~------D---------------~~~vL~Ei~RVLK-PGG~Lv~S~~p 571 (870)
+.... | +....||+|+++.-. ..|.. + .-.++..+.+.|+ |||++.+..+.
T Consensus 284 DtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 284 DTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp CTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred ceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 44333 4 456789999997321 12210 0 1247899999999 99999887443
No 445
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.58 E-value=1.1e-05 Score=90.68 Aligned_cols=110 Identities=12% Similarity=0.222 Sum_probs=72.2
Q ss_pred cccccccccc------chhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhhCccceeccccccccCC------CCcc
Q 002884 722 VRNVMDMRAV------YGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYERGLFGIYHDWCESFSTY------PRSY 784 (870)
Q Consensus 722 ~RnvmDm~ag------~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eRGlig~~h~wce~f~ty------Prty 784 (870)
-.+|||+||| +||.+..|... .|+.+-+.|. +. +...-|-++..=++.+++- +.+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~----m~---~~~~rI~fv~GDa~dlpf~~~l~~~d~sF 289 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDK----SH---VDELRIRTIQGDQNDAEFLDRIARRYGPF 289 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCC----GG---GCBTTEEEEECCTTCHHHHHHHHHHHCCE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHH----Hh---hcCCCcEEEEecccccchhhhhhcccCCc
Confidence 4689999999 78877777543 3444444443 21 1112233444333443322 4799
Q ss_pred chhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecC------------------hhhHHHHHHHHHcCCceE
Q 002884 785 DLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE------------------PSAVTEVENFLKSLHWEI 842 (870)
Q Consensus 785 DllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~------------------~~~~~~~~~~~~~l~W~~ 842 (870)
|+|.+++.. + -......|.|+-|+|||||+|||.|- ..++..++.++..|+|.-
T Consensus 290 DlVisdgsH--~--~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 290 DIVIDDGSH--I--NAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EEEEECSCC--C--HHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred cEEEECCcc--c--chhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 999987532 1 13456789999999999999999752 245789999999998864
No 446
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.58 E-value=1.2e-05 Score=82.92 Aligned_cols=101 Identities=14% Similarity=0.153 Sum_probs=65.5
Q ss_pred cccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh-------Cc-------------------------
Q 002884 723 RNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER-------GL------------------------- 766 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR-------Gl------------------------- 766 (870)
..|||+|||.|.|+..|... +- .+|+-+|.. ..+.++.++ |+
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~--~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSL--RQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGE--EEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccCC--CeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 46999999999999998765 22 356666654 555544421 33
Q ss_pred ---cc-------------eec-cccccccC----CCCccchhhhhcccccccC------CcChhhHHHhhhhcccCCcEE
Q 002884 767 ---FG-------------IYH-DWCESFST----YPRSYDLLHADHLFSQLKN------RCKLVPVMAEVDRIVRPGGKL 819 (870)
Q Consensus 767 ---ig-------------~~h-~wce~f~t----yPrtyDllHa~~lfS~~~~------rc~~~~vl~EmDRILRPgG~~ 819 (870)
+- +++ |+.+.+.. -...||+|-++-.|..... .-....+|.++-|+|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 22 333 55543211 2248999998765543322 122347899999999999999
Q ss_pred EEecCh
Q 002884 820 IVRDEP 825 (870)
Q Consensus 820 iird~~ 825 (870)
+|.+..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 997654
No 447
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.58 E-value=3.3e-05 Score=81.91 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=77.6
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh-----Cc-----------cceec-cccccccCCCCc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER-----GL-----------FGIYH-DWCESFSTYPRS 783 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR-----Gl-----------ig~~h-~wce~f~tyPrt 783 (870)
-++|||+|||.|+++.+|+..++ .+|+-++.. ..+.++.++ |+ +-+++ |..+-+.. +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 36799999999999999988754 344444443 444444433 33 22333 22221222 788
Q ss_pred cchhhhhcccccccCCc-ChhhHHHhhhhcccCCcEEEEec-----ChhhHHHHHHHHHcCCceEEEee----c-CCCce
Q 002884 784 YDLLHADHLFSQLKNRC-KLVPVMAEVDRIVRPGGKLIVRD-----EPSAVTEVENFLKSLHWEILFAF----S-KDQEG 852 (870)
Q Consensus 784 yDllHa~~lfS~~~~rc-~~~~vl~EmDRILRPgG~~iird-----~~~~~~~~~~~~~~l~W~~~~~~----~-~~~e~ 852 (870)
||+|.++.......... ....++-++-|+|+|||.+++.. ....+..+...++..--.+.... . ...-.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~ 232 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWA 232 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEE
Confidence 99998854321111001 12468899999999999999962 22334444444444433333321 1 23456
Q ss_pred EEEEEeC
Q 002884 853 VLSAQKG 859 (870)
Q Consensus 853 iL~~~K~ 859 (870)
+++|.|.
T Consensus 233 ~~~as~~ 239 (281)
T 1mjf_A 233 FLVGVKG 239 (281)
T ss_dssp EEEEEES
T ss_pred EEEeeCC
Confidence 8888886
No 448
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.58 E-value=1.1e-05 Score=83.54 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=61.2
Q ss_pred ccccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhhCc-cceeccccccccCCCCccchhhhhccccccc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYERGL-FGIYHDWCESFSTYPRSYDLLHADHLFSQLK 797 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eRGl-ig~~h~wce~f~tyPrtyDllHa~~lfS~~~ 797 (870)
-..|||+|||.|.++..|.+. +. .|+-+|.. ..+..+.+++- +-++..-.+.++.-+.+||+|.+.+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-----
Confidence 346999999999999999876 43 34445544 67777777762 22222222333322379999987433
Q ss_pred CCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 798 NRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 798 ~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
...|.|+.|+|||||.+++..+
T Consensus 158 -----~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 -----PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp -----CCCHHHHHHHEEEEEEEEEEEE
T ss_pred -----hhhHHHHHHhcCCCcEEEEEEc
Confidence 2368999999999999999864
No 449
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.55 E-value=0.00036 Score=84.12 Aligned_cols=105 Identities=10% Similarity=-0.058 Sum_probs=68.6
Q ss_pred CCCEEEEECCCCchhHHHHhcC-------CEEEEeCChhhHHHHHHHHHHH-----cCCCcEEEEcCc-ccC-CCCCCce
Q 002884 467 YTRVSLDVGCGVASFGGYLFER-------DVLTMSFAPKDEHDAQIQFALE-----RGIPAISAVMGT-KRL-QFPRNVF 532 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r-------~VtgVDiSp~ml~~A~vq~A~e-----rgl~~~~~v~da-e~L-Pfpd~SF 532 (870)
++.+|||.|||+|.++..++.. .++|+|+++.++..|..+.... .++.......++ ..+ +.....|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 4679999999999988877653 5899999999887773333222 233332333332 221 2345789
Q ss_pred eEEEecccccc-ccc--------------------------C-hHHHHHHHHhhcCCCcEEEEEECC
Q 002884 533 DLVHCARCRVP-WHI--------------------------D-GGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 533 DlV~Ss~~alh-w~~--------------------------D-~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
|+|+++.-... +.. + ...++..+.+.|+|||++++..+.
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 99999853211 100 0 124677899999999999988544
No 450
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.55 E-value=0.00014 Score=84.53 Aligned_cols=102 Identities=18% Similarity=0.075 Sum_probs=68.5
Q ss_pred CEEEEECCCCchhHHHHh-------------------cCCEEEEeCChhhHHHHHHHHHHHcCCCcEE--EEcCcccC-C
Q 002884 469 RVSLDVGCGVASFGGYLF-------------------ERDVLTMSFAPKDEHDAQIQFALERGIPAIS--AVMGTKRL-Q 526 (870)
Q Consensus 469 ~~VLDIGCGtG~~a~~La-------------------~r~VtgVDiSp~ml~~A~vq~A~ergl~~~~--~v~dae~L-P 526 (870)
.+|||.+||+|.|...++ ...++|+|+++.++..|...... +|+...+ ...+.... .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-RGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-TTCCCBCCSSSCCTTTSCS
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-hCCCcccceeccchhcCcc
Confidence 499999999998776542 23799999999988888755443 4554332 22232222 3
Q ss_pred CCCCceeEEEeccccc--ccccC--------------------------hHHHHHHHHhhcCCCcEEEEEECC
Q 002884 527 FPRNVFDLVHCARCRV--PWHID--------------------------GGKLLLELNRVLRPGGYFVWSATP 571 (870)
Q Consensus 527 fpd~SFDlV~Ss~~al--hw~~D--------------------------~~~vL~Ei~RVLKPGG~Lv~S~~p 571 (870)
++...||+|+++.-.. .|..+ .-.+|..+.+.|+|||++++..+.
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 5567899999974211 12110 026789999999999999887543
No 451
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.53 E-value=3.1e-05 Score=80.53 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=60.5
Q ss_pred cccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHH----hhCc---cceec-cccccccCC------CC
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIY----ERGL---FGIYH-DWCESFSTY------PR 782 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~----eRGl---ig~~h-~wce~f~ty------Pr 782 (870)
.-++|||+|||.|.++..|+.. +. .|+-+|.. ..+.++. ..|+ |-+++ |..+.+..+ +.
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 3468999999999999888753 22 23333432 3444433 3465 33444 333333333 57
Q ss_pred ccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 783 SYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 783 tyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+||+|.+++-. -....+|-++-|+|||||.+|+.+
T Consensus 156 ~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 156 SYDFIFVDADK------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp CBSEEEECSCS------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CEEEEEEcCch------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 89998775421 245678899999999999999875
No 452
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.52 E-value=3e-05 Score=83.66 Aligned_cols=118 Identities=16% Similarity=0.189 Sum_probs=72.7
Q ss_pred cccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhh----Cc--cceeccccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYER----GL--FGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||||||.|+++.+|++. +- -.|+-+|.. ..+..+.++ |+ +-+++.-...+..++.+||+|.++--.
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pc 197 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPC 197 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCT
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCC
Confidence 46999999999999998753 11 124455554 555555544 65 334443334444456789999875332
Q ss_pred cccc---CC---------cC-------hhhHHHhhhhcccCCcEEEEec----ChhhHHHHHHHHHcCCceE
Q 002884 794 SQLK---NR---------CK-------LVPVMAEVDRIVRPGGKLIVRD----EPSAVTEVENFLKSLHWEI 842 (870)
Q Consensus 794 S~~~---~r---------c~-------~~~vl~EmDRILRPgG~~iird----~~~~~~~~~~~~~~l~W~~ 842 (870)
|... .. -. ...+|.++-|+|||||.+|+.. +.+....++.+++...++.
T Consensus 198 sg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 198 TGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp TSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred CCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 2110 00 00 1378999999999999999953 2344456677777666544
No 453
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.52 E-value=0.00017 Score=77.83 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=70.3
Q ss_pred cccHHHHHHHHHHHhhhhhcCCCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc
Q 002884 445 IHGALHYIDFIQQAVPKIAWGKYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQFALERGIPAISAVM 520 (870)
Q Consensus 445 ~~gA~~Yid~L~~~Lp~i~~g~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~ 520 (870)
++++.++.+...+ . + ..++.+||||||++|.|+.++++. .|+|+|+...+...+.. ....+.+.+.+..
T Consensus 64 SRaa~KL~ei~ek--~-l--~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~ 136 (300)
T 3eld_A 64 SRGAAKIRWLHER--G-Y--LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKD 136 (300)
T ss_dssp STTHHHHHHHHHH--T-S--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEEC
T ss_pred chHHHHHHHHHHh--C-C--CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeec
Confidence 4555555554444 2 1 246889999999999999999974 67888887532100000 0000122333333
Q ss_pred CcccCCCCCCceeEEEeccccccccc----Ch---HHHHHHHHhhcCCC-cEEEEEE
Q 002884 521 GTKRLQFPRNVFDLVHCARCRVPWHI----DG---GKLLLELNRVLRPG-GYFVWSA 569 (870)
Q Consensus 521 dae~LPfpd~SFDlV~Ss~~alhw~~----D~---~~vL~Ei~RVLKPG-G~Lv~S~ 569 (870)
+....-+....||+|+|.. +-+ .. |. ..+|.-+.++|+|| |.|++-.
T Consensus 137 ~~di~~l~~~~~DlVlsD~-APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~Kv 191 (300)
T 3eld_A 137 KSNVFTMPTEPSDTLLCDI-GES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKV 191 (300)
T ss_dssp SCCTTTSCCCCCSEEEECC-CCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEE
T ss_pred CceeeecCCCCcCEEeecC-cCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEe
Confidence 3333345667899999963 233 21 11 24566678999999 9999973
No 454
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.50 E-value=3.4e-05 Score=81.63 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=69.0
Q ss_pred cccccccccccc---hhHHhhhcCC--CeEEEEeccCCC-CCChhHHHhh----Cccceec-cccccc---------cCC
Q 002884 721 NVRNVMDMRAVY---GGFAAALKDL--QVWVMNVVNVNS-PDTLPIIYER----GLFGIYH-DWCESF---------STY 780 (870)
Q Consensus 721 ~~RnvmDm~ag~---GgfaaaL~~~--~vwvmNvvp~~~-~~tl~~i~eR----Glig~~h-~wce~f---------~ty 780 (870)
.++.|||+|||+ |.++..+... +. .|+-+|. +.+|..+.++ +-+.+++ |..+.- ..+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 468899999999 9887666432 22 3455555 3666665554 2333333 333210 134
Q ss_pred C-CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 781 P-RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 781 P-rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
| .+||+|-+.++|-.+... ....+|-++-|+|||||+|+|.+..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEec
Confidence 4 489999888888776654 6778999999999999999999754
No 455
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.48 E-value=0.00013 Score=82.24 Aligned_cols=71 Identities=11% Similarity=-0.010 Sum_probs=53.1
Q ss_pred CCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHc--CCCcEEEEcC-ccc-CCC-CCCceeEEEec
Q 002884 467 YTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALER--GIPAISAVMG-TKR-LQF-PRNVFDLVHCA 538 (870)
Q Consensus 467 ~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~er--gl~~~~~v~d-ae~-LPf-pd~SFDlV~Ss 538 (870)
++.+|||+|||+|.++..|+.. .|+++|+++.++..|+.+. ... |+..+.++.+ ... ++. ++++||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~-~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNI-PLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhH-HHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 3689999999999999988875 8999999999999887544 333 6555555554 333 332 34579999995
No 456
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.47 E-value=5.6e-05 Score=76.72 Aligned_cols=106 Identities=10% Similarity=0.148 Sum_probs=71.2
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCCCCccchhhhhccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~tyPrtyDllHa~~lf 793 (870)
..|||+|||.|.++.+|+..+ ..|+-+|.. ..+..+.++ |+ +-+++ |+.+.+ .-+..||+|-++
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~--- 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVA---GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE-VPEGIFHAAFVD--- 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-CCTTCBSEEEEC---
T ss_pred CEEEEeCCCccHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-cCCCcccEEEEC---
Confidence 469999999999999998763 355666654 566666554 44 33333 344422 013689998761
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEecCh-hhHHHHHHHHHcCCce
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-SAVTEVENFLKSLHWE 841 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird~~-~~~~~~~~~~~~l~W~ 841 (870)
-.....+|.++-|+|||||.+++..+. ..+..+...++.. |.
T Consensus 166 -----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 166 -----VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp -----SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 124557899999999999999998773 4556666666554 54
No 457
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.46 E-value=4.3e-05 Score=92.24 Aligned_cols=101 Identities=14% Similarity=0.183 Sum_probs=71.3
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----------Cc--cceeccccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----------GL--FGIYHDWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----------Gl--ig~~h~wce~f~tyPrtyDllH 788 (870)
-..|||+|||.|.++.+|+..+--.-.|+-+|-. ..+..+.+| |+ +-+++.-.+.++..+.+||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 3569999999999999999875111255566654 666666552 54 4455543444454458999999
Q ss_pred hhcccccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 789 ADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 789 a~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
+.++|.++.. -....+|-+|-|+|||| ++||..+
T Consensus 802 ~~eVLeHL~d-p~l~~~L~eI~RvLKPG-~LIISTP 835 (950)
T 3htx_A 802 CLEVIEHMEE-DQACEFGEKVLSLFHPK-LLIVSTP 835 (950)
T ss_dssp EESCGGGSCH-HHHHHHHHHHHHTTCCS-EEEEEEC
T ss_pred EeCchhhCCh-HHHHHHHHHHHHHcCCC-EEEEEec
Confidence 9988887653 12335889999999999 8888754
No 458
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.46 E-value=2.9e-05 Score=79.99 Aligned_cols=94 Identities=13% Similarity=0.155 Sum_probs=60.4
Q ss_pred cccccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHH----HhhCc---cceec-cccccccCC------CC
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPII----YERGL---FGIYH-DWCESFSTY------PR 782 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i----~eRGl---ig~~h-~wce~f~ty------Pr 782 (870)
.-++|||+|||.|..+.+|+.. +. .|+-+|.. ..+.++ ...|+ |-+++ |..+.+..+ +.
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDG---KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 3568999999999999888653 22 23333332 334433 33466 33443 444433334 47
Q ss_pred ccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 783 SYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 783 tyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+||+|.+++-- -....+|-++-|+|||||.+++.+
T Consensus 147 ~fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 147 SYDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEec
Confidence 89998775321 134578899999999999999975
No 459
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.45 E-value=2.8e-05 Score=77.97 Aligned_cols=126 Identities=10% Similarity=0.051 Sum_probs=75.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----hCc--cceeccccccccCC-CCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYHDWCESFSTY-PRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h~wce~f~ty-PrtyDllHa~~lfS 794 (870)
..|||+|||+|.++.+|+..+. -.|+-+|.. ..+..+.+ .|+ +-+++.-++.+..+ +.+||+|-++..|.
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 4699999999999998766653 256667765 56655543 344 44454322333333 47999998876654
Q ss_pred cccCCcChhhHHHhhh--hcccCCcEEEEecChhhHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 795 QLKNRCKLVPVMAEVD--RIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmD--RILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
. -....+|-++- |+|||||.+++....... +.. ..-.|.......-....+.+.+|
T Consensus 134 ~----~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~~--~~~--~~~~~~~~~~~~~g~~~~~~~~~ 191 (202)
T 2fpo_A 134 R----GLLEETINLLEDNGWLADEALIYVESEVENG--LPT--VPANWSLHREKVAGQVAYRLYQR 191 (202)
T ss_dssp T----TTHHHHHHHHHHTTCEEEEEEEEEEEEGGGC--SCC--CCTTEEEEEEEEETTEEEEEEEE
T ss_pred C----CcHHHHHHHHHhcCccCCCcEEEEEECCCcc--ccc--cCCcceEEeeeccCCEEEEEEEE
Confidence 1 23456777774 579999999998654221 000 01257654432334455666554
No 460
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.44 E-value=8e-06 Score=89.44 Aligned_cols=97 Identities=13% Similarity=0.250 Sum_probs=63.0
Q ss_pred cccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHh-hCccceeccccccccCCCCccchhhhhccccc
Q 002884 719 WSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYE-RGLFGIYHDWCESFSTYPRSYDLLHADHLFSQ 795 (870)
Q Consensus 719 W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~e-RGlig~~h~wce~f~tyPrtyDllHa~~lfS~ 795 (870)
+...+.|||+|||.|.++.+|.+. ++-++ -+|.+..+..+.+ .++--+.+|..+ ++|. ||+|.+.++|-.
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~---~~D~~~~~~~a~~~~~v~~~~~d~~~---~~~~-~D~v~~~~~lh~ 279 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGI---NFDLPQVIENAPPLSGIEHVGGDMFA---SVPQ-GDAMILKAVCHN 279 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHTTCCCCTTEEEEECCTTT---CCCC-EEEEEEESSGGG
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEE---EeChHHHHHhhhhcCCCEEEeCCccc---CCCC-CCEEEEeccccc
Confidence 455678999999999999999765 33222 1121222221111 122223335544 4566 999999888866
Q ss_pred ccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 796 LKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 796 ~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+... ....+|-++-|+|||||.+||.|
T Consensus 280 ~~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 280 WSDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 5431 22379999999999999999985
No 461
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.44 E-value=0.00012 Score=77.58 Aligned_cols=137 Identities=12% Similarity=0.064 Sum_probs=80.3
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceeccccccc-cCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYHDWCESF-STYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h~wce~f-~tyPrtyDllH 788 (870)
-++|||+|||.|+++.+|+.. ++- .|+-++.. ..+.++.+. |+ +-+++.=+..+ ...+.+||+|-
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~--~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVK--KATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCS--EEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCc--eEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 578999999999999999887 552 23333332 344443332 22 33444322222 22358999998
Q ss_pred hhcccccccC-CcChhhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEee------cCCCceEEEE
Q 002884 789 ADHLFSQLKN-RCKLVPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFAF------SKDQEGVLSA 856 (870)
Q Consensus 789 a~~lfS~~~~-rc~~~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~~------~~~~e~iL~~ 856 (870)
++........ ......++-++-|+|+|||.+++... ...+..+...+++.--.+.... ....-.+++|
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~a 233 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIG 233 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEe
Confidence 8543321110 11124688999999999999999732 2334555555555533443321 1234568889
Q ss_pred EeCC
Q 002884 857 QKGN 860 (870)
Q Consensus 857 ~K~~ 860 (870)
.|.+
T Consensus 234 sk~~ 237 (275)
T 1iy9_A 234 SKKY 237 (275)
T ss_dssp ESSC
T ss_pred eCCC
Confidence 9874
No 462
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.44 E-value=1e-05 Score=81.54 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=56.6
Q ss_pred cccccccccchhHHhhhcCC-C--eEEEEeccCCCC-CChhHHHhh----Cc-------cceec-cccccccCCCCccch
Q 002884 723 RNVMDMRAVYGGFAAALKDL-Q--VWVMNVVNVNSP-DTLPIIYER----GL-------FGIYH-DWCESFSTYPRSYDL 786 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~--vwvmNvvp~~~~-~tl~~i~eR----Gl-------ig~~h-~wce~f~tyPrtyDl 786 (870)
..|||+|||.|++++.|... + . .|+-+|.. ..+..+.++ |+ +-+++ |..+. ..-+..||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC-cccCCCcCE
Confidence 46999999999999998754 1 2 33334433 444444332 21 33333 34322 122468999
Q ss_pred hhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 787 LHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 787 lHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
||++..+ ..++-++-|+|||||.+++.-.
T Consensus 155 i~~~~~~---------~~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAA---------PVVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEECSBB---------SSCCHHHHHTEEEEEEEEEEES
T ss_pred EEECCch---------HHHHHHHHHhcCCCcEEEEEEe
Confidence 9986554 2356788999999999999753
No 463
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.43 E-value=8.4e-05 Score=79.54 Aligned_cols=137 Identities=10% Similarity=0.012 Sum_probs=77.5
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceec-cccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYH-DWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h-~wce~f~tyPrtyDllH 788 (870)
-++|||+|||.|+++.+|++. ++ ..|+-+|.. ..+.++.++ |+ +-+++ |..+.+...+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 368999999999999999987 44 244444443 444444332 22 33333 33222233468899998
Q ss_pred hhcccccccCC--cChhhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEee------cCCCceEEE
Q 002884 789 ADHLFSQLKNR--CKLVPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFAF------SKDQEGVLS 855 (870)
Q Consensus 789 a~~lfS~~~~r--c~~~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~~------~~~~e~iL~ 855 (870)
++......... -....++-++-|+|+|||.+++.-. ......+...+++.--.+.... ....-.+++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 75321101100 0125688999999999999999732 2223344444444333343321 123457889
Q ss_pred EEeCC
Q 002884 856 AQKGN 860 (870)
Q Consensus 856 ~~K~~ 860 (870)
|.|.+
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 99874
No 464
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.43 E-value=3e-05 Score=84.57 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=75.0
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc----cceeccccccccCC----CCccchhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL----FGIYHDWCESFSTY----PRSYDLLHA 789 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl----ig~~h~wce~f~ty----PrtyDllHa 789 (870)
..|||+|||+|+|+.+|+..+. .|+-+|.. ..+..+.++ |+ +-+++.-+..+... ..+||+|-+
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 4699999999999999998875 66777765 555555443 54 33444323333322 468999877
Q ss_pred hcc-cccccC------CcChhhHHHhhhhcccCCcEEEEecC-------hhhHHHHHHHHHcCCceEE
Q 002884 790 DHL-FSQLKN------RCKLVPVMAEVDRIVRPGGKLIVRDE-------PSAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 790 ~~l-fS~~~~------rc~~~~vl~EmDRILRPgG~~iird~-------~~~~~~~~~~~~~l~W~~~ 843 (870)
+-- |..... .-.+..+|.++-|+|+|||+|++... ......++..++.+.+++.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 433 221110 01245789999999999999887632 1234555556667777665
No 465
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.43 E-value=7.1e-05 Score=80.33 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=79.6
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhhC----------ccceeccccccccC--CCCccchh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYERG----------LFGIYHDWCESFST--YPRSYDLL 787 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eRG----------lig~~h~wce~f~t--yPrtyDll 787 (870)
-++|||+|||.|+++..|++. ++ ..|+-+|.. ..+.++.++- -+-+++.-...+.. -+.+||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 467999999999999999876 33 233334433 3444443321 13334422222222 25799999
Q ss_pred hhhcccccccCCcC-hhhHHHhhhhcccCCcEEEEecCh-----hhHHHHHHHHHcCCceEEEeec-------CCCceEE
Q 002884 788 HADHLFSQLKNRCK-LVPVMAEVDRIVRPGGKLIVRDEP-----SAVTEVENFLKSLHWEILFAFS-------KDQEGVL 854 (870)
Q Consensus 788 Ha~~lfS~~~~rc~-~~~vl~EmDRILRPgG~~iird~~-----~~~~~~~~~~~~l~W~~~~~~~-------~~~e~iL 854 (870)
-++........... -..++-++-|+|||||.+++.... .....+...++...+.....+. ...-.++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~ 253 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTL 253 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEE
Confidence 88544322111111 146889999999999999996432 3456666777776665432221 2334688
Q ss_pred EEEeC
Q 002884 855 SAQKG 859 (870)
Q Consensus 855 ~~~K~ 859 (870)
+|.|.
T Consensus 254 ~as~~ 258 (304)
T 3bwc_A 254 VCSKK 258 (304)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 88885
No 466
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.42 E-value=7.9e-05 Score=77.92 Aligned_cols=107 Identities=18% Similarity=0.197 Sum_probs=73.9
Q ss_pred cccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh----Cc---cceec-cccccccCCC-Cccchhhh
Q 002884 723 RNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER----GL---FGIYH-DWCESFSTYP-RSYDLLHA 789 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR----Gl---ig~~h-~wce~f~tyP-rtyDllHa 789 (870)
..|||+|||.|.++.+|+.. .. +|+-+|.. ..+..+.++ |+ +-+++ |+++. +| .+||+|-+
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~~ 187 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSG---KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALFL 187 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTC---EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEEE
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEEE
Confidence 46999999999999998765 23 45555653 566665554 54 33333 44443 44 68999876
Q ss_pred hcccccccCCcChhhHHHhhhhcccCCcEEEEecCh-hhHHHHHHHHHcCCceEE
Q 002884 790 DHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-SAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 790 ~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-~~~~~~~~~~~~l~W~~~ 843 (870)
+ --....+|-++-|+|+|||.+++.... ..+..+...++...|...
T Consensus 188 ~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~ 234 (277)
T 1o54_A 188 D--------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRI 234 (277)
T ss_dssp C--------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEE
T ss_pred C--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcee
Confidence 2 123446899999999999999998774 456677777777777653
No 467
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.42 E-value=3.7e-05 Score=81.05 Aligned_cols=111 Identities=12% Similarity=0.091 Sum_probs=68.8
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHh----hCc--cceeccccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYE----RGL--FGIYHDWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~e----RGl--ig~~h~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||+|+|+..|+.. +- ..|+-+|.. ..+..+.+ .|+ +-+++.-++.+ ..+.+||+|-++...
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~--~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKP--KLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--SEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS-
T ss_pred CEEEEecCcCCHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc-
Confidence 46999999999999998765 20 123333432 33333322 344 22444333333 336789998775433
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecChh------hH-HHHHHHHHcCCceEE
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEPS------AV-TEVENFLKSLHWEIL 843 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~~------~~-~~~~~~~~~l~W~~~ 843 (870)
....+|.++-|+|+|||.+++..... .. ..++.+...+.+.+.
T Consensus 197 ------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred ------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 55678999999999999999996432 33 344555555555554
No 468
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.41 E-value=8.7e-05 Score=80.16 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=35.1
Q ss_pred CCCCEEEEECCCCchhHHHHhcC----CEEEEeCChhhHHHHHHH
Q 002884 466 KYTRVSLDVGCGVASFGGYLFER----DVLTMSFAPKDEHDAQIQ 506 (870)
Q Consensus 466 ~~~~~VLDIGCGtG~~a~~La~r----~VtgVDiSp~ml~~A~vq 506 (870)
.++.+|||+|||+|.++..|+.+ .|+|+|+++.|+..|+.+
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~ 69 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEK 69 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH
Confidence 45789999999999999888753 799999999999887743
No 469
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.40 E-value=1.4e-05 Score=85.28 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=55.4
Q ss_pred cccccccccchhHHhhhcCC-CeEEEEeccCCCC---CChhHHHhhCc-ccee--c-cccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP---DTLPIIYERGL-FGIY--H-DWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~---~tl~~i~eRGl-ig~~--h-~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|+|+..|+++ .|.-+-+.|.... +.+. ....|. +-++ . |. +.++ +.+||+|-|+..+.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~-~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRL-VETFGWNLITFKSKVDV-TKME--PFQADTVLCDIGES 159 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCCTTGGGEEEECSCCG-GGCC--CCCCSEEEECCCCC
T ss_pred CEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhh-hhhcCCCeEEEeccCcH-hhCC--CCCcCEEEECCCcC
Confidence 46999999999999999876 4666666663100 0000 000011 1222 1 22 2222 58999998865422
Q ss_pred cccCC---cChhhHHHhhhhcccCCc--EEEEe
Q 002884 795 QLKNR---CKLVPVMAEVDRIVRPGG--KLIVR 822 (870)
Q Consensus 795 ~~~~r---c~~~~vl~EmDRILRPgG--~~iir 822 (870)
..... -....+|-++.|+||||| .|++.
T Consensus 160 ~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 NPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 11100 000127889999999999 99885
No 470
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.38 E-value=8.8e-05 Score=80.47 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=80.2
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceec-cccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYH-DWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h-~wce~f~tyPrtyDllH 788 (870)
-++|||+|||.|+++.+|... ++ ..|+-+|.. ..+.++.++ |+ +-+++ |+.+.+...+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 367999999999999999887 44 244444443 455554433 22 33333 33332223368999998
Q ss_pred hhccccccc-CC-cChhhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEee------cCCCceEEE
Q 002884 789 ADHLFSQLK-NR-CKLVPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFAF------SKDQEGVLS 855 (870)
Q Consensus 789 a~~lfS~~~-~r-c~~~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~~------~~~~e~iL~ 855 (870)
++. +.... .. ..-..++-++-|+|+|||.+++... .+.+..+...++..--.+.... ....-.+++
T Consensus 195 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~ 273 (321)
T 2pt6_A 195 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 273 (321)
T ss_dssp EEC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred ECC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEE
Confidence 753 22111 10 1115688999999999999999632 2334455555555544444321 112235788
Q ss_pred EEeCC
Q 002884 856 AQKGN 860 (870)
Q Consensus 856 ~~K~~ 860 (870)
|.|.+
T Consensus 274 as~~~ 278 (321)
T 2pt6_A 274 CSKTD 278 (321)
T ss_dssp EESST
T ss_pred eeCCC
Confidence 88875
No 471
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.38 E-value=0.00024 Score=76.28 Aligned_cols=138 Identities=11% Similarity=0.129 Sum_probs=76.4
Q ss_pred cccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh-----------Cccceec-cccccccCCCCccch
Q 002884 721 NVRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER-----------GLFGIYH-DWCESFSTYPRSYDL 786 (870)
Q Consensus 721 ~~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR-----------Glig~~h-~wce~f~tyPrtyDl 786 (870)
.-++|||+|||.|+++..|.+. ++. .|+-+|.. ..+.++.++ .-+-+++ |..+-+...+.+||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~--~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVE--SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCC--EEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCC--EEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 4578999999999999999887 442 33344433 444444332 1233444 333332233589999
Q ss_pred hhhhcccccccC-CcChhhHHHhhhhcccCCcEEEEec-----ChhhHHHHHHHHHcCCceEEEe------ecCCCceEE
Q 002884 787 LHADHLFSQLKN-RCKLVPVMAEVDRIVRPGGKLIVRD-----EPSAVTEVENFLKSLHWEILFA------FSKDQEGVL 854 (870)
Q Consensus 787 lHa~~lfS~~~~-rc~~~~vl~EmDRILRPgG~~iird-----~~~~~~~~~~~~~~l~W~~~~~------~~~~~e~iL 854 (870)
|-++........ ......++-++-|+|+|||.+++.- ..+.+..+...++..--.+... +....-+++
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEE
Confidence 988533211111 1112568889999999999999963 2233344444444333333322 112334688
Q ss_pred EEEeCC
Q 002884 855 SAQKGN 860 (870)
Q Consensus 855 ~~~K~~ 860 (870)
+|.|.+
T Consensus 241 ~as~~~ 246 (294)
T 3adn_A 241 WATDND 246 (294)
T ss_dssp EEESCT
T ss_pred EEeCCc
Confidence 888865
No 472
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.37 E-value=8.3e-05 Score=77.28 Aligned_cols=106 Identities=20% Similarity=0.264 Sum_probs=68.7
Q ss_pred cccccccccchhHHhhhcCC---CeEEEEeccCCCC-CChhHHHhh-----C-c---cceec-cccccccCC-CCccchh
Q 002884 723 RNVMDMRAVYGGFAAALKDL---QVWVMNVVNVNSP-DTLPIIYER-----G-L---FGIYH-DWCESFSTY-PRSYDLL 787 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~---~vwvmNvvp~~~~-~tl~~i~eR-----G-l---ig~~h-~wce~f~ty-PrtyDll 787 (870)
..|||+|||.|.++.+|+.. .. .|+-+|.. ..+..+.++ | + +-+++ |.++. .+ +.+||+|
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~~~~~D~v 175 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELPDGSVDRA 175 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCCTTCEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCCCCceeEE
Confidence 46999999999999999864 33 44555554 555555544 4 2 33333 34332 24 4789998
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh-hhHHHHHHHHHc-CCce
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-SAVTEVENFLKS-LHWE 841 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-~~~~~~~~~~~~-l~W~ 841 (870)
-++ -.....+|.++-|+|||||++++..+. ..+..+...++. ..|.
T Consensus 176 ~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 176 VLD--------MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 762 124557899999999999999997653 444455444444 5554
No 473
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.37 E-value=4.3e-05 Score=83.54 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=63.2
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceec-cccccccCCC-Cccchh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYH-DWCESFSTYP-RSYDLL 787 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h-~wce~f~tyP-rtyDll 787 (870)
-++|||+|||.|+++..|+.. ++ ..|+-++.. ..+.++.++ |+ +-+++ |+.+-+..++ .+||+|
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 478999999999999999987 34 244445543 445444432 33 33444 4444333454 799999
Q ss_pred hhhcccccccCCcC-hhhHHHhhhhcccCCcEEEEe
Q 002884 788 HADHLFSQLKNRCK-LVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 788 Ha~~lfS~~~~rc~-~~~vl~EmDRILRPgG~~iir 822 (870)
-++........... ...++-++-|+|||||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 88542111111111 246889999999999999996
No 474
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.36 E-value=0.0016 Score=66.70 Aligned_cols=92 Identities=11% Similarity=-0.060 Sum_probs=61.2
Q ss_pred CCEEEEECCCCchhHHHHh---cCCEEEEeCChhhHHHHHHHHHHHcCC---CcEEEEcC-cc-c--------------C
Q 002884 468 TRVSLDVGCGVASFGGYLF---ERDVLTMSFAPKDEHDAQIQFALERGI---PAISAVMG-TK-R--------------L 525 (870)
Q Consensus 468 ~~~VLDIGCGtG~~a~~La---~r~VtgVDiSp~ml~~A~vq~A~ergl---~~~~~v~d-ae-~--------------L 525 (870)
.++||++|||. -+..|+ ..+|+++|.++.....|+..++ ..|+ ..+.++.+ +. . +
T Consensus 31 a~~VLEiGtGy--STl~lA~~~~g~VvtvE~d~~~~~~ar~~l~-~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSGG--STVVAAELPGKHVTSVESDRAWARMMKAWLA-ANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCSH--HHHHHHTSTTCEEEEEESCHHHHHHHHHHHH-HSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECchH--HHHHHHHcCCCEEEEEeCCHHHHHHHHHHHH-HcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 67999999964 344443 3489999999998888775444 4454 33434433 21 1 2
Q ss_pred C--------C-CCCceeEEEecccccccccChHHHHHHHHhhcCCCcEEEEE
Q 002884 526 Q--------F-PRNVFDLVHCARCRVPWHIDGGKLLLELNRVLRPGGYFVWS 568 (870)
Q Consensus 526 P--------f-pd~SFDlV~Ss~~alhw~~D~~~vL~Ei~RVLKPGG~Lv~S 568 (870)
+ . ..++||+|+.-. .....++..+.+.|+|||++++-
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg------~k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDG------RFRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECS------SSHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeC------CCchhHHHHHHHhcCCCeEEEEe
Confidence 2 2 237899999852 12246677788999999999774
No 475
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.34 E-value=0.0001 Score=79.92 Aligned_cols=135 Identities=13% Similarity=0.195 Sum_probs=74.8
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceec-cccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYH-DWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h-~wce~f~tyPrtyDllH 788 (870)
-++|||+|||.|+++.+|+.. ++ ..|+-++.. ..+.++.++ |+ +-+++ |..+.+..-+.+||+|-
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESV--EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTC--CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 468999999999999999877 33 344445543 444444433 33 23333 33222222357899998
Q ss_pred hhccccccc-CCcCh-hhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEee----c-CCCc-eEEE
Q 002884 789 ADHLFSQLK-NRCKL-VPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFAF----S-KDQE-GVLS 855 (870)
Q Consensus 789 a~~lfS~~~-~rc~~-~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~~----~-~~~e-~iL~ 855 (870)
++.. .... ..-.. ..++-++-|+|||||.+++... ......+...++.+--.+.... . .... ++++
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ 265 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLI 265 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEE
Confidence 7542 2111 11111 5688999999999999999742 2233444444444433333221 1 1123 6888
Q ss_pred EEeC
Q 002884 856 AQKG 859 (870)
Q Consensus 856 ~~K~ 859 (870)
|.|.
T Consensus 266 ask~ 269 (314)
T 2b2c_A 266 CAKN 269 (314)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8876
No 476
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.34 E-value=2.5e-05 Score=89.42 Aligned_cols=95 Identities=13% Similarity=0.195 Sum_probs=63.2
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCCCChhH----HHhhCc---cceec-cccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSPDTLPI----IYERGL---FGIYH-DWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~~tl~~----i~eRGl---ig~~h-~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|+..+. ..|+-+|....+.. +...|| +-+++ |+.+ + .+|..||+|-++.++.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGA--RKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPMGY 235 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTC--SEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCCHH
T ss_pred CEEEEecCcccHHHHHHHHcCC--CEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCchH
Confidence 5799999999999999987753 13333343323333 334466 44555 3433 2 4578999999977765
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEe
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVR 822 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iir 822 (870)
.... -.+...|.++-|+|+|||++++.
T Consensus 236 ~~~~-e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFN-ERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTC-HHHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCc-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 4432 13455778999999999999853
No 477
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.34 E-value=3.3e-05 Score=84.81 Aligned_cols=95 Identities=13% Similarity=0.238 Sum_probs=62.8
Q ss_pred cccccccccccccchhHHhhhcCC--C--eEEEEeccCCCCCChhHHHhh-CccceeccccccccCCCCccchhhhhccc
Q 002884 719 WSNVRNVMDMRAVYGGFAAALKDL--Q--VWVMNVVNVNSPDTLPIIYER-GLFGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 719 W~~~RnvmDm~ag~GgfaaaL~~~--~--vwvmNvvp~~~~~tl~~i~eR-Glig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
|...+.|||+|||.|.++.+|.+. + +.+.-+ +..+..+.++ ++--+.+|..+ ++|.. |+|.+.+++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~d~~~---~~p~~-D~v~~~~vl 271 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-----PHVIQDAPAFSGVEHLGGDMFD---GVPKG-DAIFIKWIC 271 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCCTTEEEEECCTTT---CCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-----HHHHHhhhhcCCCEEEecCCCC---CCCCC-CEEEEechh
Confidence 566788999999999999999763 3 333333 2222222122 22223335544 56655 999888887
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
-.+... ....+|-++-|+|||||.++|.|
T Consensus 272 h~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 272 HDWSDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp GGBCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hcCCHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 665431 23468999999999999999975
No 478
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.28 E-value=3.7e-05 Score=76.66 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=58.0
Q ss_pred cccccccccchhHHhhhcCCC---eEEEEeccCCCC-CChhHHHhh----Cc--cceec-cccccccCCCCccchhhhhc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQ---VWVMNVVNVNSP-DTLPIIYER----GL--FGIYH-DWCESFSTYPRSYDLLHADH 791 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~---vwvmNvvp~~~~-~tl~~i~eR----Gl--ig~~h-~wce~f~tyPrtyDllHa~~ 791 (870)
..|||+|||.|.+++.|.... . .|+-+|.. ..+..+.++ |+ +-+++ |..+.+. -+.+||+|.+.+
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECC
Confidence 469999999999999987642 2 23334433 455555443 43 22233 3322211 136899999977
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.+.... -++-|+|||||.+++.-..
T Consensus 155 ~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 665322 4889999999999998654
No 479
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.28 E-value=6.3e-05 Score=78.61 Aligned_cols=101 Identities=19% Similarity=0.250 Sum_probs=62.6
Q ss_pred cccccccccccccccccchhHHhhhcCC-----CeEEEEeccCCCCCChhHHHhhCc-cceeccccccccCCC---Cccc
Q 002884 715 LGINWSNVRNVMDMRAVYGGFAAALKDL-----QVWVMNVVNVNSPDTLPIIYERGL-FGIYHDWCESFSTYP---RSYD 785 (870)
Q Consensus 715 Lgi~W~~~RnvmDm~ag~GgfaaaL~~~-----~vwvmNvvp~~~~~tl~~i~eRGl-ig~~h~wce~f~tyP---rtyD 785 (870)
|.+..+.. |||+|||.|.|+.+|++. .|..+.+.|.-...-...+.+++. ..+..+-+.. ..|| .++|
T Consensus 73 l~ikpG~~--VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p-~~~~~~~~~vD 149 (233)
T 4df3_A 73 LPVKEGDR--ILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFP-EKYRHLVEGVD 149 (233)
T ss_dssp CCCCTTCE--EEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCG-GGGTTTCCCEE
T ss_pred cCCCCCCE--EEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCc-cccccccceEE
Confidence 34555544 999999999999999864 266665554322222222334453 3344444433 3333 7888
Q ss_pred hhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 786 LLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 786 llHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
+|.++ |. ..-....+|.|+.|+|||||.++|.+
T Consensus 150 vVf~d--~~---~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 150 GLYAD--VA---QPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEC--CC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEe--cc---CChhHHHHHHHHHHhccCCCEEEEEE
Confidence 77653 11 11234568999999999999999874
No 480
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.26 E-value=4.6e-05 Score=83.66 Aligned_cols=95 Identities=11% Similarity=0.176 Sum_probs=63.1
Q ss_pred cccccccccccccchhHHhhhcCC--C--eEEEEeccCCCCCChhHHHhhC-ccceeccccccccCCCCccchhhhhccc
Q 002884 719 WSNVRNVMDMRAVYGGFAAALKDL--Q--VWVMNVVNVNSPDTLPIIYERG-LFGIYHDWCESFSTYPRSYDLLHADHLF 793 (870)
Q Consensus 719 W~~~RnvmDm~ag~GgfaaaL~~~--~--vwvmNvvp~~~~~tl~~i~eRG-lig~~h~wce~f~tyPrtyDllHa~~lf 793 (870)
|...+.|||+|||.|.++.+|.+. + +.+.-+ +..+..+.++. +--+.+|..+ ++|.. |+|.+.+++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~~~a~~~~~v~~~~~D~~~---~~p~~-D~v~~~~vl 269 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-----PHVISEAPQFPGVTHVGGDMFK---EVPSG-DTILMKWIL 269 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-----HHHHTTCCCCTTEEEEECCTTT---CCCCC-SEEEEESCG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-----HHHHHhhhhcCCeEEEeCCcCC---CCCCC-CEEEehHHh
Confidence 566788999999999999999763 3 333333 22222222222 2223335544 56654 999888877
Q ss_pred ccccCCcChhhHHHhhhhcccCCcEEEEec
Q 002884 794 SQLKNRCKLVPVMAEVDRIVRPGGKLIVRD 823 (870)
Q Consensus 794 S~~~~rc~~~~vl~EmDRILRPgG~~iird 823 (870)
-.+.. -....+|-++-|+|||||+|+|.|
T Consensus 270 h~~~d-~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 270 HDWSD-QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp GGSCH-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCH-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 66542 134578999999999999999975
No 481
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.23 E-value=6.8e-05 Score=81.37 Aligned_cols=96 Identities=13% Similarity=0.211 Sum_probs=64.2
Q ss_pred ccccccccccccccchhHHhhhcCC----CeEEEEeccCCCCCChhHHHh-hCccceeccccccccCCCCccchhhhhcc
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL----QVWVMNVVNVNSPDTLPIIYE-RGLFGIYHDWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~----~vwvmNvvp~~~~~tl~~i~e-RGlig~~h~wce~f~tyPrtyDllHa~~l 792 (870)
.|.....|||+|||.|.++.+|.+. .|.++-+ | ..+..+.+ .++--+.+|..+ ++|. ||+|.+.++
T Consensus 185 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~---~~p~-~D~v~~~~~ 255 (352)
T 1fp2_A 185 VFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFT---SIPN-ADAVLLKYI 255 (352)
T ss_dssp HHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTT---CCCC-CSEEEEESC
T ss_pred ccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccC---CCCC-ccEEEeehh
Confidence 4556688999999999999999854 2444443 2 22221111 122223345544 4564 999999888
Q ss_pred cccccCCcChhhHHHhhhhcccC---CcEEEEec
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRP---GGKLIVRD 823 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRP---gG~~iird 823 (870)
|-.+.+. ....+|-++-|+||| ||+++|.|
T Consensus 256 lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 256 LHNWTDK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp GGGSCHH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred hccCCHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8766431 223799999999999 99999985
No 482
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.22 E-value=0.00034 Score=73.86 Aligned_cols=103 Identities=16% Similarity=0.070 Sum_probs=59.4
Q ss_pred CCCCCEEEEECCCCchhHHHHh----------------cCCEEEEeCCh---hhHHHHH---------HHHHHHc-----
Q 002884 465 GKYTRVSLDVGCGVASFGGYLF----------------ERDVLTMSFAP---KDEHDAQ---------IQFALER----- 511 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La----------------~r~VtgVDiSp---~ml~~A~---------vq~A~er----- 511 (870)
..+..+|||||||+|..+..+. ..++++++..| .++..+. .+.....
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999997554432 12789999877 4444331 1111111
Q ss_pred ----------CCCcE-EEEcCc-ccCCCCC----CceeEEEecccccccccC--hHHHHHHHHhhcCCCcEEEE
Q 002884 512 ----------GIPAI-SAVMGT-KRLQFPR----NVFDLVHCARCRVPWHID--GGKLLLELNRVLRPGGYFVW 567 (870)
Q Consensus 512 ----------gl~~~-~~v~da-e~LPfpd----~SFDlV~Ss~~alhw~~D--~~~vL~Ei~RVLKPGG~Lv~ 567 (870)
+...+ +...|+ +.+|..+ ..||+|+.-...-.-+++ ...+|..+.|+|||||+|+.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 11122 233333 3355322 279999974211110122 26899999999999999985
No 483
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.22 E-value=0.00025 Score=75.02 Aligned_cols=93 Identities=13% Similarity=0.020 Sum_probs=56.3
Q ss_pred CEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHH--HHHc----C-C-CcEEEEcC-cc-cCCCCCCceeEEE
Q 002884 469 RVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQF--ALER----G-I-PAISAVMG-TK-RLQFPRNVFDLVH 536 (870)
Q Consensus 469 ~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~--A~er----g-l-~~~~~v~d-ae-~LPfpd~SFDlV~ 536 (870)
.+|||+|||+|..+..|+.+ .|+++|+++.+...+.... +... + + ..+.++.+ .. -++.....||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 79999999999999888764 8999999998644433222 2111 1 2 23444444 32 2443234699999
Q ss_pred ecccccccccChHHHHHHHHhhcCCCc
Q 002884 537 CARCRVPWHIDGGKLLLELNRVLRPGG 563 (870)
Q Consensus 537 Ss~~alhw~~D~~~vL~Ei~RVLKPGG 563 (870)
+... ++. .....++++..++||+.+
T Consensus 170 lDP~-y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDPM-FPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECCC-CCC-CCC-----HHHHHHHHHS
T ss_pred EcCC-CCC-cccchHHHHHHHHHHHhh
Confidence 9753 333 223456777888888755
No 484
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.22 E-value=0.00029 Score=69.76 Aligned_cols=114 Identities=15% Similarity=0.195 Sum_probs=75.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cc-cceeccccccccCCCCccchhhhhcccccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GL-FGIYHDWCESFSTYPRSYDLLHADHLFSQL 796 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gl-ig~~h~wce~f~tyPrtyDllHa~~lfS~~ 796 (870)
..|||+|||.|+++.+|...+. -+|+-+|.. ..+..+.++ |+ +-+++ ..+..+|.+||+|-++.-|...
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFI---GDVSEFNSRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEE---SCGGGCCCCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEE---CchHHcCCCCCEEEEcCCCccc
Confidence 4699999999999999987753 134455543 455554443 33 22333 3333457799999998777655
Q ss_pred cCCcChhhHHHhhhhcccCCcEEEEe-cChhhHHHHHHHHHcCCceEEE
Q 002884 797 KNRCKLVPVMAEVDRIVRPGGKLIVR-DEPSAVTEVENFLKSLHWEILF 844 (870)
Q Consensus 797 ~~rc~~~~vl~EmDRILRPgG~~iir-d~~~~~~~~~~~~~~l~W~~~~ 844 (870)
... ....+|-++-|+| ||.+++. .+......+..++....|++..
T Consensus 126 ~~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 RKH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp STT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cCC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 432 3345788888998 6655554 2666778888888888887754
No 485
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.19 E-value=7.5e-05 Score=80.48 Aligned_cols=91 Identities=14% Similarity=0.139 Sum_probs=55.0
Q ss_pred cccccccccchhHHhhhcCC-C--eEEEEeccCCCC-CChhHHHhh-----------------Cccceec-cccccccCC
Q 002884 723 RNVMDMRAVYGGFAAALKDL-Q--VWVMNVVNVNSP-DTLPIIYER-----------------GLFGIYH-DWCESFSTY 780 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~-~--vwvmNvvp~~~~-~tl~~i~eR-----------------Glig~~h-~wce~f~ty 780 (870)
..|||+|||.|.++.+|+.. + . .|+-+|.. ..+..+.++ .-+-+++ |.++....+
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQG---RVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCc---eEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 46999999999999998764 2 2 23333433 344444332 1133444 454443345
Q ss_pred C-CccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 781 P-RSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 781 P-rtyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
+ .+||+|.++. .....+|-++-|+|||||.+++...
T Consensus 184 ~~~~fD~V~~~~--------~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDM--------LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECS--------SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECC--------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 5 5899988732 2233478999999999999998764
No 486
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.18 E-value=4.6e-05 Score=81.79 Aligned_cols=93 Identities=17% Similarity=0.069 Sum_probs=58.9
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Ccc--ceec-cccccccCCCCccchhhhhcccc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLF--GIYH-DWCESFSTYPRSYDLLHADHLFS 794 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Gli--g~~h-~wce~f~tyPrtyDllHa~~lfS 794 (870)
..|||+|||.|.++..|....----.|+-++.. ..+..+.++ |+- -+++ |..+ ..+-+..||+|.+++.+.
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~-~~~~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY-GVPEFSPYDVIFVTVGVD 155 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEECSBBS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh-ccccCCCeEEEEEcCCHH
Confidence 469999999999999997652100013333433 555555544 653 3333 3322 222237899999987776
Q ss_pred cccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 795 QLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 795 ~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
... -++-|+|||||.+++....
T Consensus 156 ~~~---------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 156 EVP---------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp CCC---------HHHHHHEEEEEEEEEEBCB
T ss_pred HHH---------HHHHHhcCCCcEEEEEECC
Confidence 432 5778999999999998543
No 487
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.18 E-value=0.00024 Score=77.55 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=89.0
Q ss_pred cccccccccccccccchhHHhhhcCC--CeEEEEeccCCCCCChhHHHhh---C----ccceeccccccccCCCCccchh
Q 002884 717 INWSNVRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSPDTLPIIYER---G----LFGIYHDWCESFSTYPRSYDLL 787 (870)
Q Consensus 717 i~W~~~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~~tl~~i~eR---G----lig~~h~wce~f~tyPrtyDll 787 (870)
+.|+..+.|+|+|||.|.++.+|.+. ++-+ +=.|.|..+..+.++ + +--+-||..+. + +..+|++
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~---~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~--~-~~~~D~~ 248 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGCKI---TVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD--P-LPEADLY 248 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSCEE---EEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS--C-CCCCSEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCcee---EeccCHHHHHHHHHhhhhcccCceeeecCccccC--C-CCCceEE
Confidence 46788899999999999999999865 3321 122334444444332 1 22223454332 2 2468998
Q ss_pred hhhcccccccCCcChhhHHHhhhhcccCCcEEEEecCh--------------h------------hHHHHHHHHHcCCce
Q 002884 788 HADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP--------------S------------AVTEVENFLKSLHWE 841 (870)
Q Consensus 788 Ha~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~--------------~------------~~~~~~~~~~~l~W~ 841 (870)
...+++-.+.+. ....||-++-|.|+|||.++|-|.+ + ...+.+.++..-.|+
T Consensus 249 ~~~~vlh~~~d~-~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 249 ILARVLHDWADG-KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp EEESSGGGSCHH-HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred EeeeecccCCHH-HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 887777665431 2246899999999999999998632 0 135667788888887
Q ss_pred EEEe-ecCCCceEEEEEeCC
Q 002884 842 ILFA-FSKDQEGVLSAQKGN 860 (870)
Q Consensus 842 ~~~~-~~~~~e~iL~~~K~~ 860 (870)
..-. .......+++|+|..
T Consensus 328 ~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 328 DFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp EEEEECCSSSCEEEEEECCC
T ss_pred eEEEEEcCCceEEEEEEecC
Confidence 6433 334456799999964
No 488
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.18 E-value=0.00021 Score=77.06 Aligned_cols=136 Identities=14% Similarity=0.058 Sum_probs=78.7
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------C-c----cceec-cccccccCCCCccchh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------G-L----FGIYH-DWCESFSTYPRSYDLL 787 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------G-l----ig~~h-~wce~f~tyPrtyDll 787 (870)
-++|||+|||.|+++..|++. ++ ..|+-++.. ..+.++.++ | + +-+++ |..+-+...+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 468999999999999999887 33 233444433 344443322 2 1 33333 2222122236899999
Q ss_pred hhhcccccccCCcC-----hhhHHHhhhhcccCCcEEEEec------ChhhHHHHHHHHHcCCceEEEee----c-CCCc
Q 002884 788 HADHLFSQLKNRCK-----LVPVMAEVDRIVRPGGKLIVRD------EPSAVTEVENFLKSLHWEILFAF----S-KDQE 851 (870)
Q Consensus 788 Ha~~lfS~~~~rc~-----~~~vl~EmDRILRPgG~~iird------~~~~~~~~~~~~~~l~W~~~~~~----~-~~~e 851 (870)
-++...... ..+. ...++-++-|+|+|||.+++.- ..+....+...++.+--.+.... . ...-
T Consensus 156 i~d~~~~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~ 234 (314)
T 1uir_A 156 IIDLTDPVG-EDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNF 234 (314)
T ss_dssp EEECCCCBS-TTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEE
T ss_pred EECCCCccc-ccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeE
Confidence 886433220 0011 3568999999999999999872 12345555555665543443221 1 2234
Q ss_pred eEEEEEeCC
Q 002884 852 GVLSAQKGN 860 (870)
Q Consensus 852 ~iL~~~K~~ 860 (870)
.+++|.|.+
T Consensus 235 ~~~~as~~~ 243 (314)
T 1uir_A 235 GFLLASDAF 243 (314)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 578898863
No 489
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.16 E-value=0.00019 Score=77.34 Aligned_cols=136 Identities=17% Similarity=0.193 Sum_probs=75.5
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------Cc----cceecc-ccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------GL----FGIYHD-WCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------Gl----ig~~h~-wce~f~tyPrtyDllH 788 (870)
-++|||+|||.|+++..|++. ++ ..|+-++.. ..+.++.++ |+ +-+++. ..+-+...+.+||+|-
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 478999999999999999887 33 233344433 344444332 33 333432 2221223358999998
Q ss_pred hhcccccccC-CcChhhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEe------ecCCCceEEEE
Q 002884 789 ADHLFSQLKN-RCKLVPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFA------FSKDQEGVLSA 856 (870)
Q Consensus 789 a~~lfS~~~~-rc~~~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~------~~~~~e~iL~~ 856 (870)
++........ .-....++-++-|+|||||.+++... .+....+...++.+-=.+... +....-++++|
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~a 253 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLC 253 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEE
Confidence 7543211100 00123588899999999999998751 223444444444443233222 11223468888
Q ss_pred EeC
Q 002884 857 QKG 859 (870)
Q Consensus 857 ~K~ 859 (870)
.|.
T Consensus 254 s~~ 256 (304)
T 2o07_A 254 SKN 256 (304)
T ss_dssp ESS
T ss_pred eCC
Confidence 886
No 490
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.16 E-value=0.00024 Score=75.37 Aligned_cols=136 Identities=15% Similarity=0.218 Sum_probs=76.2
Q ss_pred ccccccccccchhHHhhhcCC-CeEEEEeccCCCC-CChhHHHhh------C----ccceec-cccccccCCCCccchhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDL-QVWVMNVVNVNSP-DTLPIIYER------G----LFGIYH-DWCESFSTYPRSYDLLH 788 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~-~vwvmNvvp~~~~-~tl~~i~eR------G----lig~~h-~wce~f~tyPrtyDllH 788 (870)
-++|||+|||.|+++..|... ++ ..|+-++.. ..+.++.++ | -+-+++ |..+-....+.+||+|-
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 468999999999999999876 33 234444433 344444332 1 122333 32222222368999998
Q ss_pred hhcccccccCCcCh-hhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEe------ecCCCceEEEE
Q 002884 789 ADHLFSQLKNRCKL-VPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFA------FSKDQEGVLSA 856 (870)
Q Consensus 789 a~~lfS~~~~rc~~-~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~------~~~~~e~iL~~ 856 (870)
++.........-.. ..++-++-|+|||||.+++... .+.+..+...++..--.+... +....-++++|
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~ 236 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCC 236 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEE
Confidence 86432211111111 4688999999999999998842 223344444444443333322 11122357778
Q ss_pred EeC
Q 002884 857 QKG 859 (870)
Q Consensus 857 ~K~ 859 (870)
.|.
T Consensus 237 s~~ 239 (283)
T 2i7c_A 237 SKT 239 (283)
T ss_dssp ESS
T ss_pred eCC
Confidence 776
No 491
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.14 E-value=0.0041 Score=69.21 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=57.3
Q ss_pred CCCCCEEEEECCCCchhHHHHhcC--CEEEEeCChhhHHHHHHHHHHHcCCCcEEEEc-CcccCCCCCCceeEEEecccc
Q 002884 465 GKYTRVSLDVGCGVASFGGYLFER--DVLTMSFAPKDEHDAQIQFALERGIPAISAVM-GTKRLQFPRNVFDLVHCARCR 541 (870)
Q Consensus 465 g~~~~~VLDIGCGtG~~a~~La~r--~VtgVDiSp~ml~~A~vq~A~ergl~~~~~v~-dae~LPfpd~SFDlV~Ss~~a 541 (870)
.+++.+||||||++|.++..|.++ .|++||+.+-.- . . ...+.+.++. +...+..+...||+|+|-..
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~-~-----l--~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~- 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ-S-----L--MDTGQVTWLREDGFKFRPTRSNISWMVCDMV- 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH-H-----H--HTTTCEEEECSCTTTCCCCSSCEEEEEECCS-
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh-h-----h--ccCCCeEEEeCccccccCCCCCcCEEEEcCC-
Confidence 356899999999999999999987 899999886421 1 1 1223444444 44555556678999999642
Q ss_pred cccccChHHHHHHHHhhcCCC
Q 002884 542 VPWHIDGGKLLLELNRVLRPG 562 (870)
Q Consensus 542 lhw~~D~~~vL~Ei~RVLKPG 562 (870)
.++..++.-+.+.|..|
T Consensus 280 ----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 280 ----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp ----SCHHHHHHHHHHHHHTT
T ss_pred ----CChHHhHHHHHHHHhcc
Confidence 24455555555555544
No 492
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.14 E-value=2.6e-05 Score=78.61 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=56.9
Q ss_pred cccccccccchhHHhhhcCCCe----EEEEeccCCCC-CChhHHHhh----Cc-------cceec-ccccccc---CCCC
Q 002884 723 RNVMDMRAVYGGFAAALKDLQV----WVMNVVNVNSP-DTLPIIYER----GL-------FGIYH-DWCESFS---TYPR 782 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~v----wvmNvvp~~~~-~tl~~i~eR----Gl-------ig~~h-~wce~f~---tyPr 782 (870)
..|||+|||.|.+++.|....- =-..|+-+|.. ..+..+.++ |+ +-+++ |..+.+. .-+.
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 4699999999999999876410 00023333433 444444433 42 33333 3333210 1237
Q ss_pred ccchhhhhcccccccCCcChhhHHHhhhhcccCCcEEEEecC
Q 002884 783 SYDLLHADHLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE 824 (870)
Q Consensus 783 tyDllHa~~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~ 824 (870)
.||+|++.+.+. .++-++-|+|||||.+|+.-.
T Consensus 162 ~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 162 LFDAIHVGASAS---------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp CEEEEEECSBBS---------SCCHHHHHHEEEEEEEEEEEE
T ss_pred CcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEEc
Confidence 899999866554 356788999999999998854
No 493
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.12 E-value=0.00017 Score=76.24 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=71.6
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCC-C-CChhHHHhh---------Cc-------ccee-ccccccccCC---
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNS-P-DTLPIIYER---------GL-------FGIY-HDWCESFSTY--- 780 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~-~-~tl~~i~eR---------Gl-------ig~~-h~wce~f~ty--- 780 (870)
+.|||+|||.|.++.+|...+. -.|+-+|. . ..+..+.++ |+ +-+. .+|.......
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 4699999999999999887753 23455555 2 444444332 22 3333 4687654333
Q ss_pred --CCccchhhhhcccccccCCcChhhHHHhhhhccc---C--CcEEEEe--cCh----hhHHHHHHHHHcCC-ceEEEe
Q 002884 781 --PRSYDLLHADHLFSQLKNRCKLVPVMAEVDRIVR---P--GGKLIVR--DEP----SAVTEVENFLKSLH-WEILFA 845 (870)
Q Consensus 781 --PrtyDllHa~~lfS~~~~rc~~~~vl~EmDRILR---P--gG~~iir--d~~----~~~~~~~~~~~~l~-W~~~~~ 845 (870)
+.+||+|-+..++-. .-.+..+|-++.|+|+ | ||.++|. ... .....+...++... |.+...
T Consensus 159 ~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp HSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEEEE
T ss_pred ccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEEEe
Confidence 478999977555432 2246679999999999 9 9965543 211 11234444566666 666543
No 494
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.09 E-value=0.00052 Score=74.66 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=79.8
Q ss_pred ccccccccccccccchhHHhhhcCCC---eEEEEeccCCCC-CChhHHH----hhCc--cceeccccccccCCCCccchh
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDLQ---VWVMNVVNVNSP-DTLPIIY----ERGL--FGIYHDWCESFSTYPRSYDLL 787 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~~---vwvmNvvp~~~~-~tl~~i~----eRGl--ig~~h~wce~f~tyPrtyDll 787 (870)
+|..-..|||+|||.|+++..++... . .|+-+|.. ..+..+. ..|+ |-+++.-...++.....||+|
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~---~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~I 276 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTS---PVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRI 276 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTS---CEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEE
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCc---eEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEE
Confidence 45555679999999999987776531 2 22333333 3444433 3464 444443333444434678999
Q ss_pred hhhccccccc-CCc----ChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEEEe---ecCC-CceEEEEEe
Q 002884 788 HADHLFSQLK-NRC----KLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEILFA---FSKD-QEGVLSAQK 858 (870)
Q Consensus 788 Ha~~lfS~~~-~rc----~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~~~---~~~~-~e~iL~~~K 858 (870)
.++--|..-. ..- ....++.++-|+|||||.++|-.... ..++.+++ ..|+.... ++.. .-.|++++|
T Consensus 277 i~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~--~~~~~~~~-~g~~~~~~~~l~~g~l~~~i~vl~r 353 (354)
T 3tma_A 277 LANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP--ALLKRALP-PGFALRHARVVEQGGVYPRVFVLEK 353 (354)
T ss_dssp EECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH--HHHHHHCC-TTEEEEEEEECCBTTBCCEEEEEEE
T ss_pred EECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH--HHHHHHhh-cCcEEEEEEEEEeCCEEEEEEEEEc
Confidence 9865554211 111 12568889999999999999875543 23556666 78876533 2332 335666665
No 495
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.09 E-value=0.00068 Score=72.96 Aligned_cols=124 Identities=11% Similarity=0.132 Sum_probs=72.7
Q ss_pred cccccccc------cchh-HHhhhcC--CCeEEEEeccCCCCCChhHHHhhCccc-eeccccccccCCCCccchhhhhcc
Q 002884 723 RNVMDMRA------VYGG-FAAALKD--LQVWVMNVVNVNSPDTLPIIYERGLFG-IYHDWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 723 RnvmDm~a------g~Gg-faaaL~~--~~vwvmNvvp~~~~~tl~~i~eRGlig-~~h~wce~f~tyPrtyDllHa~~l 792 (870)
..|||+|| |.|+ .++.+.. ..|.-+-+.|. + .++.= +..|+.+. .++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v-----~~v~~~i~gD~~~~--~~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V-----SDADSTLIGDCATV--HTANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B-----CSSSEEEESCGGGC--CCSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C-----CCCEEEEECccccC--CccCcccEEEEcCC
Confidence 35999999 5576 3333333 23555444444 2 23322 33455442 24589999998643
Q ss_pred cccc------c--CCcChhhHHHhhhhcccCCcEEEEecC-hhhHHHHHHHHHcCCce-EEEe--ecCCCceEEEEEe
Q 002884 793 FSQL------K--NRCKLVPVMAEVDRIVRPGGKLIVRDE-PSAVTEVENFLKSLHWE-ILFA--FSKDQEGVLSAQK 858 (870)
Q Consensus 793 fS~~------~--~rc~~~~vl~EmDRILRPgG~~iird~-~~~~~~~~~~~~~l~W~-~~~~--~~~~~e~iL~~~K 858 (870)
.... . ..-.+..+|-++-|+|||||.|++... ......+..+++...|. +... .....|.+|+|+.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 2211 1 111234789999999999999999542 22235777778877554 4443 1234688888876
No 496
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.09 E-value=5.3e-05 Score=82.40 Aligned_cols=96 Identities=14% Similarity=0.266 Sum_probs=63.1
Q ss_pred ccccccccccccccchhHHhhhcCC--C--eEEEEeccCCCCCChhHHHh-hCccceeccccccccCCCCccchhhhhcc
Q 002884 718 NWSNVRNVMDMRAVYGGFAAALKDL--Q--VWVMNVVNVNSPDTLPIIYE-RGLFGIYHDWCESFSTYPRSYDLLHADHL 792 (870)
Q Consensus 718 ~W~~~RnvmDm~ag~GgfaaaL~~~--~--vwvmNvvp~~~~~tl~~i~e-RGlig~~h~wce~f~tyPrtyDllHa~~l 792 (870)
.|...+.|||+|||.|.++.+|.+. + +.++-+ | ..+..+.+ .++--+.+|..+ ++| .||+|.+.++
T Consensus 190 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~---~~~-~~D~v~~~~v 260 (358)
T 1zg3_A 190 VFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-P----QVVGNLTGNENLNFVGGDMFK---SIP-SADAVLLKWV 260 (358)
T ss_dssp HHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-H----HHHSSCCCCSSEEEEECCTTT---CCC-CCSEEEEESC
T ss_pred hccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-H----HHHhhcccCCCcEEEeCccCC---CCC-CceEEEEccc
Confidence 3456678999999999999999765 2 333333 2 11111111 232223335554 456 4999999888
Q ss_pred cccccCCcChhhHHHhhhhcccC---CcEEEEec
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRP---GGKLIVRD 823 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRP---gG~~iird 823 (870)
|-.+.+. ....+|-++-|+||| ||.++|.|
T Consensus 261 lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 261 LHDWNDE-QSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp GGGSCHH-HHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred ccCCCHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 8766431 123799999999999 99999975
No 497
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.08 E-value=0.00024 Score=70.24 Aligned_cols=111 Identities=12% Similarity=0.050 Sum_probs=68.5
Q ss_pred cccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhhC-ccceeccccccccCCCCccchhhhhcccccccCCc
Q 002884 723 RNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYERG-LFGIYHDWCESFSTYPRSYDLLHADHLFSQLKNRC 800 (870)
Q Consensus 723 RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eRG-lig~~h~wce~f~tyPrtyDllHa~~lfS~~~~rc 800 (870)
..|||+|||.|.|+.+|...+. -.|+-+|.. ..+..+.++- -+-+++. .+..+|.+||+|-++..|......
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~---d~~~~~~~~D~v~~~~p~~~~~~~- 126 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFMVA---DVSEISGKYDTWIMNPPFGSVVKH- 126 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEEEC---CGGGCCCCEEEEEECCCC-------
T ss_pred CEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEEEC---cHHHCCCCeeEEEECCCchhccCc-
Confidence 5699999999999999987753 234555544 5666655552 1223332 222356899999998888766542
Q ss_pred ChhhHHHhhhhcccCCcEEEEecChhhHHHHHHHHHcCCceEE
Q 002884 801 KLVPVMAEVDRIVRPGGKLIVRDEPSAVTEVENFLKSLHWEIL 843 (870)
Q Consensus 801 ~~~~vl~EmDRILRPgG~~iird~~~~~~~~~~~~~~l~W~~~ 843 (870)
....+|-++-|+| |+.+++. +......+..++.... ++.
T Consensus 127 ~~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g-~~~ 165 (200)
T 1ne2_A 127 SDRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG-DVF 165 (200)
T ss_dssp -CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE-EEE
T ss_pred hhHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC-CEE
Confidence 2235788888888 5544444 4456677777777665 443
No 498
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.08 E-value=8e-05 Score=75.89 Aligned_cols=90 Identities=17% Similarity=0.256 Sum_probs=57.1
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHhh----Cccc--eec-cccccccCCC-C-ccchhhhhc
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYER----GLFG--IYH-DWCESFSTYP-R-SYDLLHADH 791 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~eR----Glig--~~h-~wce~f~tyP-r-tyDllHa~~ 791 (870)
-..|||+|||.|.+++.|.+..- ..|+-+|.. ..+..+.++ |+-. ++. |. ...+| . .||+|.+..
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG---SKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG---GGCCGGGCCEEEEEECS
T ss_pred CCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc---ccCCCCCCCccEEEECC
Confidence 35799999999999999987521 233334432 444444443 4422 222 23 34454 3 499999866
Q ss_pred ccccccCCcChhhHHHhhhhcccCCcEEEEecCh
Q 002884 792 LFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP 825 (870)
Q Consensus 792 lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~~ 825 (870)
.+.. +.-++-|+|||||.+|+.-..
T Consensus 167 ~~~~---------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 167 GAPK---------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp BBSS---------CCHHHHHTEEEEEEEEEEECS
T ss_pred cHHH---------HHHHHHHhcCCCcEEEEEEec
Confidence 5542 334788999999999998543
No 499
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.06 E-value=0.00073 Score=71.30 Aligned_cols=125 Identities=11% Similarity=0.096 Sum_probs=70.4
Q ss_pred ccccccccccchhHHhhhcCCCeEEEEeccCCCC-CChhHHHh----------hCccceeccccccccCCCCccchhhhh
Q 002884 722 VRNVMDMRAVYGGFAAALKDLQVWVMNVVNVNSP-DTLPIIYE----------RGLFGIYHDWCESFSTYPRSYDLLHAD 790 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~~vwvmNvvp~~~~-~tl~~i~e----------RGlig~~h~wce~f~tyPrtyDllHa~ 790 (870)
-++|||+|||.|+++++|...+ ..|+-++.. ..+.++.+ ..-+.+++.-+..+ +.+||+|-++
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~---~~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD---IKKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC---CCCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH---HhhCCEEEEC
Confidence 4689999999999999888775 233333332 22222221 11133333222222 3889998875
Q ss_pred cccccccCCcChhhHHHhhhhcccCCcEEEEecC-----hhhHHHHHHHHHcCCceEEEeec----CCCceEEEEEeCC
Q 002884 791 HLFSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDE-----PSAVTEVENFLKSLHWEILFAFS----KDQEGVLSAQKGN 860 (870)
Q Consensus 791 ~lfS~~~~rc~~~~vl~EmDRILRPgG~~iird~-----~~~~~~~~~~~~~l~W~~~~~~~----~~~e~iL~~~K~~ 860 (870)
. .+....+-++-|+|||||.+++... ...+..+...++..--.+..... ...-.+++|.|.+
T Consensus 147 ~--------~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 147 Q--------EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp S--------CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSC
T ss_pred C--------CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCC
Confidence 1 1223378899999999999999621 12233444444443223332211 2234577888863
No 500
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.05 E-value=0.00015 Score=74.21 Aligned_cols=128 Identities=11% Similarity=0.026 Sum_probs=84.1
Q ss_pred ccccccccccchhHHhhhcCC--CeEEEEeccCCCC-CChhHHHhh----Cccc-eeccccccc-cCCCCccchhhhhcc
Q 002884 722 VRNVMDMRAVYGGFAAALKDL--QVWVMNVVNVNSP-DTLPIIYER----GLFG-IYHDWCESF-STYPRSYDLLHADHL 792 (870)
Q Consensus 722 ~RnvmDm~ag~GgfaaaL~~~--~vwvmNvvp~~~~-~tl~~i~eR----Glig-~~h~wce~f-~tyPrtyDllHa~~l 792 (870)
-.+|||+|||+|.+|.+|... .+ .++.+|-. ..+.++.++ |+-+ +-+ +... ...|.+||+|-+..+
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a---~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI---IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC---EEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC---EEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 568999999999999999766 44 55666755 677666654 4442 222 3222 244688999777655
Q ss_pred cccccCCcChhhHHHhhhhcccCCcEEEEecCh-----------hhHHHHHHHHHcCCceEEEeecCCCceEEEEEe
Q 002884 793 FSQLKNRCKLVPVMAEVDRIVRPGGKLIVRDEP-----------SAVTEVENFLKSLHWEILFAFSKDQEGVLSAQK 858 (870)
Q Consensus 793 fS~~~~rc~~~~vl~EmDRILRPgG~~iird~~-----------~~~~~~~~~~~~l~W~~~~~~~~~~e~iL~~~K 858 (870)
+-++. .....+..+-+.|||||.||--++. .+-...+..+..=.|.+....- ..|-+.|.+|
T Consensus 125 LHlL~---~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~-~nEl~y~~~~ 197 (200)
T 3fzg_A 125 LPVLK---QQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVI-GNELVYITSG 197 (200)
T ss_dssp HHHHH---HTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEE-TTEEEEEECC
T ss_pred HHhhh---hhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeee-CceEEEEEec
Confidence 55552 2334677899999999999988722 2346677777888888765322 3344544444
Done!