BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002887
(870 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 174/296 (58%), Gaps = 12/296 (4%)
Query: 551 RKFSYFDVLKITNNF--ERVLGKGGFGTVYHGYLDDKQ-VAVKMLSSSSVQGYK-QFQAE 606
++FS ++ ++NF + +LG+GGFG VY G L D VAVK L QG + QFQ E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 607 VELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLE--DKADTLCWERRLQIA 664
VE++ A H+NL L G+C L+Y +MANG++ + L E + L W +R +IA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
SA+GL YLH+ C P I+HRDVK+ANILL+E+F+A + DFGL+++
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDXHVXXAVR 196
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQ----KTPQRTLIGQWVSSML 780
++ PEY + + +EK+DV+ +GV+LLELITGQ ++ WV +L
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL-NDCLA 835
++ +VD LQG++ V + +++AL C + RP M++VV L D LA
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 189 bits (481), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 173/296 (58%), Gaps = 12/296 (4%)
Query: 551 RKFSYFDVLKITNNF--ERVLGKGGFGTVYHGYLDDKQ-VAVKMLSSSSVQGYK-QFQAE 606
++FS ++ ++NF + +LG+GGFG VY G L D VAVK L QG + QFQ E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 607 VELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLE--DKADTLCWERRLQIA 664
VE++ A H+NL L G+C L+Y +MANG++ + L E + L W +R +IA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
SA+GL YLH+ C P I+HRDVK+ANILL+E+F+A + DFGL+++
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXXAVR 204
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQ----KTPQRTLIGQWVSSML 780
++ PEY + + +EK+DV+ +GV+LLELITGQ ++ WV +L
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL-NDCLA 835
++ +VD LQG++ V + +++AL C + RP M++VV L D LA
Sbjct: 265 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 320
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 167/297 (56%), Gaps = 10/297 (3%)
Query: 548 LENRKFSYFDVLKITNNFER--VLGKGGFGTVYHGYL-DDKQVAVKMLSSSSVQGYKQFQ 604
E+ + D+ + TNNF+ ++G G FG VY G L D +VA+K + S QG ++F+
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 605 AEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADT--LCWERRLQ 662
E+E L H +L L+G+CDE M LIY++M NGNL+ HL T + WE+RL+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
I +A+GL YLH I+HRDVKS NILL+E F K+ DFG+S+
Sbjct: 144 ICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLI--GQWVSSML 780
Y+DPEY+I RLTEKSDVYSFGVVL E++ + I ++ R ++ +W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
G ++ IVD L ++ K + A+ C+ S RP+M V+ +L L ++
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 167/297 (56%), Gaps = 10/297 (3%)
Query: 548 LENRKFSYFDVLKITNNFER--VLGKGGFGTVYHGYL-DDKQVAVKMLSSSSVQGYKQFQ 604
E+ + D+ + TNNF+ ++G G FG VY G L D +VA+K + S QG ++F+
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 605 AEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADT--LCWERRLQ 662
E+E L H +L L+G+CDE M LIY++M NGNL+ HL T + WE+RL+
Sbjct: 84 TEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLE 143
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
I +A+GL YLH I+HRDVKS NILL+E F K+ DFG+S+
Sbjct: 144 ICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLI--GQWVSSML 780
Y+DPEY+I RLTEKSDVYSFGVVL E++ + I ++ R ++ +W
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
G ++ IVD L ++ K + A+ C+ S RP+M V+ +L L ++
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 167/300 (55%), Gaps = 24/300 (8%)
Query: 545 SLELENRKF---SYFDVLKITNNFER--------VLGKGGFGTVYHGYLDDKQVAVKMLS 593
SLE+ + +F S++++ +TNNF+ +G+GGFG VY GY+++ VAVK L+
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 594 S----SSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHL-L 648
+ ++ + +QF E++++ + H+NL L+G+ +G ++ L+Y +M NG+L L
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 649 EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
D L W R +IA +A G+ +LH +HRD+KSANILL+E F AK++DFGL+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 709 RIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI--QKT 766
R Y+ PE + +T KSD+YSFGVVLLE+ITG P + +
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 767 PQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV 826
PQ L+ I++ +D ++ D D+ +V +A C+H +RP + +V
Sbjct: 240 PQ-LLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 168/300 (56%), Gaps = 24/300 (8%)
Query: 545 SLELENRKF---SYFDVLKITNNFER--------VLGKGGFGTVYHGYLDDKQVAVKMLS 593
SLE+ + +F S++++ +TNNF+ +G+GGFG VY GY+++ VAVK L+
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 594 S----SSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHL-L 648
+ ++ + +QF E++++ + H+NL L+G+ +G ++ L+Y +M NG+L L
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 649 EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
D L W R +IA +A G+ +LH +HRD+KSANILL+E F AK++DFGL+
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 709 RIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI--QKT 766
R Y+ PE + +T KSD+YSFGVVLLE+ITG P + +
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 767 PQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV 826
PQ L+ I++ +D ++ D D+ +V +A C+H +RP + +V
Sbjct: 240 PQ-LLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 21/289 (7%)
Query: 553 FSYFDVLKITNNFER--------VLGKGGFGTVYHGYLDDKQVAVKMLSS----SSVQGY 600
FS++++ +TNNF+ +G+GGFG VY GY+++ VAVK L++ ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 601 KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWER 659
+QF E++++ + H+NL L+G+ +G ++ L+Y +M NG+L L D L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
R +IA +A G+ +LH +HRD+KSANILL+E F AK++DFGL+R
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI--QKTPQRTLIGQWVS 777
Y+ PE + +T KSD+YSFGVVLLE+ITG P + + PQ L+
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEE 243
Query: 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV 826
I++ +D ++ D D+ +V +A C+H +RP + +V
Sbjct: 244 IEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 160/289 (55%), Gaps = 21/289 (7%)
Query: 553 FSYFDVLKITNNF-ERVL-------GKGGFGTVYHGYLDDKQVAVKMLSS----SSVQGY 600
FS++++ +TNNF ER + G+GGFG VY GY+++ VAVK L++ ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 601 KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWER 659
+QF E+++ + H+NL L+G+ +G ++ L+Y + NG+L L D L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
R +IA +A G+ +LH +HRD+KSANILL+E F AK++DFGL+R
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI--QKTPQRTLIGQWVS 777
Y PE + +T KSD+YSFGVVLLE+ITG P + + PQ L+
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEE 240
Query: 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV 826
I++ +D + D D+ +V +A C+H +RP + +V
Sbjct: 241 IEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 121/221 (54%), Gaps = 11/221 (4%)
Query: 543 KGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYK- 601
+G+++ ++ + D+ N + +G G FGTV+ VAVK+L +
Sbjct: 24 QGAMDGDDMDIPWCDL-----NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV 78
Query: 602 -QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-DTLCWER 659
+F EV ++ R H N+ + +G + N+ ++ E+++ G+L L + A + L R
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
RL +A + A+G+ YLHN PPIVHRD+KS N+L+++K+ K+ DFGLSR+
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLX 195
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
++ PE EKSDVYSFGV+L EL T Q
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 118/221 (53%), Gaps = 11/221 (4%)
Query: 543 KGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYK- 601
+G+++ ++ + D+ N + +G G FGTV+ VAVK+L +
Sbjct: 24 QGAMDGDDMDIPWCDL-----NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV 78
Query: 602 -QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-DTLCWER 659
+F EV ++ R H N+ + +G + N+ ++ E+++ G+L L + A + L R
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
RL +A + A+G+ YLHN PPIVHR++KS N+L+++K+ K+ DFGLSR+
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLS 195
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
++ PE EKSDVYSFGV+L EL T Q
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 25/212 (11%)
Query: 565 FERVLGKGGFGTVYHGYL--DDKQVAVKML-------SSSSVQGYKQFQAEVELLIRAHH 615
+E+ +GKGGFG V+ G L D VA+K L + ++ +++FQ EV ++ +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L G M + EF+ G+L LL DKA + W +L++ + A G+EY+
Sbjct: 83 PNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 676 NGCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
N PPIVHRD++S NI L N AK+ADFGLS+ ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWM 193
Query: 731 DPEYYISNR--LTEKSDVYSFGVVLLELITGQ 760
PE + TEK+D YSF ++L ++TG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 18 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 77 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 129
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 189
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 190 FQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 75 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 127
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 132
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 80 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 132
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 192
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 193 FQSDVYAFGIVLYELMTGQ 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 127
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 43 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 101
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 102 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 154
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 214
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 215 FQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 155
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ + ++ PE N +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 21/276 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 20 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ + ++ ++ +L HL + ++ + IA ++A+G++YLH I+HRD
Sbjct: 79 K-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLTEK 743
+KS NI L+E K+ DFGL+ + ++ PE SN + +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 744 SDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVW 803
SDVY+FG+VL EL+TGQ R I + M+ RG + + +N
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSLSPDLS-----KVRSNCPK 244
Query: 804 KAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIA 839
+ + C+ RP+ +++ E+ + LA E++
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAEIEE-LARELS 279
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 565 FERVLGKGGFGTVYHGYL--DDKQVAVKML-------SSSSVQGYKQFQAEVELLIRAHH 615
+E+ +GKGGFG V+ G L D VA+K L + ++ +++FQ EV ++ +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L G M + EF+ G+L LL DKA + W +L++ + A G+EY+
Sbjct: 83 PNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 676 NGCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
N PPIVHRD++S NI L N AK+ADFG S+ ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWM 193
Query: 731 DPEYYISNR--LTEKSDVYSFGVVLLELITGQ 760
PE + TEK+D YSF ++L ++TG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 25/212 (11%)
Query: 565 FERVLGKGGFGTVYHGYL--DDKQVAVKML-------SSSSVQGYKQFQAEVELLIRAHH 615
+E+ +GKGGFG V+ G L D VA+K L + ++ +++FQ EV ++ +H
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH 82
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L G M + EF+ G+L LL DKA + W +L++ + A G+EY+
Sbjct: 83 PNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 676 NGCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
N PPIVHRD++S NI L N AK+ADF LS+ ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWM 193
Query: 731 DPEYYISNR--LTEKSDVYSFGVVLLELITGQ 760
PE + TEK+D YSF ++L ++TG+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 75 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 127
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ ++ PE N +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 187
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 188 FQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 36 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 94
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 95 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 147
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ ++ PE N +
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 207
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 208 FQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 15/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 102
Query: 627 EGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + ++ ++ +L HL +E K + + + + IA ++AQG++YLH I+H
Sbjct: 103 K-PQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH---AKSIIH 155
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLT 741
RD+KS NI L+E K+ DFGL+ ++ PE N +
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYS 215
Query: 742 EKSDVYSFGVVLLELITGQ 760
+SDVY+FG+VL EL+TGQ
Sbjct: 216 FQSDVYAFGIVLYELMTGQ 234
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 21/276 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ + ++ ++ +L HL + ++ + IA ++A+G++YLH I+HRD
Sbjct: 91 K-PQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLTEK 743
+KS NI L+E K+ DFGL+ ++ PE SN + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 744 SDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVW 803
SDVY+FG+VL EL+TGQ R I + M+ RG + + +N
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSLSPDLS-----KVRSNCPK 256
Query: 804 KAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIA 839
+ + C+ RP+ +++ E+ + LA E++
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEE-LARELS 291
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 11/197 (5%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLS--SSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVK+L + + ++ F+ EV +L + H N+ + +GY
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ N+ ++ ++ +L HL + ++ + IA ++AQG++YLH I+HRD
Sbjct: 103 KD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQL-IDIARQTAQGMDYLH---AKNIIHRD 157
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLTEK 743
+KS NI L+E K+ DFGL+ + ++ PE +N + +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 744 SDVYSFGVVLLELITGQ 760
SDVYS+G+VL EL+TG+
Sbjct: 218 SDVYSYGIVLYELMTGE 234
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F R LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI EF+ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 133
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 569 LGKGGFGTVY----HGYL---DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL 621
LG+G FG V+ H L D VAVK L +S + FQ E ELL H+++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 622 VGYCDEGANMGLIYEFMANGNLQ---------AHLLEDKADT----LCWERRLQIASESA 668
G C EG + +++E+M +G+L A LL D L + L +AS+ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL VHRD+ + N L+ + K+ DFG+SR
Sbjct: 146 AGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + T +SDV+SFGVVL E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 569 LGKGGFGTVY----HGYL---DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL 621
LG+G FG V+ H L D VAVK L +S + FQ E ELL H+++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 622 VGYCDEGANMGLIYEFMANGNLQ---------AHLLEDKADT----LCWERRLQIASESA 668
G C EG + +++E+M +G+L A LL D L + L +AS+ A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL VHRD+ + N L+ + K+ DFG+SR
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + T +SDV+SFGVVL E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 29/213 (13%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLS-------SSSVQGYKQFQAEVELLIRAHHKN 617
E ++G GGFG VY + +VAVK S +++ +Q E +L H N
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFAMLKHPN 67
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLH 675
+ L G C + N+ L+ EF G L L + D L + A + A+G+ YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL-----VNWAVQIARGMNYLH 122
Query: 676 NGCKPPIVHRDVKSANILLNEKFQ--------AKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+ PI+HRD+KS+NIL+ +K + K+ DFGL+R +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAY 178
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
++ PE ++ ++ SDV+S+GV+L EL+TG+
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 569 LGKGGFGTVY----HGYL---DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL 621
LG+G FG V+ H L D VAVK L +S + FQ E ELL H+++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 622 VGYCDEGANMGLIYEFMANGNLQ---------AHLLEDKADT----LCWERRLQIASESA 668
G C EG + +++E+M +G+L A LL D L + L +AS+ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL VHRD+ + N L+ + K+ DFG+SR
Sbjct: 140 AGMVYLAG---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + T +SDV+SFGVVL E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 21/274 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKML--SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
+G G FGTVY G VAVKML ++ + Q + F+ EV +L + H N+ + +GY
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 89
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ ++ ++ +L HL + ++ + IA ++A+G++YLH I+HRD
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI---SNRLTEK 743
+KS NI L+E K+ DFGL+ ++ PE SN + +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 744 SDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVW 803
SDVY+FG+VL EL+TGQ R I + M+ RG + + +N
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIE----MVGRGSLSPDLS-----KVRSNCPK 256
Query: 804 KAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
+ + C+ RP+ +++ E+ + LA E
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEE-LARE 289
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 565 FERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN 617
+R LG+G FG V+ D VAVK L ++ K FQ E ELL H++
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADT--------------LCWERRLQI 663
+ G C +G + +++E+M +G+L L D L + L I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
AS+ A G+ YL VHRD+ + N L+ K+ DFG+SR
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT--GQPVIQ 764
++ PE + + T +SDV+SFGV+L E+ T QP Q
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 15/224 (6%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSV 597
G++ E+R + F+ + F + LGKG FG+V D Q VAVK L S+
Sbjct: 1 GAMAFEDRDPTQFEERHL--KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 58
Query: 598 QGYKQFQAEVELLIRAHHKNLTILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTL 655
+ + F+ E+E+L H N+ G C N+ LI E++ G+L+ +L + K + +
Sbjct: 59 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERI 117
Query: 656 CWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXX 715
+ LQ S+ +G+EYL G K +HRD+ + NIL+ + + K+ DFGL+++ P
Sbjct: 118 DHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 174
Query: 716 XXXXXXXXXXXXXY-LDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE ++ + SDV+SFGVVL EL T
Sbjct: 175 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + S+ F E E++++ H L L
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMS-EDDFIEEAEVMMKLSHPKLVQLY 88
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L++EFM +G L +L + E L + + +G+ YL C +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 204 KSDVWSFGVLMWEVFS 219
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + ++ + F E E++++ H L L
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLY 71
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L++EFM +G L +L + E L + + +G+ YL C +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 187 KSDVWSFGVLMWEVFS 202
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 565 FERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN 617
+R LG+G FG V+ D VAVK L +S K F E ELL H++
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADT-----------LCWERRLQIASE 666
+ G C EG + +++E+M +G+L L D L + L IA +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
A G+ YL VHRD+ + N L+ E K+ DFG+SR
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + T +SDV+S GVVL E+ T
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + ++ + F E E++++ H L L
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L++EFM +G L +L + E L + + +G+ YL C +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 182 KSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + ++ + F E E++++ H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L++EFM +G L +L + E L + + +G+ YL C +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + A+ + + LQ S+ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 563 NNFE--RVLGKGGFGTVYHG-------YLDDKQVAVKML-SSSSVQGYKQFQAEVELLIR 612
NN E R +G+G FG V+ Y VAVKML +S FQ E L+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLC---------------- 656
+ N+ L+G C G M L++E+MA G+L L T+C
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 657 ------WERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710
+L IA + A G+ YL + VHRD+ + N L+ E K+ADFGLSR
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 711 FPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE NR T +SDV+++GVVL E+ +
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 129
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 130 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 134
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 135 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 130
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 128
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 129 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 161
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 162 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 130
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 135
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 136 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 137
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 138 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 133
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 134 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--CW------ERRLQ------I 663
+ L+G C + + +I E+ + GNL+ +L + L C+ E +L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 268
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 269 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 268
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 269 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--CW------ERRLQ------I 663
+ L+G C + + +I E+ + GNL+ +L + L C+ E +L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 253
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 254 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 148
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 149 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 148
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 149 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + ++ + F E E++++ H L L
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLY 69
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L+ EFM +G L +L + E L + + +G+ YL C +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 185 KSDVWSFGVLMWEVFS 200
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 130
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HRD+ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 131 GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 309
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 310 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 353
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 257
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 258 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 301
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 260
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 261 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 261
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 262 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 305
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 268
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 269 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK +VAVKML S + + +E+E++ + HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LE-------DKADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L LE + + L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A + A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ T + +P + + + +L G
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT----LGGSPYPGVPVEELFKLLKEG 268
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D +N + + C H + ++RPT Q+V +L+ +A+
Sbjct: 269 -------HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 312
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 564 NFERVLGKGGFGTVYHGY-LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + +G G FG V+ GY L+ +VA+K + ++ + F E E++++ H L L
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLY 68
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C E A + L++EFM +G L +L + E L + + +G+ YL + +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLE---EASV 124
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+ E K++DFG++R F + PE + +R +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTR-FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 743 KSDVYSFGVVLLELIT 758
KSDV+SFGV++ E+ +
Sbjct: 184 KSDVWSFGVLMWEVFS 199
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
F + LGKG FG+V D Q VAVK L S+ + + F+ E+E+L H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 619 TILVGYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G C N+ LI E++ G+L+ +L + K + + + LQ S+ +G+EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYL-- 131
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYY 735
G K +HR++ + NIL+ + + K+ DFGL+++ P + PE
Sbjct: 132 GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 736 ISNRLTEKSDVYSFGVVLLELIT 758
++ + SDV+SFGVVL EL T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 152 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 315
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 316 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 367
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 256
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 257 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 308
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 143/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR--IFPXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R + ++ E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 257
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 258 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 309
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY ++ +VAVK L ++ + F E L+ H L L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+MA G+L L D+ + + + +++ A+G+ Y+ + +HRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++AN+L++E K+ADFGL+R+ + PE T KSDV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 196 SFGILLYEIVT 206
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 98 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 261
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 262 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 313
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 39/293 (13%)
Query: 564 NFERVLGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AH 614
N + LG+G FG V + DK VAVKML + ++ +E+++LI H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 615 HKNLTILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK----------ADTLCWERRLQI 663
H N+ L+G C + G + +I EF GNL +L + D L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ + A+G+E+L +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLAR 782
++ PE T +SDV+SFGV+L E+ + + +P + I + L
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFXRRLKE 262
Query: 783 GDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
G R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 263 GT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 254
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 255 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 306
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYK 601
G+++ + + +++ + + LG G +G VY G VAVK L +++ +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 602 QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
+F E ++ H NL L+G C +I EFM GNL +L E + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLL 119
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+A++ + +EYL K +HRD+ + N L+ E K+ADFGLSR+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE N+ + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 6/193 (3%)
Query: 567 RVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+ LG G FG V+ GY ++ +VAVK L ++ + F E L+ H L L
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + +I EFMA G+L L D+ + + + +++ A+G+ Y+ + +HR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+++AN+L++E K+ADFGL+R+ + PE T KS+
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 746 VYSFGVVLLELIT 758
V+SFG++L E++T
Sbjct: 193 VWSFGILLYEIVT 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-------LEDKAD-------TLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L +E D + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 256
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 257 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 308
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G+++L
Sbjct: 94 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 257
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTKAHETA 847
LQ ++ + ++ E+ L C H + RP+ +++V ++ + I H A
Sbjct: 258 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNA 309
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 7/217 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYK 601
G+++ + + +++ + + LG G +G VY G VAVK L +++ +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 602 QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
+F E ++ H NL L+G C +I EFM GNL +L E + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+A++ + +EYL K +HRD+ + N L+ E K+ADFGLSR+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHA 175
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE N+ + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 112 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 275
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 276 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 255
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 256 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAV-----KMLSSSSVQGYKQFQAEVELLIR-AHHKNL 618
F+ V+G+G FG V + + + +M +S ++ F E+E+L + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNL-----QAHLLE---------DKADTLCWERRLQIA 664
L+G C+ + L E+ +GNL ++ +LE A TL ++ L A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
++ A+G++YL + +HRD+ + NIL+ E + AK+ADFGLSR
Sbjct: 139 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 192
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
++ E + T SDV+S+GV+L E+++ + TP + + L +G
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCAELYEKLPQG- 247
Query: 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
+RL+ + + + ++ C RP+ Q+++ LN L
Sbjct: 248 ------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRML 289
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 111 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 274
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 275 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 306
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 564 NFERVLGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AH 614
N + LG+G FG V + DK VAVKML + ++ +E+++LI H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 615 HKNLTILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK-------------ADTLCWERR 660
H N+ L+G C + G + +I EF GNL +L + D L E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 661 LQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX 720
+ + + A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 721 XXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSM 779
++ PE T +SDV+SFGV+L E+ + + +P + I +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRR 263
Query: 780 LARGDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
L G R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 264 LKEGT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 564 NFERVLGKGGFGTVYHG-------YLDDKQVAVKMLSSSSVQG-YKQFQAEVELLIR-AH 614
N + LG+G FG V + VAVKML + ++ +E+++LI H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 615 HKNLTILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK----------ADTLCWERRLQI 663
H N+ L+G C + G + +I EF GNL +L + D L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ + A+G+E+L +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLAR 782
++ PE T +SDV+SFGV+L E+ + + +P + I + L
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKE 262
Query: 783 GDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
G R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 263 GT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 305
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAV-----KMLSSSSVQGYKQFQAEVELLIR-AHHKNL 618
F+ V+G+G FG V + + + +M +S ++ F E+E+L + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 619 TILVGYCDEGANMGLIYEFMANGNL-----QAHLLE---------DKADTLCWERRLQIA 664
L+G C+ + L E+ +GNL ++ +LE A TL ++ L A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
++ A+G++YL + +HRD+ + NIL+ E + AK+ADFGLSR
Sbjct: 149 ADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 202
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
++ E + T SDV+S+GV+L E+++ + TP + + L +G
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCAELYEKLPQG- 257
Query: 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
+RL+ + + + ++ C RP+ Q+++ LN L
Sbjct: 258 ------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRML 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 256
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 257 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 288
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 85 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 248
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 249 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 280
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 92 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 255
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 256 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 90 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 253
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 254 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 285
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYK 601
G+++ + + +++ + + LG G +G VY G VAVK L +++ +
Sbjct: 1 GAMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 59
Query: 602 QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
+F E ++ H NL L+G C +I EFM GNL +L E + L
Sbjct: 60 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 119
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+A++ + +EYL K +HRD+ + N L+ E K+ADFGLSR+
Sbjct: 120 YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHA 175
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE N+ + KSDV++FGV+L E+ T
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 93 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 256
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 257 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 288
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 91 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 254
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 255 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 286
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL + +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 321
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 322 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 365
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 30/275 (10%)
Query: 564 NFERVLGKGGFGTVYHGYL---DDKQV--AVKMLSS-SSVQGYKQFQAEVELLIRAHHKN 617
+F V+G+G FG VYHG L D K++ AVK L+ + + QF E ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 618 LTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+G C EG+ + ++ +M +G+L+ + + ++ + + + A+G++YL
Sbjct: 88 VLSLLGICLRSEGSPL-VVLPYMKHGDLR-NFIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF--PXXXXXXXXXXXXXXXXYLDPE 733
VHRD+ + N +L+EKF K+ADFGL+R ++ E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 734 YYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792
+ + T KSDV+SFGV+L EL+T G P P + ++ L +G
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQG------RRL 251
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
LQ ++ + ++ E+ L C H + RP+ +++V
Sbjct: 252 LQPEYCPDPLY---EVMLKCWHPKAEMRPSFSELV 283
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 41/290 (14%)
Query: 569 LGKGGFGTVYHG-------YLDDKQVAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + VAVKML + ++ +E+++LI HH N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK------------ADTLCWERRLQIASE 666
L+G C + G + +I EF GNL +L + D L E + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
A+G+E+L +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARGDI 785
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGT- 268
Query: 786 KNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 269 ------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 262
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 263 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 306
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 264
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 265 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 308
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E ++ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I E+ + GNL+ +L + + + ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 267
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 268 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 311
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HRD
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 149
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 209 WAFGVLLWEIAT 220
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 30/300 (10%)
Query: 539 AGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSV 597
AG GS E++ + ++ + LG G FG V +G + VA+KM+ S+
Sbjct: 12 AGLGYGSWEIDPKDLTFL----------KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61
Query: 598 QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW 657
+F E ++++ H+ L L G C + + +I E+MANG L +L E +
Sbjct: 62 SE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT- 119
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
++ L++ + + +EYL + +HRD+ + N L+N++ K++DFGLSR +
Sbjct: 120 QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEE 175
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVS 777
+ PE + ++ + KSD+++FGV++ E+ + + K P +
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETA 231
Query: 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
+A+G + L + K I +C H + RPT ++ + D + E
Sbjct: 232 EHIAQG--LRLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 30/300 (10%)
Query: 539 AGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSV 597
AG GS E++ + ++ + LG G FG V +G + VA+KM+ S+
Sbjct: 12 AGLGYGSWEIDPKDLTFL----------KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61
Query: 598 QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW 657
+F E ++++ H+ L L G C + + +I E+MANG L +L E +
Sbjct: 62 SE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT- 119
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
++ L++ + + +EYL + +HRD+ + N L+N++ K++DFGLSR +
Sbjct: 120 QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 175
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVS 777
+ PE + ++ + KSD+++FGV++ E+ + + K P +
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETA 231
Query: 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
+A+G + L + K I +C H + RPT ++ + D + E
Sbjct: 232 EHIAQG--LRLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HR+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAV-----KMLSSSSVQGYKQFQAEVELLIR-AHHKNL 618
F+ V+G+G FG V + + + +M +S ++ F E+E+L + HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 619 TILVGYCDEGANMGLIYEFMANGNL-----QAHLLE---------DKADTLCWERRLQIA 664
L+G C+ + L E+ +GNL ++ +LE A TL ++ L A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
++ A+G++YL + +HR++ + NIL+ E + AK+ADFGLSR
Sbjct: 146 ADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGR 199
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
++ E + T SDV+S+GV+L E+++ + TP + + L +G
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGTPYCGMTCAELYEKLPQG- 254
Query: 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
+RL+ + + + ++ C RP+ Q+++ LN L
Sbjct: 255 ------YRLEKPLNCDD--EVYDLMRQCWREKPYERPSFAQILVSLNRML 296
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 30/300 (10%)
Query: 539 AGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSV 597
AG GS E++ + ++ + LG G FG V +G + VA+KM+ S+
Sbjct: 3 AGLGYGSWEIDPKDLTFL----------KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 52
Query: 598 QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW 657
+F E ++++ H+ L L G C + + +I E+MANG L +L E +
Sbjct: 53 SE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT- 110
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
++ L++ + + +EYL + +HRD+ + N L+N++ K++DFGLSR +
Sbjct: 111 QQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEY 166
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVS 777
+ PE + ++ + KSD+++FGV++ E+ + + K P +
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS----LGKMPYERFTNSETA 222
Query: 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
+A+G + L + K I +C H + RPT ++ + D + E
Sbjct: 223 EHIAQG--LRLYRPHLASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 273
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 72
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 73 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 187
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 267
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 268 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 564 NFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + LG G FG V +G + VA+KM+ S+ +F E ++++ H+ L L
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 69
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C + + +I E+MANG L +L E + ++ L++ + + +EYL +
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQF 125
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+N++ K++DFGLSR + + PE + ++ +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 743 KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTV 802
KSD+++FGV++ E+ + + K P + +A+G + L +
Sbjct: 185 KSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQG--LRLYRPHLASE------ 232
Query: 803 WKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
K I +C H + RPT ++ + D + E
Sbjct: 233 -KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 17 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 75
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 76 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 135 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 190
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 16 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 74
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 75 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 134 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 189
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 20/275 (7%)
Query: 564 NFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + LG G FG V +G + VA+KM+ S+ +F E ++++ H+ L L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 65
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C + + +I E+MANG L +L E + ++ L++ + + +EYL +
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQF 121
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+N++ K++DFGLSR + + PE + ++ +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 743 KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTV 802
KSD+++FGV++ E+ + + K P + +A+G + L +
Sbjct: 181 KSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQG--LRLYRPHLASE------ 228
Query: 803 WKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
K I +C H + RPT ++ + D + E
Sbjct: 229 -KVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 262
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I + + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 564 NFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + LG G FG V +G + VA+KM+ S+ +F E ++++ H+ L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 70
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C + + +I E+MANG L +L E + ++ L++ + + +EYL +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQF 126
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+N++ K++DFGLSR + + PE + ++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 743 KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTV 802
KSD+++FGV++ E+ + + K P + +A+G + L +
Sbjct: 186 KSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQG--LRLYRPHLASE------ 233
Query: 803 WKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
K I +C H + RPT ++ + D +
Sbjct: 234 -KVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 258
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 259 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 18 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 76
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 77 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 136 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 191
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 66
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 67 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 181
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 72
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 73 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 132 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 187
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 10 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 68
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 69 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 128 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 183
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY + +VAVK L S+ F AE L+ + H+ L L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+M NG+L L L + L +A++ A+G+ ++ + +HRD+
Sbjct: 81 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 136
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++ANIL+++ K+ADFGL+R+ + PE T KSDV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 196 SFGILLTEIVT 206
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 258
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 259 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 564 NFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + LG G FG V +G + VA+KM+ S+ +F E ++++ H+ L L
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 70
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
G C + + +I E+MANG L +L E + ++ L++ + + +EYL +
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT-QQLLEMCKDVCEAMEYLES---KQF 126
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ + N L+N++ K++DFGLSR + + PE + ++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 743 KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTV 802
KSD+++FGV++ E+ + + K P + +A+G + L +
Sbjct: 186 KSDIWAFGVLMWEIYS----LGKMPYERFTNSETAEHIAQG--LRLYRPHLASE------ 233
Query: 803 WKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
K I +C H + RPT ++ + D +
Sbjct: 234 -KVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G FG V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 13 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 71
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 72 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 131 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 186
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 267
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 268 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 267
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 268 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 569 LGKGGFGTVYH----GYLDDK-----QVAVKMLSSSSVQ-GYKQFQAEVELL-IRAHHKN 617
LG+G FG V G DK VAVKML + + +E+E++ + HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQI 663
+ L+G C + + +I + + GNL+ +L + + + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ A+G+EYL +HRD+ + N+L+ E K+ADFGL+R
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T +SDV+SFGV++ E+ T + +P + + + +L G
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT----LGGSPYPGIPVEELFKLLKEG 275
Query: 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836
HR+ D N + + C H + ++RPT Q+V +L+ L +
Sbjct: 276 -------HRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 569 LGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGYC 625
+G+G FG V+ G L D+ VAVK + K +F E +L + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + ++ E + G+ L + A L + LQ+ ++A G+EYL + C +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N L+ EK K++DFG+SR + PE R + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 746 VYSFGVVLLELIT 758
V+SFG++L E +
Sbjct: 298 VWSFGILLWETFS 310
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY + +VAVK L S+ F AE L+ + H+ L L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+M NG+L L L + L +A++ A+G+ ++ + +HRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++ANIL+++ K+ADFGL+R+ + PE T KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY + +VAVK L S+ F AE L+ + H+ L L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+M NG+L L L + L +A++ A+G+ ++ + +HRD+
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 135
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++ANIL+++ K+ADFGL+R+ + PE T KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 569 LGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGYC 625
+G+G FG V+ G L D+ VAVK + K +F E +L + H N+ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + ++ E + G+ L + A L + LQ+ ++A G+EYL + C +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N L+ EK K++DFG+SR + PE R + +SD
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 746 VYSFGVVLLELIT 758
V+SFG++L E +
Sbjct: 298 VWSFGILLWETFS 310
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HR+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 304
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 305 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 346
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 61
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 62 HEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 121 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEA 176
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 177 ALYGRFTIKSDVWSFGILLTELTT 200
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G +G VY G VAVK L +++ ++F E ++ H NL L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+I EFM GNL +L E + L +A++ + +EYL K +HR+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 687 VKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDV 746
+ + N L+ E K+ADFGLSR+ + PE N+ + KSDV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 747 YSFGVVLLELIT 758
++FGV+L E+ T
Sbjct: 400 WAFGVLLWEIAT 411
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 269
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 270 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 311
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY + +VAVK L S+ F AE L+ + H+ L L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+M NG+L L L + L +A++ A+G+ ++ + +HRD+
Sbjct: 75 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDL 130
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++ANIL+++ K+ADFGL+R+ + PE T KSDV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 190 SFGILLTEIVT 200
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 258
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 259 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 134/292 (45%), Gaps = 43/292 (14%)
Query: 569 LGKGGFGTVYHG--YLDDKQ-----VAVKMLSSSSVQG-YKQFQAEVELLIR-AHHKNLT 619
LG+G FG V + DK VAVKML + ++ +E+++LI HH N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 620 ILVGYCDE-GANMGLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIA 664
L+G C + G + +I EF GNL +L + D L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARG 783
++ PE T +SDV+SFGV+L E+ + + +P + I + L G
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEG 258
Query: 784 DIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
R++ D+ T +++ + L C H ++RPT +++V L + L
Sbjct: 259 T-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLL 300
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 16/213 (7%)
Query: 560 KITNNFERVLGKGGFGTVYHG-YLDDKQ----VAVKMLSS-SSVQGYKQFQAEVELLIRA 613
++ + +RV+GKG FG VYHG Y+D Q A+K LS + +Q + F E L+
Sbjct: 20 RVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 614 HHKNLTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+H N+ L+G EG L+ +M +G+L + + + + + + A+G+
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV-KDLISFGLQVARGM 137
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR--IFPXXXXXXXXXXXXXXXXY 729
EYL + VHRD+ + N +L+E F K+ADFGL+R + +
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 730 LDPEYYISNRLTEKSDVYSFGVVLLELIT-GQP 761
E + R T KSDV+SFGV+L EL+T G P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 567 RVLGKGGFGTVY------HGYLDDKQVAVKMLSSSSVQGY-KQFQAEVELLIRAHHKNLT 619
R LG+G FG V G +QVAVK L S + + E+E+L +H+N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 620 ILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D G + LI EF+ +G+L+ +L ++K + + +++L+ A + +G++YL +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS- 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + N+L+ + Q K+ DFGL++ I + PE +
Sbjct: 145 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
++ SDV+SFGV L EL+T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 6 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 64
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 65 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 124 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 179
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 180 ALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 60
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 61 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 120 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 175
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 176 ALYGRFTIKSDVWSFGILLTELTT 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 567 RVLGKGGFGTVY------HGYLDDKQVAVKMLSSSSVQGY-KQFQAEVELLIRAHHKNLT 619
R LG+G FG V G +QVAVK L S + + E+E+L +H+N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 620 ILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D G + LI EF+ +G+L+ +L ++K + + +++L+ A + +G++YL +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGS- 132
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + N+L+ + Q K+ DFGL++ I + PE +
Sbjct: 133 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
++ SDV+SFGV L EL+T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 320
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 321 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 380 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 435
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 436 ALYGRFTIKSDVWSFGILLTELTT 459
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 4 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 62
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 63 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 122 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 177
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELTT 201
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 237
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 297 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 352
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 237
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 297 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 352
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ GY + +VAVK L S+ F AE L+ + H+ L L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ +I E+M NG+L L L + L +A++ A+G+ ++ + +HR++
Sbjct: 76 -EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNL 131
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
++ANIL+++ K+ADFGL+R+ + PE T KSDV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 748 SFGVVLLELIT 758
SFG++L E++T
Sbjct: 191 SFGILLTEIVT 201
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 237
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 297 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 352
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 353 ALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+++ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 546 LELENRKFSYFDVLKITNN---FERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY 600
L EN F D ++ + LG G +G VY G VAVK L +++
Sbjct: 14 LGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-V 72
Query: 601 KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERR 660
++F E ++ H NL L+G C ++ E+M GNL +L E + +
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL 132
Query: 661 LQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX 720
L +A++ + +EYL K +HRD+ + N L+ E K+ADFGLSR+
Sbjct: 133 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAH 188
Query: 721 XXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE N + KSDV++FGV+L E+ T
Sbjct: 189 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
++V + T LG G G V+ GY + +VAVK L S+ F AE L+ +
Sbjct: 8 WEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQ 66
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L + + +I E+M NG+L L L + L +A++ A+G+ ++
Sbjct: 67 HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL+++ K+ADFGL+R+ + PE
Sbjct: 126 EERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEA 181
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L E++T
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQ 602
G ++ + +++ + + E LG+G FG V+ G + +VA+K L ++ +
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EA 59
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
F E +++ + H+ L L E + ++ E+M+ G+L L + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+A++ A G+ Y+ + VHRD+ +ANIL+ E K+ADFGL+R+
Sbjct: 119 MAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQG 174
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+ PE + R T KSDV+SFG++L EL T
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 7/191 (3%)
Query: 569 LGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V+ G + + +VA+K L ++ + F E +++ + H L L E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP-ESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ ++ E+M G+L L + + L + +A++ A G+ Y+ + +HRD+
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDL 131
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
+SANIL+ K+ADFGL+R+ + PE + R T KSDV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 748 SFGVVLLELIT 758
SFG++L EL+T
Sbjct: 191 SFGILLTELVT 201
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 180 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP-EAFLQEAQVMKKLR 238
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M+ G+L L + L + + +A++ A G+ Y+
Sbjct: 239 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL R+ + PE
Sbjct: 298 E---RMNYVHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEA 353
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTT 377
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 568 VLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
V +G FG V+ L ++ VAVK+ Q + Q + EV L H+N+ +G
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSW-QNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 628 G----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-------N 676
G ++ LI F G+L L KA+ + W IA A+GL YLH +
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY- 735
G KP I HRD+KS N+LL A +ADFGL+ F Y+ PE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 736 ----ISNRLTEKSDVYSFGVVLLELIT 758
+ D+Y+ G+VL EL +
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 569 LGKGGFGTV----YHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL- 621
LGKG FG+V Y D+ VAVK L S + FQ E+++L +A H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKY 73
Query: 622 --VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
V Y + L+ E++ +G L+ L +A L R L +S+ +G+EYL +
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR-- 130
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYISN 738
VHRD+ + NIL+ + K+ADFGL+++ P + PE N
Sbjct: 131 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 739 RLTEKSDVYSFGVVLLELIT 758
+ +SDV+SFGVVL EL T
Sbjct: 190 IFSRQSDVWSFGVVLYELFT 209
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 12/201 (5%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQ------VAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNL 618
++V+G G FG VY G L VA+K L + + + F E ++ + H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L G + M +I E+M NG L L +K + + + A G++YL N
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALD-KFLREKDGEFSVLQLVGMLRGIAAGMKYLAN-- 165
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYIS 737
VHRD+ + NIL+N K++DFGLSR+ + PE
Sbjct: 166 -MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 738 NRLTEKSDVYSFGVVLLELIT 758
+ T SDV+SFG+V+ E++T
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT 245
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 68
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M G+L L + L + + ++++ A G+ Y+
Sbjct: 69 HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 128 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPEA 183
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY-C 625
+ +GKG FG V G +VAVK + + + + F AE ++ + H NL L+G
Sbjct: 199 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+E + ++ E+MA G+L +L L + L+ + + + +EYL VHR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N+L++E AK++DFGL++ + PE + + KSD
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 746 VYSFGVVLLELIT 758
V+SFG++L E+ +
Sbjct: 369 VWSFGILLWEIYS 381
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 569 LGKGGFGTV----YHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL- 621
LGKG FG+V Y D+ VAVK L S + FQ E+++L +A H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKY 76
Query: 622 --VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
V Y ++ L+ E++ +G L+ L +A L R L +S+ +G+EYL +
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR-- 133
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYISN 738
VHRD+ + NIL+ + K+ADFGL+++ P + PE N
Sbjct: 134 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 739 RLTEKSDVYSFGVVLLELIT 758
+ +SDV+SFGVVL EL T
Sbjct: 193 IFSRQSDVWSFGVVLYELFT 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDDK-QVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E LG+G FG V+ G + +VA+K L ++ + F E +++ +
Sbjct: 10 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLR 68
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H+ L L E + ++ E+M G+L L + L + + ++++ A G+ Y+
Sbjct: 69 HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ VHRD+++ANIL+ E K+ADFGL+R+ + PE
Sbjct: 128 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEA 183
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
+ R T KSDV+SFG++L EL T
Sbjct: 184 ALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 569 LGKGGFGTV----YHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL- 621
LGKG FG+V Y D+ VAVK L S + FQ E+++L +A H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKY 77
Query: 622 --VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
V Y ++ L+ E++ +G L+ L +A L R L +S+ +G+EYL +
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR-- 134
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYISN 738
VHRD+ + NIL+ + K+ADFGL+++ P + PE N
Sbjct: 135 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 739 RLTEKSDVYSFGVVLLELIT 758
+ +SDV+SFGVVL EL T
Sbjct: 194 IFSRQSDVWSFGVVLYELFT 213
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 39/311 (12%)
Query: 543 KGSLELENRKFSYFDVLKITNNF---ERVLGKGGFGTVYHGYLDDK-----QVAVKM--L 592
+GS EL+N+ + + I N ++LG+G FG+V G L + +VAVK L
Sbjct: 17 RGSEELQNK----LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKL 72
Query: 593 SSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL-----IYEFMANGNLQAHL 647
+SS + ++F +E + H N+ L+G C E ++ G+ I FM G+L +L
Sbjct: 73 DNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132
Query: 648 LEDKADT----LCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLA 703
L + +T + + L+ + A G+EYL N +HRD+ + N +L + +A
Sbjct: 133 LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVA 189
Query: 704 DFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
DFGLS+ ++ E T KSDV++FGV + E+ T
Sbjct: 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR---- 245
Query: 764 QKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTM 823
TP + + L G HRL+ D + + EI +C T RPT
Sbjct: 246 GMTPYPGVQNHEMYDYLLHG-------HRLKQPED--CLDELYEIMYSCWRTDPLDRPTF 296
Query: 824 NQVVIELNDCL 834
+ + ++L L
Sbjct: 297 SVLRLQLEKLL 307
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 569 LGKGGFGTV----YHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL- 621
LGKG FG+V Y D+ VAVK L S + FQ E+++L +A H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL-KALHSDFIVKY 89
Query: 622 --VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
V Y ++ L+ E++ +G L+ L +A L R L +S+ +G+EYL +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSR-- 146
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYISN 738
VHRD+ + NIL+ + K+ADFGL+++ P + PE N
Sbjct: 147 -RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 739 RLTEKSDVYSFGVVLLELIT 758
+ +SDV+SFGVVL EL T
Sbjct: 206 IFSRQSDVWSFGVVLYELFT 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E+ LG G FG V+ Y +VAVK + S+ + F AE ++
Sbjct: 10 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ 68
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H L L + + +I EFMA G+L L D+ + + +++ A+G+ ++
Sbjct: 69 HDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+HRD+++ANIL++ K+ADFGL+R+ + PE
Sbjct: 128 EQRN---YIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 183
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L+E++T
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 11/191 (5%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY-C 625
+ +GKG FG V G +VAVK + + + + F AE ++ + H NL L+G
Sbjct: 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+E + ++ E+MA G+L +L L + L+ + + + +EYL VHR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N+L++E AK++DFGL++ + PE + + KSD
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 746 VYSFGVVLLEL 756
V+SFG++L E+
Sbjct: 182 VWSFGILLWEI 192
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 141 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 254 PD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 141 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 254 PD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 5 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 125 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T SDV+SFGVVL E+ T
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 11/193 (5%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY-C 625
+ +GKG FG V G +VAVK + + + + F AE ++ + H NL L+G
Sbjct: 27 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+E + ++ E+MA G+L +L L + L+ + + + +EYL VHR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N+L++E AK++DFGL++ + PE + + KSD
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 746 VYSFGVVLLELIT 758
V+SFG++L E+ +
Sbjct: 197 VWSFGILLWEIYS 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 78
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 79 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 138 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 250
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 251 PD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E+ LG G FG V+ Y +VAVK + S+ + F AE ++
Sbjct: 177 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQ 235
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H L L + + +I EFMA G+L L D+ + + +++ A+G+ ++
Sbjct: 236 HDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI---FPXXXXXXXXXXXXXXXXYLD 731
+HRD+++ANIL++ K+ADFGL+R+ FP +
Sbjct: 295 EQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFP--------------IKWTA 337
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELIT 758
PE T KSDV+SFG++L+E++T
Sbjct: 338 PEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T SDV+SFGVVL E+ T
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 7/204 (3%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+++ + + E+ LG G FG V+ Y +VAVK + S+ + F AE ++
Sbjct: 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQ 241
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H L L + + +I EFMA G+L L D+ + + +++ A+G+ ++
Sbjct: 242 HDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ +HRD+++ANIL++ K+ADFGL+R+ + PE
Sbjct: 301 E---QRNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 356
Query: 735 YISNRLTEKSDVYSFGVVLLELIT 758
T KSDV+SFG++L+E++T
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVT 380
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL N K VHRD+ + N ++ E F K+ DFG++R
Sbjct: 140 MIQMAGEIADGMAYL-NANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 252
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 253 VMEGGLLDKPDN 264
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 141 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 254 PD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 560 KITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEVELLI 611
KIT R LG+G FG VY G + +VA+K ++ ++S++ +F E ++
Sbjct: 19 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 76
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWERRLQI 663
+ ++ L+G +G +I E M G+L+++L + + + +Q+
Sbjct: 77 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A E A G+ YL N K VHRD+ + N ++ E F K+ DFG++R
Sbjct: 137 AGEIADGMAYL-NANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T SDV+SFGVVL E+ T + + P + L + V + G
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFVMEG 249
Query: 784 DIKNIVDH 791
+ + D+
Sbjct: 250 GLLDKPDN 257
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 141 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 254 PD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 11 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 70
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 131 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 243
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 244 VMEGGLLDKPDN 255
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 134 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 246
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 247 VMEGGLLDKPDN 258
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 133 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 245
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 246 VMEGGLLDKPDN 257
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 239
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 240 VMEGGLLDKPDN 251
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + +
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL N K VHRD+ + N ++ E F K+ DFG++R
Sbjct: 140 MIQMAGEIADGMAYL-NANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 252
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 253 VMEGGLLDKPDN 264
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 25/248 (10%)
Query: 560 KITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEVELLI 611
KIT R LG+G FG VY G + +VA+K ++ ++S++ +F E ++
Sbjct: 48 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMK 105
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWERRLQI 663
+ ++ L+G +G +I E M G+L+++L + + + +Q+
Sbjct: 106 EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 165
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
A E A G+ YL N K VHRD+ + N ++ E F K+ DFG++R
Sbjct: 166 AGEIADGMAYL-NANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 222
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
++ PE T SDV+SFGVVL E+ T + + P + L + V + G
Sbjct: 223 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRFVMEG 278
Query: 784 DIKNIVDH 791
+ + D+
Sbjct: 279 GLLDKPDN 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQG 599
G++E + R+++ D R LGKG FG VY +KQ +A+K+L + ++
Sbjct: 1 GAMESKKRQWALEDF-----EIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEK 53
Query: 600 Y---KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLC 656
Q + EVE+ H N+ L GY + + LI E+ G + L K
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFD 111
Query: 657 WERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+R +E A L Y H+ ++HRD+K N+LL + K+ADFG S P
Sbjct: 112 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++S GV+ E + G+P
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 80
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 81 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHRD+ + N ++ F K+ DFG++R
Sbjct: 140 DGMAYL-NAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 252
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 253 PD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 11/191 (5%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY-C 625
+ +GKG FG V G +VAVK + + + + F AE ++ + H NL L+G
Sbjct: 18 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+E + ++ E+MA G+L +L L + L+ + + + +EYL VHR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+ + N+L++E AK++DFGL++ + PE + KSD
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 746 VYSFGVVLLEL 756
V+SFG++L E+
Sbjct: 188 VWSFGILLWEI 198
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 100
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNL------QAHLLEDKADTLCWERR--LQIASE 666
H+N+ L+G C G + +I E+ G+L +A DK D E R L +S+
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQG 599
G++E + R+++ D R LGKG FG VY +KQ +A+K+L + ++
Sbjct: 1 GAMESKKRQWALEDF-----EIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEK 53
Query: 600 Y---KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLC 656
Q + EVE+ H N+ L GY + + LI E+ G + L K
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFD 111
Query: 657 WERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+R +E A L Y H+ ++HRD+K N+LL + K+ADFG S P
Sbjct: 112 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++S GV+ E + G+P
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 10 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + +
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N ++ E F K+ DFG++R
Sbjct: 130 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 242
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 243 VMEGGLLDKPDN 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 22/212 (10%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNL------QAHLLEDKADTLCWERR--LQIASE 666
H+N+ L+G C G + +I E+ G+L +A DK D E R L +S+
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 213
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 148 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 204
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 163 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 219
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 156 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 212
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 173 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 229
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLS-SSSVQGYKQFQAEV 607
++V + R LG+G FG VY G + +VA+K ++ ++S++ +F E
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 608 ELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL--------CWER 659
++ + ++ L+G +G +I E M G+L+++L + + +
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
+Q+A E A G+ YL+ VHRD+ + N + E F K+ DFG++R
Sbjct: 127 MIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ PE T SDV+SFGVVL E+ T + + P + L + V
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----LAEQPYQGLSNEQVLRF 239
Query: 780 LARGDIKNIVDH 791
+ G + + D+
Sbjct: 240 VMEGGLLDKPDN 251
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 197 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 253
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 82
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 83 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHR++ + N ++ F K+ DFG++R
Sbjct: 142 DGMAYL-NAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 254
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 255 PD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 183 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 239
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ D + VA+K+L ++S + K+ E ++ ++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + L+ + M G L H+ E++ L + L + A+G+ YL +
Sbjct: 83 RLLGIC-LTSTVQLVTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYLED--- 137
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+R+ ++ E + R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 740 LTEKSDVYSFGVVLLELIT 758
T +SDV+S+GV + EL+T
Sbjct: 198 FTHQSDVWSYGVTVWELMT 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 567 RVLGKGGFGTVYHGYLDD-------KQVAVKMLS-SSSVQGYKQFQAEVELL--IRAHHK 616
R LG+G FG VY G D +VAVK ++ S+S++ +F E ++ HH
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH- 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHL--LEDKADT------LCWERRLQIASESA 668
+ L+G +G ++ E MA+G+L+++L L +A+ + +Q+A+E A
Sbjct: 82 -VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
G+ YL N K VHR++ + N ++ F K+ DFG++R
Sbjct: 141 DGMAYL-NAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNI 788
++ PE T SD++SFGVVL E+ + + + P + L + V + G +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----LAEQPYQGLSNEQVLKFVMDGGYLDQ 253
Query: 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D N + ++ C RPT ++V L D L
Sbjct: 254 PD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 11/202 (5%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
ERV+G G FG V G L D VA+K L + ++ F E ++ + H N
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ L G G + ++ EFM NG L A L + + + + A G+ YL +
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-VGMLRGIAAGMRYLAD- 163
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + NIL+N K++DFGLSR+ + PE
Sbjct: 164 --MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQ 221
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ T SDV+S+G+V+ E+++
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMS 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 174 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM 230
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQG 599
G++E + R+++ D R LGKG FG VY +KQ +A+K+L + ++
Sbjct: 1 GAMESKKRQWALEDF-----EIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEK 53
Query: 600 Y---KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLC 656
Q + EVE+ H N+ L GY + + LI E+ G + L K
Sbjct: 54 AGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFD 111
Query: 657 WERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+R +E A L Y H+ ++HRD+K N+LL + K+ADFG S P
Sbjct: 112 EQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---- 164
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++S GV+ E + G+P
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 30/277 (10%)
Query: 566 ERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNLT 619
E+V+G G FG V G+L + VA+K L S + ++ F +E ++ + H N+
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L G + + +I EFM NG+L + L ++ + + + A G++YL +
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRGIAAGMKYLADMN- 155
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX---XYLDPEYYI 736
VHRD+ + NIL+N K++DFGLSR + PE
Sbjct: 156 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV--DHRLQ 794
+ T SDV+S+G+V+ E+++ + P + Q D+ N + D+RL
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQ---------DVINAIEQDYRLP 260
Query: 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
D + ++ L C RP Q+V L+
Sbjct: 261 PPMDCPSALH--QLMLDCWQKDRNHRPKFGQIVNTLD 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG++R ++
Sbjct: 171 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM 227
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K+L+ ++ + +F E ++ H +L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + L+ + M +G L ++ E K D + + L + A+G+ YL +
Sbjct: 104 RLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHK-DNIGSQLLLNWCVQIAKGMMYLE---E 158
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+R+ ++ E +
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 218
Query: 740 LTEKSDVYSFGVVLLELIT--GQP 761
T +SDV+S+GV + EL+T G+P
Sbjct: 219 FTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 568 VLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR--AHHKNLTILVGYC 625
+ +G FG V+ L + VAVK+ +Q + +Q+E E+ H+NL +
Sbjct: 22 IKARGRFGCVWKAQLMNDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 626 DEGANM----GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN----- 676
G+N+ LI F G+L +L K + + W +A ++GL YLH
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 677 ---GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
G KP I HRD KS N+LL A LADFGL+ F Y+ PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 734 YY-----ISNRLTEKSDVYSFGVVLLELIT 758
+ D+Y+ G+VL EL++
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 103/204 (50%), Gaps = 14/204 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K+L+ ++ + +F E ++ H +L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + L+ + M +G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHK-DNIGSQLLLNWCVQIAKGMMYLE---E 135
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+R+ ++ E +
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 195
Query: 740 LTEKSDVYSFGVVLLELIT--GQP 761
T +SDV+S+GV + EL+T G+P
Sbjct: 196 FTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
E V+G+G FG V K VA+K + S S + K F E+ L R +H N+ L G C
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS---ESAQGLEYLHNGCKPPI 682
+ L+ E+ G+L L A+ L + S + +QG+ YLH+ +
Sbjct: 72 LN--PVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 683 VHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+HRD+K N+LL K+ DFG + ++ PE + + +
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 742 EKSDVYSFGVVLLELIT 758
EK DV+S+G++L E+IT
Sbjct: 183 EKCDVFSWGIILWEVIT 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
E V+G+G FG V K VA+K + S S + K F E+ L R +H N+ L G C
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS---ESAQGLEYLHNGCKPPI 682
+ L+ E+ G+L L A+ L + S + +QG+ YLH+ +
Sbjct: 71 LN--PVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 683 VHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+HRD+K N+LL K+ DFG + ++ PE + + +
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 742 EKSDVYSFGVVLLELIT 758
EK DV+S+G++L E+IT
Sbjct: 182 EKCDVFSWGIILWEVIT 198
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 40 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 97
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKR- 154
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 208
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQ 764
EK D++S GV+ E + G+P +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDK-------QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNL 618
R LG G FG VY G + QVAVK L S Q F E ++ + +H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEY 673
+G + ++ E MA G+L++ L E + +L L +A + A G +Y
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 674 LHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L +HRD+ + N LL AK+ DFG+++ ++
Sbjct: 157 LEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWM 213
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE ++ T K+D +SFGV+L E+ +
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNL------QAHLLE-DKA-----DTLCWERRLQ 662
H+N+ L+G C G + +I E+ G+L ++ +LE D A TL L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+S+ AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY---KQFQAEVELLIRAHH 615
+FE R LGKG FG VY ++ +A+K+L + ++ Q + EVE+ H
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L GY + + LI E+ G + L K +R +E A L Y H
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 122
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 123 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMI 175
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKP 201
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY---KQFQAEVELLIRAHH 615
+FE R LGKG FG VY + + +A+K+L + ++ Q + EVE+ H
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L GY + + LI E+ G + L K +R +E A L Y H
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCH 125
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 126 S---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPEMI 178
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 14 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 126
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 182
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 22/261 (8%)
Query: 569 LGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE 627
LG G FG V G + VAVKM+ S+ + FQ E + +++ H L G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVCSK 74
Query: 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687
+ ++ E+++NG L + L L + L++ + +G+ +L + +HRD+
Sbjct: 75 EYPIYIVTEYISNGCL-LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDL 130
Query: 688 KSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVY 747
+ N L++ K++DFG++R + + PE + + + KSDV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 748 SFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFDTNTVWKAV 806
+FG+++ E+ + + K P V +++G HRL + ++T++
Sbjct: 190 AFGILMWEVFS----LGKMPYDLYTNSEVVLKVSQG-------HRLYRPHLASDTIY--- 235
Query: 807 EIALACIHTISTRRPTMNQVV 827
+I +C H + +RPT Q++
Sbjct: 236 QIMYSCWHELPEKRPTFQQLL 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 19 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 131
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEXIEGRX 187
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKP 209
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 7 EDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 122
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPE 175
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 203
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 31 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 88
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSK-- 144
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 145 -RVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 199
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKP 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 17 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 129
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 185
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKP 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 14 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 126
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTELCGTLDYLPPEMIEGRM 182
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 15 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLSGTLDYLPPEMIEGRM 183
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKP 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 131
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 15 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDTLCGTLDYLPPEMIEGRM 183
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKP 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 15 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIEGRM 183
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKP 205
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 30 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 148
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 149 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 40 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 97
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKR- 154
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 155 --VIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYLPPEMIEGRM 208
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQ 764
EK D++S GV+ E + G+P +
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 123
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPE 176
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 126
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPE 179
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 16 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 73
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 128
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPEMIEGRM 184
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKP 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 12 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 127
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 128 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPE 180
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 13 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPE 181
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 17 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 129
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPEMIEGRM 185
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 123
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRAALCGTLDYLPPE 176
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 14 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 126
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIEGRM 182
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 123
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTXLCGTLDYLPPE 176
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 557 DVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQFQAEVELLIRA 613
D ++ ER+ GKG FG V+ G + Q VA+K++ + + Q E+ +L +
Sbjct: 20 DPEELFTKLERI-GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS---ESAQG 670
+T G +G+ + +I E++ G+ L D QIA+ E +G
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFD------EFQIATMLKEILKG 132
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L+YLH+ K +HRD+K+AN+LL+E+ KLADFG++ ++
Sbjct: 133 LDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNTFVGTPFWM 187
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790
PE + K+D++S G+ +EL G+P P + V ++ + + +V
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEP-----PNSDMHPMRVLFLIPKNNPPTLV- 241
Query: 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV 827
GDF + E AC++ + RPT +++
Sbjct: 242 ----GDFTKSF----KEFIDACLNKDPSFRPTAKELL 270
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 97/224 (43%), Gaps = 27/224 (12%)
Query: 547 ELENRKFSY--FDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY 600
E+ RKF+ FD++ R LGKG FG VY +KQ +A+K+L S ++
Sbjct: 5 EMPKRKFTIDDFDIV-------RPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKE 55
Query: 601 ---KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW 657
Q + E+E+ H N+ + Y + + L+ EF G L L K
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDE 113
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+R E A L Y H ++HRD+K N+L+ K + K+ADFG S P
Sbjct: 114 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----S 166
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++ GV+ E + G P
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY---KQFQAEVELLIRAHH 615
++FE R LGKG FG VY VA+K+L S ++ Q + E+E+ HH
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L Y + + LI E+ G L L K+ T +R I E A L Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYCH 140
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
G K ++HRD+K N+LL K + K+ADFG S P YL PE
Sbjct: 141 -GKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKTMCGTLDYLPPEMI 193
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++ GV+ EL+ G P
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVGNP 219
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 126
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPE 179
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 8 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 123
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRXXLCGTLDYLPPE 176
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 204
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 40 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 158
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 159 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRA 613
+FE R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+
Sbjct: 11 EDFEIGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
H N+ L GY + + LI E+ G + L K +R +E A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSY 126
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRDDLCGTLDYLPPE 179
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKP 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 565 FERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNL 618
ERV+G G FG V G L + VA+K L + ++ F E ++ + H N+
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L G + + ++ E+M NG+L L ++ + + SA G++YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISA-GMKYLSDMG 144
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYIS 737
VHRD+ + NIL+N K++DFGLSR+ + PE
Sbjct: 145 ---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 738 NRLTEKSDVYSFGVVLLELIT 758
+ T SDV+S+G+V+ E+++
Sbjct: 202 RKFTSASDVWSYGIVMWEVVS 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 547 ELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY-- 600
E+ RKF+ D + R LGKG FG VY +KQ +A+K+L S ++
Sbjct: 6 EMPKRKFTIDDF-----DIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 601 -KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWER 659
Q + E+E+ H N+ + Y + + L+ EF G L L K +R
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQR 116
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
E A L Y H ++HRD+K N+L+ K + K+ADFG S P
Sbjct: 117 SATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLR 169
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++ GV+ E + G P
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 547 ELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY-- 600
E+ RKF+ D + R LGKG FG VY +KQ +A+K+L S ++
Sbjct: 5 EMPKRKFTIDDF-----DIGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 601 -KQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWER 659
Q + E+E+ H N+ + Y + + L+ EF G L L K +R
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQR 115
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXX 719
E A L Y H ++HRD+K N+L+ K + K+ADFG S P
Sbjct: 116 SATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLR 168
Query: 720 XXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE EK D++ GV+ E + G P
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNL------QAHLLE-DKA-----DTLCWERRLQ 662
H+N+ L+G C G + +I E+ G+L ++ +LE D A T L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+S+ AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 567 RVLGKGGFG-----TVYH--GYLDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNL 618
+ LG+G FG T +H G VAVKML ++S + +E +L + +H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW----------------ERRLQ 662
L G C + + LI E+ G+L+ L E + + ER L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 663 I------ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+ A + +QG++YL + +VHRD+ + NIL+ E + K++DFGLSR
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT--GQPVIQKTPQR 769
++ E + T +SDV+SFGV+L E++T G P P+R
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGL+R+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 13 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E M NG+L + L + A + + + A G+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 131
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 30/278 (10%)
Query: 565 FERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNL 618
E+V+G G FG V G+L + VA+K L S + ++ F +E ++ + H N+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L G + + +I EFM NG+L + L ++ + + + A G++YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRGIAAGMKYLAD-- 127
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX---XYLDPEYY 735
VHR + + NIL+N K++DFGLSR + PE
Sbjct: 128 -MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV--DHRL 793
+ T SDV+S+G+V+ E+++ + P + Q D+ N + D+RL
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS----YGERPYWDMTNQ---------DVINAIEQDYRL 233
Query: 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
D + ++ L C RP Q+V L+
Sbjct: 234 PPPMDCPSALH--QLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 567 RVLGKGGFG-----TVYH--GYLDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNL 618
+ LG+G FG T +H G VAVKML ++S + +E +L + +H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW----------------ERRLQ 662
L G C + + LI E+ G+L+ L E + + ER L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 663 I------ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+ A + +QG++YL + +VHRD+ + NIL+ E + K++DFGLSR
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT--GQPVIQKTPQR 769
++ E + T +SDV+SFGV+L E++T G P P+R
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 35/225 (15%)
Query: 565 FERVLGKGGFGTVYHG--YLDDK-----QVAVKMLSSSSVQGYKQ-FQAEVELLIR-AHH 615
F +VLG G FG V + Y K QVAVKML + ++ +E++++ + H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHL-------------------LEDKAD--T 654
+N+ L+G C + LI+E+ G+L +L LE++ D
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 655 LCWERRLQIASESAQGLEYLH-NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPX 713
L +E L A + A+G+E+L C VHRD+ + N+L+ K+ DFGL+R
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 714 XXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T KSDV+S+G++L E+ +
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLTIL 621
R LGKG FG VY + +A+K+L + ++ Q + EVE+ H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 742 EKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G P
Sbjct: 189 EKVDLWSLGVLCYEFLVGMP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 16 RPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 73
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 128
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+A+FG S P YL PE
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 184
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKP 206
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 32/281 (11%)
Query: 566 ERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLT 619
E V+G G FG V G L + VA+K L + + ++F +E ++ + H N+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L G + ++ EFM NG L + L L D T+ + + + A G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYL---A 133
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX---XYLDPEYY 735
+ VHRD+ + NIL+N K++DFGLSR + PE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV--DHRL 793
+ T SD +S+G+V+ E+++ G+ ++ D+ N + D+RL
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS-------------FGERPYWDMSNQDVINAIEQDYRL 240
Query: 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
D T ++ L C RP QVV L+ +
Sbjct: 241 PPPPDCPTSLH--QLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLT 619
R LGKG FG VY +KQ +A+K+L + ++ Q + EVE+ H N+
Sbjct: 17 RPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 74
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS--- 129
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL + K+A+FG S P YL PE
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRM 185
Query: 740 LTEKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G+P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKP 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 567 RVLGKGGFG-----TVYH--GYLDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNL 618
+ LG+G FG T +H G VAVKML ++S + +E +L + +H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW----------------ERRLQ 662
L G C + + LI E+ G+L+ L E + + ER L
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 663 I------ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX 716
+ A + +QG++YL + +VHRD+ + NIL+ E + K++DFGLSR
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT--GQPVIQKTPQR 769
++ E + T +SDV+SFGV+L E++T G P P+R
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 32/282 (11%)
Query: 565 FERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNL 618
E V+G G FG V G L + VA+K L + + ++F +E ++ + H N+
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNG 677
L G + ++ EFM NG L + L L D T+ + + + A G+ YL
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYL--- 134
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX---XYLDPEY 734
+ VHRD+ + NIL+N K++DFGLSR + PE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV--DHR 792
+ T SD +S+G+V+ E+++ G+ ++ D+ N + D+R
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS-------------FGERPYWDMSNQDVINAIEQDYR 241
Query: 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
L D T ++ L C RP QVV L+ +
Sbjct: 242 LPPPPDCPTSLH--QLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 114/224 (50%), Gaps = 21/224 (9%)
Query: 544 GSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHG-YLDDKQ-----VAVKMLSSSSV 597
G++++ R F ++ K+ +VLG G FGTV+ G ++ + + V +K++ S
Sbjct: 1 GAMKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS- 54
Query: 598 QGYKQFQAEVELLI---RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADT 654
G + FQA + ++ H ++ L+G C G+++ L+ +++ G+L H+ + +
Sbjct: 55 -GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRG-A 111
Query: 655 LCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX 714
L + L + A+G+ YL +VHR++ + N+LL Q ++ADFG++ + P
Sbjct: 112 LGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
Query: 715 XXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ E + T +SDV+S+GV + EL+T
Sbjct: 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E+M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGL R+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGY---KQFQAEVELLIRAHHKNLTIL 621
R LGKG FG VY + +A+K+L + ++ Q + EVE+ H N+ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
GY + + LI E+ G + L K +R +E A L Y H+
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
++HRD+K N+LL + K+ADFG S P YL PE
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAP----SSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 742 EKSDVYSFGVVLLELITGQP 761
EK D++S GV+ E + G P
Sbjct: 189 EKVDLWSLGVLCYEFLVGMP 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 35/225 (15%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 93
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLE-------------------DKADTL 655
H+N+ L+G C G + +I E+ G+L L DK D
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 656 CWERR--LQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPX 713
E R L +S+ AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 154 PLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 714 XXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 82 RLLGIC-LTSTVQLIMQLMPFGXLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 137
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 138 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 197 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 245
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 246 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 275
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLI 611
L TN + ++V+G G FG V G L + VA+K L + ++ F E ++
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
+ H N+ L G + + ++ E M NG+L + L + A + + + A G+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-VGMLRGIASGM 160
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYL 730
+YL + VHRD+ + NIL+N K++DFGLSR+ +
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELIT 758
PE + T SDV+S+G+VL E+++
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 85 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 140
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 141 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 200 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 248
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 249 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 278
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGIC-LTSTVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 244
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 245 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 546 LELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQ 602
L EN F D ++ E++ GKG FG V+ G + Q VA+K++ + +
Sbjct: 13 LGTENLYFQSMDPEELFTKLEKI-GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED 71
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ 662
Q E+ +L + +T G + + +I E++ G+ LLE L +
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLE--PGPLDETQIAT 128
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
I E +GL+YLH+ K +HRD+K+AN+LL+E + KLADFG++
Sbjct: 129 ILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNT 183
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
++ PE + K+D++S G+ +EL G+P
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 82 RLLGIC-LTSTVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 137
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 138 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 197 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 245
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 246 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 275
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 565 FERVLGKGGFGTVYHGYL-----DDK--QVAVKMLSSSSVQGYKQFQAEVELLIRAH--- 614
F + LG G FG V +D +VAVKML S++ K+ EL I +H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS-ELKIMSHLGQ 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERR-------------- 660
H+N+ L+G C G + +I E+ G+L L + L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 661 LQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX 720
L +S+ AQG+ +L +HRDV + N+LL AK+ DFGL+R
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 721 XXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE T +SDV+S+G++L E+ +
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY + V A K++ + S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA-SESAQGLEYLHNGCKPPIVHR 685
N+ ++ EF A G + A +LE + E ++Q+ ++ L YLH+ I+HR
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE--- 742
D+K+ NIL KLADFG+S ++ PE + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 743 --KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
K+DV+S G+ L+E+ +P + P R L+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGICLT-STVQLITQLMPFGXLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 244
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 245 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 138
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 139 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 198 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 246
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 247 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 276
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 84 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 139
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 140 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 199 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 247
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 248 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 277
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 568 VLGKGGFG---TVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY 624
VLGKG FG V H + V +K L + + F EV+++ H N+ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
+ + I E++ G L+ +++ W +R+ A + A G+ YLH+ I+H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIH 131
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXX------------XXXXXXXXXXXYLDP 732
RD+ S N L+ E +ADFGL+R+ ++ P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 733 EYYISNRLTEKSDVYSFGVVLLELI 757
E EK DV+SFG+VL E+I
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 75 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 130
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 131 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 190 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 238
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 239 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 268
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 244
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 245 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 274
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 16/201 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKMLSSSSVQGYKQFQAEVELLI---RAHHKN 617
+VLG G FGTV+ G ++ + + V +K++ S G + FQA + ++ H +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAH 94
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ L+G C G+++ L+ +++ G+L H+ + + L + L + A+G+ YL
Sbjct: 95 IVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
+VHR++ + N+LL Q ++ADFG++ + P ++ E
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 738 NRLTEKSDVYSFGVVLLELIT 758
+ T +SDV+S+GV + EL+T
Sbjct: 210 GKYTHQSDVWSYGVTVWELMT 230
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY + V A K++ + S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA-SESAQGLEYLHNGCKPPIVHR 685
N+ ++ EF A G + A +LE + E ++Q+ ++ L YLH+ I+HR
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE--- 742
D+K+ NIL KLADFG+S ++ PE + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 743 --KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
K+DV+S G+ L+E+ +P + P R L+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 106 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 161
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 162 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 221 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 269
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 270 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 299
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 87 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 142
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 143 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 202 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 250
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 251 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 280
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 84 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 139
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 140 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 199 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 247
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 248 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 277
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 84 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 139
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 140 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 199 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 247
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 248 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 277
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 78 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAEGMNYLEDR-- 133
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 134 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 193 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 241
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 242 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY + V A K++ + S + + + E+++L H N+ L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA-SESAQGLEYLHNGCKPPIVHR 685
N+ ++ EF A G + A +LE + E ++Q+ ++ L YLH+ I+HR
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN---KIIHR 159
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE--- 742
D+K+ NIL KLADFG+S ++ PE + +
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 743 --KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
K+DV+S G+ L+E+ +P + P R L+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
E+V+G G FG V G L + VA+K L + ++ F +E ++ + H N
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 91
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ L G + + +I E+M NG+L A L ++ + + + G++YL +
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLSDM 150
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + NIL+N K++DFG+SR+ + PE
Sbjct: 151 SA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ T SDV+S+G+V+ E+++
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMS 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 83 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 138
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 139 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 198 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 246
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 247 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 276
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 88 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 144 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 203 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 251
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 252 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 281
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
E+V+G G FG V G L + VA+K L + ++ F +E ++ + H N
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ L G + + +I E+M NG+L A L ++ + + + G++YL +
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLSD- 128
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + NIL+N K++DFG+SR+ + PE
Sbjct: 129 --MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ T SDV+S+G+V+ E+++
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
E+V+G G FG V G L + VA+K L + ++ F +E ++ + H N
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ L G + + +I E+M NG+L A L ++ + + + G++YL +
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRGIGSGMKYLSD- 134
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYYI 736
VHRD+ + NIL+N K++DFG+SR+ + PE
Sbjct: 135 --MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ T SDV+S+G+V+ E+++
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMS 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 91 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 146
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 147 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
T +SDV+S+GV + EL+T P + +SS+L +G+
Sbjct: 206 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE 246
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 84 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 139
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 140 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
T +SDV+S+GV + EL+T P + +SS+L +G+
Sbjct: 199 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE 239
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 26/228 (11%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLI 611
S D K FE++ G+G GTVY ++VA++ ++ Q K+ E+L+
Sbjct: 14 SVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILV 70
Query: 612 RAHHKNLTILVGYCDE---GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS--- 665
+KN I V Y D G + ++ E++A G+L D C + QIA+
Sbjct: 71 MRENKNPNI-VNYLDSYLVGDELWVVMEYLAGGSLT-----DVVTETCMDEG-QIAAVCR 123
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL-SRIFPXXXXXXXXXXXX 724
E Q LE+LH+ ++HRD+KS NILL KL DFG ++I P
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSTMV 177
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTL 771
++ PE K D++S G++ +E+I G+ P + + P R L
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 16/225 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
T +SDV+S+GV + EL+T P + +SS+L +G+
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE 236
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 26/228 (11%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLI 611
S D K FE++ G+G GTVY ++VA++ ++ Q K+ E+L+
Sbjct: 14 SVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILV 70
Query: 612 RAHHKNLTILVGYCDE---GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS--- 665
+KN I V Y D G + ++ E++A G+L D C + QIA+
Sbjct: 71 MRENKNPNI-VNYLDSYLVGDELWVVMEYLAGGSLT-----DVVTETCMDEG-QIAAVCR 123
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL-SRIFPXXXXXXXXXXXX 724
E Q LE+LH+ ++HRD+KS NILL KL DFG ++I P
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSEMV 177
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTL 771
++ PE K D++S G++ +E+I G+ P + + P R L
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVK-------MLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G + VK + ++S + K+ E ++ + ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 115 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 170
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 171 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 230 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 278
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 279 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 308
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 22/221 (9%)
Query: 557 DVLKITNNFE--RVLGKGGFGTVYHGYLDDK-----QVAVKMLSSSSVQG--YKQFQAEV 607
DVL F R+LGKG FG+V L + +VAVKML + + ++F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 608 ELLIRAHHKNLTILVGYCDEGANMG------LIYEFMANGNLQAHLLEDKAD----TLCW 657
+ H ++ LVG G +I FM +G+L A LL + L
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+ ++ + A G+EYL + +HRD+ + N +L E +ADFGLSR
Sbjct: 137 QTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
+L E N T SDV++FGV + E++T
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLI 611
S D K FE++ G+G GTVY ++VA++ ++ Q K+ E+L+
Sbjct: 14 SVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILV 70
Query: 612 RAHHKNLTILVGYCDE---GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS--- 665
+KN I V Y D G + ++ E++A G+L D C + QIA+
Sbjct: 71 MRENKNPNI-VNYLDSYLVGDELWVVMEYLAGGSLT-----DVVTETCMDEG-QIAAVCR 123
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL-SRIFPXXXXXXXXXXXX 724
E Q LE+LH+ ++HRD+KS NILL KL DFG ++I P
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMV 177
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTL 771
++ PE K D++S G++ +E+I G+ P + + P R L
Sbjct: 178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 26/228 (11%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLI 611
S D K FE++ G+G GTVY ++VA++ ++ Q K+ E+L+
Sbjct: 15 SVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILV 71
Query: 612 RAHHKNLTILVGYCDE---GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS--- 665
+KN I V Y D G + ++ E++A G+L D C + QIA+
Sbjct: 72 MRENKNPNI-VNYLDSYLVGDELWVVMEYLAGGSLT-----DVVTETCMDEG-QIAAVCR 124
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL-SRIFPXXXXXXXXXXXX 724
E Q LE+LH+ ++HRD+KS NILL KL DFG ++I P
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMV 178
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTL 771
++ PE K D++S G++ +E+I G+ P + + P R L
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 568 VLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTILV 622
+LG GG V+ D + VAVK+L + + Y +F+ E + +H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 623 GYCDEGANMG----LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-NG 677
+ G ++ E++ L+ + + +R +++ +++ Q L + H NG
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I+HRDVK ANIL++ K+ DFG++R I YL PE
Sbjct: 137 ----IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 737 SNRLTEKSDVYSFGVVLLELITGQP 761
+ + +SDVYS G VL E++TG+P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 565 FERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHK 616
F LG+ FG VY G+L + VA+K L + ++ F+ E L R H
Sbjct: 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 89
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLL------------EDKADTLCWE--RRLQ 662
N+ L+G + + +I+ + ++G+L L+ +D+ E +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+ ++ A G+EYL + +VH+D+ + N+L+ +K K++D GL R
Sbjct: 150 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 723 XXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + + SD++S+GVVL E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 85 RLLGIC-LTSTVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 140
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 141 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 200 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 248
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 249 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 278
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 564 NFERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHH 615
F LG+ FG VY G+L + VA+K L + ++ F+ E L R H
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLL------------EDKADTLCWE--RRL 661
N+ L+G + + +I+ + ++G+L L+ +D+ E +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+ ++ A G+EYL + +VH+D+ + N+L+ +K K++D GL R
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT 758
++ PE + + + SD++S+GVVL E+ +
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 138
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 139 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 198 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 246
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 247 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 276
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 564 NFERVLGK-GGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+F ++G+ G FG VY + V A K++ + S + + + E+++L H N+
Sbjct: 12 DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA-SESAQGLEYLHNGCK 679
L+ N+ ++ EF A G + A +LE + E ++Q+ ++ L YLH+
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDN-- 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
I+HRD+K+ NIL KLADFG+S ++ PE +
Sbjct: 128 -KIIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 740 LTE-----KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
+ K+DV+S G+ L+E+ +P + P R L+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VL G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 244
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 245 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 81 RLLGIC-LTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 136
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 137 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 196 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 244
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 245 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VL G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 88 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 144 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 203 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 251
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 252 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 281
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 568 VLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTILV 622
+LG GG V+ D + VAVK+L + + Y +F+ E + +H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 623 GYCDEGANMG----LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-NG 677
+ G ++ E++ L+ + + +R +++ +++ Q L + H NG
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I+HRDVK ANI+++ K+ DFG++R I YL PE
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 737 SNRLTEKSDVYSFGVVLLELITGQP 761
+ + +SDVYS G VL E++TG+P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 568 VLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTILV 622
+LG GG V+ D + VAVK+L + + Y +F+ E + +H + +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 623 GYCDEGANMG----LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-NG 677
+ G ++ E++ L+ + + +R +++ +++ Q L + H NG
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I+HRDVK ANI+++ K+ DFG++R I YL PE
Sbjct: 137 ----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 737 SNRLTEKSDVYSFGVVLLELITGQP 761
+ + +SDVYS G VL E++TG+P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 88 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 144 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 203 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 251
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 252 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 281
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 27/273 (9%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VL G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 88 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFGL+++ ++ E +
Sbjct: 144 -RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T +SDV+S+GV + EL+T P + +SS+L +G+ RL Q
Sbjct: 203 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE-------RLPQPPIC 251
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
T V+ I + C + RP +++IE +
Sbjct: 252 TIDVYM---IMVKCWMIDADSRPKFRELIIEFS 281
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 569 LGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTILVGYC 625
LG G + TVY G VA+K + S +G E+ L+ H+N+ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI------ASESAQGLEYLHNGCK 679
+ L++EFM N +L+ ++ D R L++ + QGL + H
Sbjct: 73 HTENKLTLVFEFMDN-DLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-- 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
I+HRD+K N+L+N++ Q KL DFGL+R F Y P+ + +R
Sbjct: 128 -KILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 740 LTEKS-DVYSFGVVLLELITGQPVIQKT 766
S D++S G +L E+ITG+P+ T
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLFPGT 212
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 83 RLLGICLT-STVQLIMQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 138
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 139 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
T +SDV+S+GV + EL+T P + +SS+L +G+
Sbjct: 198 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE 238
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+GKG FG V+ G + Q VA+K++ + + Q E+ +L + +T G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + +I E++ G+ LLE L + I E +GL+YLH+ K +HR
Sbjct: 90 LKDTKLWIIMEYLGGGS-ALDLLE--PGPLDETQIATILREILKGLDYLHSEKK---IHR 143
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+K+AN+LL+E + KLADFG++ ++ PE + K+D
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 201
Query: 746 VYSFGVVLLELITGQP 761
++S G+ +EL G+P
Sbjct: 202 IWSLGITAIELARGEP 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 107/228 (46%), Gaps = 26/228 (11%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLI 611
S D K FE++ G+G GTVY ++VA++ ++ Q K+ E+L+
Sbjct: 15 SVGDPKKKYTRFEKI-GQGASGTVYTAMDVATGQEVAIRQMNLQ--QQPKKELIINEILV 71
Query: 612 RAHHKNLTILVGYCDE---GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS--- 665
+KN I V Y D G + ++ E++A G+L D C + QIA+
Sbjct: 72 MRENKNPNI-VNYLDSYLVGDELWVVMEYLAGGSLT-----DVVTETCMDEG-QIAAVCR 124
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL-SRIFPXXXXXXXXXXXX 724
E Q LE+LH+ ++HR++KS NILL KL DFG ++I P
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSTMV 178
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTL 771
++ PE K D++S G++ +E+I G+ P + + P R L
Sbjct: 179 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 11/196 (5%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+GKG FG V+ G + Q VA+K++ + + Q E+ +L + +T G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + +I E++ G+ LLE L + I E +GL+YLH+ K +HR
Sbjct: 75 LKDTKLWIIMEYLGGGS-ALDLLE--PGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+K+AN+LL+E + KLADFG++ ++ PE + K+D
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNTFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 746 VYSFGVVLLELITGQP 761
++S G+ +EL G+P
Sbjct: 187 IWSLGITAIELARGEP 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 16/225 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ-----VAVKML-SSSSVQGYKQFQAEVELLIRAHHKNLT 619
+VLG G FGTVY G ++ + + VA+K L ++S + K+ E ++ + ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L+G C + + LI + M G L ++ E K D + + L + A+G+ YL +
Sbjct: 83 RLLGICLT-STVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR-- 138
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
+VHRD+ + N+L+ K+ DFG +++ ++ E +
Sbjct: 139 -RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
T +SDV+S+GV + EL+T P + +SS+L +G+
Sbjct: 198 YTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGE 238
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+GKG FG V+ G + Q VA+K++ + + Q E+ +L + +T G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + +I E++ G+ LLE L + I E +GL+YLH+ K +HR
Sbjct: 75 LKDTKLWIIMEYLGGGS-ALDLLE--PGPLDETQIATILREILKGLDYLHSEKK---IHR 128
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+K+AN+LL+E + KLADFG++ ++ PE + K+D
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYDSKAD 186
Query: 746 VYSFGVVLLELITGQP 761
++S G+ +EL G+P
Sbjct: 187 IWSLGITAIELARGEP 202
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 22/207 (10%)
Query: 567 RVLGKGGFGTVYH-----GYLDDKQVAVKMLSSSSV----QGYKQFQAEVELLIRAHHKN 617
RVLGKGG+G V+ G K A+K+L + + + +AE +L H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK---ADTLCWERRLQIASESAQGLEYL 674
+ L+ G + LI E+++ G L L + DT C+ +E + L +L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHL 137
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H + I++RD+K NI+LN + KL DFGL + Y+ PE
Sbjct: 138 H---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPEI 192
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQP 761
+ + D +S G ++ +++TG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 568 VLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGY--KQFQAEVELLIRAHHKNLTILVG 623
+LGKG FG V + ++ AVK+++ +S + EVELL + H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
++ ++ ++ E G L +++ K +I + G+ Y+H K IV
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH---KHNIV 143
Query: 684 HRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
HRD+K NILL K + K+ DFGLS F Y+ PE +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 741 TEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 568 VLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGY--KQFQAEVELLIRAHHKNLTILVG 623
+LGKG FG V + ++ AVK+++ +S + EVELL + H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
++ ++ ++ E G L +++ K +I + G+ Y+H K IV
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH---KHNIV 143
Query: 684 HRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
HRD+K NILL K + K+ DFGLS F Y+ PE +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 741 TEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 567 RVLGKGGFGTVYHGYLD------DKQVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLT 619
R LG+G FG V D + VAVK L + + Q ++ E+++L +H+++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 620 ILVGYCDEG--ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C++ A++ L+ E++ G+L+ +L ++ + L A + +G+ YLH
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH-- 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYI 736
+HRD+ + N+LL+ K+ DFGL++ P + PE
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL 771
+ SDV+SFGV L EL+T Q P + L
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 568 VLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGY--KQFQAEVELLIRAHHKNLTILVG 623
+LGKG FG V + ++ AVK+++ +S + EVELL + H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
++ ++ ++ E G L +++ K +I + G+ Y+H K IV
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARIIKQVFSGITYMH---KHNIV 143
Query: 684 HRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
HRD+K NILL K + K+ DFGLS F Y+ PE +
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPE-VLRGTY 199
Query: 741 TEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTP 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 538 QAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV 597
+A + SL+L+N K ++G+G +G VY G LD++ VAVK+ S ++
Sbjct: 2 EAAASEPSLDLDNLKLL------------ELIGRGRYGAVYKGSLDERPVAVKVFSFANR 49
Query: 598 QGYKQFQAEVELLIRAHHKNLTILVG----YCDEGANMGLIYEFMANGNLQAHLLEDKAD 653
Q + + + + H +VG D L+ E+ NG+L +L +D
Sbjct: 50 QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD 109
Query: 654 TLCWERRLQIASESAQGLEYLH------NGCKPPIVHRDVKSANILLNEKFQAKLADFGL 707
W ++A +GL YLH + KP I HRD+ S N+L+ ++DFGL
Sbjct: 110 ---WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166
Query: 708 S 708
S
Sbjct: 167 S 167
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 26/276 (9%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
+ E+++G G G V +G L D VA+K L + + ++ F +E ++ + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHN 676
+ L G G ++ E+M NG+L L D T+ + + + G+ YL +
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLSD 169
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYY 735
VHRD+ + N+L++ K++DFGLSR+ + PE
Sbjct: 170 ---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795
+ SDV+SFGVV+ E++ + P + + V S + G +RL
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLA----YGERPYWNMTNRDVISSVEEG-------YRLPA 275
Query: 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
++ L C H +RP +Q+V L+
Sbjct: 276 PMGCPHALH--QLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 567 RVLGKGGFGTVYH-----GYLDDKQVAVKMLSSSSV----QGYKQFQAEVELLIRAHHKN 617
RVLGKGG+G V+ G K A+K+L + + + +AE +L H
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK---ADTLCWERRLQIASESAQGLEYL 674
+ L+ G + LI E+++ G L L + DT C+ +E + L +L
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-----YLAEISMALGHL 137
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H + I++RD+K NI+LN + KL DFGL + Y+ PE
Sbjct: 138 H---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEI 192
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQP 761
+ + D +S G ++ +++TG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAP 219
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 26/276 (9%)
Query: 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKN 617
+ E+++G G G V +G L D VA+K L + + ++ F +E ++ + H N
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHN 676
+ L G G ++ E+M NG+L L D T+ + + + G+ YL +
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIM--QLVGMLRGVGAGMRYLSD 169
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXX-XXXXXXXXXXXXXXYLDPEYY 735
VHRD+ + N+L++ K++DFGLSR+ + PE
Sbjct: 170 ---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795
+ SDV+SFGVV+ E++ + P + + V S + G +RL
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLA----YGERPYWNMTNRDVISSVEEG-------YRLPA 275
Query: 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831
++ L C H +RP +Q+V L+
Sbjct: 276 PMGCPHALH--QLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 569 LGKGGFGTVYHGYLDDKQ--VAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+GKG FG VY G + + VA+K++ + + Q E+ +L + +T G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
+ + +I E++ G+ L K L I E +GL+YLH+ K +HR
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK---IHR 140
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSD 745
D+K+AN+LL+E+ KLADFG++ ++ PE + K+D
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 746 VYSFGVVLLELITGQP 761
++S G+ +EL G+P
Sbjct: 199 IWSLGITAIELAKGEP 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 566 ERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTI 620
+RVLGKG FG V + ++ AVK++S V+ ++ EV+LL + H N+
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L + ++ L+ E G L ++ K + R I + G+ Y+H K
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KN 151
Query: 681 PIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+LL K + ++ DFGLS F Y+ PE +
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPE-VLH 207
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 208 GTYDEKCDVWSTGVILYILLSGCP 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 566 ERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTI 620
+RVLGKG FG V + ++ AVK++S V+ ++ EV+LL + H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 90
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L + ++ L+ E G L ++ K + R I + G+ Y+H K
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KN 145
Query: 681 PIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+LL K + ++ DFGLS F Y+ PE +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPE-VLH 201
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCP 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY + A K++ + S + + + E+E+L H + L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 627 EGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIA-SESAQGLEYLHNGCKPPIVH 684
+ ++ EF G + A +LE D+ T E ++Q+ + + L +LH+ I+H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE-- 742
RD+K+ N+L+ + +LADFG+S ++ PE + + +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 743 ---KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
K+D++S G+ L+E+ +P + P R L+
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 224
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG VY + A K++ + S + + + E+E+L H + L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 627 EGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIA-SESAQGLEYLHNGCKPPIVH 684
+ ++ EF G + A +LE D+ T E ++Q+ + + L +LH+ I+H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 685 RDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE-- 742
RD+K+ N+L+ + +LADFG+S ++ PE + + +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 743 ---KSDVYSFGVVLLELITGQPVIQK-TPQRTLI 772
K+D++S G+ L+E+ +P + P R L+
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 567 RVLGKGGFGTVYHG-YLDDK----QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLTI 620
R+LG+G FG VY G Y + K VAVK ++ ++F +E ++ H ++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCK 679
L+G +E +I E G L H LE ++L + + + + + YL + C
Sbjct: 74 LIGIIEEEPTW-IIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 130
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
VHRD+ NIL+ KL DFGLSR + ++ PE R
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 186
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T SDV+ F V + E+++ K P L + V +L +GD RL + D
Sbjct: 187 FTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD-------RLPKPDLC 235
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
++ + C + RP ++V L+D ME
Sbjct: 236 PPVLYT---LMTRCWDYDPSDRPRFTELVCSLSDVYQME 271
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 567 RVLGKGGFGTVYHG-YLDDK----QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLTI 620
R+LG+G FG VY G Y + K VAVK ++ ++F +E ++ H ++
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCK 679
L+G +E +I E G L H LE ++L + + + + + YL + C
Sbjct: 90 LIGIIEEEPTW-IIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 146
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
VHRD+ NIL+ KL DFGLSR + ++ PE R
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 202
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T SDV+ F V + E+++ K P L + V +L +GD RL + D
Sbjct: 203 FTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD-------RLPKPDLC 251
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
++ + C + RP ++V L+D ME
Sbjct: 252 PPVLYT---LMTRCWDYDPSDRPRFTELVCSLSDVYQME 287
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 568 VLGKGGFGTVYHGYLD---DKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTIL 621
+LG GG V H D + VAVK+L + + Y +F+ E + +H + +
Sbjct: 19 ILGFGGMSEV-HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 622 VGYCDEGANMG----LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-N 676
+ G ++ E++ L+ + + +R +++ +++ Q L + H N
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYY 735
G I+HRDVK ANI+++ K+ DFG++R I YL PE
Sbjct: 136 G----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+ + +SDVYS G VL E++TG+P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 19/219 (8%)
Query: 568 VLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYC 625
++G G +G VY G ++ Q+A + + ++ + E+ +L + +HH+N+ G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 626 DEGANMG------LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+ G L+ EF G++ + K +TL E I E +GL +LH +
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---Q 147
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
++HRD+K N+LL E + KL DFG+S ++ PE +
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 740 LTE-----KSDVYSFGVVLLELITGQ-PVIQKTPQRTLI 772
+ KSD++S G+ +E+ G P+ P R L
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF 244
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 566 ERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTI 620
+RVLGKG FG V + ++ AVK++S V+ ++ EV+LL + H N+
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 113
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L + ++ L+ E G L ++ K + R I + G+ Y+H K
Sbjct: 114 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KN 168
Query: 681 PIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+LL K + ++ DFGLS F Y+ PE +
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPE-VLH 224
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 225 GTYDEKCDVWSTGVILYILLSGCP 248
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 566 ERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTI 620
+RVLGKG FG V + ++ AVK++S V+ ++ EV+LL + H N+
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 114
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L + ++ L+ E G L ++ K + R I + G+ Y+H K
Sbjct: 115 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMH---KN 169
Query: 681 PIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+LL K + ++ DFGLS F Y+ PE +
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPE-VLH 225
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 226 GTYDEKCDVWSTGVILYILLSGCP 249
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 29/279 (10%)
Query: 567 RVLGKGGFGTVYHG-YLDDK----QVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLTI 620
R+LG+G FG VY G Y + K VAVK ++ ++F +E ++ H ++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCK 679
L+G +E +I E G L H LE ++L + + + + + YL + C
Sbjct: 78 LIGIIEEEPTW-IIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC- 134
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
VHRD+ NIL+ KL DFGLSR + ++ PE R
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESINFRR 190
Query: 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL-QGDFD 798
T SDV+ F V + E+++ K P L + V +L +GD RL + D
Sbjct: 191 FTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGD-------RLPKPDLC 239
Query: 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837
++ + C + RP ++V L+D ME
Sbjct: 240 PPVLYT---LMTRCWDYDPSDRPRFTELVCSLSDVYQME 275
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQ-GYKQFQAEVELLIRAHHKN--- 617
+ V+G G V Y K+ VA+K ++ Q + E++ + + HH N
Sbjct: 13 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 618 ----------LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES 667
L +++ G+ + +I +A G ++ +L++ I E
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA-------TILREV 125
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GLEYLH + +HRDVK+ NILL E ++ADFG+S
Sbjct: 126 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 728 X---YLDPEYYISNRLTE-KSDVYSFGVVLLELITGQPVIQKTP 767
++ PE R + K+D++SFG+ +EL TG K P
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 568 VLGKGGFGTVYHGYLD---DKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTIL 621
+LG GG V H D + VAVK+L + + Y +F+ E + +H + +
Sbjct: 19 ILGFGGMSEV-HLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 622 VGYCDEGANMG----LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-N 676
+ G ++ E++ L+ + + +R +++ +++ Q L + H N
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQN 135
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFPXXXXXXXXXXXXXXXXYLDPEYY 735
G I+HRDVK ANI+++ K+ DFG++R I YL PE
Sbjct: 136 G----IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+ + +SDVYS G VL E++TG+P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEP 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 134
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQ-GYKQFQAEVELLIRAHHKNLT- 619
+ V+G G V Y K+ VA+K ++ Q + E++ + + HH N+
Sbjct: 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 620 ------------ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES 667
+++ G+ + +I +A G ++ +L++ I E
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA-------TILREV 130
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GLEYLH + +HRDVK+ NILL E ++ADFG+S
Sbjct: 131 LEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 728 X---YLDPEYYISNRLTE-KSDVYSFGVVLLELITGQPVIQKTP 767
++ PE R + K+D++SFG+ +EL TG K P
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 34/215 (15%)
Query: 569 LGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN--------- 617
LG GG G V+ +D K+VA+K + + Q K E++++ R H N
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 618 -----LTILVGYCDEGANMGLIYEFM----ANGNLQAHLLEDKADTLCWERRLQIASESA 668
LT VG E ++ ++ E+M AN Q LLE+ A ++
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQL--------L 130
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIF-PXXXXXXXXXXXXXX 726
+GL+Y+H+ ++HRD+K AN+ +N E K+ DFGL+RI P
Sbjct: 131 RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 727 XXYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQ 760
Y P +S N T+ D+++ G + E++TG+
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 655 LCWERRLQIASESAQGLEYLH-NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR-IFP 712
+ +R +++ +++ Q L + H NG I+HRDVK ANI+++ K+ DFG++R I
Sbjct: 130 MTPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE + + +SDVYS G VL E++TG+P
Sbjct: 186 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 547 ELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ 604
E+E K FDV + + G+G +G V Y + +VA+K +S Q Y Q
Sbjct: 30 EVEMVKGQPFDVGPRYTQLQYI-GEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 605 -AEVELLIRAHHKNLT----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA--DTLCW 657
E+++L+R H+N+ IL E I + + +L L + D +C+
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY 148
Query: 658 ERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXX 716
+ +GL+Y+H+ ++HRD+K +N+L+N K+ DFGL+RI P
Sbjct: 149 -----FLYQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPV 762
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 567 RVLGKGGFGTVY-----HGYLDDKQVAVKMLSSSSVQGYKQFQAEVE--LLIRAHHKNLT 619
+VLG+G FG V+ G + A+K+L ++++ + + ++E +L+ +H +
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI-ASESAQGLEYLHNGC 678
L + LI +F+ G+L L + + E ++ +E A L++LH+
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDHLHSLG 146
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
I++RD+K NILL+E+ KL DFGLS+ Y+ PE
Sbjct: 147 ---IIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 739 RLTEKSDVYSFGVVLLELITG 759
T+ +D +SFGV++ E++TG
Sbjct: 202 GHTQSADWWSFGVLMFEMLTG 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 566 ERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTI 620
+RVLGKG FG V + ++ AVK++S V+ ++ EV+LL + H N+
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXK 90
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L + ++ L+ E G L ++ K + R I + G+ Y H K
Sbjct: 91 LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXH---KN 145
Query: 681 PIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+LL K + ++ DFGLS F Y+ PE +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKXKDKIGTAYYIAPE-VLH 201
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
EK DV+S GV+L L++G P
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCP 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 134
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 135 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 24 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 135
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 136 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 192
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 25 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 83
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 136
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 137 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 193
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 194 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 16 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 74
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 127
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 128 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 184
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 185 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 134
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 135 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 567 RVLGKGGFGTVYHGYLD------DKQVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLT 619
R LG+G FG V D + VAVK L + Q ++ E+++L +H+++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 620 ILVGYC-DEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D+G ++ L+ E++ G+L+ +L ++ + L A + +G+ YLH+
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHS- 135
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYI 736
+HR++ + N+LL+ K+ DFGL++ P + PE
Sbjct: 136 --QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL 771
+ SDV+SFGV L EL+T Q P + L
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 35/321 (10%)
Query: 555 YFDVLKITNNFERVLGKGGFGTVYHGYLDD--KQVAVK-MLSSSSVQGYKQF-QAEVELL 610
YF ++ N V G+G +G V D + VA+K L S + K+ E++LL
Sbjct: 20 YFQSMEKYENLGLV-GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLL 78
Query: 611 IRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQG 670
+ H+NL L+ C + L++EF+ + L LE + L ++ + + G
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD--LELFPNGLDYQVVQKYLFQIING 136
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
+ + H+ I+HRD+K NIL+++ KL DFG +R Y
Sbjct: 137 IGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLA--APGEVYDDEVATRWYR 191
Query: 731 DPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789
PE + + + + DV++ G ++ E+ G+P+ P + I Q M+ G++
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF---PGDSDIDQLYHIMMCLGNLIP-- 246
Query: 790 DHRLQGDFDTNTVWKAVEI-ALACIHTISTRRPTMNQVVIEL-NDCLAMEIARTKAHETA 847
R Q F+ N V+ V + + + R P +++VVI+L CL ++
Sbjct: 247 --RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHID---------- 294
Query: 848 PDGTPDELMIDLNLHSDVFPL 868
PD P +L LH D F +
Sbjct: 295 PDKRP--FCAEL-LHHDFFQM 312
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 17 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 128
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 129 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQ----AHLLEDKADTLCWERRLQI 663
H+N+ I ++ ++ ++ + M + HL D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHL---SNDHICY-----F 133
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXX 722
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 134 LYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 723 XXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVY-----HGYLDDKQVAVKMLSSSSVQGYKQFQAEVE 608
S F++LK VLG+G FG V+ G + A+K+L ++++ + + ++E
Sbjct: 24 SQFELLK-------VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 76
Query: 609 --LLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI-AS 665
+L+ +H + L + LI +F+ G+L L + + E ++ +
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLA 133
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
E A L++LH+ I++RD+K NILL+E+ KL DFGLS+
Sbjct: 134 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 188
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y+ PE T+ +D +SFGV++ E++TG
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 562 TNNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ----AEVELLIRAH- 614
T+ +E V +G G +GTVY V + S G + EV LL R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 615 --HKNLTILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES 667
H N+ L+ C D + L++E + + +L+ +L + L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GL++LH C IVHRD+K NIL+ KLADFGL+RI+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALAPVVVTL 175
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
Y PE + + D++S G + E+ +P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVY-----HGYLDDKQVAVKMLSSSSVQGYKQFQAEVE 608
S F++LK VLG+G FG V+ G + A+K+L ++++ + + ++E
Sbjct: 25 SQFELLK-------VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKME 77
Query: 609 --LLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI-AS 665
+L+ +H + L + LI +F+ G+L L + + E ++ +
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLA 134
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
E A L++LH+ I++RD+K NILL+E+ KL DFGLS+
Sbjct: 135 ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCG 189
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y+ PE T+ +D +SFGV++ E++TG
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 134
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 135 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 191
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 24 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 82
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 135
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 136 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX 192
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA+K +S Q Y Q E+++L+R
Sbjct: 17 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLR 75
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 128
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 129 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 185
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 186 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 619 TILVGYC---DEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYL 674
L +C DE GL Y NG L ++ + D C R A E LEYL
Sbjct: 100 VKLY-FCFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYL 153
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 154 HGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 211 LTEKSACKSSDLWALGCIIYQLVAGLP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 39 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ L+ M G LL+ + D +C+
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYLVTHLM--GADLYKLLKTQHLSNDHICY-----FL 150
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 569 LGKGGFGTVY--HGYLDDKQVAVKML---SSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
LG GG TVY + + +VA+K + + K+F+ EV + H+N+ ++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+E L+ E++ L ++ + L + + ++ G+++ H+ IV
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHD---MRIV 133
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K NIL++ K+ DFG+++ Y PE E
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 744 SDVYSFGVVLLELITGQP 761
+D+YS G+VL E++ G+P
Sbjct: 193 TDIYSIGIVLYEMLVGEP 210
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG 628
+GKG +G V+ G ++VAVK+ ++ + + + E+ + H+N+ + +G
Sbjct: 45 IGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFR-ETEIYQTVLMRHENILGFIAADIKG 103
Query: 629 AN----MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC-----K 679
+ LI ++ NG+L +L K+ TL + L++A S GL +LH K
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGK 160
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX--XXXXXXXXYLDPEYYIS 737
P I HRD+KS NIL+ + +AD GL+ F Y+ PE
Sbjct: 161 PAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE 220
Query: 738 --NRLTEKS----DVYSFGVVLLEL 756
NR +S D+YSFG++L E+
Sbjct: 221 SLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 564 NFERVLGKGGFGTVY----HGYLDDKQ---VAVKMLS-SSSVQGYKQFQAEVELL-IRAH 614
+F + LG G FG V +G + VAVKML S+ + + +E+++L +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI----------- 663
H N+ L+G C G +I E+ G+L L + +C + I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 664 -----ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXX 718
+ + A+G+ +L + +HRD+ + NILL K+ DFGL+R
Sbjct: 146 DLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 719 XXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT-------GQPVIQK 765
++ PE + T +SDV+S+G+ L EL + G PV K
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 564 NFERVLGKGGFGTVY----HGYLDDKQ---VAVKMLS-SSSVQGYKQFQAEVELL-IRAH 614
+F + LG G FG V +G + VAVKML S+ + + +E+++L +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI----------- 663
H N+ L+G C G +I E+ G+L L + +C + I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 664 -----ASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+ + A+G+ +L + C +HRD+ + NILL K+ DFGL+R
Sbjct: 162 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT-------GQPVIQK 765
++ PE + T +SDV+S+G+ L EL + G PV K
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 272
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 562 TNNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ----AEVELLIRAH- 614
T+ +E V +G G +GTVY V + S G + EV LL R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 615 --HKNLTILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES 667
H N+ L+ C D + L++E + + +L+ +L + L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GL++LH C IVHRD+K NIL+ KLADFGL+RI+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALDPVVVTL 175
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
Y PE + + D++S G + E+ +P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 567 RVLGKGGFGTVYHGYLD------DKQVAVKMLSS-SSVQGYKQFQAEVELLIRAHHKNLT 619
R LG+G FG V D + VAVK L + Q ++ E+++L +H+++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 620 ILVGYC-DEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D+G ++ L+ E++ G+L+ +L ++ + L A + +G+ YLH
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLH-- 134
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYI 736
+HR++ + N+LL+ K+ DFGL++ P + PE
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL 771
+ SDV+SFGV L EL+T Q P + L
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 562 TNNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ----AEVELLIRAH- 614
T+ +E V +G G +GTVY V + S G + EV LL R
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 615 --HKNLTILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES 667
H N+ L+ C D + L++E + + +L+ +L + L E + +
Sbjct: 63 FEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GL++LH C IVHRD+K NIL+ KLADFGL+RI+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALFPVVVTL 175
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
Y PE + + D++S G + E+ +P+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 211
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 130
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 564 NFERVLGKGGFGTVY----HGYLDDKQ---VAVKMLS-SSSVQGYKQFQAEVELL-IRAH 614
+F + LG G FG V +G + VAVKML S+ + + +E+++L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI----------- 663
H N+ L+G C G +I E+ G+L L + +C + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 664 -----ASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+ + A+G+ +L + C +HRD+ + NILL K+ DFGL+R
Sbjct: 169 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT-------GQPVIQK 765
++ PE + T +SDV+S+G+ L EL + G PV K
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 564 NFERVLGKGGFGTVY----HGYLDDKQ---VAVKMLS-SSSVQGYKQFQAEVELL-IRAH 614
+F + LG G FG V +G + VAVKML S+ + + +E+++L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI----------- 663
H N+ L+G C G +I E+ G+L L + +C + I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 664 -----ASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+ + A+G+ +L + C +HRD+ + NILL K+ DFGL+R
Sbjct: 169 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT-------GQPVIQK 765
++ PE + T +SDV+S+G+ L EL + G PV K
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 279
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y L+ +VA++ +S Q Y Q E+++L+R
Sbjct: 23 FDVGPRYTNLSYI-GEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLR 81
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 134
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 135 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 191
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 37/235 (15%)
Query: 564 NFERVLGKGGFGTVY----HGYLDDKQ---VAVKMLS-SSSVQGYKQFQAEVELL-IRAH 614
+F + LG G FG V +G + VAVKML S+ + + +E+++L +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI----------- 663
H N+ L+G C G +I E+ G+L L + +C + I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 664 -----ASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXX 717
+ + A+G+ +L + C +HRD+ + NILL K+ DFGL+R
Sbjct: 164 DLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 718 XXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELIT-------GQPVIQK 765
++ PE + T +SDV+S+G+ L EL + G PV K
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 274
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 556 FDVLKITNNFERV--LGKGGFGTVYHGYLDDKQ----VAVKMLS----SSSVQGYKQFQA 605
DV +E++ LG+G F TVY DK VA+K + S + G +
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 606 -EVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA 664
E++LL H N+ L+ +N+ L+++FM +L+ +++D + L
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEV-IIKDNSLVLTPSHIKAYM 118
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ QGLEYLH I+HRD+K N+LL+E KLADFGL++ F
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQV 173
Query: 725 XXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE R+ D+++ G +L EL+ P +
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFL 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 130
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 131 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPV 762
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 130
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 131 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRA 613
FDVL+ LG+G +G+VY + + VA+K + S ++ E+ ++ +
Sbjct: 31 FDVLE-------KLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQC 81
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
++ G + ++ ++ E+ G++ + ++ + TL + I + +GLEY
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSV-SDIIRLRNKTLTEDEIATILQSTLKGLEY 140
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
LH K +HRD+K+ NILLN + AKLADFG++ ++ PE
Sbjct: 141 LHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPE 195
Query: 734 YYISNRLTEKSDVYSFGVVLLELITGQP 761
+D++S G+ +E+ G+P
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGKP 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 79
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 132
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 133 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 39 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 97
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 150
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 207
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 568 VLGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
VLGKG +G VY G QV A+K + + + E+ L HKN+ +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 626 DEGANMGLIYEFMANGNLQAHL------LEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
E + + E + G+L A L L+D T+ + + +GL+YLH+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF-----YTKQILEGLKYLHDN-- 141
Query: 680 PPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
IVHRD+K N+L+N K++DFG S+ Y+ PE
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKG 198
Query: 739 --RLTEKSDVYSFGVVLLELITGQP 761
+ +D++S G ++E+ TG+P
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKP 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 569 LGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLT-----I 620
+G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R H+N+ I
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIASESAQGLEYLHNG 677
++ ++ ++ + M + LL+ + D +C+ + +GL+Y+H+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FLYQILRGLKYIHSA 143
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K +N+LLN K+ DFGL+R+ P Y PE +
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 737 SNRLTEKS-DVYSFGVVLLELITGQPV 762
+++ KS D++S G +L E+++ +P+
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPI 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 24/219 (10%)
Query: 562 TNNFERV--LGKGGFGTVYHG-------YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR 612
T+ +E V +G G +GTVY ++ K V V EV LL R
Sbjct: 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRR 67
Query: 613 AH---HKNLTILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA 664
H N+ L+ C D + L++E + + +L+ +L + L E +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ +GL++LH C IVHRD+K NIL+ KLADFGL+RI+
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY---SYQMALTPVV 180
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
Y PE + + D++S G + E+ +P+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 22/233 (9%)
Query: 539 AGKKKGSLELENRKFSYF--DVLKITNNFERVLGKGGFGTVYHG--YLDDKQVAVKMLSS 594
AG + GSL+ + +F D K+ ++ R +G G FG VY + + VA+K +S
Sbjct: 31 AGGRAGSLKDPDVAELFFKDDPEKLFSDL-REIGHGSFGAVYFARDVRNSEVVAIKKMSY 89
Query: 595 SSVQGYKQFQ---AEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK 651
S Q +++Q EV L + H N G L+ E+ + LLE
Sbjct: 90 SGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS--ASDLLEVH 147
Query: 652 ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF 711
L + + QGL YLH+ ++HRDVK+ NILL+E KL DFG + I
Sbjct: 148 KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
Query: 712 PXXXXXXXXXXXXXXXXYLDPEYYIS---NRLTEKSDVYSFGVVLLELITGQP 761
++ PE ++ + K DV+S G+ +EL +P
Sbjct: 205 ------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 568 VLGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
VLGKG +G VY G QV A+K + + + E+ L HKN+ +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 626 DEGANMGLIYEFMANGNLQAHL------LEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
E + + E + G+L A L L+D T+ + + + +GL+YLH+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN-- 127
Query: 680 PPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
IVHRD+K N+L+N K++DFG S+ Y+ PE
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEIIDKG 184
Query: 739 --RLTEKSDVYSFGVVLLELITGQP 761
+ +D++S G ++E+ TG+P
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKP 209
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 27 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 85
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 138
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 139 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 195
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 196 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+R
Sbjct: 19 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 77
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 130
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 131 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 187
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 188 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 19/221 (8%)
Query: 550 NRKFSYFD-VLKITNNFERVLGKGGFGTVYHGYLDDKQ---VAVKMLS-SSSVQGYKQFQ 604
R+ YF +++ E+V G+G +G VY D Q VA+K + + +G
Sbjct: 10 GRENLYFQGLMEKYQKLEKV-GEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTA 66
Query: 605 A-EVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
E+ LL HH N+ L+ + L++EFM +L+ L E+K T + +++I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENK--TGLQDSQIKI 123
Query: 664 -ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+ +G+ + H + I+HRD+K N+L+N KLADFGL+R F
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTH 178
Query: 723 XXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y P+ + S + + D++S G + E+ITG+P+
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 19/221 (8%)
Query: 550 NRKFSYFD-VLKITNNFERVLGKGGFGTVYHGYLDDKQ---VAVKMLS-SSSVQGYKQFQ 604
R+ YF +++ E+V G+G +G VY D Q VA+K + + +G
Sbjct: 10 GRENLYFQGLMEKYQKLEKV-GEGTYGVVYKA--KDSQGRIVALKRIRLDAEDEGIPSTA 66
Query: 605 -AEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
E+ LL HH N+ L+ + L++EFM +L+ L E+K T + +++I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENK--TGLQDSQIKI 123
Query: 664 -ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX 722
+ +G+ + H + I+HRD+K N+L+N KLADFGL+R F
Sbjct: 124 YLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTH 178
Query: 723 XXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y P+ + S + + D++S G + E+ITG+P+
Sbjct: 179 EVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 47/218 (21%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN----------- 617
+GKG +G V+ G + VAVK+ SS Q + + + E+ + H N
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMTS 74
Query: 618 ------LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
L ++ Y + G+ +Y+F+ L+ HL L++A +A GL
Sbjct: 75 RNSSTQLWLITHYHEHGS----LYDFLQRQTLEPHLA------------LRLAVSAACGL 118
Query: 672 EYLH-----NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX--XX 724
+LH KP I HRD KS N+L+ Q +AD GL+ +
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 725 XXXXYLDPEYYISNRLTE------KSDVYSFGVVLLEL 756
Y+ PE T+ +D+++FG+VL E+
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 129
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLP 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 128
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 126
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLP 207
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 559 LKITN-NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIR 612
LKI + ++LGKG FG V+ ++ A+K L V + E +L
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 613 A-HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
A H LT + N+ + E++ G+L H+ R A+E GL
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGL 132
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
++LH+ IV+RD+K NILL++ K+ADFG+ + Y+
Sbjct: 133 QFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIA 187
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE + + D +SFGV+L E++ GQ
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVY---------HGYLDDKQVAVKMLSSSSVQGYKQFQ 604
S+F++LK VLG+G FG V+ G+L A+K+L ++++ + +
Sbjct: 28 SHFELLK-------VLGQGSFGKVFLVRKVTRPDSGHL----YAMKVLKKATLKVRDRVR 76
Query: 605 AEVELLIRA---HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
++E I A H + + + EG + LI +F+ G+L L + + E +
Sbjct: 77 TKMERDILADVNHPFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRL---SKEVMFTEEDV 132
Query: 662 QI-ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX 720
+ +E A GL++LH+ I++RD+K NILL+E+ KL DFGLS+
Sbjct: 133 KFYLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKA 187
Query: 721 XXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y+ PE + +D +S+GV++ E++TG
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILV 622
+ +GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 104
Query: 623 GYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH----- 675
D G + L+ ++ +G+L +L T+ E +++A +A GL +LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 161
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
KP I HRD+KS NIL+ + +AD GL+
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRA-HHKNLTI 620
++LGKG FG V+ ++ A+K L V + E +L A H LT
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ N+ + E++ G+L H+ R A+E GL++LH+
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS---K 137
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
IV+RD+K NILL++ K+ADFG+ + Y+ PE + +
Sbjct: 138 GIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 741 TEKSDVYSFGVVLLELITGQ 760
D +SFGV+L E++ GQ
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQ 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 127
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLP 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
++ SD+++ G ++ +L+ G P
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLP 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 152
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLP 232
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 11/199 (5%)
Query: 569 LGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGYC 625
LG+G + TVY G L D VA+K + +G EV LL H N+ L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
++ L++E++ + +L+ +L +D + + + +GL Y H + ++HR
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHR 124
Query: 686 DVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI-SNRLTEKS 744
D+K N+L+NE+ + KLADFGL+R Y P+ + S + +
Sbjct: 125 DLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 745 DVYSFGVVLLELITGQPVI 763
D++ G + E+ TG+P+
Sbjct: 183 DMWGVGCIFYEMATGRPLF 201
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 152
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLP 233
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILV 622
+ +GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 91
Query: 623 GYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH----- 675
D G + L+ ++ +G+L +L T+ E +++A +A GL +LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 148
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
KP I HRD+KS NIL+ + +AD GL+
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLP 230
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILVGYCD 626
+GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I D
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 70
Query: 627 EGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-----NGCK 679
G + L+ ++ +G+L +L T+ E +++A +A GL +LH K
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLS 708
P I HRD+KS NIL+ + +AD GL+
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 567 RVLGKGGFGTVYHGYLD------DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLT 619
R LG+G FG V D + VAVK L Q +Q E+E+L +H+++
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 620 ILVGYC-DEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D+G ++ L+ E++ G+L+ +L + + L A + +G+ YLH
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLH-- 128
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYI 736
+HR + + N+LL+ K+ DFGL++ P + PE
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ SDV+SFGV L EL+T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLP 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 567 RVLGKGGFGTVYHGYLD------DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLT 619
R LG+G FG V D + VAVK L Q +Q E+E+L +H+++
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 620 ILVGYC-DEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G C D+G ++ L+ E++ G+L+ +L + + L A + +G+ YLH
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLH-- 129
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY-LDPEYYI 736
+HR + + N+LL+ K+ DFGL++ P + PE
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 737 SNRLTEKSDVYSFGVVLLELIT 758
+ SDV+SFGV L EL+T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLP 232
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILVGYCD 626
+GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I D
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAADNKD 69
Query: 627 EGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-----NGCK 679
G + L+ ++ +G+L +L T+ E +++A +A GL +LH K
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLS 708
P I HRD+KS NIL+ + +AD GL+
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLP 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 619 TILVGYC--DEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLH 675
L DE GL Y NG L ++ + D C R A E LEYLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLH 131
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLP 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILV 622
+ +GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 68
Query: 623 GYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH----- 675
D G + L+ ++ +G+L +L T+ E +++A +A GL +LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 125
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
KP I HRD+KS NIL+ + +AD GL+
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 154
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLP 235
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 13/153 (8%)
Query: 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILV 622
+ +GKG FG V+ G ++VAVK+ SS + + + +AE+ + H+N+ I
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFR-EAEIYQTVMLRHENILGFIAA 71
Query: 623 GYCDEGA--NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH----- 675
D G + L+ ++ +G+L +L T+ E +++A +A GL +LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVG 128
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
KP I HRD+KS NIL+ + +AD GL+
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLP 232
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 619 TILVGYC--DEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLH 675
L DE GL Y NG L ++ + D C R A E LEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLH 146
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLP 232
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 569 LGKGGFGTVYHGY--LDDKQ--VAVKMLSSSSVQG-YKQFQAEVELLIRAHHKNLTILVG 623
LG G FG+V G + KQ VA+K+L + + ++ E +++ + + + L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
C A M L+ E G L L+ K + + ++ + + G++YL + V
Sbjct: 78 VCQAEALM-LVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNRLTE 742
HRD+ + N+LL + AK++DFGLS+ + PE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 743 KSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARG 783
+SDV+S+GV + E ++ GQ P + + G V + + +G
Sbjct: 193 RSDVWSYGVTMWEALSYGQ-----KPYKKMKGPEVMAFIEQG 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 16/206 (7%)
Query: 564 NFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F TV ++ A+K+L + + E +++ R H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 619 TILVGYC--DEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLH 675
L DE GL Y NG L ++ + D C R A E LEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSY--AKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLH 146
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 147 G---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLP 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 10/228 (4%)
Query: 555 YFDVLKITNNFERVLGKGGFGT--VYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELL 610
YF ++ +++ G+G FG + D +Q +K ++ S S + ++ + EV +L
Sbjct: 19 YFQSMEKYVRLQKI-GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL 77
Query: 611 IRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQG 670
H N+ +E ++ ++ ++ G+L + K ++ L +
Sbjct: 78 ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
L+++H+ I+HRD+KS NI L + +L DFG++R+ YL
Sbjct: 138 LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTPYYL 192
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSS 778
PE + KSD+++ G VL EL T + + + L+ + +S
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 566 ERVLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHHKNLTI 620
E+ +G+G F VY LD VA+K + + K E++LL + +H N+
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 621 LVGYCDEGANMGLIYEFMANGNLQ---AHLLEDK---ADTLCWERRLQIASESAQGLEYL 674
E + ++ E G+L H + K + W+ +Q+ S LE++
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS----ALEHM 152
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ ++HRD+K AN+ + KL D GL R F Y+ PE
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSPER 207
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQ 760
N KSD++S G +L E+ Q
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQ 233
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + + +++ + + G++YL +
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLE---E 145
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 247
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 32 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 91
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + + +++ + + G++YL +
Sbjct: 92 RMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLE---E 145
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 247
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 30 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 89
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + + +++ + + G++YL +
Sbjct: 90 RMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLE---E 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 245
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 132
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 133 YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + +++ + + G++YL +
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE---E 129
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 24/228 (10%)
Query: 568 VLGKGGFGTVYHGYLDDKQVAVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
++GKG FG VYHG +VA+++ + + K F+ EV + H+N+ + +G C
Sbjct: 40 LIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
++ +I + G ++ D L + QIA E +G+ YLH I+H+
Sbjct: 99 MSPPHLAIITS-LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 686 DVKSANILLNEKFQAKLADFGL---SRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-- 740
D+KS N+ + + + DFGL S + +L PE I +L
Sbjct: 155 DLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE--IIRQLSP 211
Query: 741 ---------TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779
++ SDV++ G + EL + + P +I Q + M
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM 259
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 567 RVLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHHKNLTIL 621
R +G G FG VY + + VA+K +S S Q +++Q EV L + H N
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
G L+ E+ + LLE L + + QGL YLH+
Sbjct: 81 RGCYLREHTAWLVMEYCLGS--ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS---N 738
++HRDVK+ NILL+E KL DFG + I ++ PE ++
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVILAMDEG 189
Query: 739 RLTEKSDVYSFGVVLLELITGQP 761
+ K DV+S G+ +EL +P
Sbjct: 190 QYDGKVDVWSLGITCIELAERKP 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 433
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + + +++ + + G++YL +
Sbjct: 434 RMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLE---E 487
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX-XXXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 739 RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + + P R + G V++ML +G+
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS----YGQKPYRGMKGSEVTAMLEKGE 589
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 564 NFERVLGKGGFGT--VYHGYLDDKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNL 618
F ++LG+G F T + ++ A+K+L + + E +++ R H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNG 677
L + + + NG L ++ + D C R A E LEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC--TRFYTA-EIVSALEYLHGK 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K NILLNE ++ DFG +++ Y+ PE
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
+ SD+++ G ++ +L+ G P
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLP 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVK-----MLSSSSVQGYK-QFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY K+V + + ++ K + AE ++ + + +
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + +++ + + G++YL +
Sbjct: 76 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE---E 129
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 231
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 569 LGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYK---QFQAEVELLIRAHHKNLTILVG 623
LG G FG V G L +VAVK+L+ ++ + + E++ L H ++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL--QIASESAQGLEYLHNGCKPP 681
+++ ++ E+++ G L ++ ++ RRL QI S G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS----GVDYCHRHM--- 136
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+VHRD+K N+LL+ AK+ADFGLS + Y PE IS RL
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRXSCGSPNYAAPE-VISGRLY 192
Query: 742 E--KSDVYSFGVVLLELITG 759
+ D++S GV+L L+ G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 375 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 434
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + + +++ + + G++YL +
Sbjct: 435 RMIGICEAESWM-LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLE---E 488
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX-XXXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 739 RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + + P R + G V++ML +G+
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS----YGQKPYRGMKGSEVTAMLEKGE 590
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVK-----MLSSSSVQGYK-QFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY K+V + + ++ K + AE ++ + + +
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + +++ + + G++YL +
Sbjct: 72 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE---E 125
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 558 VLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQ--------GYKQFQAEVEL 609
V K T RVLGKGGFG V + + KM + ++ G E ++
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQV---RATGKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
L + + + + L + + L+ M G+L+ H+ R + A+E
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
GLE LH + IV+RD+K NILL++ +++D GL+ P Y
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGY 351
Query: 730 LDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR 769
+ PE + R T D ++ G +L E+I GQ Q+ ++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY V + ++ + AE ++ + + +
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + +++ + + G++YL +
Sbjct: 70 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE---E 123
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY---- 624
+GKG +G V+ G + VAVK+ SS + + + + E+ + H+N+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 74
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTL-CWERRLQIASESAQGLEYLH-----NGC 678
+ LI + G+L +L DT+ C L+I A GL +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQG 130
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX--XXXXXXYLDPEYYI 736
KP I HRD+KS NIL+ + Q +AD GL+ + Y+ PE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 737 SNRLTE------KSDVYSFGVVLLEL 756
+ + D+++FG+VL E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 558 VLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQ--------GYKQFQAEVEL 609
V K T RVLGKGGFG V + + KM + ++ G E ++
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQV---RATGKMYACKKLEKKRIKKRKGEAMALNEKQI 237
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
L + + + + L + + L+ M G+L+ H+ R + A+E
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
GLE LH + IV+RD+K NILL++ +++D GL+ P Y
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVGTVGY 351
Query: 730 LDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR 769
+ PE + R T D ++ G +L E+I GQ Q+ ++
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 568 VLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTILV 622
+LGKG F VY +VA+KM+ ++ ++ Q EV++ + H ++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y ++ + L+ E NG + +L +++ + G+ YLH+ I
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPFSENEARHFMHQIITGMLYLHS---HGI 133
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRD+ +N+LL K+ADFGL+ Y+ PE +
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLAT--QLKMPHEKHYTLCGTPNYISPEIATRSAHGL 191
Query: 743 KSDVYSFGVVLLELITGQP 761
+SDV+S G + L+ G+P
Sbjct: 192 ESDVWSLGCMFYTLLIGRP 210
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY---- 624
+GKG +G V+ G + VAVK+ SS + + + + E+ + H+N+ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 74
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTL-CWERRLQIASESAQGLEYLH-----NGC 678
+ LI + G+L +L DT+ C L+I A GL +LH
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQG 130
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX--XXXXXXYLDPEYYI 736
KP I HRD+KS NIL+ + Q +AD GL+ + Y+ PE
Sbjct: 131 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 190
Query: 737 SNRLTE------KSDVYSFGVVLLEL 756
+ + D+++FG+VL E+
Sbjct: 191 ETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 11 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYL 124
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 125 LYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPY 178
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIR 612
FDV N + G+G +G V Y ++ +VA+K +S Q Y Q E+++L+
Sbjct: 21 FDVGPRYTNLSYI-GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLA 79
Query: 613 AHHKNLT-----ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA---DTLCWERRLQIA 664
H+N+ I ++ ++ ++ + M + LL+ + D +C+
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK--LLKTQHLSNDHICY-----FL 132
Query: 665 SESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF-PXXXXXXXXXXX 723
+ +GL+Y+H+ ++HRD+K +N+LLN K+ DFGL+R+ P
Sbjct: 133 YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY 189
Query: 724 XXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITGQPVI 763
Y PE ++++ KS D++S G +L E+++ +P+
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 19/227 (8%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVK-----MLSSSSVQGYK-QFQAEVELLIRAHHKNLT 619
++ LG G FGTV GY K+V + + ++ K + AE ++ + + +
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
++G C+ + M L+ E G L +L +++ + +++ + + G++YL +
Sbjct: 82 RMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLE---E 135
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISN 738
VHRD+ + N+LL + AK++DFGLS+ + PE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 739 RLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784
+ + KSDV+SFGV++ E + GQ P R + G V++ML +G+
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQ-----KPYRGMKGSEVTAMLEKGE 237
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGY---- 624
+GKG +G V+ G + VAVK+ SS + + + + E+ + H+N+ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMTS 103
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTL-CWERRLQIASESAQGLEYLH-----NGC 678
+ LI + G+L +L DT+ C L+I A GL +LH
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC----LRIVLSIASGLAHLHIEIFGTQG 159
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXX--XXXXXXYLDPEYYI 736
KP I HRD+KS NIL+ + Q +AD GL+ + Y+ PE
Sbjct: 160 KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD 219
Query: 737 SNRLTE------KSDVYSFGVVLLEL 756
+ + D+++FG+VL E+
Sbjct: 220 ETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 125
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 186 PVDVWSCGIVLTAMLAGE 203
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 561 ITNNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRA 613
+++ ++RV LG G +G V L + A+K++ SSV A EV +L +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASES 667
H N+ L + ++ N L+ E G L D + ++ I +
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL--------FDEIILRQKFSEVDAAVIMKQV 130
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXX 724
G YLH K IVHRD+K N+LL K + K+ DFGLS F
Sbjct: 131 LSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + EK DV+S GV+L L+ G P
Sbjct: 188 Y---YIAPEV-LRKKYDEKCDVWSCGVILYILLCGYP 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 561 ITNNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQ--GYKQFQAEVELLIRAH 614
++ ++RV LG G +G V + + A+K++ +SV + EV +L
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLE----DKADTLCWERRLQIASESAQG 670
H N+ L + ++ N L+ E G L ++ ++ D I + G
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV------IIKQVLSG 148
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+ YLH K IVHRD+K N+LL K + K+ DFGLS +F
Sbjct: 149 VTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY-- 203
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + EK DV+S GV+L L+ G P
Sbjct: 204 -YIAPEV-LRKKYDEKCDVWSIGVILFILLAGYP 235
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 569 LGKGGFGTVYHGY--LDDKQ--VAVKMLSSSSVQG-YKQFQAEVELLIRAHHKNLTILVG 623
LG G FG+V G + KQ VA+K+L + + ++ E +++ + + + L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
C A M L+ E G L L+ K + + ++ + + G++YL + V
Sbjct: 404 VCQAEALM-LVMEMAGGGPLHKFLV-GKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX-XXXYLDPEYYISNRLTE 742
HR++ + N+LL + AK++DFGLS+ + PE + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 743 KSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARG 783
+SDV+S+GV + E ++ GQ P + + G V + + +G
Sbjct: 519 RSDVWSYGVTMWEALSYGQ-----KPYKKMKGPEVMAFIEQG 555
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 127
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 56 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 169
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 170 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 223
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 272
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 13/215 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ----VAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNLTI 620
R +G+G FG V+ G Y+ + VA+K + + ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
VHRD+ + N+L++ KL DFGLSR + ++ PE R
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 741 TEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
T SDV+ FGV + E L+ G Q +IG+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 36/222 (16%)
Query: 569 LGKGGFGTVYHGYLDDKQ---VAVKMLSSS---SVQGYKQFQAEVELLIRAHHKNLTILV 622
LGKG +G V+ +D + VAVK + + S + F+ + L + H+N+ L+
Sbjct: 17 LGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 623 GY--CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
D ++ L++++M +L A + +A+ L + + + + ++YLH+G
Sbjct: 76 NVLRADNDRDVYLVFDYMET-DLHAVI---RANILEPVHKQYVVYQLIKVIKYLHSGG-- 129
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX-------------------X 721
++HRD+K +NILLN + K+ADFGLSR F
Sbjct: 130 -LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 722 XXXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y PE + S + T+ D++S G +L E++ G+P+
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G +G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IGIT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 11 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 69
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 124
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 125 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 178
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 26/186 (13%)
Query: 585 KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL- 643
+QVAVKM+ Q + EV ++ H N+ + G + ++ EF+ G L
Sbjct: 71 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 644 ----QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ 699
Q L E++ T+C Q L YLH ++HRD+KS +ILL +
Sbjct: 131 DIVSQVRLNEEQIATVC--------EAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR 179
Query: 700 AKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLE 755
KL+DFG +S+ P ++ PE + + D++S G++++E
Sbjct: 180 VKLSDFGFCAQISKDVP------KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233
Query: 756 LITGQP 761
++ G+P
Sbjct: 234 MVDGEP 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 17 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 75
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 76 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 130
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 131 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 184
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 233
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 12 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 125
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 126 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 179
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 228
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 19 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 132
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 133 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 186
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 101
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 102 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 157
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 158 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 216 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 252
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 234
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 12 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 71 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 125
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 126 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 179
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 228
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 73
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 74 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 129
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 130 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 188 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 19 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 78 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 132
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 133 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 186
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ----VAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNLTI 620
R +G+G FG V+ G Y+ + VA+K + + ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
VHRD+ + N+L++ KL DFGLSR + ++ PE R
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 741 TEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
T SDV+ FGV + E L+ G Q +IG+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 561 ITNNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRA 613
+++ ++RV LG G +G V L + A+K++ SSV A EV +L +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASES 667
H N+ L + ++ N L+ E G L D + ++ I +
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGEL--------FDEIILRQKFSEVDAAVIMKQV 113
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXX 724
G YLH K IVHRD+K N+LL K + K+ DFGLS F
Sbjct: 114 LSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + EK DV+S GV+L L+ G P
Sbjct: 171 Y---YIAPEV-LRKKYDEKCDVWSCGVILYILLCGYP 203
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + D+ VA+K LS + K+ E+ L
Sbjct: 56 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVL 114
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYL 169
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 170 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 223
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF---PGRDYIDQW 272
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 79 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 134
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 135 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 193 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 47/219 (21%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEV---------ELLIRAHHK 616
+G G +G V +D + +VA+K L Y+ FQ+E+ LL H+
Sbjct: 33 VGSGAYGAVCSA-VDGRTGAKVAIKKL-------YRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 617 NLTILVGY------CDEGANMGLIYEFMAN--GNLQAH--LLEDKADTLCWERRLQIASE 666
N+ L+ D+ + L+ FM G L H L ED+ L ++
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ-------- 136
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
+GL Y+H I+HRD+K N+ +NE + K+ DFGL+R
Sbjct: 137 MLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVT 188
Query: 727 XXYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQ 764
Y PE ++ R T+ D++S G ++ E+ITG+ + +
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 70
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 71 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 126
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 127 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 185 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 26/186 (13%)
Query: 585 KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL- 643
KQVAVK + Q + EV ++ HH N+ + G + ++ EF+ G L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 644 ----QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ 699
+ E++ T+C + L YLHN ++HRD+KS +ILL +
Sbjct: 131 DIVTHTRMNEEQIATVCLS--------VLRALSYLHNQG---VIHRDIKSDSILLTSDGR 179
Query: 700 AKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLE 755
KL+DFG +S+ P ++ PE + D++S G++++E
Sbjct: 180 IKLSDFGFCAQVSKEVP------KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 756 LITGQP 761
+I G+P
Sbjct: 234 MIDGEP 239
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 76
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 77 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 132
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 133 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 191 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 24/236 (10%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAVK+ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 69
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L + + L+ E+ + G + +L+ W + + ++ Q + + +
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
IVHRD+K+ N+LL+ K+ADFG S F Y PE + +
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 740 LTE-KSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKNIV 789
+ DV+S GV+L L++G P +++ +R L G++ D +N++
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLL 237
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 75
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 76 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLES-- 131
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 132 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 190 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 226
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 13/215 (6%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQ----VAVKMLSSSSVQGYKQ-FQAEVELLIRAHHKNLTI 620
R +G+G FG V+ G Y+ + VA+K + + ++ F E + + H ++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
VHRD+ + N+L++ KL DFGLSR + ++ PE R
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 741 TEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
T SDV+ FGV + E L+ G Q +IG+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNL 618
+F VLG G F V +DK+ VA+K ++ +++G + + E+ +L + H N+
Sbjct: 21 DFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L + G ++ LI + ++ G L ++E T RL A ++YLH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHD-- 134
Query: 679 KPPIVHRDVKSANIL---LNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
IVHRD+K N+L L+E + ++DFGLS++ Y+ PE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
++ D +S GV+ L+ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNL 618
+F VLG G F V +DK+ VA+K ++ +++G + + E+ +L + H N+
Sbjct: 21 DFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L + G ++ LI + ++ G L ++E T RL + ++YLH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHD-- 134
Query: 679 KPPIVHRDVKSANIL---LNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
IVHRD+K N+L L+E + ++DFGLS++ Y+ PE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
++ D +S GV+ L+ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNL 618
+F VLG G F V +DK+ VA+K ++ +++G + + E+ +L + H N+
Sbjct: 21 DFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L + G ++ LI + ++ G L ++E T RL + ++YLH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHD-- 134
Query: 679 KPPIVHRDVKSANIL---LNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
IVHRD+K N+L L+E + ++DFGLS++ Y+ PE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
++ D +S GV+ L+ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNL 618
+F VLG G F V +DK+ VA+K ++ +++G + + E+ +L + H N+
Sbjct: 21 DFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L + G ++ LI + ++ G L ++E T RL + ++YLH+
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF--QVLDAVKYLHD-- 134
Query: 679 KPPIVHRDVKSANIL---LNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
IVHRD+K N+L L+E + ++DFGLS++ Y+ PE
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAPEVL 190
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
++ D +S GV+ L+ G P
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYP 216
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 565 FERVLGKGGFGTVYHGYLDDK----QVAVKMLSSSSVQ-GYKQFQAEVELLIRAHHKNLT 619
F+R LG G FG V+ ++++ + +K ++ Q +Q +AE+E+L H N+
Sbjct: 26 FKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKA--DTLCWERRLQIASESAQGLEYLHNG 677
+ ++ NM ++ E G L ++ +A L ++ + L Y H+
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS- 142
Query: 678 CKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+VH+D+K NIL + K+ DFGL+ +F Y+ PE
Sbjct: 143 --QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF---KSDEHSTNAAGTALYMAPEV 197
Query: 735 YISNRLTEKSDVYSFGVVLLELITG 759
+ + +T K D++S GVV+ L+TG
Sbjct: 198 FKRD-VTFKCDIWSAGVVMYFLLTG 221
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 567 RVLGKGGFGTVYH-GYLDDKQV-AVKMLSSSSV-QGYKQFQAEVELLIRAHHKNL--TIL 621
R LGKGGF Y +D K+V A K++ S + + +++ + E+ I HK+L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI---HKSLDNPHV 104
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
VG+ + +Y + ++ L L + + ++ QG++YLHN
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
++HRD+K N+ LN+ K+ DFGL+ Y+ PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 741 TEKSDVYSFGVVLLELITGQP 761
+ + D++S G +L L+ G+P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKP 240
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 9/198 (4%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ LG+G G V + ++ VAVK++ +V + + E+ + +H+N+ G
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ EG L E+ + G L + D +R + G+ YLH I
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHGIG---IT 126
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL-TE 742
HRD+K N+LL+E+ K++DFGL+ +F Y+ PE E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 743 KSDVYSFGVVLLELITGQ 760
DV+S G+VL ++ G+
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 453
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLES-- 509
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 510 -KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 567 RVLGKGGFGTVYH-GYLDDKQV-AVKMLSSSSV-QGYKQFQAEVELLIRAHHKNL--TIL 621
R LGKGGF Y +D K+V A K++ S + + +++ + E+ I HK+L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI---HKSLDNPHV 104
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
VG+ + +Y + ++ L L + + ++ QG++YLHN
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
++HRD+K N+ LN+ K+ DFGL+ Y+ PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 741 TEKSDVYSFGVVLLELITGQP 761
+ + D++S G +L L+ G+P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKP 240
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 80 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 134
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S GV++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 547 ELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQ 604
E E+ F +F++L R +GKG FG V +D K A+K ++ + +
Sbjct: 8 ENEDVNFDHFEIL-------RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 605 ---AEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLED---KADTLCWE 658
E++++ H L L + +M ++ + + G+L+ HL ++ K +T+
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV--- 117
Query: 659 RRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXX 718
+L I E L+YL N I+HRD+K NILL+E + DF ++ + P
Sbjct: 118 -KLFIC-ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RET 169
Query: 719 XXXXXXXXXXYLDPEYYISNRLTEKS---DVYSFGVVLLELITGQ 760
Y+ PE + S + S D +S GV EL+ G+
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 567 RVLGKGGFGTVYH-GYLDDKQV-AVKMLSSSSV-QGYKQFQAEVELLIRAHHKNL--TIL 621
R LGKGGF Y +D K+V A K++ S + + +++ + E+ I HK+L +
Sbjct: 48 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI---HKSLDNPHV 104
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
VG+ + +Y + ++ L L + + ++ QG++YLHN
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 161
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
++HRD+K N+ LN+ K+ DFGL+ Y+ PE
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 741 TEKSDVYSFGVVLLELITGQPVIQKT 766
+ + D++S G +L L+ G+P + +
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 567 RVLGKGGFGTVYHG-YLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHKNL 618
R +G+G FG V+ G Y+ + A+ K +S SV+ ++F E + + H ++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQFDHPHI 453
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
L+G E + +I E G L++ L+ + +L + A + + L YL +
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRS-FLQVRKFSLDLASLILYAYQLSTALAYLES-- 509
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
VHRD+ + N+L++ KL DFGLSR + ++ PE
Sbjct: 510 -KRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 739 RLTEKSDVYSFGVVLLE-LITGQPVIQKTPQRTLIGQ 774
R T SDV+ FGV + E L+ G Q +IG+
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 604
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 41/229 (17%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVY-----HGYLDDKQVAVKMLSSSSV----------- 597
SYF V R LG G +G V +G+ + A+K++ S
Sbjct: 37 SYFKV--------RKLGSGAYGEVLLCKEKNGH---SEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 598 --QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTL 655
+ +++ E+ LL H N+ L ++ L+ EF G L ++
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 656 CWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK---FQAKLADFGLSRIFP 712
C I + G+ YLH K IVHRD+K NILL K K+ DFGLS F
Sbjct: 146 C--DAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + EK DV+S GV++ L+ G P
Sbjct: 201 ---KDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYP 245
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------------QGYKQFQAEVELLIR 612
RVLG+GGFG V+ A +M ++ + +GY+ E ++L +
Sbjct: 191 RVLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWE--RRLQIASESAQG 670
H + + L + ++ L+ M G+++ H+ D ++ R + ++ G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
LE+LH + I++RD+K N+LL++ +++D GL+ ++
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE + D ++ GV L E+I +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAVK+ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ------GLEY 673
L + + L+ E+ + G + D L R++ A+ ++Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEV--------FDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H IVHRD+K+ N+LL+ K+ADFG S F Y PE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGSPPYAAPE 182
Query: 734 YYISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKN 787
+ + + DV+S GV+L L++G P +++ +R L G++ D +N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 788 IV 789
++
Sbjct: 243 LL 244
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------------QGYKQFQAEVELLIR 612
RVLG+GGFG V+ A +M ++ + +GY+ E ++L +
Sbjct: 191 RVLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWE--RRLQIASESAQG 670
H + + L + ++ L+ M G+++ H+ D ++ R + ++ G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
LE+LH + I++RD+K N+LL++ +++D GL+ ++
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE + D ++ GV L E+I +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAVK+ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ------GLEY 673
L + + L+ E+ + G + D L R++ A+ ++Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEV--------FDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H IVHRD+K+ N+LL+ K+ADFG S F Y PE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGSPPYAAPE 182
Query: 734 YYISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKN 787
+ + + DV+S GV+L L++G P +++ +R L G++ D +N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 788 IV 789
++
Sbjct: 243 LL 244
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------------QGYKQFQAEVELLIR 612
RVLG+GGFG V+ A +M ++ + +GY+ E ++L +
Sbjct: 191 RVLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWE--RRLQIASESAQG 670
H + + L + ++ L+ M G+++ H+ D ++ R + ++ G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
LE+LH + I++RD+K N+LL++ +++D GL+ ++
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE + D ++ GV L E+I +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------------QGYKQFQAEVELLIR 612
RVLG+GGFG V+ A +M ++ + +GY+ E ++L +
Sbjct: 191 RVLGRGGFGEVF---------ACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWE--RRLQIASESAQG 670
H + + L + ++ L+ M G+++ H+ D ++ R + ++ G
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 671 LEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
LE+LH + I++RD+K N+LL++ +++D GL+ ++
Sbjct: 302 LEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFM 356
Query: 731 DPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE + D ++ GV L E+I +
Sbjct: 357 APELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAVK+ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ------GLEY 673
L + + L+ E+ + G + D L R++ A+ ++Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEV--------FDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H IVHRD+K+ N+LL+ K+ADFG S F Y PE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDAFCGAPPYAAPE 182
Query: 734 YYISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKN 787
+ + + DV+S GV+L L++G P +++ +R L G++ D +N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 788 IV 789
++
Sbjct: 243 LL 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 76 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 190
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 567 RVLGKGGFGTVYH-GYLDDKQV-AVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLT--IL 621
R LGKGGF Y +D K+V A K++ S + + +++ + E+ I HK+L +
Sbjct: 32 RFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI---HKSLDNPHV 88
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHL-LEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
VG+ + +Y + ++ L L + + ++ QG++YLHN
Sbjct: 89 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN--- 145
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
++HRD+K N+ LN+ K+ DFGL+ Y+ PE
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 741 TEKSDVYSFGVVLLELITGQP 761
+ + D++S G +L L+ G+P
Sbjct: 204 SFEVDIWSLGCILYTLLVGKP 224
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQVAV-------KMLSSSSVQGYKQFQAEVELLIRAHHK 616
F+ +G+G F TVY G + V V + L+ S Q +F+ E E L H
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHP 85
Query: 617 NLTILVGYCDEGAN----MGLIYEFMANGNLQAHLLEDKADTL----CWERRLQIASESA 668
N+ + + L+ E +G L+ +L K + W R++
Sbjct: 86 NIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------L 139
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
+GL++LH PPI+HRD+K NI + K+ D GL+ +
Sbjct: 140 KGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTP 194
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
+ PE Y + E DVY+FG LE T +
Sbjct: 195 EFXAPEXY-EEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 86 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 140
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT 200
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 76 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEV-------ELLIRAH--HK 616
+G G +G+V +D + +VA+K LS + FQ+E+ ELL+ H H+
Sbjct: 50 VGSGAYGSVCSA-IDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 617 NLTILVGYCDEGANMGLIYEF-MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L+ +++ Y+F + +Q L + E+ + + +GL+Y+H
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +VHRD+K N+ +NE + K+ DFGL+R Y PE
Sbjct: 162 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVI 213
Query: 736 IS-NRLTEKSDVYSFGVVLLELITGQPVIQ 764
+S + D++S G ++ E++TG+ + +
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEV-------ELLIRAH--HK 616
+G G +G+V +D + +VA+K LS + FQ+E+ ELL+ H H+
Sbjct: 32 VGSGAYGSVCSA-IDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 617 NLTILVGYCDEGANMGLIYEF-MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
N+ L+ +++ Y+F + +Q L + E+ + + +GL+Y+H
Sbjct: 84 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +VHRD+K N+ +NE + K+ DFGL+R Y PE
Sbjct: 144 SAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----HADAEMTGYVVTRWYRAPEVI 195
Query: 736 IS-NRLTEKSDVYSFGVVLLELITGQPVIQ 764
+S + D++S G ++ E++TG+ + +
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 76 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 131 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 190
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 191 FSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 86 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 140
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 141 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 200
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 201 FSHASDTWMFGVTLWEMFT 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S GV++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 80/199 (40%), Gaps = 14/199 (7%)
Query: 569 LGKGGFGTVYHGYLDDKQ-----VAVKMLSS---SSVQGYKQFQAEVELLIRAHHKNLTI 620
LG G FG V G D VAVK L S + F EV + H+NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
L G M ++ E G+L L + + L + A + A+G+ YL +
Sbjct: 80 LYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGYLES---K 134
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX-XXYLDPEYYISNR 739
+HRD+ + N+LL + K+ DFGL R P + PE +
Sbjct: 135 RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT 194
Query: 740 LTEKSDVYSFGVVLLELIT 758
+ SD + FGV L E+ T
Sbjct: 195 FSHASDTWMFGVTLWEMFT 213
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAV++ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ------GLEY 673
L + + L+ E+ + G + D L R++ A+ ++Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEV--------FDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H IVHRD+K+ N+LL+ K+ADFG S F Y PE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDTFCGSPPYAAPE 182
Query: 734 YYISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKN 787
+ + + DV+S GV+L L++G P +++ +R L G++ D +N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 788 IV 789
++
Sbjct: 243 LL 244
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FER+ LG G G V V+ S + K E++ IR
Sbjct: 16 DDFERISELGAGNGGVV---------TKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ 66
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L E A + E +++
Sbjct: 67 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVL 124
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 125 RGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 178
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+EL G+
Sbjct: 179 YMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPE 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF---PGRDYIDQW 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 18/241 (7%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQV--AVKMLSSSSV---QGYKQFQAEVELLIR-AHHKN 617
+F +V+GKG FG V ++V AVK+L ++ + K +E +L++ H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCW-ERRLQI-ASESAQGLEYLH 675
L L + + +++ G L HL ++ C+ E R + A+E A L YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLH 156
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ IV+RD+K NILL+ + L DFGL + YL PE
Sbjct: 157 SLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLA-RGDIKNIVDHRLQ 794
D + G VL E++ G P + ++ L + +I N H L+
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLE 271
Query: 795 G 795
G
Sbjct: 272 G 272
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Query: 569 LGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQG---YKQFQAEVELLIRAHHKNLTILVG 623
LG+G FG V Y ++VA+K +S ++ + + + E+ L H ++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
++ ++ E+ A G L +++E K T RR + +EY H + IV
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCH---RHKIV 130
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE- 742
HRD+K N+LL++ K+ADFGLS I Y PE I+ +L
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIM---TDGNFLKTSCGSPNYAAPE-VINGKLYAG 186
Query: 743 -KSDVYSFGVVLLELITGQ 760
+ DV+S G+VL ++ G+
Sbjct: 187 PEVDVWSCGIVLYVMLVGR 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 36/242 (14%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAV++ L+SSS+Q K F+ EV ++ +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ--KLFR-EVRIMKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ------GLEY 673
L + + L+ E+ + G + D L R++ A+ ++Y
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEV--------FDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H IVHRD+K+ N+LL+ K+ADFG S F Y PE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF---TFGNKLDEFCGSPPYAAPE 182
Query: 734 YYISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKN 787
+ + + DV+S GV+L L++G P +++ +R L G++ D +N
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCEN 242
Query: 788 IV 789
++
Sbjct: 243 LL 244
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 653 DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712
D L E + + + A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL- 771
++ PE T +SDV+SFGV+L E+ + + +P +
Sbjct: 250 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 305
Query: 772 IGQWVSSMLARGDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL 830
I + L G R++ D+ T +++ + L C H ++RPT +++V L
Sbjct: 306 IDEEFCRRLKEGT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
Query: 831 NDCL 834
+ L
Sbjct: 356 GNLL 359
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 32/240 (13%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ +GKG F V L K+VAVK+ L+SSS+Q K F+ EV + +H N+
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ--KLFR-EVRIXKVLNHPNIV 76
Query: 620 ILVGYCDEGANMGLIYEFMANGN----LQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L + + L+ E+ + G L AH + + R QI S ++Y H
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR--QIVS----AVQYCH 130
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
IVHRD+K+ N+LL+ K+ADFG S F Y PE +
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF---TFGNKLDAFCGAPPYAAPELF 184
Query: 736 ISNRLT-EKSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKNIV 789
+ + DV+S GV+L L++G P +++ +R L G++ D +N++
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLL 244
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 569 LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGY 624
+G+G FG V+ H K K+L + +G+ E+++L H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 625 CDEGAN--------MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
C A+ + L+++F + A LL + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD--LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH- 142
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX--YLDPEY 734
+ I+HRD+K+AN+L+ KLADFGL+R F Y PE
Sbjct: 143 --RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 735 YISNR-LTEKSDVYSFGVVLLELITGQPVIQ---KTPQRTLIGQWVSSM 779
+ R D++ G ++ E+ T P++Q + Q LI Q S+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPE 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 653 DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712
D L E + + + A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL- 771
++ PE T +SDV+SFGV+L E+ + + +P +
Sbjct: 252 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 307
Query: 772 IGQWVSSMLARGDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL 830
I + L G R++ D+ T +++ + L C H ++RPT +++V L
Sbjct: 308 IDEEFCRRLKEGT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
Query: 831 NDCL 834
+ L
Sbjct: 358 GNLL 361
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 653 DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712
D L E + + + A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL- 771
++ PE T +SDV+SFGV+L E+ + + +P +
Sbjct: 243 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 298
Query: 772 IGQWVSSMLARGDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL 830
I + L G R++ D+ T +++ + L C H ++RPT +++V L
Sbjct: 299 IDEEFCRRLKEGT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
Query: 831 NDCL 834
+ L
Sbjct: 349 GNLL 352
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 569 LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGY 624
+G+G FG V+ H K K+L + +G+ E+++L H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 625 CDEGAN--------MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
C A+ + L+++F + A LL + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHD--LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH- 142
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXX--XXXXXXXXXXYLDPEY 734
+ I+HRD+K+AN+L+ KLADFGL+R F Y PE
Sbjct: 143 --RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 735 YISNR-LTEKSDVYSFGVVLLELITGQPVIQ---KTPQRTLIGQWVSSM 779
+ R D++ G ++ E+ T P++Q + Q LI Q S+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 19/184 (10%)
Query: 653 DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712
D L E + + + A+G+E+L + +HRD+ + NILL+EK K+ DFGL+R
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
Query: 713 XXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL- 771
++ PE T +SDV+SFGV+L E+ + + +P +
Sbjct: 245 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVK 300
Query: 772 IGQWVSSMLARGDIKNIVDHRLQG-DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIEL 830
I + L G R++ D+ T +++ + L C H ++RPT +++V L
Sbjct: 301 IDEEFCRRLKEGT-------RMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
Query: 831 NDCL 834
+ L
Sbjct: 351 GNLL 354
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 569 LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGY 624
+G+G FG V+ H K K+L + +G+ E+++L H+N+ L+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 625 CDEGAN--------MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
C A+ + L+++F + A LL + ++ GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHD--LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH- 141
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXX--XXXXXXXXXXYLDPEY 734
+ I+HRD+K+AN+L+ KLADFGL+R F Y PE
Sbjct: 142 --RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 199
Query: 735 YISNR-LTEKSDVYSFGVVLLELITGQPVIQ---KTPQRTLIGQWVSSM 779
+ R D++ G ++ E+ T P++Q + Q LI Q S+
Sbjct: 200 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 68 DDFEKISELGAGNGGVVFK---------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 118
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 176
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 177 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 230
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 6 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 114
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 569 LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYK-QFQAEVELLIRAHHKNLTILVGY 624
+G+G FG V+ H K K+L + +G+ E+++L H+N+ L+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 625 CDEGAN--------MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
C A+ + L+++F + A LL + ++ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHD--LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH- 142
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXX--XXXXXXXXXXYLDPEY 734
+ I+HRD+K+AN+L+ KLADFGL+R F Y PE
Sbjct: 143 --RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 735 YISNR-LTEKSDVYSFGVVLLELITGQPVIQ---KTPQRTLIGQWVSSM 779
+ R D++ G ++ E+ T P++Q + Q LI Q S+
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPE 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYIDQW 234
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 12 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 70
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 125
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 126 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 179
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYIDQW 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 23 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 81
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 136
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 137 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 190
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E++ + + P R I QW
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF---PGRDYIDQW 239
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 6 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 114
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 20 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 78
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 133
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 134 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPF 187
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 236
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 19 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 77
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYL 132
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 133 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 186
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 235
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 6 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 114
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 569 LGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYK---QFQAEVELLIRAHHKNLTILVG 623
LG G FG V G L +VAVK+L+ ++ + + E++ L H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL--QIASESAQGLEYLHNGCKPP 681
+ ++ E+++ G L ++ + RRL QI S ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS----AVDYCH---RHM 131
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+VHRD+K N+LL+ AK+ADFGLS + Y PE IS RL
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRTSCGSPNYAAPE-VISGRLY 187
Query: 742 E--KSDVYSFGVVLLELITG 759
+ D++S GV+L L+ G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 118
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 173
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 550 NRKFSYFDVLKITN-NFERVLGKGGFGTVYHGY--LDDKQVAVKM-----LSSSSVQGYK 601
N K S D I N + LG+G FG V Y ++VA+K+ L+ S +QG
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 58
Query: 602 QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
+ + E+ L H ++ L + ++ E+ N + DK R
Sbjct: 59 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFF 118
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
Q + +EY H + IVHRD+K N+LL+E K+ADFGLS I
Sbjct: 119 Q---QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLK 169
Query: 722 XXXXXXXYLDPEYYISNRLTE--KSDVYSFGVVL 753
Y PE IS +L + DV+S GV+L
Sbjct: 170 TSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHHKNLTIL 621
R LG G FG V+ + + A+K+L V KQ + E +L H + +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
G + + +I +++ G L + L K+ A+E LEYLH+
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCLALEYLHSK---D 126
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
I++RD+K NILL++ K+ DFG ++ P Y+ PE +
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIAPEVVSTKPYN 181
Query: 742 EKSDVYSFGVVLLELITG 759
+ D +SFG+++ E++ G
Sbjct: 182 KSIDWWSFGILIYEMLAG 199
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGXVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 560 KITNNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRA 613
+ NF++V +G+G +G VY L + VA+K + + +G E+ LL
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
+H N+ L+ + L++EF+ + +L+ + + + QGL +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 180
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 181 ILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK + +G G G V + + VAVK LS + K+ E+ L
Sbjct: 16 STFTVLKRYQQL-KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 74
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
L +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 75 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYL 129
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 130 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPY 183
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ EL+ G + Q T I QW
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH---IDQW 232
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 6 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 114
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 6 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 56
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 114
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 168
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMA---NGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
N+ L+ + L++EF++ + A L L Q+ QGL +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 121
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 122 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 35 IGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 90
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 91 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 150 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 26 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 81
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 82 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 550 NRKFSYFDVLKITN-NFERVLGKGGFGTVYHGY--LDDKQVAVKM-----LSSSSVQGYK 601
N K S D I N + LG+G FG V Y ++VA+K+ L+ S +QG
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 59
Query: 602 QFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL 661
+ + E+ L H ++ L + ++ E+ N + DK R
Sbjct: 60 RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFF 119
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
Q + +EY H + IVHRD+K N+LL+E K+ADFGLS I
Sbjct: 120 Q---QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLK 170
Query: 722 XXXXXXXYLDPEYYISNRLTE--KSDVYSFGVVL 753
Y PE IS +L + DV+S GV+L
Sbjct: 171 TSCGSPNYAAPE-VISGKLYAGPEVDVWSCGVIL 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ LG+G FG V Y ++VA+K+ L+ S +QG + + E+ L H ++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 71
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L + ++ E+ N + DK R Q + +EY H +
Sbjct: 72 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCH---R 125
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
IVHRD+K N+LL+E K+ADFGLS I Y PE IS +
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPNYAAPE-VISGK 181
Query: 740 LTE--KSDVYSFGVVL 753
L + DV+S GV+L
Sbjct: 182 LYAGPEVDVWSCGVIL 197
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 121
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 122 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 176
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 118
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLA 173
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMA---NGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
N+ L+ + L++EF++ + A L L Q+ QGL +
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAF 121
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 122 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 176
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 37 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 92
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 93 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 27 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 82
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 83 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 142 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M Q +E L ER +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 617 NLTILVGYCDEGANMGLIYEFMA---NGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
N+ L+ + L++EF++ + A L L Q+ QGL +
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAF 120
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 121 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 175
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 27 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 82
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 83 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 141
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 142 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 193
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 37 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 92
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 93 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 617 NLTILVGYCDEGANMGLIYEFMA---NGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
N+ L+ + L++EF++ + A L L Q+ QGL +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 119
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 120 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 174
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 35 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 90
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 91 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 150 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 37 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 92
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 93 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTADEMTGYVATRWYRAPEIMLN 203
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 568 VLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
++G GGFG V+ +D K +K + ++ + + EV+ L + H N+ G C
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVHYNG-C 72
Query: 626 DEGAN-----------------MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
+G + + + EF G L+ + + + + L L++ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+G++Y+H+ +++RD+K +NI L + Q K+ DFGL
Sbjct: 133 KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGL---VTSLKNDGKRXRSKGTLR 186
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELI 757
Y+ PE S ++ D+Y+ G++L EL+
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 21/196 (10%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKM-----LSSSSVQGYKQFQAEVELLIRAHHKNLT 619
+ LG+G FG V Y ++VA+K+ L+ S +QG + + E+ L H ++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHPHII 67
Query: 620 ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
L + ++ E+ N + DK R Q + +EY H +
Sbjct: 68 KLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCH---R 121
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
IVHRD+K N+LL+E K+ADFGLS I Y PE IS +
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPNYAAPE-VISGK 177
Query: 740 LTE--KSDVYSFGVVL 753
L + DV+S GV+L
Sbjct: 178 LYAGPEVDVWSCGVIL 193
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 40/244 (16%)
Query: 540 GKKKGSLELENRKFSYFDVLKIT---------NNFERV--LGKGGFGTVYHGYLDDKQVA 588
GKK LEL+ ++ + ++FE++ LG G G V+
Sbjct: 1 GKKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVF---------K 51
Query: 589 VKMLSSSSVQGYKQFQAEVELLIR---------AHHKNLTILVGYCD---EGANMGLIYE 636
V S V K E++ IR H N +VG+ + + E
Sbjct: 52 VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111
Query: 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696
M G+L L KA + + +++ +GL YL K I+HRDVK +NIL+N
Sbjct: 112 HMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNS 167
Query: 697 KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLEL 756
+ + KL DFG+S Y+ PE + +SD++S G+ L+E+
Sbjct: 168 RGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
Query: 757 ITGQ 760
G+
Sbjct: 224 AVGR 227
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 569 LGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYK---QFQAEVELLIRAHHKNLTILVG 623
LG G FG V G L +VAVK+L+ ++ + + E++ L H ++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL--QIASESAQGLEYLHNGCKPP 681
+ ++ E+++ G L ++ + RRL QI S ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS----AVDYCH---RHM 131
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+VHRD+K N+LL+ AK+ADFGLS + Y PE IS RL
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM---SDGEFLRDSCGSPNYAAPE-VISGRLY 187
Query: 742 E--KSDVYSFGVVLLELITG 759
+ D++S GV+L L+ G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 35 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 90
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 91 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 150 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI- 736
I+HRD+K +N+ +NE + K+ DFGL+R Y PE +
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ + D++S G ++ EL+TG+ + T
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 28 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 83
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 84 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 142
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 143 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 194
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDSELKILDFGLCR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 605 AEVELLIRAHHKNLTILVGYCDE-----GANMGLIYEFMANGNLQAHLLEDKADT--LCW 657
+EV LL H N+ V Y D + ++ E+ G+L + + + + L
Sbjct: 54 SEVNLLRELKHPNI---VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 658 ERRLQIASESAQGLEYLHNGCKP--PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXX 715
E L++ ++ L+ H ++HRD+K AN+ L+ K KL DFGL+RI
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NH 168
Query: 716 XXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
Y+ PE EKSD++S G +L EL P Q+ L G+
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 54/245 (22%)
Query: 548 LENRKFSYF--------DVLKITNNF--ERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS 595
+E+ KF+ F ++ N+F R++G+GGFG VY D K A+K L
Sbjct: 166 IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 596 SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA---------------NMGLIYEFMAN 640
+ K Q E L N I++ G + I + M
Sbjct: 226 RI---KMKQGETLAL------NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 641 GNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696
G+L HL + +AD + A+E GLE++HN +V+RD+K ANILL+E
Sbjct: 277 GDLHYHLSQHGVFSEADMRFY------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 697 KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLE 755
+++D GL+ F Y+ PE + S D +S G +L +
Sbjct: 328 HGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 756 LITGQ 760
L+ G
Sbjct: 384 LLRGH 388
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 560 KITNNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRA 613
+ NF++V +G+G +G VY L + VA+K + + +G E+ LL
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
+H N+ L+ + L++EF+ + +L+ + + + QGL +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPE 180
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 181 ILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 9 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 59
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 117
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 118 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRS 171
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 54/245 (22%)
Query: 548 LENRKFSYF--------DVLKITNNF--ERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS 595
+E+ KF+ F ++ N+F R++G+GGFG VY D K A+K L
Sbjct: 165 IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 224
Query: 596 SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA---------------NMGLIYEFMAN 640
+ K Q E L N I++ G + I + M
Sbjct: 225 RI---KMKQGETLAL------NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 275
Query: 641 GNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696
G+L HL + +AD + A+E GLE++HN +V+RD+K ANILL+E
Sbjct: 276 GDLHYHLSQHGVFSEADMRFY------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 326
Query: 697 KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLE 755
+++D GL+ F Y+ PE + S D +S G +L +
Sbjct: 327 HGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 382
Query: 756 LITGQ 760
L+ G
Sbjct: 383 LLRGH 387
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQ--GYKQFQAEVELLIRAHHKNLTILV 622
+ +GKG F V L ++VA+K++ + + ++ EV ++ +H N+ L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ + LI E+ + G + +L+ + + QI S ++Y H +
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS----AVQYCH---QK 133
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
IVHRD+K+ N+LL+ K+ADFG S F Y PE + +
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDAFCGAPPYAAPELFQGKKY 190
Query: 741 TE-KSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793
+ DV+S GV+L L++G P +++ +R L G++ D +N++ L
Sbjct: 191 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 249
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 118
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 26 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 81
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 82 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 37 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 92
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 93 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 203
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M + NL + +++ + D ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDH---ERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK N + +G G G V Y + ++ VA+K LS + K+ E+ L
Sbjct: 18 STFTVLKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
+ +HKN+ L+ +E ++ ++ E M + NL + +++ + D ER +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-SQVIQMELDH---ERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + E D++S G ++ E+I G + P I QW
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF---PGTDHIDQW 234
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 54/245 (22%)
Query: 548 LENRKFSYF--------DVLKITNNF--ERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS 595
+E+ KF+ F ++ N+F R++G+GGFG VY D K A+K L
Sbjct: 166 IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 596 SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA---------------NMGLIYEFMAN 640
+ K Q E L N I++ G + I + M
Sbjct: 226 RI---KMKQGETLAL------NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 641 GNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696
G+L HL + +AD + A+E GLE++HN +V+RD+K ANILL+E
Sbjct: 277 GDLHYHLSQHGVFSEADMRFY------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 697 KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLE 755
+++D GL+ F Y+ PE + S D +S G +L +
Sbjct: 328 HGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 756 LITGQ 760
L+ G
Sbjct: 384 LLRGH 388
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 54/245 (22%)
Query: 548 LENRKFSYF--------DVLKITNNF--ERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS 595
+E+ KF+ F ++ N+F R++G+GGFG VY D K A+K L
Sbjct: 166 IESDKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK 225
Query: 596 SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA---------------NMGLIYEFMAN 640
+ K Q E L N I++ G + I + M
Sbjct: 226 RI---KMKQGETLAL------NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 641 GNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696
G+L HL + +AD + A+E GLE++HN +V+RD+K ANILL+E
Sbjct: 277 GDLHYHLSQHGVFSEADMRFY------AAEIILGLEHMHNRF---VVYRDLKPANILLDE 327
Query: 697 KFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKS-DVYSFGVVLLE 755
+++D GL+ F Y+ PE + S D +S G +L +
Sbjct: 328 HGHVRISDLGLACDF----SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383
Query: 756 LITGQ 760
L+ G
Sbjct: 384 LLRGH 388
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 26 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 81
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 82 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 192
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 605 AEVELLIRAHHKNLTILVGYCDE-----GANMGLIYEFMANGNLQAHLLEDKADT--LCW 657
+EV LL H N+ V Y D + ++ E+ G+L + + + + L
Sbjct: 54 SEVNLLRELKHPNI---VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 658 ERRLQIASESAQGLEYLHNGCKP--PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXX 715
E L++ ++ L+ H ++HRD+K AN+ L+ K KL DFGL+RI
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NH 168
Query: 716 XXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
Y+ PE EKSD++S G +L EL P Q+ L G+
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 118
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 35 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 90
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 91 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 149
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 150 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 201
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 42 VGSGAYGSVCAAF-DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV---IG 97
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 98 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 29 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 84
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 85 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 143
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 144 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 195
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 123
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 124 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 178
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 565 FERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQ--GYKQFQAEVELLIRAHHKNLTI 620
++ +GKG F V L ++VAVK++ + + ++ EV ++ +H N+
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIA-SESAQGLEYLHNGCK 679
L + + L+ E+ + G + +L+ A E+ + + ++Y H +
Sbjct: 79 LFEVIETEKTLYLVMEYASGGEVFDYLV---AHGRMKEKEARAKFRQIVSAVQYCH---Q 132
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
IVHRD+K+ N+LL+ K+ADFG S F Y PE + +
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEF---TVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 740 LT-EKSDVYSFGVVLLELITG 759
+ DV+S GV+L L++G
Sbjct: 190 YDGPEVDVWSLGVILYTLVSG 210
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 178
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 32 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 87
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 88 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 32 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 87
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 88 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 41 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 96
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 97 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 156 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMAGFVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 180
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 124 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 178
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 42 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 97
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 98 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 42 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 97
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 98 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 156
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 208
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 560 KIT-NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLI 611
K+T N+F+ ++LGKG FG V + A+K+L + + E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 612 RAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGL 671
H LT L + + E+ G L HL ++ T ER +E L
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSAL 118
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLD 731
EYLH+ +V+RD+K N++L++ K+ DFGL + YL
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLA 173
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQ 760
PE N D + GVV+ E++ G+
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 53 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 108
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 109 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 167
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 168 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 219
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 36 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 91
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 92 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 32 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 87
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 88 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 179
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 40 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 95
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 96 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 154
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 155 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 206
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 179
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 124 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 178
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 32 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 87
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 88 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 146
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 147 ---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 198
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 177
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 106/239 (44%), Gaps = 22/239 (9%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQ--GYKQFQAEVELLIRAHHKNLTILV 622
+ +GKG F V L ++VA+K++ + + ++ EV ++ +H N+ L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ + LI E+ + G + +L+ + + QI S ++Y H +
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS----AVQYCH---QK 130
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
IVHRD+K+ N+LL+ K+ADFG S F Y PE + +
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEF---TVGGKLDTFCGSPPYAAPELFQGKKY 187
Query: 741 TE-KSDVYSFGVVLLELITGQ-PV----IQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793
+ DV+S GV+L L++G P +++ +R L G++ D +N++ L
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFL 246
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 49 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 104
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 105 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 164 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 26/248 (10%)
Query: 531 QNLRRRKQAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDK---QV 587
+NL + A +++ + + + ++V + N V G G +G+V + D K +V
Sbjct: 16 ENLYFQSNASQERPTFYRQELNKTIWEVPERYQNLSPV-GSGAYGSVCAAF-DTKTGLRV 73
Query: 588 AVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQA 645
AVK LS S+ K+ E+ LL H+N+ +G D + EF + L
Sbjct: 74 AVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IGLLDVFTPARSLEEF-NDVYLVT 129
Query: 646 HLLEDKADTLCWERRLQ------IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ 699
HL+ + + ++L + + +GL+Y+H+ I+HRD+K +N+ +NE +
Sbjct: 130 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 186
Query: 700 AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS-NRLTEKSDVYSFGVVLLELIT 758
K+ DFGL+R Y PE ++ + D++S G ++ EL+T
Sbjct: 187 LKILDFGLAR-----HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 759 GQPVIQKT 766
G+ + T
Sbjct: 242 GRTLFPGT 249
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 50 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 105
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 106 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 41 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 96
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 97 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 155
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 156 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 207
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 49 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 104
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 105 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 163
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 164 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 215
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 123 HR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 177
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 50 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 105
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 106 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 216
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 180
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 50 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 105
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 106 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 164
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMXGXVATRWYRAPEIMLN 216
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 177
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 179
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 36 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 91
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 92 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 151 ---DIIHRDLKPSNLAVNEDSELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 26 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 81
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + +L + + +GL+Y+H+
Sbjct: 82 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA 140
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 192
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 36 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 91
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 92 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 563 NNFERV--LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-------- 612
++FE++ LG G G V+ V S V K E++ IR
Sbjct: 25 DDFEKISELGAGNGGVVF---------KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ 75
Query: 613 -AHHKNLTILVGYCD---EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA 668
H N +VG+ + + E M G+L L KA + + +++
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVI 133
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+GL YL K I+HRDVK +NIL+N + + KL DFG+S
Sbjct: 134 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRS 187
Query: 729 YLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE + +SD++S G+ L+E+ G+
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 556 FDVLKITN-NFERVLGKGGFGTVYHGYLDDKQ-----VAVKMLSSSSV---QGYKQFQAE 606
D +K+T+ NF VLGKG FG V L D++ A+K+L V + E
Sbjct: 13 LDRVKLTDFNFLMVLGKGSFGKVM---LADRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 607 VELLIRAHHKNLTILVGYCDEGAN-MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS 665
+L + C + + + + E++ G+L H+ + + + A+
Sbjct: 70 KRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAA 127
Query: 666 ESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
E + GL +LH K I++RD+K N++L+ + K+ADFG+ +
Sbjct: 128 EISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCG 182
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + D +++GV+L E++ GQP
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 123 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 177
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 36 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 91
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 92 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 150
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 202
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 605 AEVELLIRAHHKNLTILVGYCDE-----GANMGLIYEFMANGNLQAHLLEDKADT--LCW 657
+EV LL H N+ V Y D + ++ E+ G+L + + + + L
Sbjct: 54 SEVNLLRELKHPNI---VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 658 ERRLQIASESAQGLEYLHNGCKP--PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXX 715
E L++ ++ L+ H ++HRD+K AN+ L+ K KL DFGL+RI
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NH 168
Query: 716 XXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
Y+ PE EKSD++S G +L EL P Q+ L G+
Sbjct: 169 DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 563 NNFE--RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVE----LLIRAH 614
+NFE RVLGKG FG V + + AVK+L + + + L + +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H LT L + + EF+ G+L H+ K+ R A+E L +L
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALMFL 140
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ I++RD+K N+LL+ + KLADFG+ + Y+ PE
Sbjct: 141 HD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEI 195
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQ 760
D ++ GV+L E++ G
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 19/169 (11%)
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXX 727
A+G+E+L + +HRD+ + NILL+E K+ DFGL+R
Sbjct: 209 ARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 728 XYLDPEYYISNRLTEKSDVYSFGVVLLELIT--GQPVIQKTPQRTLIGQWVSSMLARGDI 785
++ PE + KSDV+S+GV+L E+ + G P + M R
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAP- 324
Query: 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834
++ T ++ +I L C H RP ++V +L D L
Sbjct: 325 ----------EYSTPEIY---QIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFM---ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
N+ L+ + L++EF+ + A L L Q+ QGL +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 674 LHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
H+ ++HRD+K N+L+N + KLADFGL+R F Y PE
Sbjct: 119 CHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPE 173
Query: 734 YYISNRLTEKS-DVYSFGVVLLELIT 758
+ + + D++S G + E++T
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V Y D K ++AVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 59 VGSGAYGSVCSSY-DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 114
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 115 LLDVFTPATSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 173
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DFGL+R Y PE ++
Sbjct: 174 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 225
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
D++S G ++ EL+TG+ + T
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 565 FERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F VLG G F V+ L K A+K + S + E+ +L + H+N+ L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA-QGLEYLH-NGCKP 680
+ + L+ + ++ G L +LE T E+ + + ++YLH NG
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYT---EKDASLVIQQVLSAVKYLHENG--- 126
Query: 681 PIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
IVHRD+K N+L E + + DFGLS++ Y+ PE
Sbjct: 127 -IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 738 NRLTEKSDVYSFGVVLLELITGQP 761
++ D +S GV+ L+ G P
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYP 205
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAV-KMLSSSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+ K+ + +G E+ LL +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 176
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAV-KMLSSSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+ K+ + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++EF+ + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ D+GL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDYGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 569 LGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYKQFQAEVELLIRAH-----HKNLT 619
+G+G +G V+ D K VA+K + + + E+ + H H N+
Sbjct: 19 IGEGAYGKVFKAR-DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 620 ILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
L C D + L++E + + +L +L + + E + + +GL++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ +VHRD+K NIL+ Q KLADFGL+RI+ Y PE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D++S G + E+ +P+ + + +G+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 569 LGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYKQFQAEVELLIRAH-----HKNLT 619
+G+G +G V+ D K VA+K + + + E+ + H H N+
Sbjct: 19 IGEGAYGKVFKAR-DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 620 ILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
L C D + L++E + + +L +L + + E + + +GL++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ +VHRD+K NIL+ Q KLADFGL+RI+ Y PE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D++S G + E+ +P+ + + +G+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 567 RVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQ-GYKQFQAEVELLIRAHH-------- 615
+ LG+GGFG V+ +DD A+K + + + ++ EV+ L + H
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 616 ----KNLTILVGYCDEGANMGLIYEFMANGNLQAHL-----LEDKADTLCWERRLQIASE 666
KN T + + + + NL+ + +E++ ++C LQIA
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA-- 128
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL----------SRIFPXXXX 716
+ +E+LH+ ++HRD+K +NI K+ DFGL +
Sbjct: 129 --EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELI 757
Y+ PE N + K D++S G++L EL+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 569 LGKGGFGTVYHGYLDDKQ----VAVKMLSSSSVQGYKQFQAEVELLIRAH-----HKNLT 619
+G+G +G V+ D K VA+K + + + E+ + H H N+
Sbjct: 19 IGEGAYGKVFKAR-DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 620 ILVGYC-----DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
L C D + L++E + + +L +L + + E + + +GL++L
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 136
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ +VHRD+K NIL+ Q KLADFGL+RI+ Y PE
Sbjct: 137 HSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVTLWYRAPEV 190
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D++S G + E+ +P+ + + +G+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 230
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 563 NNFE--RVLGKGGFGTVY-----HGYLDDKQVAVKMLSSSSV----QGYKQFQAEVELLI 611
NFE +VLG G +G V+ G+ K A+K+L +++ + + + E ++L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 612 RAHHKNLTILVGYCDEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI-ASESAQ 669
+ + Y + + LI +++ G L HL + + T E +QI E
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVL 170
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
LE+LH K I++RD+K NILL+ L DFGLS+ F Y
Sbjct: 171 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCGTIEY 226
Query: 730 LDPEYYISNRLTEKS--DVYSFGVVLLELITG 759
+ P+ D +S GV++ EL+TG
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 27/217 (12%)
Query: 565 FERVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILV 622
F + LG+GGF V G D A+K + Q ++ Q E ++ +H N+ LV
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 623 GYC--DEGAN--MGLIYEFMANGNL--QAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
YC + GA L+ F G L + L+DK + L ++ L + +GLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH- 151
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGL----------SRIFPXXXXXXXXXXXXXX 726
HRD+K NILL ++ Q L D G SR
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR---QALTLQDWAAQRCT 206
Query: 727 XXYLDPEYYISNR---LTEKSDVYSFGVVLLELITGQ 760
Y PE + + E++DV+S G VL ++ G+
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ +G G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+M G++ +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ K+ADFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 563 NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHH 615
N FE ++LGKG FG V + A+K+L + + E +L + H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + + E+ G L HL ++ +R +E L+YLH
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH 265
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ + +V+RD+K N++L++ K+ DFGL + YL PE
Sbjct: 266 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVL 321
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQ 760
N D + GVV+ E++ G+
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ +G G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+M G++ +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ K+ADFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 43/222 (19%)
Query: 568 VLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
++G GGFG V+ +D K ++ + ++ + + EV+ L + H N+ G C
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVHYNG-C 73
Query: 626 DEGAN------------------------------MGLIYEFMANGNLQAHLLEDKADTL 655
+G + + + EF G L+ + + + + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 656 CWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXX 715
L++ + +G++Y+H+ ++HRD+K +NI L + Q K+ DFGL
Sbjct: 134 DKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGL---VTSLK 187
Query: 716 XXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELI 757
Y+ PE S ++ D+Y+ G++L EL+
Sbjct: 188 NDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 13/205 (6%)
Query: 563 NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHH 615
N FE ++LGKG FG V + A+K+L + + E +L + H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + + E+ G L HL ++ +R +E L+YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH 268
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ + +V+RD+K N++L++ K+ DFGL + YL PE
Sbjct: 269 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVL 324
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQ 760
N D + GVV+ E++ G+
Sbjct: 325 EDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Query: 554 SYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSS--SSVQGYKQFQAEVEL 609
S F VLK + +G G G V + + VAVK LS + K+ E+ L
Sbjct: 18 STFTVLKRYQQL-KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVL 76
Query: 610 LIRAHHKNLTILVGY------CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQI 663
L +HKN+ L+ +E ++ L+ E M Q +E L ER +
Sbjct: 77 LKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYL 131
Query: 664 ASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ G+++LH+ I+HRD+K +NI++ K+ DFGL+R
Sbjct: 132 LYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPY 185
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775
Y PE + D++S G ++ EL+ G + Q T I QW
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDH---IDQW 234
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 561 ITNNFERV--LGKGGFGTVYHGYLDD--KQVAVK-MLSSSSVQGYKQFQ-AEVELLIRAH 614
+ +E++ +G+G +G V+ D + VA+K L S K+ E+ +L +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
H NL L+ + L++E+ + L H L+ + I ++ Q + +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H K +HRDVK NIL+ + KL DFG +R+ Y PE
Sbjct: 119 H---KHNCIHRDVKPENILITKHSVIKLCDFGFARLL--TGPSDYYDDEVATRWYRSPEL 173
Query: 735 YISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793
+ + + DV++ G V EL++G P+ P ++ + Q L R + +++ R
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSGVPL---WPGKSDVDQL---YLIRKTLGDLIP-RH 226
Query: 794 QGDFDTNTVWKAVEI 808
Q F TN + V+I
Sbjct: 227 QQVFSTNQYFSGVKI 241
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 563 NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHH 615
N FE ++LGKG FG V + A+K+L + + E +L + H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + + E+ G L HL ++ +R +E L+YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLH 127
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ + +V+RD+K N++L++ K+ DFGL + YL PE
Sbjct: 128 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVL 183
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQ 760
N D + GVV+ E++ G+
Sbjct: 184 EDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 563 NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHH 615
N FE ++LGKG FG V + A+K+L + + E +L + H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + + E+ G L HL ++ +R +E L+YLH
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLH 126
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ + +V+RD+K N++L++ K+ DFGL + YL PE
Sbjct: 127 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVL 182
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQ 760
N D + GVV+ E++ G+
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 13/205 (6%)
Query: 563 NNFE--RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQFQ---AEVELLIRAHH 615
N FE ++LGKG FG V + A+K+L + + E +L + H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + + E+ G L HL ++ +R +E L+YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLH 125
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ + +V+RD+K N++L++ K+ DFGL + YL PE
Sbjct: 126 S--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVL 181
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQ 760
N D + GVV+ E++ G+
Sbjct: 182 EDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLS---SSSVQGYKQFQAEVELLIRAHHKNLTIL 621
R +G G +G+V Y ++VAVK LS S + + ++ E+ LL H+N+ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCK 679
+ ++ E L L + K L E + + +GL+Y+H+
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG- 143
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS-N 738
I+HRD+K +N+ +NE + ++ DFGL+R Y PE ++
Sbjct: 144 --IIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 739 RLTEKSDVYSFGVVLLELITGQPVI 763
+ D++S G ++ EL+ G+ +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALF 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 568 VLGKGGFGTVYHGYLDDKQVAVKMLSSSSV-------QGYKQFQAEVELLIRAHHKNLTI 620
+LG+G +G V LD + + + + G + E++LL R HKN+
Sbjct: 12 LLGEGSYGKVKE-VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 621 LVG--YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESA------QGLE 672
LV Y +E M ++ E+ G +++ D++ E+R + GLE
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCG------MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLE 123
Query: 673 YLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDP 732
YLH+ IVH+D+K N+LL K++ G++ + P
Sbjct: 124 YLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180
Query: 733 EYYISNRLTE----KSDVYSFGVVLLELITG 759
E I+N L K D++S GV L + TG
Sbjct: 181 E--IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 143
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 202 VDVWSIGCIMYTLLVGKP 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 569 LGKGGFGTVYHGYLDD--KQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
LG GGFG V D +QVA+K S + +++ E++++ + +H N+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 626 DEGANMG------LIYEFMANGNLQAHLLEDKADTLCWERRLQIA---SESAQGLEYLHN 676
D + L E+ G+L+ +L ++ + C + I S+ + L YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 677 GCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
I+HRD+K NI+L ++ K+ D G ++ YL PE
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 194
Query: 734 YYISNRLTEKSDVYSFGVVLLELITG 759
+ T D +SFG + E ITG
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ FGL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILGFGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 569 LGKGGFGTVYHGYLDD--KQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
LG GGFG V D +QVA+K S + +++ E++++ + +H N+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 626 DEGANMG------LIYEFMANGNLQAHLLEDKADTLCWERRLQIA---SESAQGLEYLHN 676
D + L E+ G+L+ +L ++ + C + I S+ + L YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 677 GCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPE 733
I+HRD+K NI+L ++ K+ D G ++ YL PE
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPE 193
Query: 734 YYISNRLTEKSDVYSFGVVLLELITG 759
+ T D +SFG + E ITG
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 139
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 198 VDVWSIGCIMYTLLVGKP 215
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 139
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 198 VDVWSIGCIMYTLLVGKP 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 567 RVLGKGGFGTV---YHGYLDDKQVAVKMLS---SSSVQGYKQFQAEVELLIRAHHKNLTI 620
R +G G +G+V Y L K VAVK LS S + + ++ E+ LL H+N+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGC 678
L+ ++ E L L + K+ L E + + +GL+Y+H+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS- 737
I+HRD+K +N+ +NE + ++ DFGL+R Y PE ++
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNW 203
Query: 738 NRLTEKSDVYSFGVVLLELITGQPVI 763
+ D++S G ++ EL+ G+ +
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 10/208 (4%)
Query: 556 FDVLKITNNFERVLGKGGFGTVYHG--YLDDKQVAVKMLSSSSV-QGYKQFQAEVELLIR 612
+D L +G GGF V L + VA+K++ +++ + + E+E L
Sbjct: 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKN 64
Query: 613 AHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLE 672
H+++ L + + ++ E+ G L +++ D L E + + +
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVA 122
Query: 673 YLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDP 732
Y+H+ HRD+K N+L +E + KL DFGL P Y P
Sbjct: 123 YVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGNKDYHLQTCCGSLAYAAP 178
Query: 733 EYYISNR-LTEKSDVYSFGVVLLELITG 759
E L ++DV+S G++L L+ G
Sbjct: 179 ELIQGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 161
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 220 VDVWSIGCIMYTLLVGKP 237
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++E + + +L+ + + + QGL + H+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 121 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILL 175
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 565 FERVLGKGGFGTVY---------HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH 615
F LG+G F ++ +G L + +V +K+L + + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK-ADTLCWERRLQIASESAQGLEYL 674
K+L + G C G L+ EF+ G+L +L ++K + W +L++A + A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 675 HNGCKPPIVHRDVKSANILL---------NEKFQAKLADFGLS-RIFPXXXXXXXXXXXX 724
++H +V + NILL N F KL+D G+S + P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITVLP-------KDILQ 178
Query: 725 XXXXYLDPEYYISN--RLTEKSDVYSFGVVLLELITG--QPVIQKTPQRTL 771
++ PE I N L +D +SFG L E+ +G +P+ QR L
Sbjct: 179 ERIPWVPPE-CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL 228
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ D GL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDAGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 560 KITNNFE--RVLGKGGFGTVYHGYLDDK--QVAVKMLSSS--SVQGYKQFQAEVELLIRA 613
K ++N++ LGKG F V + A K++++ S + +++ + E + +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNL----QAHLLEDKAD-TLCWERRLQIASESA 668
H N+ L E + L+++ + G L A +AD + C ++ L+
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------ 115
Query: 669 QGLEYLH-NGCKPPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXX 724
+ Y H NG IVHR++K N+LL K + KLADFGL+
Sbjct: 116 -SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 167
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
YL PE + ++ D+++ GV+L L+ G P Q L Q
Sbjct: 168 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 163
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 222 VDVWSIGCIMYTLLVGKP 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 81/198 (40%), Gaps = 12/198 (6%)
Query: 569 LGKGGFGTVYH-GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH----HKNLTILVG 623
LGKGGF + D K+V + S+ + ++ + I H H+++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIV 683
+ ++ + ++ E +L L + L + G +YLH ++
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 137
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRD+K N+ LNE + K+ DFGL+ Y+ PE + +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 744 SDVYSFGVVLLELITGQP 761
DV+S G ++ L+ G+P
Sbjct: 196 VDVWSIGCIMYTLLVGKP 213
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTIL 621
+V+GKG FG V Y D K VA+KM+ + + ++Q E+ +L +R K+ T+
Sbjct: 103 KVIGKGSFGQVVKAY-DHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 622 VGYCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
V + E ++ + +E ++ NL + ++K + A Q L+ LH
Sbjct: 161 VIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH-- 217
Query: 678 CKPPIVHRDVKSANILLNEKFQA--KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
K I+H D+K NILL ++ ++ K+ DFG S Y PE
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEHQRVYTXIQSRFYRAPEVI 271
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ R D++S G +L EL+TG P++
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 560 KITNNFE--RVLGKGGFGTVYHGYLDDK--QVAVKMLSSS--SVQGYKQFQAEVELLIRA 613
K ++N++ LGKG F V + A K++++ S + +++ + E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNL----QAHLLEDKAD-TLCWERRLQIASESA 668
H N+ L E + L+++ + G L A +AD + C ++ L+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------ 116
Query: 669 QGLEYLH-NGCKPPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXX 724
+ Y H NG IVHR++K N+LL K + KLADFGL+
Sbjct: 117 -SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 168
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
YL PE + ++ D+++ GV+L L+ G P Q L Q
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 218
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ D GL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDRGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 567 RVLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVG 623
RVL +GGF VY ++ A+K L S+ + + EV + + + H N+ V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI---VQ 90
Query: 624 YC----------DEGANMGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASESAQGL 671
+C D G L+ + G L L +E + C + L+I ++ + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSC-DTVLKIFYQTCRAV 149
Query: 672 EYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFG 706
+++H KPPI+HRD+K N+LL+ + KL DFG
Sbjct: 150 QHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 567 RVLGKGGFGTV---YHGYLDDKQVAVKMLS---SSSVQGYKQFQAEVELLIRAHHKNLTI 620
R +G G +G+V Y L K VAVK LS S + + ++ E+ LL H+N+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQK-VAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIG 91
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGC 678
L+ ++ E L L + K L E + + +GL+Y+H+
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS- 737
I+HRD+K +N+ +NE + ++ DFGL+R Y PE ++
Sbjct: 152 ---IIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNW 203
Query: 738 NRLTEKSDVYSFGVVLLELITGQPVI 763
+ D++S G ++ EL+ G+ +
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGKALF 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 32 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 145
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 146 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 193
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ DF L+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFYLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 560 KITNNFE--RVLGKGGFGTVYHGYLDDK--QVAVKMLSSS--SVQGYKQFQAEVELLIRA 613
K ++N++ LGKG F V + A K++++ S + +++ + E + +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNL----QAHLLEDKAD-TLCWERRLQIASESA 668
H N+ L E + L+++ + G L A +AD + C ++ L+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------ 116
Query: 669 QGLEYLH-NGCKPPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXX 724
+ Y H NG IVHR++K N+LL K + KLADFGL+
Sbjct: 117 -SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 168
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
YL PE + ++ D+++ GV+L L+ G P Q L Q
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 565 FERVLGKGGFGTVY---------HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH 615
F LG+G F ++ +G L + +V +K+L + + F ++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK-ADTLCWERRLQIASESAQGLEYL 674
K+L + G C G L+ EF+ G+L +L ++K + W +L++A + A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 675 HNGCKPPIVHRDVKSANILL---------NEKFQAKLADFGLS-RIFPXXXXXXXXXXXX 724
++H +V + NILL N F KL+D G+S + P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPF-IKLSDPGISITVLP-------KDILQ 178
Query: 725 XXXXYLDPEYYISN--RLTEKSDVYSFGVVLLELITG--QPVIQKTPQRTL 771
++ PE I N L +D +SFG L E+ +G +P+ QR L
Sbjct: 179 ERIPWVPPE-CIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLS-SSSVQGYKQFQA-EVELLIRAHHK 616
NF++V +G+G +G VY L + VA+K + + +G E+ LL +H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L+ + L++E + + +L+ + + + QGL + H+
Sbjct: 66 NIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 677 GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
++HRD+K N+L+N + KLADFGL+R F Y PE +
Sbjct: 125 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILL 179
Query: 737 SNRLTEKS-DVYSFGVVLLELIT 758
+ + D++S G + E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 34 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 147
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 148 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 195
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 23 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 136
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 137 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 184
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTIL 621
+V+GKG FG V Y D K VA+KM+ + + ++Q E+ +L +R K+ T+
Sbjct: 103 KVIGKGSFGQVVKAY-DHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 622 VGYCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
V + E ++ + +E ++ NL + ++K + A Q L+ LH
Sbjct: 161 VIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH-- 217
Query: 678 CKPPIVHRDVKSANILLNEKFQA--KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
K I+H D+K NILL ++ ++ K+ DFG S Y PE
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEHQRVYTXIQSRFYRAPEVI 271
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ R D++S G +L EL+TG P++
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 154 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 267
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 268 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 315
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 316 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 569 LGKGGFGTVYH-GYLDDKQV-AVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTI-LVGY 624
LG+G +G V ++ Q+ AVK + ++ + Q K+ ++++ +R T+ G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 625 CDEGANMGLIYEFMANGNLQAHLLE--DKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
++ + E M + +L + DK T+ + +IA + LE+LH+ K +
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLSV 175
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
+HRDVK +N+L+N Q K+ DFG+S Y+ PE I+ L +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPE-RINPELNQ 231
Query: 743 -----KSDVYSFGVVLLEL 756
KSD++S G+ ++EL
Sbjct: 232 KGYSVKSDIWSLGITMIEL 250
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 569 LGKGGFGTVYHGYLDDK---QVAVKMLSS--SSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+G G +G+V + D K +VAVK LS S+ K+ E+ LL H+N+ +G
Sbjct: 30 VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV---IG 85
Query: 624 YCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ------IASESAQGLEYLHNG 677
D + EF + L HL+ + + ++L + + +GL+Y+H+
Sbjct: 86 LLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 144
Query: 678 CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS 737
I+HRD+K +N+ +NE + K+ D GL+R Y PE ++
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDGGLAR-----HTDDEMTGYVATRWYRAPEIMLN 196
Query: 738 -NRLTEKSDVYSFGVVLLELITGQPVIQKT 766
+ D++S G ++ EL+TG+ + T
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDK---QVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTIL 621
+V+GKG FG V Y D K VA+KM+ + + ++Q E+ +L +R K+ T+
Sbjct: 103 KVIGKGXFGQVVKAY-DHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMN 160
Query: 622 VGYCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
V + E ++ + +E ++ NL + ++K + A Q L+ LH
Sbjct: 161 VIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH-- 217
Query: 678 CKPPIVHRDVKSANILLNEKFQA--KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
K I+H D+K NILL ++ ++ K+ DFG S Y PE
Sbjct: 218 -KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS-----CYEHQRVYXXIQSRFYRAPEVI 271
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ R D++S G +L EL+TG P++
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLL 299
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 27 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 140
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 141 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 188
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 560 KITNNFE--RVLGKGGFGTVYHGYLDDK--QVAVKMLSSS--SVQGYKQFQAEVELLIRA 613
K ++N++ LGKG F V + A K++++ S + +++ + E + +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNL----QAHLLEDKAD-TLCWERRLQIASESA 668
H N+ L E + L+++ + G L A +AD + C ++ L+
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE------ 139
Query: 669 QGLEYLH-NGCKPPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXX 724
+ Y H NG IVHR++K N+LL K + KLADFGL+
Sbjct: 140 -SIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFA 191
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
YL PE + ++ D+++ GV+L L+ G P Q L Q
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 241
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 552 KFSYFDV-LKITNNFE--RVLGKGGFGTVYHGY--LDDKQVAVKMLSSS--SVQGYKQFQ 604
K FDV + + +E +G G +G V L +QVA+K + ++ V K+
Sbjct: 43 KARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 102
Query: 605 AEVELLIRAHHKNLTILVGYCDEGANMG---LIYEFMANGNLQAHLLEDKADTLCWERRL 661
E+++L H N+ + G +Y + H + + L E
Sbjct: 103 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+ +GL+Y+H+ ++HRD+K +N+L+NE + K+ DFG++R
Sbjct: 163 YFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 219
Query: 722 XXXXXXX--YLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSS 778
Y PE +S + T+ D++S G + E++ + Q P + + Q
Sbjct: 220 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR---QLFPGKNYVHQLQLI 276
Query: 779 MLARG 783
M+ G
Sbjct: 277 MMVLG 281
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 563 NNFERVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI 620
+NF ++ G+G G V + K VAVK + Q + EV ++ H+N+
Sbjct: 77 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 621 LVGYCDEGANMGLIYEFMANGNL-----QAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ G + ++ EF+ G L + E++ +C ++ AQG
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG----- 190
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFG----LSRIFPXXXXXXXXXXXXXXXXYLD 731
++HRD+KS +ILL + KL+DFG +S+ P ++
Sbjct: 191 ------VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMA 238
Query: 732 PEYYISNRLTEKSDVYSFGVVLLELITGQP 761
PE + D++S G++++E++ G+P
Sbjct: 239 PELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 136
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++E+ ++ DFG ++
Sbjct: 137 IVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----RVKGRTWXLCGT 188
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI--LVGYCD 626
LG+G FG V+ ++DKQ + + V+ + F+AE EL+ A + I L G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQ-CAVKKVR-LEVFRAE-ELMACAGLTSPRIVPLYGAVR 155
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
EG + + E + G+L L++++ L +R L ++ +GLEYLH+ I+H D
Sbjct: 156 EGPWVNIFMELLEGGSL-GQLVKEQG-CLPEDRALYYLGQALEGLEYLHS---RRILHGD 210
Query: 687 VKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXX---XXXXXYLDPEYYISNRLTE 742
VK+ N+LL ++ A L DFG + ++ PE +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDA 270
Query: 743 KSDVYSFGVVLLELITG 759
K DV+S ++L ++ G
Sbjct: 271 KVDVWSSCCMMLHMLNG 287
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ +G G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ K+ADFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 586 QVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYCDEGANMGLIYEFMANGNLQ 644
+ AVK++ S + E+E+L+R H N+ L D+G ++ L+ E M G L
Sbjct: 54 EYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 645 AHLLEDKADTLCWERRLQIASES-AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---- 699
+L K ER + + +EYLH+ +VHRD+K +NIL ++
Sbjct: 110 DKILRQK---FFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPEC 163
Query: 700 AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
++ DFG ++ ++ PE E D++S G++L ++ G
Sbjct: 164 LRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Query: 760 QPVIQKTPQRT 770
P T
Sbjct: 222 YTPFANGPSDT 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 27/210 (12%)
Query: 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V L DK A+K+L+ + + F+ E ++L+ K +T L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWER------RLQIASESAQGLEYLH 675
+ N+ L+ ++ G+L LL D L E + IA +S L Y
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLT-LLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY-- 196
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
VHRD+K NIL++ +LADFG S + Y+ PE
Sbjct: 197 -------VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 736 IS-----NRLTEKSDVYSFGVVLLELITGQ 760
+ R + D +S GV + E++ G+
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 650 DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709
DK T+ + +IA + LE+LH+ K ++HRDVK +N+L+N Q K+ DFG+S
Sbjct: 101 DKGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISG 158
Query: 710 IFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE-----KSDVYSFGVVLLEL 756
Y+ PE I+ L + KSD++S G+ ++EL
Sbjct: 159 YL---VDDVAKDIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 669 QGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX 728
+ L YL K ++HRDVK +NILL+E+ Q KL DFG+S
Sbjct: 135 KALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS---GRLVDDKAKDRSAGCAA 189
Query: 729 YLDPEYYISNRLTE-----KSDVYSFGVVLLELITGQ 760
Y+ PE T+ ++DV+S G+ L+EL TGQ
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 16/197 (8%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI--LVGYCD 626
LG+G FG V+ ++DKQ + + V+ + F+AE EL+ A + I L G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQ-CAVKKVR-LEVFRAE-ELMACAGLTSPRIVPLYGAVR 136
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
EG + + E + G+L L++++ L +R L ++ +GLEYLH+ I+H D
Sbjct: 137 EGPWVNIFMELLEGGSL-GQLVKEQG-CLPEDRALYYLGQALEGLEYLHS---RRILHGD 191
Query: 687 VKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXXX---XXXXYLDPEYYISNRLTE 742
VK+ N+LL ++ A L DFG + ++ PE +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDA 251
Query: 743 KSDVYSFGVVLLELITG 759
K DV+S ++L ++ G
Sbjct: 252 KVDVWSSCCMMLHMLNG 268
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 557 DVLKITN-NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAE-VE---L 609
D +K+T+ NF VLGKG FG V D+ AVK+L V + VE L
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 395
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
+ LT L + + E++ G+L H+ + + A+E A
Sbjct: 396 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAI 453
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
GL +L + I++RD+K N++L+ + K+ADFG+ + Y
Sbjct: 454 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 508
Query: 730 LDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
+ PE + D ++FGV+L E++ GQ
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 18/191 (9%)
Query: 586 QVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYCDEGANMGLIYEFMANGNLQ 644
+ AVK++ S + E+E+L+R H N+ L D+G ++ L+ E M G L
Sbjct: 54 EYAVKVIDKSK----RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELL 109
Query: 645 AHLLEDKADTLCWERRLQIASES-AQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---- 699
+L K ER + + +EYLH+ +VHRD+K +NIL ++
Sbjct: 110 DKILRQK---FFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPEC 163
Query: 700 AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
++ DFG ++ ++ PE E D++S G++L ++ G
Sbjct: 164 LRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Query: 760 QPVIQKTPQRT 770
P T
Sbjct: 222 YTPFANGPSDT 232
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 47/221 (21%)
Query: 563 NNFERV--LGKGGFGTV-----------YHGYLDDKQVAVKMLSSSSVQGYKQFQAEVEL 609
+ FER+ LG G FG V Y + DKQ VK+ K+ Q V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE--- 666
L L + +N+ ++ E+ G + +HL RR+ SE
Sbjct: 102 PF------LVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-----------RRIGRFSEPHA 144
Query: 667 ---SAQ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXX 720
+AQ EYLH+ +++RD+K N+L++++ K+ADFG ++
Sbjct: 145 RFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRT 196
Query: 721 XXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 557 DVLKITN-NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAE-VE---L 609
D +K+T+ NF VLGKG FG V D+ AVK+L V + VE L
Sbjct: 15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
+ LT L + + E++ G+L H+ + + A+E A
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAI 132
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
GL +L + I++RD+K N++L+ + K+ADFG+ + Y
Sbjct: 133 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 187
Query: 730 LDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
+ PE + D ++FGV+L E++ GQ
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
LT L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 150
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ K+ DFG ++
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
LT L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 150
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ K+ DFG ++
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 19/245 (7%)
Query: 552 KFSYFDV-LKITNNFE--RVLGKGGFGTVYHGY--LDDKQVAVKMLSSS--SVQGYKQFQ 604
K FDV + + +E +G G +G V L +QVA+K + ++ V K+
Sbjct: 42 KARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL 101
Query: 605 AEVELLIRAHHKNLTILVGYCDEGANMG---LIYEFMANGNLQAHLLEDKADTLCWERRL 661
E+++L H N+ + G +Y + H + + L E
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+ +GL+Y+H+ ++HRD+K +N+L+NE + K+ DFG++R
Sbjct: 162 YFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF 218
Query: 722 XXXXXXX--YLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSS 778
Y PE +S + T+ D++S G + E++ + Q P + + Q
Sbjct: 219 MTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR---QLFPGKNYVHQLQLI 275
Query: 779 MLARG 783
M+ G
Sbjct: 276 MMVLG 280
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 586 QVAVKMLSSSSVQGYKQFQAEVELLIR--AHHKNLTILVGYCDEGANMGLIYEFMANGNL 643
+V + LS ++ ++ ++R A H ++ L+ + + M L+++ M G L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLA 703
+L E A L + I + + +LH IVHRD+K NILL++ Q +L+
Sbjct: 188 FDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLS 242
Query: 704 DFGLS-RIFPXXXXXXXXXXXXXXXXYLDPEYYISNR------LTEKSDVYSFGVVLLEL 756
DFG S + P YL PE + ++ D+++ GV+L L
Sbjct: 243 DFGFSCHLEP----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
Query: 757 ITGQP 761
+ G P
Sbjct: 299 LAGSP 303
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 555 YFDVLKITNNFERVLGKGGFGTVYHG--YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR 612
+ D+ K+T+ +LG+G + V + K+ AVK++ + + EVE L +
Sbjct: 10 FEDMYKLTSE---LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 613 AH-HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL-QIASESAQG 670
+KN+ L+ + ++ L++E + G++ AH+ + K ER ++ + A
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFN---EREASRVVRDVAAA 123
Query: 671 LEYLHNGCKPPIVHRDVKSANILLN--EKFQ-AKLADFGLSRIFPXXXXXX-----XXXX 722
L++LH I HRD+K NIL EK K+ DF L
Sbjct: 124 LDFLHT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 723 XXXXXXYLDPEY--YISNRLT---EKSDVYSFGVVLLELITGQP 761
Y+ PE +++ T ++ D++S GVVL +++G P
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
LT L + +N+ ++ E+ G + +HL + A++ EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N++++++ K+ DFG ++ YL PE
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLAGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLXGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 568 VLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+LG G FG V+ ++A K++ + ++ ++ + E+ ++ + H NL L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 626 DEGANMGLIYEFMANGNLQAHLLED-----KADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ ++ L+ E++ G L ++++ + DT+ + +++ +G+ ++H +
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI------CEGIRHMH---QM 206
Query: 681 PIVHRDVKSANILL--NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
I+H D+K NIL + Q K+ DFGL+R + +L PE +
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE---FLAPEVVNYD 263
Query: 739 RLTEKSDVYSFGVVLLELITG-QPVIQKTPQRTL 771
++ +D++S GV+ L++G P + TL
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 170
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGT 222
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE IS + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 14/213 (6%)
Query: 569 LGKGGFGTVYH--GYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
LGKG F V L ++ A K++++ S + +++ + E + H N+ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
E + LI++ + G L ++ + + + Q LE + + + +VH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMGVVH 144
Query: 685 RDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
RD+K N+LL K + KLADFGL+ YL PE +
Sbjct: 145 RDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 742 EKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ D+++ GV+L L+ G P Q L Q
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 235
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQ------FQAEVELLIRAHHK 616
+ LG G G V + K+VA+K++S ++ ++ + E+E+L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS------ESAQG 670
+ + + D + ++ E M G L D + +RL+ A+ +
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGEL--------FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 671 LEYLH-NGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
++YLH NG I+HRD+K N+LL+ E K+ DFG S+I
Sbjct: 127 VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 727 XXYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S NR D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYP 217
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQ------FQAEVELLIRAHHK 616
+ LG G G V + K+VA+K++S ++ ++ + E+E+L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS------ESAQG 670
+ + + D + ++ E M G L D + +RL+ A+ +
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGEL--------FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 671 LEYLH-NGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
++YLH NG I+HRD+K N+LL+ E K+ DFG S+I
Sbjct: 127 VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 727 XXYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S NR D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYP 217
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQ------FQAEVELLIRAHHK 616
+ LG G G V + K+VA+K++S ++ ++ + E+E+L + +H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS------ESAQG 670
+ + + D + ++ E M G L D + +RL+ A+ +
Sbjct: 76 CIIKIKNFFD-AEDYYIVLELMEGGEL--------FDKVVGNKRLKEATCKLYFYQMLLA 126
Query: 671 LEYLH-NGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
++YLH NG I+HRD+K N+LL+ E K+ DFG S+I
Sbjct: 127 VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 727 XXYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S NR D +S GV+L ++G P
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYP 217
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQ------FQAEVELLIRAHHK 616
+ LG G G V + K+VA+K++S ++ ++ + E+E+L + +H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS------ESAQG 670
+ + + D + ++ E M G L D + +RL+ A+ +
Sbjct: 75 CIIKIKNFFD-AEDYYIVLELMEGGEL--------FDKVVGNKRLKEATCKLYFYQMLLA 125
Query: 671 LEYLH-NGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
++YLH NG I+HRD+K N+LL+ E K+ DFG S+I
Sbjct: 126 VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 178
Query: 727 XXYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S NR D +S GV+L ++G P
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYP 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 150
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 45/221 (20%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQ------FQAEVELLIRAHHK 616
+ LG G G V + K+VA+K++S ++ ++ + E+E+L + +H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIAS------ESAQG 670
+ + + D + ++ E M G L D + +RL+ A+ +
Sbjct: 82 CIIKIKNFFD-AEDYYIVLELMEGGEL--------FDKVVGNKRLKEATCKLYFYQMLLA 132
Query: 671 LEYLH-NGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
++YLH NG I+HRD+K N+LL+ E K+ DFG S+I
Sbjct: 133 VQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 185
Query: 727 XXYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S NR D +S GV+L ++G P
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAV---DCWSLGVILFICLSGYP 223
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 135
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 136 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 187
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 141
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 142 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 193
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGN-HFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 148
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 150
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 202
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGN-HFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 148
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGN-HFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 148
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 154 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 205
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAGYP 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 149
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 201
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 149
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 201
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E+ G + +HL RR+ SE +A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAA 149
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N++++++ K+ DFG ++
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCG 201
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 149
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 201
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
L L + +N+ ++ E++ G + +HL + A++ EYL
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYL 150
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEI 202
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAGYP 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 13 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 64
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 65 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 123
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 124 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 177
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 222
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ K+ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 150
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 7 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 58
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 59 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 117
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 118 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 171
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 216
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 6 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 57
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 116
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 117 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 170
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 12 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 63
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 64 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 122
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 123 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 176
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V K+ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ K+ DFGL++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 557 DVLKITNNFERVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQ-FQAEVELLIRA 613
D+ KI F+ LG G F V K AVK + +++G + + E+ +L +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 614 HHKNLTILVGYCDEGANMGLIYEFMANGNL------QAHLLEDKADTLCWERRLQIASES 667
H+N+ L + ++ L+ + ++ G L + E A TL +
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLI--------RQV 129
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXX 724
+ YLH + IVHRD+K N+L +E+ + ++DFGLS++
Sbjct: 130 LDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTAC 183
Query: 725 XXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE ++ D +S GV+ L+ G P
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++A G + +HL + A++ EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 180 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 231
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 232 LSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 14 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 65
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 66 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 124
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 125 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 178
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 223
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + ++ A+KML Q + +
Sbjct: 6 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 57
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 58 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 116
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 117 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 170
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 215
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 563 NNFERV--LGKGGFGTVY---HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAH 614
+ FER+ LG G FG V H + A+K+L V KQ + E +L +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SA 668
L L + +N+ ++ E++ G + +HL RR+ SE +A
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAA 169
Query: 669 Q---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 170 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 221
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 257
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 52 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 103
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 104 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 162
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 163 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 216
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 261
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 648 LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL 707
LED+ +C L I + A+ +E+LH+ ++HRD+K +NI K+ DFGL
Sbjct: 158 LEDREHGVC----LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGL 210
Query: 708 ----------SRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELI 757
+ Y+ PE N + K D++S G++L EL+
Sbjct: 211 VTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 8 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 59
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 118
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 119 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 172
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E+ G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N++++++ K+ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 550 NRKFSYFDV-----------LKITNNFERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS- 595
N+ F +FD+ L+ + LG G G V + K+VA++++S
Sbjct: 113 NKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRK 172
Query: 596 -SVQGYKQ------FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLL 648
++ ++ + E+E+L + +H + + + D + ++ E M G L
Sbjct: 173 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGEL----- 226
Query: 649 EDKADTLCWERRLQIAS------ESAQGLEYLH-NGCKPPIVHRDVKSANILLN---EKF 698
D + +RL+ A+ + ++YLH NG I+HRD+K N+LL+ E
Sbjct: 227 ---FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDC 279
Query: 699 QAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS------NRLTEKSDVYSFGVV 752
K+ DFG S+I YL PE +S NR D +S GV+
Sbjct: 280 LIKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVI 333
Query: 753 LLELITGQP 761
L ++G P
Sbjct: 334 LFICLSGYP 342
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ ++ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYP 236
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 22 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 73
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 74 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 132
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 133 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 186
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 231
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++ G + +HL + A++ EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 211
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYP 237
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 8 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 59
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 118
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 119 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 172
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 217
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 56/249 (22%)
Query: 550 NRKFSYFDV-----------LKITNNFERVLGKGGFGTVYHGYLDD--KQVAVKMLSSS- 595
N+ F +FD+ L+ + LG G G V + K+VA++++S
Sbjct: 127 NKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRK 186
Query: 596 -SVQGYKQ------FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLL 648
++ ++ + E+E+L + +H + + + D + ++ E M G L
Sbjct: 187 FAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGEL----- 240
Query: 649 EDKADTLCWERRLQIAS------ESAQGLEYLH-NGCKPPIVHRDVKSANILLN---EKF 698
D + +RL+ A+ + ++YLH NG I+HRD+K N+LL+ E
Sbjct: 241 ---FDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPENVLLSSQEEDC 293
Query: 699 QAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS------NRLTEKSDVYSFGVV 752
K+ DFG S+I YL PE +S NR D +S GV+
Sbjct: 294 LIKITDFGHSKIL---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV---DCWSLGVI 347
Query: 753 LLELITGQP 761
L ++G P
Sbjct: 348 LFICLSGYP 356
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++ G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
L L + +N+ ++ E++ G + +HL + A++ EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 676 NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
+ +++RD+K N+L++++ ++ DFG ++ YL PE
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGTPEYLAPEII 210
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQP 761
+S + D ++ GV++ E+ G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 26/225 (11%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 58 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 109
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 110 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 168
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 169 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTS 222
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D++S GV++ L+ G P
Sbjct: 223 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 267
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 32/203 (15%)
Query: 569 LGKGGFGTVYHG--------------YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+G+G +GTV+ LDD V SS+++ E+ LL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV---PSSALR-------EICLLKELK 59
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
HKN+ L + L++EF + +L+ + D L E + +GL +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFC 117
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ ++HRD+K N+L+N + KLADFGL+R F Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDV 172
Query: 735 YISNRLTEKS-DVYSFGVVLLEL 756
+L S D++S G + EL
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 25/230 (10%)
Query: 537 KQAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSS 594
+++GK SL L++ FD+L RV+G+G + V L D+ A+K++
Sbjct: 8 RESGKASSSLGLQD-----FDLL-------RVIGRGSYAKVLLVRLKKTDRIYAMKVVKK 55
Query: 595 SSVQGYKQF---QAEVELLIRAHHKNLTILVGYCDEG-ANMGLIYEFMANGNLQAHLLED 650
V + Q E + +A + + + C + + + + E++ G+L H+
Sbjct: 56 ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 115
Query: 651 KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710
+ L E ++E + L YLH + I++RD+K N+LL+ + KL D+G+ +
Sbjct: 116 R--KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK- 169
Query: 711 FPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE D ++ GV++ E++ G+
Sbjct: 170 -EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 569 LGKGGFGTVYHGYLDD--KQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
LGKG F V ++ A K++++ S + +++ + E + H N+ L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
E L+++ + G L ++ + + + Q LE +++ + IVH
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEADASHCIHQILESVNHIHQHDIVH 153
Query: 685 RDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
RD+K N+LL K + KLADFGL+ YL PE +
Sbjct: 154 RDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 742 EKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ D+++ GV+L L+ G P Q L Q
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ FER+ LG G FG V A+K+L V K+ + E +L +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E+ G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N++++++ ++ DFGL++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
YL P +S + D ++ GV++ E+ G P
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 18/191 (9%)
Query: 586 QVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYCDEGANMGLIYEFMANGNLQ 644
+ AVK++ S + E+E+L+R H N+ L D+G + ++ E M G L
Sbjct: 49 EFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELL 104
Query: 645 AHLLEDKADTLCWERRLQ-IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----Q 699
+L K ER + + +EYLH +VHRD+K +NIL ++
Sbjct: 105 DKILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPES 158
Query: 700 AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
++ DFG ++ ++ PE D++S GV+L ++TG
Sbjct: 159 IRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
Query: 760 QPVIQKTPQRT 770
P T
Sbjct: 217 YTPFANGPDDT 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 601 KQFQAEVELLIRAHHKNLTILVGYCDE--GANMGLIYEFMANGNLQ-----AHLLEDKAD 653
+Q E+ +L + H N+ LV D+ ++ +++E + G + L ED+A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA- 139
Query: 654 TLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPX 713
R + +G+EYLH I+HRD+K +N+L+ E K+ADFG+S F
Sbjct: 140 ------RFYF-QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-- 187
Query: 714 XXXXXXXXXXXXXXXYLDPEYYISNR--LTEKS-DVYSFGVVLLELITGQ 760
++ PE R + K+ DV++ GV L + GQ
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +QG E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHS 140
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 188
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 33/211 (15%)
Query: 569 LGKGGFGTVYHG--------------YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
+G+G +GTV+ LDD V SS+++ E+ LL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGV---PSSALR-------EICLLKELK 59
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674
HKN+ L + L++EF + +L+ + D L E + +GL +
Sbjct: 60 HKNIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFC 117
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
H+ ++HRD+K N+L+N + KLA+FGL+R F Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDV 172
Query: 735 YISNRLTEKS-DVYSFGVVLLELI-TGQPVI 763
+L S D++S G + EL G+P+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 11/195 (5%)
Query: 569 LGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG V+ A K + + + + E++ + H L L +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ M +IYEFM+ G L + D+ + + + ++ + +GL ++H VH D
Sbjct: 225 DDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLD 280
Query: 687 VKSANILLNEKF--QAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKS 744
+K NI+ K + KL DFGL+ + PE + +
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYT 337
Query: 745 DVYSFGVVLLELITG 759
D++S GV+ L++G
Sbjct: 338 DMWSVGVLSYILLSG 352
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +QG E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHS 140
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 188
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 569 LGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD 626
LG G FG V+ A K + + + + E++ + H L L +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 627 EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRD 686
+ M +IYEFM+ G L + D+ + + + ++ + +GL ++H VH D
Sbjct: 119 DDNEMVMIYEFMSGGEL-FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLD 174
Query: 687 VKSANILLNEKF--QAKLADFGLS 708
+K NI+ K + KL DFGL+
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLT 198
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Query: 537 KQAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSS 594
+++GK SL L++ FD+L RV+G+G + V L D+ A++++
Sbjct: 40 RESGKASSSLGLQD-----FDLL-------RVIGRGSYAKVLLVRLKKTDRIYAMRVVKK 87
Query: 595 SSVQGYKQF---QAEVELLIRAHHKNLTILVGYCDEG-ANMGLIYEFMANGNLQAHLLED 650
V + Q E + +A + + + C + + + + E++ G+L H+
Sbjct: 88 ELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 147
Query: 651 KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710
+ L E ++E + L YLH + I++RD+K N+LL+ + KL D+G+ +
Sbjct: 148 RK--LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK- 201
Query: 711 FPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ 760
Y+ PE D ++ GV++ E++ G+
Sbjct: 202 -EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 557 DVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQAEVELLIRAH 614
D L E LG+G VY Q A+K+L + + K + E+ +L+R
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLS 106
Query: 615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLE-------DKADTLCWERRLQIASES 667
H N+ L + + L+ E + G L ++E D AD + +
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAV---------KQI 157
Query: 668 AQGLEYLH-NGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPXXXXXXXXXXX 723
+ + YLH NG IVHRD+K N+L K+ADFGLS+I
Sbjct: 158 LEAVAYLHENG----IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTV 210
Query: 724 XXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y PE + D++S G++ L+ G
Sbjct: 211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 568 VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQ------AEVELLIR----AHH 615
+LGKGGFGTV+ G+ D QVA+K++ + V G+ EV LL + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ L+ + + L+ E + +K R A +++ H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVA-AIQHCH 156
Query: 676 NGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
+ +VHRD+K NIL++ + AKL DFG + Y PE+
Sbjct: 157 SRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL----HDEPYTDFDGTRVYSPPEW 209
Query: 735 YISNRLTE-KSDVYSFGVVLLELITG 759
++ + V+S G++L +++ G
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +QG E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHS 140
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY- 734
I HRD+K N+LL+ KL DFG ++ Y PE
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELI 194
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ + T DV+S G VL EL+ GQP+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 569 LGKGGFGTVYH--GYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
LGKG F V L ++ A ++++ S + +++ + E + H N+ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 625 CDEGANMGLIYEFMANGNLQAHLLE----DKADTLCWERRLQIASESAQG-LEYLHNGCK 679
E + LI++ + G L ++ +AD AS Q LE + + +
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEAD----------ASHCIQQILEAVLHCHQ 128
Query: 680 PPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
+VHR++K N+LL K + KLADFGL+ YL PE
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D+++ GV+L L+ G P Q L Q
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQ 224
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 18/198 (9%)
Query: 569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRA---HHKNLTILVGYC 625
LG+G FG V+ + DKQ + +V+ + VE L+ + L G
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQ----CAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHR 685
EG + + E + G+L L + L +R L ++ +GLEYLH I+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHG 188
Query: 686 DVKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXXX---XXXXYLDPEYYISNRLT 741
DVK+ N+LL ++ +A L DFG + ++ PE +
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD 248
Query: 742 EKSDVYSFGVVLLELITG 759
K D++S ++L ++ G
Sbjct: 249 AKVDIWSSCCMMLHMLNG 266
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
G+ Y H+ ++HRD+K N+L+N + + K+ADFGL+R F Y
Sbjct: 112 GIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWY 166
Query: 730 LDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
P+ + S + + D++S G + E++ G P+
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPL 200
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 650 DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709
DK T+ + +IA + LE+LH+ K ++HRDVK +N+L+N Q K DFG+S
Sbjct: 128 DKGQTIPEDILGKIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISG 185
Query: 710 IFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE-----KSDVYSFGVVLLEL 756
Y PE I+ L + KSD++S G+ +EL
Sbjct: 186 YL---VDDVAKDIDAGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
G+ Y H+ ++HRD+K N+L+N + + K+ADFGL+R F Y
Sbjct: 112 GIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWY 166
Query: 730 LDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
P+ + S + + D++S G + E++ G P+
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXY 729
G+ Y H+ ++HRD+K N+L+N + + K+ADFGL+R F Y
Sbjct: 112 GIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWY 166
Query: 730 LDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
P+ + S + + D++S G + E++ G P+
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 48/181 (26%)
Query: 559 LKITNNFER--VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
L+ ++FE VLG+G FG V LD + A+K + + + +EV LL +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLN 60
Query: 615 HK--------------------------NLTILVGYCDEGANMGLIYEFMANGNLQAHLL 648
H+ L I + YC+ G +Y+ + + NL
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGT----LYDLIHSENLNQQRD 116
Query: 649 EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
E W QI + L Y+H+ I+HRD+K NI ++E K+ DFGL+
Sbjct: 117 E------YWRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 709 R 709
+
Sbjct: 164 K 164
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 563 NNFERV--LGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQA---EVELLIRAHH 615
+ F+R+ LG G FG V A+K+L V KQ + E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 616 KNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASE------SAQ 669
L L + +N+ ++ E++A G + +HL RR+ SE +AQ
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-----------RRIGRFSEPHARFYAAQ 149
Query: 670 ---GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXX 726
EYLH+ +++RD+K N+L++++ ++ DFG ++
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201
Query: 727 XXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
L PE +S + D ++ GV++ E+ G P
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 670 GLEYLHNGCKPPIVHRDVKSANILL----NEKFQAKLADFGLSRIF-PXXXXXXXXXXXX 724
G+ YLH ++HRD+K ANIL+ E+ + K+AD G +R+F
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 725 XXXXYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQ 764
Y PE + R T+ D+++ G + EL+T +P+
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 558 VLKITNNFERVLGKGGFGT-VYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHK 616
V KI+ + VLG G GT VY G D++ VAVK + + + EV+LL R +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILP---ECFSFADREVQLL-RESDE 76
Query: 617 NLTILVGYCDE-GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH 675
+ ++ +C E I + LQ ++ + L E + + ++ GL +LH
Sbjct: 77 HPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLH 135
Query: 676 NGCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSR 709
+ IVHRD+K NIL+ + K +A ++DFGL +
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 567 RVLGKGGFGTVYHGYL-DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC 625
+V+G G FG V+ L + +VA+K + +Q + E++++ H N+ L +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 626 DEGAN------MGLIYEFMANGNLQA--HLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
+ + L+ E++ +A H + K +L + + + L Y+H+
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY-QLLRSLAYIHSI 160
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++I Y PE +
Sbjct: 161 G---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRYYRAPELIF 214
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG 783
+ T D++S G V+ EL+ GQP+ P + I Q V + G
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLF---PGESGIDQLVEIIKVLG 259
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHS 174
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 222
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHS 176
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 177 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 224
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 141
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYYR 189
Query: 737 SNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 553 FSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR 612
+ Y + + + RV G+G FG V+ + DKQ + +V+ + VE L+
Sbjct: 51 YEYREEVHWMTHQPRV-GRGSFGEVHR--MKDKQTGFQ----CAVKKVRLEVFRVEELVA 103
Query: 613 A---HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
+ L G EG + + E + G+L L + L +R L ++ +
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLGQALE 161
Query: 670 GLEYLHNGCKPPIVHRDVKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXXX---X 725
GLEYLH I+H DVK+ N+LL ++ +A L DFG +
Sbjct: 162 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
++ PE + K D++S ++L ++ G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHS 174
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY- 734
I HRD+K N+LL+ KL DFG ++ Y PE
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELI 228
Query: 735 YISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ + T DV+S G VL EL+ GQP+
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANI 692
LI E+ A G + + L + A+ + +++ + +G+ YLH IVH D+K NI
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNI 162
Query: 693 LLNEKF---QAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSF 749
LL+ + K+ DFG+SR YL PE + +T +D+++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 750 GVVLLELIT-GQPVIQKTPQRTLI 772
G++ L+T P + + Q T +
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYL 243
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHS 168
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 216
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 141
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 195
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 141
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 195
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 24/218 (11%)
Query: 569 LGKGGFGTVYHGYL--DDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
LGKG F V ++ A K++++ S + +++ + E + H N+ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 625 CDEGANMGLIYEFMANGNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCK- 679
E L+++ + G L ++ +AD AS Q + N C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD----------ASHCIQQILESVNHCHL 121
Query: 680 PPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
IVHRD+K N+LL K + KLADFGL+ YL PE
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D+++ GV+L L+ G P Q L Q
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 39 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSF 154
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 155 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYYR 202
Query: 737 SNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 45 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSF 160
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 161 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 214
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 27 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 142
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 143 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 196
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHS 178
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 179 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 226
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 24/218 (11%)
Query: 569 LGKGGFGTVYHGYL--DDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
LGKG F V ++ A K++++ S + +++ + E + H N+ L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 625 CDEGANMGLIYEFMANGNLQAHLLE----DKADTLCWERRLQIASESAQGLEYLHNGCK- 679
E L+++ + G L ++ +AD AS Q + N C
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD----------ASHCIQQILESVNHCHL 121
Query: 680 PPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
IVHRD+K N+LL K + KLADFGL+ YL PE
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 737 SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ + D+++ GV+L L+ G P Q L Q
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQ 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 34 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 149
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 150 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 203
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 38 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHSF 153
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 207
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 38 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 153
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 154 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 207
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 31 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 146
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 147 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYYR 194
Query: 737 SNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)
Query: 553 FSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR 612
+ Y + + + RV G+G FG V+ + DKQ + +V+ + VE L+
Sbjct: 67 YEYREEVHWMTHQPRV-GRGSFGEVHR--MKDKQTGFQ----CAVKKVRLEVFRVEELVA 119
Query: 613 A---HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQ 669
+ L G EG + + E + G+L L + L +R L ++ +
Sbjct: 120 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ--LIKQMGCLPEDRALYYLGQALE 177
Query: 670 GLEYLHNGCKPPIVHRDVKSANILL-NEKFQAKLADFGLSRIFPXXXXXXXXXXXX---X 725
GLEYLH I+H DVK+ N+LL ++ +A L DFG +
Sbjct: 178 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 726 XXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
++ PE + K D++S ++L ++ G
Sbjct: 235 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 26 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 141
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 142 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 195
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 682 IVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
+VHRD+K N+L N+ + K+ DFG +R+ P Y PE N
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH--YAAPELLNQN 184
Query: 739 RLTEKSDVYSFGVVLLELITGQPVIQ 764
E D++S GV+L +++GQ Q
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 542 KKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQG 599
K+GS+ + Y+D+L+ LG G FG V+ + K +++
Sbjct: 45 KQGSV------YDYYDILE-------ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD 91
Query: 600 YKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWER 659
+ E+ ++ + HH L L ++ M LI EF++ G L + + +
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAE 150
Query: 660 RLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQA--KLADFGLS 708
+ ++ +GL+++H IVH D+K NI+ K + K+ DFGL+
Sbjct: 151 VINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL--- 621
+V+G G FG VY L D + VA+K + +Q + E++++ + H N+ L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 622 ---VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY-QLFRSLAYIHS 219
Query: 677 GCKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I HRD+K N+LL+ KL DFG ++ Y+ YY
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---------QLVRGEPNVSYICSRYY 267
Query: 736 ISNRL-------TEKSDVYSFGVVLLELITGQPVI 763
+ L T DV+S G VL EL+ GQP+
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQ-AEVELLIRAHHKNLTIL---- 621
+V+G G FG VY L D + ++++ V K+F+ E++++ + H N+ L
Sbjct: 30 KVIGNGSFGVVYQAKLCD---SGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 622 --VGYCDEGANMGLIYEFMANG--NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG 677
G + + L+ +++ + H K +L + + + L Y+H+
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSF 145
Query: 678 CKPPIVHRDVKSANILLNEKFQA-KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY-Y 735
I HRD+K N+LL+ KL DFG ++ Y PE +
Sbjct: 146 G---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRAPELIF 199
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVI 763
+ T DV+S G VL EL+ GQP+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTIL 621
NF L + G ++ G + VK+L S + + F E L H N+ +
Sbjct: 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72
Query: 622 VGYCDE--GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+G C + LI +M G+L L E + + ++ A + A+G+ +LH +
Sbjct: 73 LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LE 131
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
P I + S +++++E A+++ + F PE +NR
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPED--TNR 189
Query: 740 LTEKSDVYSFGVVLLELITGQ 760
+D++SF V+L EL+T +
Sbjct: 190 --RSADMWSFAVLLWELVTRE 208
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 563 NNFERV--LGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQA--EVELLIRAHHK 616
+ + R+ LG+G +G VY + ++ VA+K + + A EV LL H+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 617 NLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN 676
N+ L + LI+E+ N +L+ ++ DK + + G+ + H+
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DLKKYM--DKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 677 -GCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYL 730
C +HRD+K N+LL +E K+ DFGL+R F Y
Sbjct: 151 RRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYR 204
Query: 731 DPEYYISNRLTEKS-DVYSFGVVLLELITGQPV 762
PE + +R S D++S + E++ P+
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPL 237
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL 621
E +G+G +G V ++ A K + V+ +F+ E+E++ H N+ L
Sbjct: 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
++ ++ L+ E G L ++ + R I + + Y H K
Sbjct: 72 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KLN 126
Query: 682 IVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
+ HRD+K N L + KL DFGL+ F + YY+S
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---------VGTPYYVSP 177
Query: 739 RLTE-----KSDVYSFGVVLLELITGQP 761
++ E + D +S GV++ L+ G P
Sbjct: 178 QVLEGLYGPECDEWSAGVMMYVLLCGYP 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
+I + + L +L K I+HRD+K +NILL+ KL DFG+S
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKT 183
Query: 722 XXXXXXXYLDPEYYISNRLTE----KSDVYSFGVVLLELITGQ 760
Y+ PE + + +SDV+S G+ L EL TG+
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 14/213 (6%)
Query: 569 LGKGGFGTVYH--GYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGY 624
+GKG F V + A K++++ S + +++ + E + H N+ L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVH 684
E L+++ + G L ++ + + + Q LE + + + +VH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMGVVH 126
Query: 685 RDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
RD+K N+LL K + KLADFGL+ YL PE
Sbjct: 127 RDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 742 EKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
+ D+++ GV+L L+ G P Q L Q
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQ 217
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 24/208 (11%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQV--AVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL 621
E +G+G +G V ++ A K + V+ +F+ E+E++ H N+ L
Sbjct: 29 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
++ ++ L+ E G L ++ + R I + + Y H K
Sbjct: 89 YETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR--IMKDVLSAVAYCH---KLN 143
Query: 682 IVHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISN 738
+ HRD+K N L + KL DFGL+ F + YY+S
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---------VGTPYYVSP 194
Query: 739 RLTE-----KSDVYSFGVVLLELITGQP 761
++ E + D +S GV++ L+ G P
Sbjct: 195 QVLEGLYGPECDEWSAGVMMYVLLCGYP 222
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 568 VLGKGGFGTVYHGYLDD--KQVAVKML-----SSSSVQGYKQFQAEVELLIRAHHKNLTI 620
V+GKG F V + +Q AVK++ +SS + + E + H ++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 621 LVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRL--QIASESAQGLEYLHNGC 678
L+ + +++EFM +L +++ + + + + L Y H+
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 679 KPPIVHRDVKSANILLNEKFQA---KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYY 735
I+HRDVK N+LL K + KL DFG++ ++ PE
Sbjct: 150 --NIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 736 ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIG 773
+ DV+ GV+L L++G T +R G
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 243
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 26/244 (10%)
Query: 546 LELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQ 602
L EN F V + + +G GG V+ + KQ+ A+K L + Q
Sbjct: 13 LGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS 72
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRL 661
++ E+ L + + I+ Y E + IY M GN+ + L+ K WER+
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK- 130
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
S LE +H + IVH D+K AN L+ + KL DFG++
Sbjct: 131 ---SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 186
Query: 722 XXXXXXXYLDPEYYISNRLTEKS-----------DVYSFGVVLLELITGQPVIQKTPQRT 770
Y+ PE + ++ DV+S G +L + G KTP +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQ 241
Query: 771 LIGQ 774
+I Q
Sbjct: 242 IINQ 245
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 91/223 (40%), Gaps = 22/223 (9%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEV 607
L+ +K + D K+T+ +VLG G G V + Q + + +Q + + EV
Sbjct: 52 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQ---EKFALKXLQDCPKARREV 105
Query: 608 ELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERRL- 661
EL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 106 ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI-QDRGDQAFTEREAS 164
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXXXX 718
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 165 EIXKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHN 218
Query: 719 XXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
Y+ PE + + D +S GV+ L+ G P
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYP 261
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 21/212 (9%)
Query: 566 ERVLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILV 622
E VLG+G V + ++ AVK++ + EVE+L + H+N+ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
+ +E L++E M G++ +H+ K + + A L++LHN I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHN---KGI 132
Query: 683 VHRDVKSANILL---NEKFQAKLADFGLSRIFPXXX-----XXXXXXXXXXXXXYLDPEY 734
HRD+K NIL N+ K+ DFGL Y+ PE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 735 Y-----ISNRLTEKSDVYSFGVVLLELITGQP 761
++ ++ D++S GV+L L++G P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 618 LTILVGYCDEGANMGLIYEFM-----------ANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E M G LQ E+ A + W +
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQ----EELARSFFW--------Q 122
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 123 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 175
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANI 692
+I E M G L + + E +I + +++LH+ I HRDVK N+
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENL 159
Query: 693 LLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSF 749
L K + KL DFG F Y+ PE + + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFG----FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 750 GVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR 782
GV++ L+ G P P + GQ +S + R
Sbjct: 216 GVIMYILLCGFP-----PFYSNTGQAISPGMKR 243
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANI 692
+I E M G L + + E +I + +++LH+ I HRDVK N+
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENL 140
Query: 693 LLNEKFQ---AKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSF 749
L K + KL DFG F Y+ PE + + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFG----FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 750 GVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR 782
GV++ L+ G P P + GQ +S + R
Sbjct: 197 GVIMYILLCGFP-----PFYSNTGQAISPGMKR 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 585 KQVAVKML--------SSSSVQGYKQFQ-AEVELLIR-AHHKNLTILVGYCDEGANMGLI 634
K+ AVK++ S+ VQ ++ EV++L + + H N+ L + L+
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 89
Query: 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL 694
++ M G L +L E TL + +I + + LH K IVHRD+K NILL
Sbjct: 90 FDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILL 144
Query: 695 NEKFQAKLADFGLS-RIFPXXXXXXXXXXXXXXXXYLDPEYYISNR------LTEKSDVY 747
++ KL DFG S ++ P YL PE + ++ D++
Sbjct: 145 DDDMNIKLTDFGFSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 200
Query: 748 SFGVVLLELITGQP 761
S GV++ L+ G P
Sbjct: 201 STGVIMYTLLAGSP 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 99/244 (40%), Gaps = 26/244 (10%)
Query: 546 LELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQ 602
L EN F V + + +G GG V+ + KQ+ A+K L + Q
Sbjct: 13 LGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS 72
Query: 603 FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRL 661
++ E+ L + + I+ Y E + IY M GN+ + L+ K WER+
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK- 130
Query: 662 QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXX 721
S LE +H + IVH D+K AN L+ + KL DFG++
Sbjct: 131 ---SYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKD 186
Query: 722 XXXXXXXYLDPEYYISNRLTEKS-----------DVYSFGVVLLELITGQPVIQKTPQRT 770
Y+ PE + ++ DV+S G +L + G KTP +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQ 241
Query: 771 LIGQ 774
+I Q
Sbjct: 242 IINQ 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 585 KQVAVKML--------SSSSVQGYKQFQ-AEVELLIR-AHHKNLTILVGYCDEGANMGLI 634
K+ AVK++ S+ VQ ++ EV++L + + H N+ L + L+
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL 694
++ M G L +L E TL + +I + + LH K IVHRD+K NILL
Sbjct: 103 FDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILL 157
Query: 695 NEKFQAKLADFGLS-RIFPXXXXXXXXXXXXXXXXYLDPEYYISNR------LTEKSDVY 747
++ KL DFG S ++ P YL PE + ++ D++
Sbjct: 158 DDDMNIKLTDFGFSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 748 SFGVVLLELITGQP 761
S GV++ L+ G P
Sbjct: 214 STGVIMYTLLAGSP 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNLTIL 621
RV+G+G + V L D+ A+K++ V + Q E + +A + +
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 622 VGYCDEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ C + + + + E++ G+L H+ + L E ++E + L YLH +
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLH---ER 129
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
I++RD+K N+LL+ + KL D+G+ + Y+ PE
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 741 TEKSDVYSFGVVLLELITGQ 760
D ++ GV++ E++ G+
Sbjct: 188 GFSVDWWALGVLMFEMMAGR 207
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 585 KQVAVKML--------SSSSVQGYKQFQ-AEVELLIR-AHHKNLTILVGYCDEGANMGLI 634
K+ AVK++ S+ VQ ++ EV++L + + H N+ L + L+
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLV 102
Query: 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL 694
++ M G L +L E TL + +I + + LH K IVHRD+K NILL
Sbjct: 103 FDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILL 157
Query: 695 NEKFQAKLADFGLS-RIFPXXXXXXXXXXXXXXXXYLDPEYYISNR------LTEKSDVY 747
++ KL DFG S ++ P YL PE + ++ D++
Sbjct: 158 DDDMNIKLTDFGFSCQLDP----GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 213
Query: 748 SFGVVLLELITGQP 761
S GV++ L+ G P
Sbjct: 214 STGVIMYTLLAGSP 227
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQF---QAEVELLIRAHHKNLTIL 621
RV+G+G + V L D+ A+K++ V + Q E + +A + +
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 622 VGYCDEG-ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKP 680
+ C + + + + E++ G+L H+ + L E ++E + L YLH +
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLH---ER 125
Query: 681 PIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRL 740
I++RD+K N+LL+ + KL D+G+ + Y+ PE
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 741 TEKSDVYSFGVVLLELITGQ 760
D ++ GV++ E++ G+
Sbjct: 184 GFSVDWWALGVLMFEMMAGR 203
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 18 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 77
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 78 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 132
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 133 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 122 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 176
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 273
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 684 HRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEK 743
HRDVK NIL++ A L DFG++ Y PE + + T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 744 SDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR 782
+D+Y+ VL E +TG P Q Q ++ G ++ + R
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGD-QLSVXGAHINQAIPR 253
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQG-----------------YKQFQAEVEL 609
R L +G F + D+K A+K S ++ Y F+ E+++
Sbjct: 37 RTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQI 96
Query: 610 LIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL----QAHLLEDKADTLCW---ERRLQ 662
+ ++ G + +IYE+M N ++ + + DK T C+ +
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT-CFIPIQVIKC 155
Query: 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
I Y+HN + I HRDVK +NIL+++ + KL+DFG S
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 584 DKQVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYCDEGANMGLIYEFMANGN 642
+ + AVK++ S + E+E+L+R H N+ L D+G + ++ E G
Sbjct: 47 NXEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGE 102
Query: 643 LQAHLLEDKADTLCWERRLQ-IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF--- 698
L +L K ER + + +EYLH +VHRD+K +NIL ++
Sbjct: 103 LLDKILRQK---FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNP 156
Query: 699 -QAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELI 757
++ DFG ++ ++ PE D++S GV+L +
Sbjct: 157 ESIRICDFGFAKQL--RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
Query: 758 TGQPVIQKTPQRT 770
TG P T
Sbjct: 215 TGYTPFANGPDDT 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 60/266 (22%)
Query: 549 ENRKFSYFDVLKITNNF--ERVLGKGGFGTVYHGYLDDKQV--AVKMLSSSSV-----QG 599
EN F +L++ + + +G+G +G V + + A+K+++ + + +
Sbjct: 12 ENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKD 71
Query: 600 YKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL---------------- 643
++ + EV L+ + HH N+ L ++ + L+ E G+L
Sbjct: 72 VERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCA 131
Query: 644 ---------------------QAHLLEDKADTLCWERRL-QIASESAQGLEYLHNGCKPP 681
H + D + E+ + I + L YLHN
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QG 188
Query: 682 IVHRDVKSANILL--NEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXX--YLDPEYYIS 737
I HRD+K N L N+ F+ KL DFGLS+ F ++ PE +
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE--VL 246
Query: 738 NRLTE----KSDVYSFGVVLLELITG 759
N E K D +S GV+L L+ G
Sbjct: 247 NTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 74/181 (40%), Gaps = 48/181 (26%)
Query: 559 LKITNNFER--VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
L+ ++FE VLG+G FG V LD + A+K + + + +EV LL +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLN 60
Query: 615 HK--------------------------NLTILVGYCDEGANMGLIYEFMANGNLQAHLL 648
H+ L I + YC+ +Y+ + + NL
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRT----LYDLIHSENLNQQRD 116
Query: 649 EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
E W QI + L Y+H+ I+HRD+K NI ++E K+ DFGL+
Sbjct: 117 E------YWRLFRQIL----EALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Query: 709 R 709
+
Sbjct: 164 K 164
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 150
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 151 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 203
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 137
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 138 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 190
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 14 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 73
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 74 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 128
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 129 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 225
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 137
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 138 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 190
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 549 ENRKFSYFDVLKITNNF--ERVLGKGGFGTVYHGYLD--DKQVAVKMLSS--SSVQGYKQ 602
EN F + + +N+ + ++G+G +G VY Y +K VA+K ++ + K+
Sbjct: 12 ENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR 71
Query: 603 FQAEVELLIRAHHKNLTILVGYC--DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERR 660
E+ +L R + L D+ +Y + + L L E
Sbjct: 72 ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI 131
Query: 661 LQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709
I G ++H I+HRD+K AN LLN+ K+ DFGL+R
Sbjct: 132 KTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 151
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 152 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 204
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 150
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 151 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 203
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 122
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 123 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 175
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 150
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 151 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 203
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 150
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 151 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 203
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 151
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 152 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 204
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 151
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 152 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 204
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 35/171 (20%)
Query: 559 LKITNNFE--RVLGKGGFGTVYHGYLDD--KQVAVKMLSS--SSVQGYKQFQAEVELL-- 610
+K+ +N+E ++G+G +G VY Y + K VA+K ++ + K+ E+ +L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 611 ------IRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQA------HLLEDKADTLCWE 658
IR H + + DE + ++ E +A+ +L+ L E T+ +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDE---LYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 659 RRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709
L G +++H I+HRD+K AN LLN+ K+ DFGL+R
Sbjct: 140 LLL--------GEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 165
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 166 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 218
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 170
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 171 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 223
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 138
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 139 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 191
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 151
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 152 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 204
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 123
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 124 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 176
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 123
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 124 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 176
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 157
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 158 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 210
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 118
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 119 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 171
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 138
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 139 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 191
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 138
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 139 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 191
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 75 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 129
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 130 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 226
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 558 VLKITNNFE--RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYK-QFQAEVELLIR 612
V I+++F+ +LG+G +G V + VA+K + + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 613 AHHKNLTIL--VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ-IASESAQ 669
H+N+ + + D N +Y + +Q L + + + +Q ++ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX--------XXXXX 721
++ LH ++HRD+K +N+L+N K+ DFGL+RI
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 722 XXXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y PE + S + + DV+S G +L EL +P+
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 123
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 124 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 176
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 118
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 119 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 171
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 558 VLKITNNFE--RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYK-QFQAEVELLIR 612
V I+++F+ +LG+G +G V + VA+K + + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 613 AHHKNLTIL--VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ-IASESAQ 669
H+N+ + + D N +Y + +Q L + + + +Q ++ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX--------XXXXX 721
++ LH ++HRD+K +N+L+N K+ DFGL+RI
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 722 XXXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y PE + S + + DV+S G +L EL +P+
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 558 VLKITNNFE--RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYK-QFQAEVELLIR 612
V I+++F+ +LG+G +G V + VA+K + + + E+++L
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 613 AHHKNLTIL--VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQ-IASESAQ 669
H+N+ + + D N +Y + +Q L + + + +Q ++ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 670 GLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXX--------XXXXX 721
++ LH ++HRD+K +N+L+N K+ DFGL+RI
Sbjct: 124 AVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 722 XXXXXXXYLDPEYYI-SNRLTEKSDVYSFGVVLLELITGQPV 762
Y PE + S + + DV+S G +L EL +P+
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 121
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 122 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 174
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 145
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 146 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 198
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 199 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W +
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------Q 165
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
+ + + HN C ++HRD+K NIL++ + + KL DFG +
Sbjct: 166 VLEAVRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 218
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 122 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 176
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 273
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 26/223 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQV-AVKM--LSSSSVQGYKQFQAEVELLIRAHHKNLTILVG 623
+ +G GG V+ + KQ+ A+K L + Q ++ E+ L + + I+
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 624 YCDEGANMGLIYEFMANGNLQAH-LLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
Y E + IY M GN+ + L+ K WER+ S LE +H + I
Sbjct: 122 YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQHGI 176
Query: 683 VHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLTE 742
VH D+K AN L+ + KL DFG++ Y+ PE +
Sbjct: 177 VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 743 KS-----------DVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774
++ DV+S G +L + G KTP + +I Q
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYG-----KTPFQQIINQ 273
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 42/215 (19%)
Query: 568 VLGKGGFGTVYHGYL--DDKQVAVKMLSSSSVQGYKQF------QAEVELL--IRAHHKN 617
+LG GGFG+VY G D+ VA+K + + + + EV LL + +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 618 LTILVGYCDEGANMGLIYE-----------FMANGNLQAHLLEDKADTLCWERRLQIASE 666
+ L+ + + + LI E G LQ E+ A + W
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFW--------- 117
Query: 667 SAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPXXXXXXXXXXXXX 725
Q LE + + ++HRD+K NIL++ + + KL DFG +
Sbjct: 118 --QVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDG 171
Query: 726 XXXYLDPEYYISNRLTEKS-DVYSFGVVLLELITG 759
Y PE+ +R +S V+S G++L +++ G
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 534 RRRKQAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTVYHGY--LDDKQVAVKM 591
R++ + K S+ + + D +I + ++G G +G V Y L+ + VA+K
Sbjct: 30 RKQHHSSKPTASMPRPHSDWQIPDRYEIRH----LIGTGSYGHVCEAYDKLEKRVVAIKK 85
Query: 592 LSS--SSVQGYKQFQAEVELLIRAHH----KNLTILVGYCDEGANMGLIYEFMANGNLQ- 644
+ + K+ E+ +L R +H K L I++ E + + +A+ + +
Sbjct: 86 ILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK 145
Query: 645 -----AHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ 699
+L E TL + + G++Y+H+ I+HRD+K AN L+N+
Sbjct: 146 LFRTPVYLTELHIKTLLYNLLV--------GVKYVHSAG---ILHRDLKPANCLVNQDCS 194
Query: 700 AKLADFGLSR 709
K+ DFGL+R
Sbjct: 195 VKVCDFGLAR 204
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN------- 617
R LG G F TV+ +++ VA+K++ V + + E++LL R + +
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNTKEDSM 83
Query: 618 -----LTILVGYCDEGAN---MGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASES 667
L +L + +G N + +++E + NL A + E + L + + QI+ +
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVK--QISKQL 140
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILL------NEKFQAKLADFGLSRIFPXXXXXXXXX 721
GL+Y+H C I+H D+K N+L+ Q K+AD G + +
Sbjct: 141 LLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY-----DEHYT 193
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y PE + +D++S ++ ELITG
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 36/218 (16%)
Query: 567 RVLGKGGFGTVY--HGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN------- 617
R LG G F TV+ +++ VA+K++ V + + E++LL R + +
Sbjct: 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT-EAAEDEIKLLQRVNDADNTKEDSM 83
Query: 618 -----LTILVGYCDEGAN---MGLIYEFMANGNLQAHL--LEDKADTLCWERRLQIASES 667
L +L + +G N + +++E + NL A + E + L + + QI+ +
Sbjct: 84 GANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVK--QISKQL 140
Query: 668 AQGLEYLHNGCKPPIVHRDVKSANILL------NEKFQAKLADFGLSRIFPXXXXXXXXX 721
GL+Y+H C I+H D+K N+L+ Q K+AD G + +
Sbjct: 141 LLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY-----DEHYT 193
Query: 722 XXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITG 759
Y PE + +D++S ++ ELITG
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 26/236 (11%)
Query: 533 LRRRKQAGKKKGSLELENRKFSYFDVLKITNNFERVLGKGGFGTV--YHGYLDDKQVAVK 590
L R ++ KK L++ K +DV+K V+G+G FG V K A+K
Sbjct: 57 LNRYEKIVKKIRGLQM---KAEDYDVVK-------VIGRGAFGEVQLVRHKASQKVYAMK 106
Query: 591 MLSSSSVQGYKQ---FQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQAHL 647
+LS + F E +++ A+ + L + + ++ E+M G+L +L
Sbjct: 107 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL-VNL 165
Query: 648 LEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL 707
+ + W + +E L+ +H+ ++HRDVK N+LL++ KLADFG
Sbjct: 166 MSNYDVPEKWAKFY--TAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGT 220
Query: 708 SRIFPXXXXXXXXXXXXXXXXYLDPEYYIS----NRLTEKSDVYSFGVVLLELITG 759
Y+ PE S + D +S GV L E++ G
Sbjct: 221 CMKM-DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 21/212 (9%)
Query: 566 ERVLGKGGFGTVYH--GYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILV 622
E VLG+G V + ++ AVK++ + EVE+L + H+N+ L+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 623 GYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPI 682
+ +E L++E M G++ +H+ K + + A L++LHN I
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHN---KGI 132
Query: 683 VHRDVKSANILL---NEKFQAKLADFGLSRIFPXXXXXX-----XXXXXXXXXXYLDPEY 734
HRD+K NIL N+ K+ DF L Y+ PE
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 735 Y-----ISNRLTEKSDVYSFGVVLLELITGQP 761
++ ++ D++S GV+L L++G P
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYP 224
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQA-EVELLIRAHHK-----NLTI 620
R LG G F TV+ + + V M S + Y + E+ LL + N +
Sbjct: 27 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 86
Query: 621 LVGYCDE-------GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
+V D+ G ++ +++E + + +L +++ L +I + QGL+Y
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 145
Query: 674 LHNGCKPPIVHRDVKSANILL--NEKFQAKLA 703
LH C+ I+H D+K NILL NE++ +LA
Sbjct: 146 LHTKCR--IIHTDIKPENILLSVNEQYIRRLA 175
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 18/152 (11%)
Query: 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQA-EVELLIRAHHK-----NLTI 620
R LG G F TV+ + + V M S + Y + E+ LL + N +
Sbjct: 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM 102
Query: 621 LVGYCDE-------GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEY 673
+V D+ G ++ +++E + + +L +++ L +I + QGL+Y
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 161
Query: 674 LHNGCKPPIVHRDVKSANILL--NEKFQAKLA 703
LH C+ I+H D+K NILL NE++ +LA
Sbjct: 162 LHTKCR--IIHTDIKPENILLSVNEQYIRRLA 191
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 48/181 (26%)
Query: 559 LKITNNFER--VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH 614
L+ ++FE VLG+G FG V LD + A+K + + + +EV LL +
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLN 60
Query: 615 HK--------------------------NLTILVGYCDEGANMGLIYEFMANGNLQAHLL 648
H+ L I YC+ +Y+ + + NL
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRT----LYDLIHSENLNQQRD 116
Query: 649 EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708
E W QI + L Y+H+ I+HR++K NI ++E K+ DFGL+
Sbjct: 117 E------YWRLFRQIL----EALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Query: 709 R 709
+
Sbjct: 164 K 164
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 35/220 (15%)
Query: 566 ERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVEL---LIRAHHKNLTILV 622
ER+ G+G FGTV G +K + + +Q + E+++ L HH N+ L
Sbjct: 28 ERMAGQGTFGTVQLG--KEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQ 85
Query: 623 GYCDEGANMGLIYEFMANGNLQAHL---LEDKADTL--CWER--RLQIASESAQGLEYLH 675
Y Y +L +E DTL C R Q+A +L
Sbjct: 86 SY---------FYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 676 N-----GC----KPPIVHRDVKSANILLNEK-FQAKLADFGLSRIFPXXXXXXXXXXXXX 725
GC + HRD+K N+L+NE KL DFG ++
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK---KLSPSEPNVAYIC 193
Query: 726 XXXYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQ 764
Y PE N+ T D++S G + E++ G+P+ +
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 569 LGKGGFGTVYHGY--LDDKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAHHKNL 618
LG G FG V+ +K+V VK + V + E+ +L R H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 619 TILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC 678
++ + L+ E +G L D+ L I + + YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR--- 147
Query: 679 KPPIVHRDVKSANILLNEKFQAKLADFG 706
I+HRD+K NI++ E F KL DFG
Sbjct: 148 LKDIIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 40/305 (13%)
Query: 567 RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V K A+K+LS + F E +++ A+ + L
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
+ + ++ E+M G+L +L+ + W R +E L+ +H+
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFY--TAEVVLALDAIHS---MG 188
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS---- 737
+HRDVK N+LL++ KLADFG + Y+ PE S
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 247
Query: 738 NRLTEKSDVYSFGVVLLELITGQPVIQKTP--QRTLIGQWVSSMLARGDIKNIVDHRLQG 795
+ D +S GV L E++ G TP +L+G + I++H+
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGD-----TPFYADSLVGTY----------SKIMNHKNSL 292
Query: 796 DF-DTNTVWKAVEIALACIHTISTRRPTMNQV------VIELNDCLAMEIARTKAHETAP 848
F D N + K + + T R N V + ND A E R P
Sbjct: 293 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 352
Query: 849 DGTPD 853
D + D
Sbjct: 353 DLSSD 357
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 40/305 (13%)
Query: 567 RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V K A+K+LS + F E +++ A+ + L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
+ + ++ E+M G+L +L+ + W R +E L+ +H+
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFY--TAEVVLALDAIHS---MG 193
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS---- 737
+HRDVK N+LL++ KLADFG + Y+ PE S
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 738 NRLTEKSDVYSFGVVLLELITGQPVIQKTP--QRTLIGQWVSSMLARGDIKNIVDHRLQG 795
+ D +S GV L E++ G TP +L+G + I++H+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGD-----TPFYADSLVGTY----------SKIMNHKNSL 297
Query: 796 DF-DTNTVWKAVEIALACIHTISTRRPTMNQV------VIELNDCLAMEIARTKAHETAP 848
F D N + K + + T R N V + ND A E R P
Sbjct: 298 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
Query: 849 DGTPD 853
D + D
Sbjct: 358 DLSSD 362
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 117/305 (38%), Gaps = 40/305 (13%)
Query: 567 RVLGKGGFGTV--YHGYLDDKQVAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V K A+K+LS + F E +++ A+ + L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 622 VGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP 681
+ + ++ E+M G+L +L+ + W R +E L+ +H+
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDL-VNLMSNYDVPEKWARFY--TAEVVLALDAIHS---MG 193
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYIS---- 737
+HRDVK N+LL++ KLADFG + Y+ PE S
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD 252
Query: 738 NRLTEKSDVYSFGVVLLELITGQPVIQKTP--QRTLIGQWVSSMLARGDIKNIVDHRLQG 795
+ D +S GV L E++ G TP +L+G + I++H+
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGD-----TPFYADSLVGTY----------SKIMNHKNSL 297
Query: 796 DF-DTNTVWKAVEIALACIHTISTRRPTMNQV------VIELNDCLAMEIARTKAHETAP 848
F D N + K + + T R N V + ND A E R P
Sbjct: 298 TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
Query: 849 DGTPD 853
D + D
Sbjct: 358 DLSSD 362
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 9/201 (4%)
Query: 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTIL 621
NF L + G ++ G + VK+L S + + F E L H N+ +
Sbjct: 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72
Query: 622 VGYCDE--GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+G C + LI + G+L L E + + ++ A + A+G +LH +
Sbjct: 73 LGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT-LE 131
Query: 680 PPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNR 739
P I + S ++ ++E A+++ + F PE +NR
Sbjct: 132 PLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPED--TNR 189
Query: 740 LTEKSDVYSFGVVLLELITGQ 760
+ +D +SF V+L EL+T +
Sbjct: 190 RS--ADXWSFAVLLWELVTRE 208
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 47/225 (20%)
Query: 548 LENRKFSYFDVLKITNNFERVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA 605
L+ +K + D K+T+ +VLG G G V + Q A+KML Q + +
Sbjct: 8 LQIKKNAIIDDYKVTS---QVLGLGINGKVLQIFNKRTQEKFALKML-----QDCPKARR 59
Query: 606 EVELLIRAHHKNLTILVGYCDEGANMG-----LIYEFMANGNLQAHLLEDKADTLCWERR 660
EVEL RA + + E G ++ E + G L + + +D+ D ER
Sbjct: 60 EVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTERE 118
Query: 661 L-QIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPXXXX 716
+I + ++YLH+ I HRDVK N+L K KL DFG ++
Sbjct: 119 ASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------- 168
Query: 717 XXXXXXXXXXXXYLDPEYYISNRLTEKSDVYSFGVVLLELITGQP 761
+ + D++S GV++ L+ G P
Sbjct: 169 -----------------ETTGEKYDKSCDMWSLGVIMYILLCGYP 196
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 568 VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTILVG 623
++GKG FG V Y ++ + VA+K++ + Q Q EV LL + H + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 624 YCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+ ++ L++E M + NL L + + A + L +L +
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-E 177
Query: 680 PPIVHRDVKSANILL-NEKFQA-KLADFGLS-----RIFPXXXXXXXXXXXXXXXXYLDP 732
I+H D+K NILL N K A K+ DFG S RI+ Y P
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY----------QXIQSRFYRSP 227
Query: 733 EYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
E + D++S G +L+E+ TG+P+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 568 VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTILVG 623
++GKG FG V Y ++ + VA+K++ + Q Q EV LL + H + +
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTEMKYYIV 100
Query: 624 YCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+ ++ L++E M + NL L + + A + L +L +
Sbjct: 101 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-E 158
Query: 680 PPIVHRDVKSANILL-NEKFQA-KLADFGLS-----RIFPXXXXXXXXXXXXXXXXYLDP 732
I+H D+K NILL N K A K+ DFG S RI+ Y P
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY----------QXIQSRFYRSP 208
Query: 733 EYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
E + D++S G +L+E+ TG+P+
Sbjct: 209 EVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 239
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V + + + A+K+L+ + + F+ E ++L+ + +T L
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 622 VGYCDEGANMGLIYEFMANGNL-------QAHLLEDKADTLCWERRLQIASESAQGLEYL 674
+ ++ L+ ++ G+L + L ED A E + +A +S L Y
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE--MVLAIDSIHQLHY- 196
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
VHRD+K N+LL+ +LADFG S + Y+ PE
Sbjct: 197 --------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 735 YIS-----NRLTEKSDVYSFGVVLLELITGQ 760
+ + + D +S GV + E++ G+
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 568 VLGKGGFGTVYHGY--LDDKQVAVKMLSSSSVQGYKQFQAEVELL--IRAHHKNLTILVG 623
++GKG FG V Y ++ + VA+K++ + Q Q EV LL + H + +
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMNKHDTEMKYYIV 119
Query: 624 YCDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK 679
+ ++ L++E M + NL L + + A + L +L +
Sbjct: 120 HLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-E 177
Query: 680 PPIVHRDVKSANILL-NEKFQA-KLADFGLS-----RIFPXXXXXXXXXXXXXXXXYLDP 732
I+H D+K NILL N K A K+ DFG S RI+ Y P
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIY----------QXIQSRFYRSP 227
Query: 733 EYYISNRLTEKSDVYSFGVVLLELITGQPVI 763
E + D++S G +L+E+ TG+P+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGEPLF 258
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 29/211 (13%)
Query: 567 RVLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQ---FQAEVELLIRAHHKNLTIL 621
+V+G+G FG V + + + A+K+L+ + + F+ E ++L+ + +T L
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 622 VGYCDEGANMGLIYEFMANGNL-------QAHLLEDKADTLCWERRLQIASESAQGLEYL 674
+ ++ L+ ++ G+L + L ED A E L I +S L Y
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI--DSIHQLHY- 212
Query: 675 HNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEY 734
VHRD+K N+LL+ +LADFG S + Y+ PE
Sbjct: 213 --------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 735 YIS-----NRLTEKSDVYSFGVVLLELITGQ 760
+ + + D +S GV + E++ G+
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 682 IVHRDVKSANILLNEKFQAKLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYISNRLT 741
+VH DVK ANI L + + KL DFGL Y+ PE +
Sbjct: 178 LVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAGAGEVQEGDPRYMAPE-LLQGSYG 233
Query: 742 EKSDVYSFGVVLLEL 756
+DV+S G+ +LE+
Sbjct: 234 TAADVFSLGLTILEV 248
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 85/211 (40%), Gaps = 26/211 (12%)
Query: 568 VLGKGGFGTVYHGYLDDKQ--VAVKMLSSSSVQGYKQFQA-EVELLIRAHHKNLTILVGY 624
+LG+G V+ G A+K+ ++ S Q E E+L + +HKN+ L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 625 CDEGANMG--LIYEFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYL-HNGCKP 680
+E LI EF G+L L E A L L + + G+ +L NG
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG--- 132
Query: 681 PIVHRDVKSANIL--LNEKFQA--KLADFGLSRIFPXXXXXXXXXXXXXXXXYLDPEYYI 736
IVHR++K NI+ + E Q+ KL DFG +R YL P+ Y
Sbjct: 133 -IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQFVSLYGTEEYLHPDMYE 188
Query: 737 SNRLTEKS--------DVYSFGVVLLELITG 759
L + D++S GV TG
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,810,525
Number of Sequences: 62578
Number of extensions: 938692
Number of successful extensions: 4784
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 2257
Number of HSP's gapped (non-prelim): 1205
length of query: 870
length of database: 14,973,337
effective HSP length: 107
effective length of query: 763
effective length of database: 8,277,491
effective search space: 6315725633
effective search space used: 6315725633
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)