Query 002887
Match_columns 870
No_of_seqs 630 out of 3800
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:27:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 7.5E-51 2.6E-55 448.2 22.9 255 564-835 44-319 (329)
2 4gt4_A Tyrosine-protein kinase 100.0 1.7E-51 5.9E-56 449.2 17.2 256 561-833 26-304 (308)
3 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-51 7.8E-56 446.3 17.9 254 564-834 16-288 (299)
4 3omv_A RAF proto-oncogene seri 100.0 3E-50 1E-54 438.0 22.5 255 564-833 39-298 (307)
5 4ase_A Vascular endothelial gr 100.0 3.5E-48 1.2E-52 430.5 21.1 258 563-836 66-348 (353)
6 3hmm_A TGF-beta receptor type- 100.0 2.8E-48 9.5E-53 424.0 19.8 264 564-836 6-298 (303)
7 4b9d_A Serine/threonine-protei 100.0 2.4E-48 8.1E-53 429.2 18.1 247 563-828 26-276 (350)
8 4fih_A Serine/threonine-protei 100.0 1.2E-47 4.1E-52 422.9 21.0 245 564-828 77-323 (346)
9 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-47 6.4E-52 420.1 20.9 250 565-836 62-317 (336)
10 3fpq_A Serine/threonine-protei 100.0 3E-47 1E-51 411.3 20.6 245 564-828 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-47 4.2E-52 416.8 16.3 245 563-827 34-283 (311)
12 4fie_A Serine/threonine-protei 100.0 1.7E-46 5.7E-51 423.8 22.0 245 564-828 154-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 4.3E-46 1.5E-50 398.9 20.0 242 563-828 15-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.6E-46 9E-51 406.0 12.6 239 563-823 26-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.2E-44 7.4E-49 391.9 17.7 247 563-828 7-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 3.9E-42 1.3E-46 378.2 23.6 268 566-836 44-316 (321)
17 4b99_A Mitogen-activated prote 100.0 7.3E-42 2.5E-46 386.0 23.0 259 563-828 56-344 (398)
18 3uim_A Brassinosteroid insensi 100.0 2.4E-42 8E-47 380.4 17.8 282 551-833 18-309 (326)
19 4f9c_A Cell division cycle 7-r 100.0 1.9E-41 6.6E-46 378.4 21.6 256 563-828 23-352 (361)
20 2nru_A Interleukin-1 receptor- 100.0 1.3E-40 4.4E-45 363.2 27.4 280 550-834 12-305 (307)
21 3uto_A Twitchin; kinase, muscl 100.0 2.2E-41 7.7E-46 400.0 20.6 248 563-828 159-410 (573)
22 3p86_A Serine/threonine-protei 100.0 2.8E-40 9.6E-45 362.0 22.0 256 564-837 40-300 (309)
23 2psq_A Fibroblast growth facto 100.0 6.9E-40 2.3E-44 368.1 23.4 257 564-837 84-366 (370)
24 3v5w_A G-protein coupled recep 100.0 3.2E-40 1.1E-44 388.7 20.5 244 564-828 192-449 (689)
25 3s95_A LIMK-1, LIM domain kina 100.0 9.8E-40 3.3E-44 357.0 21.4 257 564-836 13-283 (310)
26 3soc_A Activin receptor type-2 100.0 7E-40 2.4E-44 360.7 19.1 264 564-836 27-319 (322)
27 3fxz_A Serine/threonine-protei 100.0 2.2E-39 7.7E-44 352.6 21.7 245 564-828 23-269 (297)
28 2c30_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 354.1 22.8 261 548-828 20-294 (321)
29 3vhe_A Vascular endothelial gr 100.0 3E-39 1E-43 360.3 21.4 258 563-836 24-356 (359)
30 3kul_A Ephrin type-A receptor 100.0 2.4E-39 8.2E-44 357.1 20.3 255 564-836 52-314 (325)
31 3tt0_A Basic fibroblast growth 100.0 3.1E-39 1E-43 364.4 21.4 259 563-838 71-355 (382)
32 1k9a_A Carboxyl-terminal SRC k 100.0 4.3E-39 1.5E-43 371.1 23.1 250 564-837 196-447 (450)
33 3q4u_A Activin receptor type-1 100.0 4.9E-39 1.7E-43 349.2 21.4 257 564-833 11-300 (301)
34 3l9p_A Anaplastic lymphoma kin 100.0 1.6E-39 5.5E-44 364.7 18.1 257 564-837 74-347 (367)
35 3poz_A Epidermal growth factor 100.0 3.7E-39 1.3E-43 355.7 19.7 254 564-836 18-279 (327)
36 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-39 4.5E-44 366.7 16.2 254 564-835 117-374 (377)
37 3fe3_A MAP/microtubule affinit 100.0 5.7E-39 1.9E-43 354.6 21.0 243 564-829 18-265 (328)
38 3lb7_A RAF proto-oncogene seri 100.0 1.4E-38 4.9E-43 348.0 23.6 257 563-834 38-299 (307)
39 3ugc_A Tyrosine-protein kinase 100.0 5.4E-39 1.8E-43 348.5 20.1 260 563-835 12-291 (295)
40 1t46_A HOMO sapiens V-KIT hard 100.0 1E-38 3.5E-43 348.6 22.3 258 563-836 25-308 (313)
41 4hcu_A Tyrosine-protein kinase 100.0 5.4E-39 1.8E-43 343.6 19.6 252 564-835 13-266 (269)
42 2qol_A Ephrin receptor; recept 100.0 3E-39 1E-43 363.2 18.3 255 564-836 48-310 (373)
43 1luf_A Muscle-specific tyrosin 100.0 2.8E-39 9.7E-44 358.0 17.6 255 564-835 50-335 (343)
44 3dtc_A Mitogen-activated prote 100.0 7.2E-39 2.5E-43 342.6 20.1 250 564-833 10-271 (271)
45 4euu_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 345.4 26.6 266 564-835 12-309 (319)
46 3zgw_A Maternal embryonic leuc 100.0 5.2E-39 1.8E-43 357.5 19.1 245 564-829 13-261 (347)
47 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.6E-39 2.9E-43 341.7 19.9 254 563-836 10-265 (268)
48 1rjb_A FL cytokine receptor; k 100.0 8.6E-39 3E-43 354.7 20.4 258 563-836 47-335 (344)
49 3gen_A Tyrosine-protein kinase 100.0 1E-38 3.4E-43 344.0 20.2 254 564-837 27-282 (283)
50 1opk_A P150, C-ABL, proto-onco 100.0 4.6E-39 1.6E-43 375.3 18.8 253 563-834 222-477 (495)
51 3tki_A Serine/threonine-protei 100.0 4.3E-39 1.5E-43 354.8 17.4 248 564-829 10-262 (323)
52 1qcf_A Haematopoetic cell kina 100.0 3.3E-39 1.1E-43 372.6 17.0 251 564-834 191-443 (454)
53 2ivs_A Proto-oncogene tyrosine 100.0 1E-38 3.6E-43 348.7 20.2 255 564-835 26-311 (314)
54 3kfa_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 345.9 17.9 256 563-837 15-273 (288)
55 3qup_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 352.3 18.1 257 563-836 25-299 (323)
56 3kmu_A ILK, integrin-linked ki 100.0 8.7E-39 3E-43 341.3 18.4 248 564-834 13-269 (271)
57 4eqm_A Protein kinase; transfe 100.0 7E-39 2.4E-43 348.1 17.8 256 564-835 14-275 (294)
58 3kex_A Receptor tyrosine-prote 100.0 7.3E-39 2.5E-43 353.0 18.0 255 564-837 16-278 (325)
59 1o6l_A RAC-beta serine/threoni 100.0 2.8E-38 9.6E-43 350.3 21.7 243 564-828 8-260 (337)
60 1mp8_A Focal adhesion kinase 1 100.0 1.8E-38 6.2E-43 342.0 19.6 256 563-838 17-279 (281)
61 2i1m_A Macrophage colony-stimu 100.0 2E-38 7E-43 350.0 20.3 257 564-836 49-327 (333)
62 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 9.1E-39 3.1E-43 368.6 17.7 251 564-834 187-439 (452)
63 3og7_A AKAP9-BRAF fusion prote 100.0 2.4E-38 8.1E-43 342.6 19.9 257 563-834 26-287 (289)
64 1p4o_A Insulin-like growth fac 100.0 1.4E-38 4.6E-43 349.6 17.5 259 563-838 27-302 (322)
65 4fvq_A Tyrosine-protein kinase 100.0 1.3E-38 4.5E-43 344.0 16.7 251 563-839 10-279 (289)
66 2pvf_A Fibroblast growth facto 100.0 3.7E-38 1.3E-42 348.6 20.3 258 563-837 37-320 (334)
67 1qpc_A LCK kinase; alpha beta 100.0 5.3E-38 1.8E-42 337.6 21.0 254 563-836 15-270 (279)
68 2y0a_A Death-associated protei 100.0 5.1E-38 1.7E-42 346.6 21.3 248 562-828 12-271 (326)
69 2xir_A Vascular endothelial gr 100.0 5.9E-38 2E-42 343.1 21.4 258 563-836 29-311 (316)
70 3lxl_A Tyrosine-protein kinase 100.0 8.6E-39 2.9E-43 352.4 14.8 266 563-837 25-305 (327)
71 2x4f_A Myosin light chain kina 100.0 4.1E-38 1.4E-42 354.0 20.5 250 566-833 94-349 (373)
72 2yab_A Death-associated protei 100.0 2.9E-38 9.9E-43 353.5 19.1 247 563-828 14-272 (361)
73 2zv2_A Calcium/calmodulin-depe 100.0 7E-38 2.4E-42 340.3 20.9 244 564-828 16-292 (298)
74 1byg_A CSK, protein (C-termina 100.0 3.5E-38 1.2E-42 339.0 18.3 250 564-837 24-275 (278)
75 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.7E-38 9.3E-43 352.7 18.0 243 564-828 26-280 (353)
76 2eva_A TAK1 kinase - TAB1 chim 100.0 7.2E-38 2.5E-42 342.3 20.8 252 564-836 11-264 (307)
77 2izr_A Casein kinase I isoform 100.0 1.2E-37 4.2E-42 343.7 22.9 258 564-836 12-282 (330)
78 1b6c_B TGF-B superfamily recep 100.0 1.5E-37 5.1E-42 344.1 23.6 266 558-837 39-338 (342)
79 3niz_A Rhodanese family protei 100.0 7.9E-38 2.7E-42 342.7 21.1 258 564-828 24-300 (311)
80 3mdy_A Bone morphogenetic prot 100.0 1.9E-37 6.4E-42 342.3 24.3 264 562-835 38-331 (337)
81 3soa_A Calcium/calmodulin-depe 100.0 1.4E-37 4.6E-42 357.3 24.0 248 563-828 13-267 (444)
82 3cc6_A Protein tyrosine kinase 100.0 7.2E-38 2.5E-42 337.1 20.3 256 564-839 15-277 (281)
83 3lxp_A Non-receptor tyrosine-p 100.0 2E-38 6.9E-43 348.3 16.2 268 564-837 34-312 (318)
84 2bdw_A Hypothetical protein K1 100.0 1E-37 3.5E-42 349.4 22.2 248 562-828 30-284 (362)
85 3op5_A Serine/threonine-protei 100.0 5.3E-38 1.8E-42 351.8 19.8 265 563-836 37-330 (364)
86 1tki_A Titin; serine kinase, m 100.0 3.5E-38 1.2E-42 347.2 18.0 246 564-828 8-257 (321)
87 3t9t_A Tyrosine-protein kinase 100.0 6E-38 2.1E-42 334.5 19.0 252 564-835 11-264 (267)
88 4aw2_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 360.6 18.6 249 565-828 78-338 (437)
89 4f0f_A Serine/threonine-protei 100.0 9E-38 3.1E-42 337.2 20.2 248 564-833 22-287 (287)
90 1u59_A Tyrosine-protein kinase 100.0 2.4E-37 8.2E-42 334.2 23.3 257 567-842 16-279 (287)
91 3lzb_A Epidermal growth factor 100.0 5.3E-38 1.8E-42 346.6 18.5 254 564-836 18-279 (327)
92 1csn_A Casein kinase-1; phosph 100.0 9.8E-38 3.4E-42 338.4 20.2 256 564-835 13-283 (298)
93 4dc2_A Protein kinase C IOTA t 100.0 2.5E-37 8.5E-42 349.6 23.9 243 564-823 55-307 (396)
94 3gni_B Strad alpha; kinase fol 100.0 1.1E-37 3.9E-42 352.2 21.0 264 563-829 27-334 (389)
95 1mqb_A Ephrin type-A receptor 100.0 1.8E-37 6E-42 343.3 22.0 254 565-836 48-310 (333)
96 2h8h_A Proto-oncogene tyrosine 100.0 3.3E-38 1.1E-42 371.4 17.1 252 563-834 269-522 (535)
97 1kob_A Twitchin; kinase, intra 100.0 1.1E-37 3.9E-42 351.9 20.5 248 563-828 53-304 (387)
98 3c0i_A Peripheral plasma membr 100.0 9.2E-38 3.1E-42 348.2 19.4 250 562-828 25-286 (351)
99 4eut_A Serine/threonine-protei 100.0 2E-37 7E-42 351.2 22.3 268 564-837 12-311 (396)
100 3dbq_A Dual specificity protei 100.0 1.7E-37 5.9E-42 344.7 21.0 247 564-829 12-274 (343)
101 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-37 5.2E-42 341.7 20.0 240 564-828 9-258 (318)
102 4e5w_A Tyrosine-protein kinase 100.0 3.4E-38 1.2E-42 342.9 14.6 258 563-834 23-301 (302)
103 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-37 1.2E-41 338.4 22.7 259 564-828 8-293 (317)
104 3v8s_A RHO-associated protein 100.0 7.9E-38 2.7E-42 355.5 17.9 247 565-829 73-330 (410)
105 3pls_A Macrophage-stimulating 100.0 2.7E-37 9.3E-42 334.9 21.0 255 565-836 25-288 (298)
106 3hko_A Calcium/calmodulin-depe 100.0 2.4E-37 8.1E-42 343.0 21.0 252 563-828 28-330 (345)
107 1xjd_A Protein kinase C, theta 100.0 7.8E-38 2.7E-42 347.8 17.1 242 564-827 20-268 (345)
108 3g33_A Cell division protein k 100.0 2.6E-37 9E-42 337.4 21.0 260 562-828 10-296 (308)
109 3o0g_A Cell division protein k 100.0 3.1E-37 1.1E-41 334.3 21.4 258 564-828 5-282 (292)
110 3brb_A Proto-oncogene tyrosine 100.0 8.2E-38 2.8E-42 342.1 16.8 256 563-835 36-308 (313)
111 1ob3_A PFPK5, cell division co 100.0 2.4E-37 8.1E-42 334.6 20.2 258 564-828 5-280 (288)
112 3a62_A Ribosomal protein S6 ki 100.0 2.8E-37 9.6E-42 340.8 20.8 244 563-828 19-276 (327)
113 2yfx_A Tyrosine-protein kinase 100.0 1.3E-37 4.4E-42 343.0 18.1 257 563-836 32-305 (327)
114 3a8x_A Protein kinase C IOTA t 100.0 5.6E-37 1.9E-41 341.1 23.3 243 564-823 12-264 (345)
115 1xbb_A Tyrosine-protein kinase 100.0 3.1E-37 1.1E-41 334.1 20.7 257 565-841 20-285 (291)
116 3f66_A Hepatocyte growth facto 100.0 1.8E-37 6.1E-42 336.8 18.9 254 564-835 28-291 (298)
117 2zmd_A Dual specificity protei 100.0 3.5E-37 1.2E-41 348.6 21.8 248 563-829 58-321 (390)
118 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-37 8.8E-42 344.3 20.2 245 564-828 56-305 (349)
119 3f3z_A Calcium/calmodulin-depe 100.0 6E-37 2E-41 329.0 22.3 246 563-828 11-261 (277)
120 2wqm_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 335.6 21.7 260 563-838 34-300 (310)
121 2i0e_A Protein kinase C-beta I 100.0 2.3E-37 7.9E-42 345.1 19.6 243 564-828 23-276 (353)
122 3lm5_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 339.0 21.7 261 551-828 18-287 (327)
123 3p1a_A MYT1 kinase, membrane-a 100.0 2E-37 6.9E-42 339.3 18.7 245 559-828 55-304 (311)
124 2ozo_A Tyrosine-protein kinase 100.0 3.4E-37 1.1E-41 368.3 22.1 250 568-836 343-599 (613)
125 2v62_A Serine/threonine-protei 100.0 3.5E-37 1.2E-41 342.5 20.7 261 563-833 39-326 (345)
126 3g2f_A Bone morphogenetic prot 100.0 1.5E-37 5.2E-42 343.3 17.6 262 564-836 16-319 (336)
127 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-37 7.6E-42 342.9 18.9 242 564-829 12-259 (336)
128 3uc3_A Serine/threonine-protei 100.0 3.6E-37 1.2E-41 344.8 20.7 249 563-829 22-275 (361)
129 2jii_A Serine/threonine-protei 100.0 4.3E-37 1.5E-41 342.6 21.2 259 564-836 45-337 (352)
130 3kk8_A Calcium/calmodulin depe 100.0 5.9E-37 2E-41 330.1 21.5 247 564-829 9-262 (284)
131 1nxk_A MAP kinase-activated pr 100.0 4.2E-37 1.4E-41 349.1 21.3 245 567-829 68-322 (400)
132 2a19_B Interferon-induced, dou 100.0 4.3E-37 1.5E-41 330.7 20.3 246 560-834 10-273 (284)
133 3gxj_A TGF-beta receptor type- 100.0 1.2E-39 4.1E-44 354.1 0.3 257 563-837 5-299 (303)
134 4fl3_A Tyrosine-protein kinase 100.0 2.7E-37 9.4E-42 370.1 20.6 249 567-835 375-631 (635)
135 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.4E-37 8.1E-42 344.7 18.6 240 564-828 44-293 (350)
136 2eue_A Carbon catabolite derep 100.0 3.4E-37 1.2E-41 330.8 18.8 241 564-828 16-262 (275)
137 2acx_A G protein-coupled recep 100.0 4.3E-37 1.5E-41 361.0 21.2 248 564-828 187-444 (576)
138 3ork_A Serine/threonine protei 100.0 5.9E-38 2E-42 343.4 13.0 255 563-833 14-279 (311)
139 3c1x_A Hepatocyte growth facto 100.0 1.4E-37 4.7E-42 349.7 16.1 254 564-835 92-355 (373)
140 3qd2_B Eukaryotic translation 100.0 5.6E-37 1.9E-41 337.3 20.6 246 564-828 9-325 (332)
141 2a2a_A Death-associated protei 100.0 5.4E-37 1.9E-41 337.3 20.4 248 562-828 13-272 (321)
142 3ll6_A Cyclin G-associated kin 100.0 4.1E-37 1.4E-41 339.1 19.4 252 563-835 30-308 (337)
143 2yex_A Serine/threonine-protei 100.0 8.7E-37 3E-41 327.2 21.2 248 563-828 9-261 (276)
144 4fr4_A YANK1, serine/threonine 100.0 7.2E-37 2.5E-41 344.6 21.6 245 564-828 18-271 (384)
145 1u5q_A Serine/threonine protei 100.0 7.5E-37 2.6E-41 340.5 21.3 242 564-829 57-306 (348)
146 4ejn_A RAC-alpha serine/threon 100.0 1.5E-37 5.3E-42 357.8 16.2 243 564-828 151-404 (446)
147 3kn6_A Ribosomal protein S6 ki 100.0 3.5E-37 1.2E-41 339.8 18.4 245 567-828 17-270 (325)
148 2w1i_A JAK2; chromosomal rearr 100.0 6E-37 2.1E-41 337.7 20.2 259 564-835 44-322 (326)
149 1fvr_A Tyrosine-protein kinase 100.0 3.9E-37 1.3E-41 339.2 18.7 254 563-836 27-301 (327)
150 3llt_A Serine/threonine kinase 100.0 1.5E-36 5.1E-41 339.0 23.3 255 563-828 37-355 (360)
151 4agu_A Cyclin-dependent kinase 100.0 7.4E-37 2.5E-41 334.0 20.1 258 564-828 6-284 (311)
152 2vd5_A DMPK protein; serine/th 100.0 4.5E-37 1.5E-41 349.4 19.0 248 565-828 65-327 (412)
153 3oz6_A Mitogen-activated prote 100.0 3.2E-37 1.1E-41 348.4 17.4 259 563-829 11-329 (388)
154 3fdn_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 329.2 19.1 242 564-829 12-258 (279)
155 2jam_A Calcium/calmodulin-depe 100.0 1.1E-36 3.7E-41 332.0 20.9 247 562-828 10-261 (304)
156 1vzo_A Ribosomal protein S6 ki 100.0 4.6E-37 1.6E-41 343.1 18.3 251 563-830 56-323 (355)
157 2buj_A Serine/threonine-protei 100.0 4.8E-37 1.6E-41 336.4 18.1 255 564-834 32-305 (317)
158 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-36 7.7E-41 327.4 22.9 256 564-836 12-281 (296)
159 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1E-36 3.4E-41 341.4 20.8 248 564-836 68-340 (365)
160 3ttj_A Mitogen-activated prote 100.0 1.8E-36 6E-41 350.4 23.2 254 564-828 65-355 (464)
161 3bhy_A Death-associated protei 100.0 1E-36 3.4E-41 328.1 19.7 248 562-828 6-265 (283)
162 3is5_A Calcium-dependent prote 100.0 9.7E-37 3.3E-41 329.5 19.6 247 563-828 24-278 (285)
163 2ac3_A MAP kinase-interacting 100.0 2.2E-36 7.4E-41 331.1 22.6 251 567-828 19-295 (316)
164 2r5t_A Serine/threonine-protei 100.0 2.4E-37 8.3E-42 347.5 15.4 248 563-832 40-293 (373)
165 2w5a_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 331.7 15.1 249 564-831 9-270 (279)
166 2y94_A 5'-AMP-activated protei 100.0 7E-37 2.4E-41 353.9 19.4 242 564-828 19-266 (476)
167 2wtk_C Serine/threonine-protei 100.0 1E-36 3.5E-41 331.7 19.6 247 564-829 8-264 (305)
168 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-36 4.5E-41 356.0 21.6 244 565-824 189-439 (543)
169 4hgt_A Casein kinase I isoform 100.0 4.3E-36 1.5E-40 324.9 24.1 257 563-836 11-281 (296)
170 3cok_A Serine/threonine-protei 100.0 5E-37 1.7E-41 329.8 16.3 244 564-828 14-262 (278)
171 2rku_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 329.8 19.0 244 564-829 18-266 (294)
172 2h34_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 334.2 17.7 255 564-836 37-297 (309)
173 2clq_A Mitogen-activated prote 100.0 2.3E-36 7.7E-41 327.2 21.0 245 567-828 28-278 (295)
174 1t4h_A Serine/threonine-protei 100.0 2.2E-36 7.5E-41 327.1 20.4 243 564-828 29-282 (290)
175 3i6u_A CDS1, serine/threonine- 100.0 3.1E-36 1.1E-40 344.1 22.3 248 562-828 136-399 (419)
176 3a7i_A MST3 kinase, serine/thr 100.0 2E-36 6.7E-41 329.6 19.7 243 565-829 26-271 (303)
177 4aaa_A Cyclin-dependent kinase 100.0 7.7E-37 2.6E-41 337.5 16.7 258 564-828 28-306 (331)
178 3dls_A PAS domain-containing s 100.0 1.1E-36 3.8E-41 337.3 17.9 238 563-829 26-275 (335)
179 2owb_A Serine/threonine-protei 100.0 1.5E-36 5.2E-41 336.0 18.8 243 564-828 44-291 (335)
180 2qr7_A Ribosomal protein S6 ki 100.0 1.7E-36 5.7E-41 336.8 19.2 247 563-828 24-277 (342)
181 1u46_A ACK-1, activated CDC42 100.0 1E-36 3.5E-41 329.2 17.0 256 563-836 20-285 (291)
182 2vgo_A Serine/threonine-protei 100.0 2.2E-36 7.6E-41 326.0 19.1 241 564-828 17-262 (284)
183 3nsz_A CK II alpha, casein kin 100.0 4.5E-36 1.5E-40 330.7 21.7 251 564-828 39-319 (330)
184 1ua2_A CAK, cell division prot 100.0 3E-36 1E-40 335.1 20.5 260 563-829 12-292 (346)
185 1x8b_A WEE1HU, WEE1-like prote 100.0 3.4E-36 1.2E-40 323.7 19.5 240 563-828 13-279 (289)
186 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-36 6.4E-41 334.3 17.7 257 564-828 37-318 (329)
187 3kvw_A DYRK2, dual specificity 100.0 2.8E-36 9.6E-41 345.4 19.6 256 563-828 99-408 (429)
188 3byv_A Rhoptry kinase; malaria 100.0 2.9E-37 1E-41 347.5 11.3 241 565-834 77-367 (377)
189 2r3i_A Cell division protein k 100.0 5.5E-36 1.9E-40 325.0 20.5 258 565-828 7-283 (299)
190 2h6d_A 5'-AMP-activated protei 100.0 3.7E-36 1.3E-40 322.5 18.9 243 564-829 14-262 (276)
191 2j7t_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41 328.7 16.9 247 564-828 22-275 (302)
192 3mwu_A Calmodulin-domain prote 100.0 5.2E-36 1.8E-40 348.8 21.1 248 562-829 23-277 (486)
193 3lij_A Calcium/calmodulin depe 100.0 5.1E-36 1.8E-40 349.6 20.9 246 563-828 39-291 (494)
194 3eb0_A Putative uncharacterize 100.0 2.9E-36 9.8E-41 340.1 18.0 255 563-828 9-321 (383)
195 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-36 7.2E-41 335.8 16.6 254 564-828 34-322 (348)
196 2ycf_A Serine/threonine-protei 100.0 1.9E-35 6.4E-40 325.0 24.0 249 561-828 10-274 (322)
197 3mtl_A Cell division protein k 100.0 1.3E-36 4.4E-41 334.9 14.6 258 564-828 5-281 (324)
198 2xrw_A Mitogen-activated prote 100.0 1.6E-35 5.5E-40 332.6 23.7 254 564-828 28-318 (371)
199 1phk_A Phosphorylase kinase; g 100.0 1.1E-35 3.6E-40 322.6 21.3 246 564-828 20-283 (298)
200 2y7j_A Phosphorylase B kinase 100.0 6.8E-36 2.3E-40 334.9 20.4 247 563-828 96-359 (365)
201 2x7f_A TRAF2 and NCK-interacti 100.0 7.5E-36 2.6E-40 328.3 20.3 245 565-828 28-286 (326)
202 3nyv_A Calmodulin-domain prote 100.0 2.8E-36 9.6E-41 350.8 17.8 247 562-828 27-281 (484)
203 1wak_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 335.6 22.1 256 563-828 39-391 (397)
204 3rp9_A Mitogen-activated prote 100.0 1.6E-35 5.5E-40 342.0 24.0 190 563-758 55-279 (458)
205 1z57_A Dual specificity protei 100.0 2E-35 6.9E-40 325.6 23.5 255 563-828 16-328 (339)
206 1j1b_A Glycogen synthase kinas 100.0 3.3E-36 1.1E-40 343.9 17.7 254 564-828 57-336 (420)
207 3eqc_A Dual specificity mitoge 100.0 2.5E-36 8.4E-41 337.4 16.3 257 564-828 36-324 (360)
208 2vwi_A Serine/threonine-protei 100.0 9.6E-37 3.3E-41 331.2 12.6 257 564-828 18-287 (303)
209 1cm8_A Phosphorylated MAP kina 100.0 5.7E-36 2E-40 335.8 19.0 252 564-828 28-307 (367)
210 1blx_A Cyclin-dependent kinase 100.0 1.6E-35 5.5E-40 325.4 21.8 258 564-828 14-296 (326)
211 2j0j_A Focal adhesion kinase 1 100.0 7.3E-36 2.5E-40 359.1 20.7 255 563-837 392-653 (656)
212 3sv0_A Casein kinase I-like; t 100.0 3.1E-35 1.1E-39 340.8 25.2 256 564-836 10-279 (483)
213 3q60_A ROP5B; pseudokinase, tr 100.0 2.8E-36 9.6E-41 338.6 15.9 249 564-828 65-352 (371)
214 3pfq_A PKC-B, PKC-beta, protei 100.0 5.4E-36 1.9E-40 361.3 19.0 243 564-828 344-597 (674)
215 3com_A Serine/threonine-protei 100.0 1.2E-35 4E-40 325.0 19.9 246 563-828 31-278 (314)
216 2i6l_A Mitogen-activated prote 100.0 1.9E-35 6.6E-40 323.2 21.2 258 564-828 14-305 (320)
217 3cek_A Dual specificity protei 100.0 1.8E-35 6E-40 323.7 20.8 247 564-829 31-293 (313)
218 4e7w_A Glycogen synthase kinas 100.0 8.4E-36 2.9E-40 337.7 18.8 256 563-828 42-321 (394)
219 3fme_A Dual specificity mitoge 100.0 8.3E-36 2.8E-40 321.9 17.9 247 564-828 10-266 (290)
220 3mi9_A Cell division protein k 100.0 3E-35 1E-39 327.4 22.9 261 563-828 19-311 (351)
221 3q5i_A Protein kinase; CDPK, m 100.0 8.5E-36 2.9E-40 348.6 19.2 246 563-828 38-301 (504)
222 2vx3_A Dual specificity tyrosi 100.0 4.1E-35 1.4E-39 330.5 23.9 257 564-828 57-372 (382)
223 3qyz_A Mitogen-activated prote 100.0 4.6E-35 1.6E-39 327.9 23.8 258 563-828 29-313 (364)
224 3n9x_A Phosphotransferase; mal 100.0 2E-35 6.9E-40 338.7 21.3 195 563-763 28-252 (432)
225 3pg1_A Mitogen-activated prote 100.0 7.5E-36 2.6E-40 333.5 16.9 255 565-828 26-316 (362)
226 3rgf_A Cyclin-dependent kinase 100.0 2.8E-35 9.7E-40 334.5 20.7 257 566-828 26-333 (405)
227 3e3p_A Protein kinase, putativ 100.0 2.1E-35 7.2E-40 329.3 19.2 257 564-828 26-314 (360)
228 2fst_X Mitogen-activated prote 100.0 1.3E-35 4.4E-40 332.9 17.4 254 564-829 32-312 (367)
229 3an0_A Dual specificity mitoge 100.0 1.7E-35 6E-40 327.6 18.2 246 565-828 55-310 (340)
230 2eu9_A Dual specificity protei 100.0 7.8E-35 2.7E-39 323.2 23.5 256 563-828 21-333 (355)
231 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-36 8.1E-41 331.0 10.9 254 564-836 36-303 (319)
232 1zy4_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 318.3 19.6 247 564-828 9-283 (303)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 2E-35 6.8E-40 328.6 17.2 258 564-828 14-305 (353)
234 4exu_A Mitogen-activated prote 100.0 1.1E-34 3.9E-39 325.6 22.9 253 564-829 45-324 (371)
235 3fhr_A MAP kinase-activated pr 100.0 3.1E-35 1.1E-39 325.7 18.0 245 566-828 34-287 (336)
236 1q8y_A SR protein kinase; tran 100.0 6.3E-35 2.1E-39 326.9 20.1 257 563-828 21-333 (373)
237 2wei_A Calmodulin-domain prote 100.0 5.2E-35 1.8E-39 315.9 18.3 247 562-828 23-276 (287)
238 3coi_A Mitogen-activated prote 100.0 1.4E-34 4.9E-39 322.3 21.3 252 564-828 27-305 (353)
239 2iwi_A Serine/threonine-protei 100.0 7.4E-35 2.5E-39 318.5 15.2 238 561-828 31-283 (312)
240 2dyl_A Dual specificity mitoge 100.0 2.1E-34 7.2E-39 315.2 18.7 246 564-828 28-283 (318)
241 3aln_A Dual specificity mitoge 100.0 1.6E-34 5.3E-39 318.2 17.7 249 565-828 26-285 (327)
242 3a99_A Proto-oncogene serine/t 100.0 7.1E-35 2.4E-39 320.4 14.4 236 563-828 45-293 (320)
243 2rio_A Serine/threonine-protei 100.0 2.4E-34 8.2E-39 329.9 19.4 246 566-828 20-295 (434)
244 3p23_A Serine/threonine-protei 100.0 6.1E-34 2.1E-38 326.1 17.5 245 564-828 27-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 5.7E-34 1.9E-38 338.0 13.5 266 563-837 16-311 (676)
246 3uqc_A Probable conserved tran 100.0 4E-33 1.4E-37 301.7 17.7 228 563-837 33-267 (286)
247 2pzi_A Probable serine/threoni 100.0 4.1E-33 1.4E-37 337.6 19.8 238 563-836 82-329 (681)
248 3m2w_A MAP kinase-activated pr 100.0 1E-32 3.5E-37 300.0 19.4 219 567-828 24-256 (299)
249 3dzo_A Rhoptry kinase domain; 100.0 1.5E-32 5.1E-37 313.0 18.0 234 566-828 83-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 5.1E-33 1.7E-37 307.6 13.2 240 562-827 21-329 (336)
251 4azs_A Methyltransferase WBDD; 99.9 2.3E-27 7.9E-32 280.2 8.8 185 567-762 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 6E-25 2E-29 258.1 7.5 184 566-764 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.8 1E-20 3.5E-25 203.9 9.3 140 565-736 94-252 (282)
254 1zth_A RIO1 serine protein kin 99.7 2.1E-17 7.1E-22 175.6 11.8 133 565-711 51-219 (258)
255 1ogq_A PGIP-2, polygalacturona 99.6 1.9E-15 6.5E-20 165.1 9.4 126 362-491 2-135 (313)
256 4gyi_A RIO2 kinase; protein ki 99.5 8.2E-15 2.8E-19 162.6 6.0 132 564-710 98-264 (397)
257 4ecn_A Leucine-rich repeat pro 99.5 1.6E-14 5.4E-19 177.6 7.7 126 362-492 265-502 (876)
258 2jwp_A Malectin, MGC80075; sug 99.4 3.2E-13 1.1E-17 134.2 11.6 145 29-181 7-172 (174)
259 4eco_A Uncharacterized protein 99.4 9.2E-14 3.1E-18 166.6 7.5 121 362-492 26-260 (636)
260 3rgz_A Protein brassinosteroid 99.3 4.6E-13 1.6E-17 164.1 6.4 122 361-491 7-161 (768)
261 3g39_A Variable lymphocyte rec 99.3 6.3E-12 2.2E-16 124.4 8.7 103 394-498 9-117 (170)
262 2jwp_A Malectin, MGC80075; sug 99.3 1.3E-12 4.4E-17 129.8 3.0 142 203-354 6-170 (174)
263 3rgz_A Protein brassinosteroid 99.2 5.6E-12 1.9E-16 154.5 7.0 97 408-504 631-750 (768)
264 4fcg_A Uncharacterized protein 99.2 3.2E-12 1.1E-16 140.4 3.1 129 361-492 22-161 (328)
265 1w8a_A SLIT protein; signaling 99.2 2E-11 6.7E-16 123.2 7.1 98 394-491 8-112 (192)
266 2r9u_A Variable lymphocyte rec 99.2 6E-11 2.1E-15 117.8 9.6 103 394-498 12-120 (174)
267 2wfh_A SLIT homolog 2 protein 99.1 6.1E-11 2.1E-15 119.8 8.9 104 387-491 2-112 (193)
268 3tm0_A Aminoglycoside 3'-phosp 99.1 1.5E-10 5.2E-15 122.3 11.6 139 565-710 18-213 (263)
269 2ifg_A High affinity nerve gro 99.1 8.3E-11 2.8E-15 129.8 8.8 102 394-498 8-118 (347)
270 3e6j_A Variable lymphocyte rec 99.1 9E-11 3.1E-15 121.8 8.4 97 395-491 20-122 (229)
271 2o6r_A Variable lymphocyte rec 99.1 1.3E-10 4.6E-15 115.2 8.5 98 394-491 7-110 (177)
272 2o6s_A Variable lymphocyte rec 99.0 3.9E-10 1.3E-14 114.9 8.6 98 394-491 7-110 (208)
273 2v9t_B SLIT homolog 2 protein 99.0 3.9E-10 1.3E-14 116.3 7.9 98 394-491 11-114 (220)
274 1nd4_A Aminoglycoside 3'-phosp 99.0 1.8E-09 6.2E-14 113.3 11.6 128 570-710 29-214 (264)
275 2v70_A SLIT-2, SLIT homolog 2 98.9 7.9E-10 2.7E-14 114.0 7.4 98 394-491 11-115 (220)
276 2v70_A SLIT-2, SLIT homolog 2 98.9 1E-09 3.6E-14 113.0 7.1 89 408-498 80-168 (220)
277 3oja_A Leucine-rich immune mol 98.9 4.5E-10 1.5E-14 130.1 3.0 79 409-490 144-223 (487)
278 3dxp_A Putative acyl-COA dehyd 98.9 5.7E-09 1.9E-13 115.7 11.7 140 567-710 44-248 (359)
279 2wfh_A SLIT homolog 2 protein 98.9 1.6E-09 5.5E-14 109.3 6.6 89 408-498 53-141 (193)
280 1ogq_A PGIP-2, polygalacturona 98.9 7.7E-10 2.6E-14 120.4 4.1 108 383-490 37-158 (313)
281 3v47_A TOLL-like receptor 5B a 98.9 1.6E-09 5.6E-14 123.7 6.4 104 387-491 2-113 (455)
282 3m19_A Variable lymphocyte rec 98.8 3E-09 1E-13 111.7 6.5 97 395-491 15-117 (251)
283 1w8a_A SLIT protein; signaling 98.8 4.4E-09 1.5E-13 105.9 6.4 89 408-498 53-141 (192)
284 2v9t_B SLIT homolog 2 protein 98.8 7E-09 2.4E-13 106.8 7.2 88 409-498 80-167 (220)
285 2o6r_A Variable lymphocyte rec 98.8 9E-09 3.1E-13 101.9 7.6 89 408-498 51-139 (177)
286 2xot_A Amphoterin-induced prot 98.8 6.6E-09 2.3E-13 115.4 7.4 108 384-491 7-122 (361)
287 4g8a_A TOLL-like receptor 4; l 98.8 6.7E-09 2.3E-13 123.3 7.6 90 407-498 492-582 (635)
288 3e6j_A Variable lymphocyte rec 98.7 1E-08 3.5E-13 106.3 7.7 88 408-498 87-174 (229)
289 4fcg_A Uncharacterized protein 98.7 8.2E-09 2.8E-13 113.1 6.6 79 410-488 230-308 (328)
290 3sg8_A APH(2'')-ID; antibiotic 98.7 1.1E-08 3.6E-13 110.8 7.2 182 567-763 26-287 (304)
291 4g8a_A TOLL-like receptor 4; l 98.7 6.8E-09 2.3E-13 123.3 6.1 94 398-491 35-134 (635)
292 3zyi_A Leucine-rich repeat-con 98.7 1.5E-08 5E-13 116.1 8.4 97 395-491 55-157 (452)
293 2je0_A Acidic leucine-rich nuc 98.7 5.8E-09 2E-13 100.1 4.2 79 409-489 17-96 (149)
294 2o6q_A Variable lymphocyte rec 98.7 1.4E-08 4.9E-13 107.8 7.3 108 383-491 6-119 (270)
295 3m19_A Variable lymphocyte rec 98.7 1.8E-08 6E-13 105.8 7.9 89 408-498 106-194 (251)
296 2ell_A Acidic leucine-rich nuc 98.7 9.4E-09 3.2E-13 100.7 5.3 83 407-491 22-105 (168)
297 2z81_A CD282 antigen, TOLL-lik 98.7 7.1E-09 2.4E-13 121.4 4.7 96 395-491 5-108 (549)
298 2o6s_A Variable lymphocyte rec 98.7 2.7E-08 9.3E-13 101.1 7.9 89 408-498 75-163 (208)
299 2id5_A Lingo-1, leucine rich r 98.7 2.5E-08 8.5E-13 114.8 8.3 97 395-491 12-114 (477)
300 1dce_A Protein (RAB geranylger 98.7 1.7E-08 5.9E-13 118.8 6.7 79 408-489 462-541 (567)
301 3rfs_A Internalin B, repeat mo 98.6 3.2E-08 1.1E-12 105.1 8.0 89 408-498 132-220 (272)
302 2je0_A Acidic leucine-rich nuc 98.6 8.8E-09 3E-13 98.8 2.7 80 408-489 41-121 (149)
303 1ozn_A Reticulon 4 receptor; N 98.6 3.7E-08 1.3E-12 105.2 7.7 95 397-491 14-115 (285)
304 1xku_A Decorin; proteoglycan, 98.6 5.1E-08 1.7E-12 106.5 8.8 93 394-489 31-129 (330)
305 3vq2_A TLR4, TOLL-like recepto 98.6 2.9E-08 9.9E-13 117.8 7.2 95 397-491 14-114 (606)
306 2z62_A TOLL-like receptor 4, v 98.6 3E-08 1E-12 105.5 6.3 94 398-491 11-110 (276)
307 3zyj_A Leucine-rich repeat-con 98.6 5.2E-08 1.8E-12 111.0 8.5 97 395-491 44-146 (440)
308 2ft3_A Biglycan; proteoglycan, 98.6 5.2E-08 1.8E-12 106.6 7.6 94 394-490 33-132 (332)
309 2z80_A TOLL-like receptor 2, v 98.6 2.5E-08 8.7E-13 110.1 5.0 97 395-491 31-134 (353)
310 3t6q_A CD180 antigen; protein- 98.6 3.1E-08 1.1E-12 117.5 6.1 107 384-491 3-115 (606)
311 2xwt_C Thyrotropin receptor; s 98.6 3.2E-08 1.1E-12 102.9 5.4 93 399-491 18-115 (239)
312 2r9u_A Variable lymphocyte rec 98.6 6.9E-08 2.4E-12 95.5 7.3 77 412-491 15-91 (174)
313 4b8c_D Glucose-repressible alc 98.6 2.9E-08 1E-12 120.4 5.4 78 409-489 247-324 (727)
314 3g39_A Variable lymphocyte rec 98.6 7.9E-08 2.7E-12 94.7 7.3 78 411-491 11-88 (170)
315 2z66_A Variable lymphocyte rec 98.5 6.2E-08 2.1E-12 104.5 6.9 89 408-498 174-263 (306)
316 4eco_A Uncharacterized protein 98.5 1.6E-08 5.6E-13 120.9 2.3 84 408-491 205-315 (636)
317 4ezg_A Putative uncharacterize 98.5 3.7E-08 1.3E-12 99.3 4.6 80 409-489 88-167 (197)
318 4b8c_D Glucose-repressible alc 98.5 7.6E-08 2.6E-12 116.8 7.7 81 408-491 223-303 (727)
319 3v47_A TOLL-like receptor 5B a 98.5 7.8E-08 2.7E-12 109.7 7.0 87 409-497 323-409 (455)
320 3rfs_A Internalin B, repeat mo 98.5 1.1E-07 3.7E-12 101.1 7.5 79 410-488 110-188 (272)
321 3zyj_A Leucine-rich repeat-con 98.5 6.2E-08 2.1E-12 110.4 6.0 89 408-498 206-294 (440)
322 3zyi_A Leucine-rich repeat-con 98.5 6.7E-08 2.3E-12 110.5 6.3 89 408-498 217-305 (452)
323 3oja_B Anopheles plasmodium-re 98.5 7.4E-08 2.5E-12 114.3 6.8 83 409-491 75-157 (597)
324 1dce_A Protein (RAB geranylger 98.5 6.3E-08 2.2E-12 114.0 6.1 77 410-491 442-518 (567)
325 2o6q_A Variable lymphocyte rec 98.5 1.3E-07 4.4E-12 100.3 8.0 89 408-498 132-220 (270)
326 1wwl_A Monocyte differentiatio 98.5 3.6E-08 1.2E-12 107.0 3.6 81 409-490 95-182 (312)
327 1ozn_A Reticulon 4 receptor; N 98.5 4.7E-08 1.6E-12 104.4 4.4 89 408-498 152-240 (285)
328 1p9a_G Platelet glycoprotein I 98.5 1.3E-07 4.4E-12 101.7 7.8 88 408-498 123-210 (290)
329 2ell_A Acidic leucine-rich nuc 98.5 6.2E-08 2.1E-12 94.8 4.6 81 409-489 71-155 (168)
330 2ifg_A High affinity nerve gro 98.5 6.9E-08 2.3E-12 106.2 5.4 77 413-491 12-90 (347)
331 4ecn_A Leucine-rich repeat pro 98.5 2.8E-08 9.6E-13 122.2 1.8 84 408-491 447-558 (876)
332 2xot_A Amphoterin-induced prot 98.5 9.8E-08 3.3E-12 105.9 5.7 83 408-490 63-145 (361)
333 1ziw_A TOLL-like receptor 3; i 98.5 1.5E-07 5.3E-12 113.2 7.6 97 395-491 5-107 (680)
334 3vq2_A TLR4, TOLL-like recepto 98.4 1.1E-07 3.7E-12 112.8 5.5 81 409-489 448-529 (606)
335 2z63_A TOLL-like receptor 4, v 98.4 1.3E-07 4.5E-12 111.0 6.0 89 408-498 444-533 (570)
336 1a9n_A U2A', U2A'; complex (nu 98.4 8.2E-08 2.8E-12 94.9 3.7 78 409-489 42-121 (176)
337 3a79_B TLR6, VLRB.59, TOLL-lik 98.4 1.8E-07 6.2E-12 110.0 6.7 92 397-491 34-131 (562)
338 2z62_A TOLL-like receptor 4, v 98.4 2.7E-07 9.3E-12 97.9 7.3 81 409-489 76-157 (276)
339 3j0a_A TOLL-like receptor 5; m 98.4 1.6E-07 5.4E-12 116.1 6.2 82 408-489 23-105 (844)
340 1p9a_G Platelet glycoprotein I 98.4 3E-07 1E-11 98.7 7.5 82 408-489 99-180 (290)
341 2z66_A Variable lymphocyte rec 98.4 1.8E-07 6.2E-12 100.8 5.3 84 408-491 149-233 (306)
342 3t6q_A CD180 antigen; protein- 98.4 1.1E-07 3.8E-12 112.7 3.9 86 409-497 476-561 (606)
343 4ezg_A Putative uncharacterize 98.4 9.8E-08 3.3E-12 96.2 2.6 82 408-491 65-146 (197)
344 4glp_A Monocyte differentiatio 98.4 2.6E-07 9E-12 100.0 6.1 81 410-490 92-178 (310)
345 4ay9_X Follicle-stimulating ho 98.4 1.9E-07 6.4E-12 103.1 4.8 97 394-491 9-114 (350)
346 1xku_A Decorin; proteoglycan, 98.3 3E-07 1E-11 100.4 6.0 81 409-490 192-272 (330)
347 2id5_A Lingo-1, leucine rich r 98.3 3E-07 1E-11 105.7 5.9 89 408-498 247-335 (477)
348 2z63_A TOLL-like receptor 4, v 98.3 3.5E-07 1.2E-11 107.4 6.5 85 407-491 26-110 (570)
349 2ft3_A Biglycan; proteoglycan, 98.3 3.1E-07 1.1E-11 100.4 5.3 81 409-490 193-273 (332)
350 3oja_B Anopheles plasmodium-re 98.3 5E-07 1.7E-11 107.2 7.5 84 408-491 98-181 (597)
351 2z81_A CD282 antigen, TOLL-lik 98.3 3.2E-07 1.1E-11 107.3 5.7 84 408-491 49-133 (549)
352 1wwl_A Monocyte differentiatio 98.3 1.3E-07 4.4E-12 102.6 2.0 81 408-489 120-209 (312)
353 2z7x_B TOLL-like receptor 1, v 98.3 2.3E-07 7.8E-12 107.9 4.2 78 409-489 45-123 (520)
354 3r70_A Aminoglycoside phosphot 98.3 3E-06 1E-10 92.2 12.8 131 567-710 43-237 (320)
355 2z7x_B TOLL-like receptor 1, v 98.3 3.4E-07 1.2E-11 106.4 5.4 78 409-489 21-98 (520)
356 3oja_A Leucine-rich immune mol 98.3 4E-07 1.4E-11 105.3 5.3 85 408-498 168-252 (487)
357 1a9n_A U2A', U2A'; complex (nu 98.3 3.5E-07 1.2E-11 90.3 4.1 79 408-489 63-148 (176)
358 3cvr_A Invasion plasmid antige 98.3 3.1E-07 1E-11 107.9 4.0 88 386-489 40-128 (571)
359 3j0a_A TOLL-like receptor 5; m 98.3 9.6E-07 3.3E-11 109.1 8.2 80 410-489 74-156 (844)
360 3d1u_A Putative fructosamine-3 98.2 3E-06 1E-10 90.9 10.7 137 567-709 21-215 (288)
361 3o6n_A APL1; leucine-rich repe 98.2 1.1E-06 3.8E-11 98.2 7.5 82 408-490 92-174 (390)
362 4glp_A Monocyte differentiatio 98.2 1E-06 3.4E-11 95.4 6.5 76 409-489 224-302 (310)
363 3a79_B TLR6, VLRB.59, TOLL-lik 98.2 7.6E-07 2.6E-11 104.7 5.9 80 408-490 75-155 (562)
364 3o6n_A APL1; leucine-rich repe 98.2 1.1E-06 3.7E-11 98.2 6.8 79 410-489 70-149 (390)
365 3rw6_A Nuclear RNA export fact 98.2 5.6E-07 1.9E-11 95.0 3.8 78 408-487 169-257 (267)
366 2z80_A TOLL-like receptor 2, v 98.2 1E-06 3.4E-11 97.2 5.8 83 408-491 75-159 (353)
367 1ds9_A Outer arm dynein; leuci 98.2 6.7E-08 2.3E-12 97.5 -3.6 76 409-489 48-123 (198)
368 3tdw_A Gentamicin resistance p 98.2 1.5E-05 5E-10 86.2 14.2 135 567-710 25-224 (306)
369 3ats_A Putative uncharacterize 98.2 7.9E-06 2.7E-10 90.0 12.0 79 567-645 26-122 (357)
370 2xwt_C Thyrotropin receptor; s 98.1 1.1E-06 3.6E-11 91.3 4.5 80 408-489 54-138 (239)
371 1ziw_A TOLL-like receptor 3; i 98.1 2E-06 6.7E-11 103.5 7.2 81 409-489 97-179 (680)
372 1ds9_A Outer arm dynein; leuci 98.1 7.7E-08 2.6E-12 97.0 -4.5 79 410-491 19-103 (198)
373 4gkh_A Aminoglycoside 3'-phosp 98.1 1.3E-05 4.5E-10 84.4 12.6 134 568-710 31-223 (272)
374 3o53_A Protein LRIM1, AGAP0063 98.1 1.2E-06 4.3E-11 95.0 4.3 82 409-496 169-250 (317)
375 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.7E-05 5.7E-10 88.0 13.0 139 567-710 47-243 (362)
376 4fmz_A Internalin; leucine ric 98.0 2.3E-06 7.8E-11 93.8 4.2 78 408-489 264-341 (347)
377 1h6t_A Internalin B; cell adhe 98.0 4.7E-06 1.6E-10 89.4 6.6 74 410-489 135-208 (291)
378 1xeu_A Internalin C; cellular 98.0 4.4E-06 1.5E-10 88.2 5.8 75 409-489 106-180 (263)
379 1h6t_A Internalin B; cell adhe 98.0 4.3E-06 1.5E-10 89.7 5.3 78 408-491 111-188 (291)
380 1xeu_A Internalin C; cellular 98.0 6.2E-06 2.1E-10 87.1 6.1 76 408-490 62-137 (263)
381 1m9s_A Internalin B; cell inva 98.0 6.3E-06 2.2E-10 97.6 6.8 75 409-489 131-205 (605)
382 3o53_A Protein LRIM1, AGAP0063 97.9 5.7E-06 2E-10 89.7 5.6 81 408-491 143-224 (317)
383 1m9s_A Internalin B; cell inva 97.9 5E-06 1.7E-10 98.5 5.4 78 408-491 108-185 (605)
384 3bz5_A Internalin-J, INLJ; leu 97.9 7.6E-06 2.6E-10 93.7 6.7 75 408-491 63-137 (457)
385 1h6u_A Internalin H; cell adhe 97.9 7.1E-06 2.4E-10 88.7 6.0 76 408-489 128-203 (308)
386 3bz5_A Internalin-J, INLJ; leu 97.9 7.8E-06 2.7E-10 93.6 6.3 75 408-491 84-158 (457)
387 1jl5_A Outer protein YOPM; leu 97.9 1.3E-06 4.4E-11 100.0 -0.5 63 408-471 10-85 (454)
388 1jl5_A Outer protein YOPM; leu 97.9 9.3E-06 3.2E-10 92.8 6.6 74 409-490 131-204 (454)
389 1h6u_A Internalin H; cell adhe 97.9 8.9E-06 3E-10 87.9 6.0 76 408-489 150-225 (308)
390 3cvr_A Invasion plasmid antige 97.9 8.1E-06 2.8E-10 95.8 5.5 72 409-489 160-238 (571)
391 2ast_B S-phase kinase-associat 97.9 7.9E-07 2.7E-11 97.0 -3.2 80 409-489 70-150 (336)
392 1o6v_A Internalin A; bacterial 97.8 1.1E-05 3.6E-10 92.5 5.3 75 409-489 309-383 (466)
393 2ast_B S-phase kinase-associat 97.8 1.6E-06 5.5E-11 94.4 -1.6 81 409-489 93-176 (336)
394 3g06_A SSPH2 (leucine-rich rep 97.8 1.7E-05 5.9E-10 94.1 6.5 71 410-489 222-292 (622)
395 2ca6_A RAN GTPase-activating p 97.8 1.5E-06 5.3E-11 96.9 -2.4 81 409-489 216-311 (386)
396 2ca6_A RAN GTPase-activating p 97.7 3.3E-06 1.1E-10 94.2 -0.6 81 409-489 32-130 (386)
397 4fmz_A Internalin; leucine ric 97.7 1.6E-05 5.3E-10 87.1 4.6 78 408-489 242-319 (347)
398 3goz_A Leucine-rich repeat-con 97.7 5.5E-06 1.9E-10 91.7 0.9 80 410-489 23-117 (362)
399 2q83_A YTAA protein; 2635576, 97.7 0.00012 4E-09 79.7 11.5 138 568-709 39-251 (346)
400 1o6v_A Internalin A; bacterial 97.7 1.9E-05 6.6E-10 90.4 4.8 77 409-491 68-144 (466)
401 3rw6_A Nuclear RNA export fact 97.7 6.9E-06 2.4E-10 86.6 0.2 68 423-494 160-231 (267)
402 2olc_A MTR kinase, methylthior 97.6 0.00015 5E-09 81.2 11.0 73 567-641 36-120 (397)
403 3jr1_A Putative fructosamine-3 97.6 0.00033 1.1E-08 75.7 12.1 136 567-706 42-232 (312)
404 3g06_A SSPH2 (leucine-rich rep 97.6 1.9E-05 6.5E-10 93.7 2.4 71 408-483 240-310 (622)
405 3goz_A Leucine-rich repeat-con 97.5 1.8E-05 6.1E-10 87.5 1.3 78 413-490 2-89 (362)
406 4ay9_X Follicle-stimulating ho 97.4 9.1E-05 3.1E-09 81.4 5.1 76 409-486 154-231 (350)
407 1z7x_W Ribonuclease inhibitor; 97.4 1.2E-05 4.2E-10 91.5 -3.0 81 409-489 313-406 (461)
408 2pyw_A Uncharacterized protein 97.3 0.00074 2.5E-08 76.1 10.9 77 679-759 231-312 (420)
409 3f7w_A Putative fructosamine-3 97.3 0.00075 2.6E-08 71.8 10.2 73 567-643 21-97 (288)
410 1z7x_W Ribonuclease inhibitor; 97.1 3.5E-05 1.2E-09 87.7 -3.3 81 409-489 256-349 (461)
411 3un9_A NLR family member X1; l 97.0 4.7E-05 1.6E-09 84.6 -2.4 81 409-489 155-247 (372)
412 2ppq_A HSK, HK, homoserine kin 97.0 0.002 7E-08 69.3 9.9 141 567-709 28-216 (322)
413 3dxq_A Choline/ethanolamine ki 96.9 0.0029 1E-07 67.6 10.4 127 567-710 24-202 (301)
414 3csv_A Aminoglycoside phosphot 96.9 0.0036 1.2E-07 67.9 10.8 139 567-710 24-217 (333)
415 1nw1_A Choline kinase (49.2 KD 96.8 0.0034 1.2E-07 70.9 10.0 71 567-643 79-159 (429)
416 3un9_A NLR family member X1; l 96.7 0.00018 6.1E-09 79.9 -1.4 80 410-489 102-191 (372)
417 2qg7_A Ethanolamine kinase PV0 96.6 0.01 3.4E-07 67.5 12.7 72 567-643 114-188 (458)
418 1io0_A Tropomodulin; LRR prote 96.6 0.00021 7.1E-09 71.0 -1.4 79 410-488 37-128 (185)
419 3feg_A Choline/ethanolamine ki 96.6 0.0071 2.4E-07 67.0 10.7 139 567-710 56-254 (379)
420 3c5i_A Choline kinase; choline 96.4 0.011 3.6E-07 65.2 11.0 72 567-643 39-121 (369)
421 1io0_A Tropomodulin; LRR prote 96.4 0.00028 9.4E-09 70.1 -1.8 81 409-489 65-159 (185)
422 3ogk_B Coronatine-insensitive 96.4 0.00025 8.7E-09 83.3 -3.1 79 410-489 165-251 (592)
423 3rfe_A Platelet glycoprotein I 96.3 0.0043 1.5E-07 57.8 5.7 56 413-470 12-68 (130)
424 1zyl_A Hypothetical protein YI 96.2 0.011 3.8E-07 63.7 9.0 139 568-710 33-223 (328)
425 3ogk_B Coronatine-insensitive 95.9 0.002 6.8E-08 75.5 1.5 58 409-467 192-253 (592)
426 2p1m_B Transport inhibitor res 95.9 0.00062 2.1E-08 79.9 -2.9 80 409-489 432-514 (594)
427 2p1m_B Transport inhibitor res 95.8 0.00094 3.2E-08 78.3 -1.7 82 409-490 105-193 (594)
428 3rfe_A Platelet glycoprotein I 95.6 0.011 3.9E-07 54.8 5.3 59 436-498 11-70 (130)
429 3f2s_A CK, chetk-alpha, cholin 95.5 0.066 2.3E-06 59.5 11.8 140 567-710 58-280 (401)
430 3i1a_A Spectinomycin phosphotr 95.3 0.04 1.4E-06 59.9 9.2 68 570-643 32-108 (339)
431 2ra8_A Uncharacterized protein 95.3 0.0023 8E-08 70.5 -0.8 64 408-471 251-321 (362)
432 3sb4_A Hypothetical leucine ri 94.7 0.018 6E-07 62.3 4.2 76 410-488 227-304 (329)
433 2yle_A Protein spire homolog 1 94.5 0.15 5.1E-06 51.3 9.8 166 641-835 33-201 (229)
434 3e4g_A ATP synthase subunit S, 94.2 0.0065 2.2E-07 59.5 -0.7 81 409-489 61-147 (176)
435 3sb4_A Hypothetical leucine ri 94.1 0.03 1E-06 60.4 4.1 76 409-487 250-327 (329)
436 3mes_A Choline kinase; malaria 93.7 0.29 9.8E-06 54.8 11.4 72 567-643 76-157 (424)
437 2ra8_A Uncharacterized protein 93.2 0.01 3.5E-07 65.3 -1.5 58 432-489 251-315 (362)
438 3g15_A CK, chetk-alpha, cholin 87.3 3.2 0.00011 45.8 11.9 29 682-710 246-280 (401)
439 1pgv_A TMD-1, tropomodulin TMD 84.6 0.1 3.4E-06 52.0 -1.9 58 410-467 71-136 (197)
440 1pgv_A TMD-1, tropomodulin TMD 83.7 0.23 7.9E-06 49.4 0.2 81 409-489 41-134 (197)
441 4fdw_A Leucine rich hypothetic 81.2 1.1 3.8E-05 49.6 4.6 77 410-489 158-234 (401)
442 4fdw_A Leucine rich hypothetic 79.3 1.7 5.8E-05 48.1 5.3 76 410-489 272-353 (401)
443 4ann_A ESSB; membrane protein, 76.1 7.2 0.00024 39.0 8.2 116 614-764 43-158 (215)
444 4ano_A ESSB; membrane protein, 70.5 7.5 0.00026 39.0 6.8 115 614-764 48-163 (219)
445 3e4g_A ATP synthase subunit S, 70.4 0.86 2.9E-05 44.3 -0.1 65 425-489 53-122 (176)
446 3cxl_A N-chimerin; SH2, RHO-GA 63.8 0.7 2.4E-05 52.4 -2.7 59 565-626 146-214 (463)
447 2w3j_A Carbohydrate binding mo 63.6 50 0.0017 30.5 10.7 89 90-183 40-132 (145)
448 2ks1_B Epidermal growth factor 58.8 3.6 0.00012 30.0 1.3 13 527-539 29-41 (44)
449 4h09_A Hypothetical leucine ri 55.4 9.8 0.00034 41.1 4.9 74 410-488 264-340 (379)
450 4fs7_A Uncharacterized protein 54.7 8.3 0.00028 42.1 4.2 73 410-488 298-373 (394)
451 2w47_A Lipolytic enzyme, G-D-S 54.1 1E+02 0.0036 28.1 11.2 89 88-181 39-132 (144)
452 2jwa_A Receptor tyrosine-prote 51.3 3.3 0.00011 30.2 0.1 15 525-539 27-41 (44)
453 2l2t_A Receptor tyrosine-prote 48.5 4.6 0.00016 29.4 0.5 14 527-540 28-41 (44)
454 4fs7_A Uncharacterized protein 46.9 7.9 0.00027 42.2 2.4 55 409-467 320-376 (394)
455 4gt6_A Cell surface protein; l 45.3 18 0.00061 39.3 5.0 73 410-488 289-364 (394)
456 4gt6_A Cell surface protein; l 40.9 15 0.0005 40.0 3.4 72 409-487 311-384 (394)
457 2w87_A Esterase D, XYL-CBM35; 40.0 1.4E+02 0.0047 27.2 9.4 85 91-180 41-131 (139)
458 2vzp_A Aocbm35, EXO-beta-D-glu 37.3 2.1E+02 0.0072 25.2 10.2 85 88-177 38-127 (127)
459 4h09_A Hypothetical leucine ri 36.0 28 0.00096 37.3 4.6 75 410-488 241-317 (379)
460 2wz8_A Cellulosome protein doc 27.3 2.7E+02 0.0093 25.8 9.3 84 98-181 56-150 (156)
461 1cja_A Protein (actin-fragmin 26.6 2.2E+02 0.0074 30.3 9.2 77 630-710 156-237 (342)
462 3ls8_A Phosphatidylinositol 3- 21.8 6.7E+02 0.023 28.8 12.8 82 620-709 403-501 (614)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.5e-51 Score=448.22 Aligned_cols=255 Identities=28% Similarity=0.427 Sum_probs=208.1
Q ss_pred hccccccccCcEEEEEEEEC-------CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.||+|+||+||+|++. ++.||||+++.......++|.+|+++|++++|||||+++|+|.+....++|||
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 123 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence 34678999999999999863 57899999988777777899999999999999999999999999999999999
Q ss_pred EccCCchhhhhhhcc-------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEE
Q 002887 637 FMANGNLQAHLLEDK-------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLA 703 (870)
Q Consensus 637 y~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~ 703 (870)
||++|+|.++++... ...++|.+++.|+.|||+||+|||+. +|+||||||+||||++++.+||+
T Consensus 124 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp CCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEEC
T ss_pred cCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEc
Confidence 999999999987542 24699999999999999999999998 99999999999999999999999
Q ss_pred eccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhc
Q 002887 704 DFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLAR 782 (870)
Q Consensus 704 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~ 782 (870)
|||+++.....+.........||+.|||||++.+..++.++|||||||+||||+| |+.||........+.. +..
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~-----i~~ 275 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDC-----ITQ 275 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHH-----HHH
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHc
Confidence 9999987644443444456789999999999999999999999999999999999 8999987654332221 222
Q ss_pred CCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 783 GDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 783 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
+. ..+.+..++..+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus 276 g~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TC---------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CC---------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 21 112233455678899999999999999999999999998653
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-51 Score=449.18 Aligned_cols=256 Identities=23% Similarity=0.405 Sum_probs=214.8
Q ss_pred HHhhccccccccCcEEEEEEEEC-------CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEE
Q 002887 561 ITNNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMG 632 (870)
Q Consensus 561 ~t~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 632 (870)
.+.+|.+.||+|+||+||+|++. ++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+....+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34567789999999999999973 57899999976533 34578999999999999999999999999999999
Q ss_pred EEEEEccCCchhhhhhhcc--------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887 633 LIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF 698 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 698 (870)
+|||||++|+|.++|.... ...++|.+++.|+.|||+||+|||++ +||||||||+||||++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 9999999999999996532 24699999999999999999999998 999999999999999999
Q ss_pred cEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002887 699 QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVS 777 (870)
Q Consensus 699 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~ 777 (870)
++||+|||+++.....+.........||+.|||||++.++.++.++|||||||+||||+| |+.||.+....+...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~---- 258 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE---- 258 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH----
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH----
Confidence 999999999987644433344456789999999999999999999999999999999999 899998765433221
Q ss_pred HHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 778 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
.+..+.. .+.+..++..+.+++.+||+.+|++||||.||++.|+..
T Consensus 259 -~i~~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 -MIRNRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HHHcCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 2222221 122344567789999999999999999999999999853
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-51 Score=446.33 Aligned_cols=254 Identities=28% Similarity=0.442 Sum_probs=214.6
Q ss_pred hccccccccCcEEEEEEEEC-------CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.||+|+||+||+|++. ++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|||
T Consensus 16 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~E 95 (299)
T 4asz_A 16 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFE 95 (299)
T ss_dssp EEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred EEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEE
Confidence 35689999999999999863 57899999988777777899999999999999999999999999999999999
Q ss_pred EccCCchhhhhhhcc-----------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEec
Q 002887 637 FMANGNLQAHLLEDK-----------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADF 705 (870)
Q Consensus 637 y~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DF 705 (870)
||++|+|.++|.... ...++|.+++.|+.|||+||+|||++ +|+||||||+||||++++.+||+||
T Consensus 96 y~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 96 YMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp CCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred cCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCc
Confidence 999999999997542 35799999999999999999999998 9999999999999999999999999
Q ss_pred cCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCC
Q 002887 706 GLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784 (870)
Q Consensus 706 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~ 784 (870)
|+|+...............||+.|||||++.++.++.++|||||||++|||+| |+.||......+.+.. +..+.
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~-----i~~~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIEC-----ITQGR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----HHHTC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHcCC
Confidence 99987644333333445679999999999999999999999999999999999 8999987654332222 22222
Q ss_pred cchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 785 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
. ...+..++..+.+++.+||+.||++||||+||++.|+++.
T Consensus 248 ~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 V---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp C---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1 1223345567889999999999999999999999998854
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3e-50 Score=437.97 Aligned_cols=255 Identities=29% Similarity=0.512 Sum_probs=204.0
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||+||+|++.+ .||||+++.. .....+.|.+|++++++++|||||+++|+|.+ +..++|||||++|
T Consensus 39 ~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 39 MLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp CEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 356889999999999999876 5999998754 33456789999999999999999999999865 5689999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.++|...+ ..++|.+++.|+.|||+||+|||++ +||||||||+||||++++++||+|||+|+............
T Consensus 117 sL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 117 SLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp BHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred CHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 9999996543 4699999999999999999999998 99999999999999999999999999998765444444455
Q ss_pred cccCCCCccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 722 TVVGTPGYLDPEYYIS---NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~---~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
...||+.|||||++.+ +.++.++|||||||+||||+||+.||........+... +..+. ..+.+ ....
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~----~~~~~----~~p~~-~~~~ 263 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM----VGRGY----ASPDL-SKLY 263 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH----HHTTC----CCCCS-TTSC
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH----HhcCC----CCCCc-cccc
Confidence 6789999999999964 35899999999999999999999999865543333222 22221 11111 1223
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
..++..+.+++.+||+.+|++||||.||++.|+.+
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 34566788999999999999999999999999864
No 5
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.5e-48 Score=430.52 Aligned_cols=258 Identities=29% Similarity=0.403 Sum_probs=214.1
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccch-hhhHHHHHHHHHHHHhcc-ccceeEEEEEecC-CeEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHH-KNLTILVGYCDEG-ANMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~-~~~~ 632 (870)
..+.+.||+|+||+||+|.+. ++.||||++..... ...++|.+|+++|.+++| ||||+++|+|.+. ...+
T Consensus 66 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~ 145 (353)
T 4ase_A 66 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 145 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred eEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEE
Confidence 345689999999999999874 25799999976543 345779999999999965 8999999999764 5689
Q ss_pred EEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887 633 LIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF 698 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 698 (870)
+|||||++|+|.++|+..+. ..++|.+++.++.|||+||+|||++ +||||||||+|||+++++
T Consensus 146 iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 222 (353)
T 4ase_A 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 222 (353)
T ss_dssp EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCC
Confidence 99999999999999975432 4589999999999999999999998 999999999999999999
Q ss_pred cEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002887 699 QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVS 777 (870)
Q Consensus 699 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~ 777 (870)
.+||+|||+|+.+..+..........||+.|||||++.++.++.++|||||||+||||+| |+.||........+.+
T Consensus 223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~--- 299 (353)
T 4ase_A 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR--- 299 (353)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH---
T ss_pred CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH---
Confidence 999999999997754444444556789999999999999999999999999999999998 9999987654333322
Q ss_pred HHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 778 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.+..+.. ...+.....++.+++.+||+.||++|||+.||++.|+++++.
T Consensus 300 -~i~~g~~---------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 -RLKEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp -HHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -HHHcCCC---------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 2222211 122334456788999999999999999999999999998754
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-48 Score=423.97 Aligned_cols=264 Identities=23% Similarity=0.315 Sum_probs=202.4
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC----eEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----NMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~LV~Ey~~ 639 (870)
.+.+.||+|+||+||+|+++|+.||||++...... ...++.|+..+.+++|||||+++++|.+.+ ..+||||||+
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~ 84 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHE 84 (303)
T ss_dssp EEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred EEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCC
Confidence 35689999999999999999999999999765322 223355666677889999999999997653 5799999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC-----CCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG-----CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-----~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
+|+|.+++.. ..++|..+++++.|+++||+|||++ +.++|+||||||+||||++++++||+|||+++.....
T Consensus 85 ~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 85 HGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 9999999954 4699999999999999999999976 2568999999999999999999999999999876433
Q ss_pred CCcc--ccccccCCCCccCccccccC------CCCccchHHHHHHHHHHHHhCCCCCCCCCcc-----------chHHHH
Q 002887 715 GGTH--VSTTVVGTPGYLDPEYYISN------RLTEKSDVYSFGVVLLELITGQPVIQKTPQR-----------TLIGQW 775 (870)
Q Consensus 715 ~~~~--~~~~~~gt~~y~APE~~~~~------~~~~ksDVwS~GvvL~elltG~~p~~~~~~~-----------~~l~~~ 775 (870)
.... ......||+.|||||++.+. .++.++|||||||+||||+||++|+...... .....+
T Consensus 162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~ 241 (303)
T 3hmm_A 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241 (303)
T ss_dssp TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHH
T ss_pred CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHH
Confidence 2221 22346799999999999764 3678999999999999999998876533211 112222
Q ss_pred HHHHhhcCCcchhcccccCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 776 VSSMLARGDIKNIVDHRLQGD-FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.......+ .++.+... .+.+....+.+++.+||+.||++||||.||+++|+++.+.
T Consensus 242 ~~~~~~~~-----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 242 RKVVCEQK-----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHTTSC-----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhccc-----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22211111 11222111 1235667889999999999999999999999999987654
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.4e-48 Score=429.18 Aligned_cols=247 Identities=22% Similarity=0.365 Sum_probs=203.6
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
+.+.+.||+|+||+||+|+.. ++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..++|||||
T Consensus 26 Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~ 105 (350)
T 4b9d_A 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYC 105 (350)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 345678999999999999986 8899999997653 334577999999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++...+...+++.++..|+.||+.||+|||++ +|+||||||+||||++++.+||+|||+|+.+.. ...
T Consensus 106 ~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~--~~~ 180 (350)
T 4b9d_A 106 EGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS--TVE 180 (350)
T ss_dssp TTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH--HHH
T ss_pred CCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC--Ccc
Confidence 999999999876667789999999999999999999998 999999999999999999999999999986521 122
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....+||+.|||||++.+..|+.++|||||||++|||++|++||........+.+. .. +... ...
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i----~~-~~~~---------~~~ 246 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI----IS-GSFP---------PVS 246 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----HH-TCCC---------CCC
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----Hc-CCCC---------CCC
Confidence 334568999999999999999999999999999999999999999876544333322 21 1111 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+|+.+||+.||++|||+.|+++
T Consensus 247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 234457889999999999999999999986
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-47 Score=422.87 Aligned_cols=245 Identities=22% Similarity=0.297 Sum_probs=207.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
++.+.||+|+||.||+|+.. ++.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||++|
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred EEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 34568999999999999986 8899999998776666778999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.+ ..+++.++..++.||+.||+|||++ +|+||||||+||||+.++++||+|||+|+.+... .....
T Consensus 157 ~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~--~~~~~ 228 (346)
T 4fih_A 157 ALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRK 228 (346)
T ss_dssp EHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS--SCCBC
T ss_pred cHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC--CCccc
Confidence 99998854 4699999999999999999999999 9999999999999999999999999999876432 22345
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+||+.|||||++.+..|+.++|||||||++|||++|++||........+... . .+. .+.+ ......
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i----~-~~~-----~~~~--~~~~~~ 296 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----R-DNL-----PPRL--KNLHKV 296 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----H-HSS-----CCCC--SCGGGS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----H-cCC-----CCCC--CccccC
Confidence 678999999999999999999999999999999999999999865543332221 1 110 1111 112234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...+.+++.+||+.||++|||+.|+++
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 567889999999999999999999865
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-47 Score=420.09 Aligned_cols=250 Identities=21% Similarity=0.262 Sum_probs=206.9
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
+.++||+|+||.||+|+.. ++.||||+++... .+.+|+.++++++|||||++++++.++...++|||||++|+
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 4568999999999999986 8899999997642 23579999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC-cEEEEeccCCccccCCCCcc---
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF-QAKLADFGLSRIFPVEGGTH--- 718 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~vkL~DFGla~~~~~~~~~~--- 718 (870)
|.+++.+. ..+++.++..++.||+.||+|||++ +|+||||||+||||+.++ ++||+|||+|+.+..++...
T Consensus 137 L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 137 LGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp HHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 99999643 4699999999999999999999998 999999999999999987 69999999999764432221
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....+||+.|||||++.+..++.++|||||||++|||+||++||..........+.... . . .+ ...+
T Consensus 212 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~----~-~------~~-~~~~ 279 (336)
T 4g3f_A 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE----P-P------PI-REIP 279 (336)
T ss_dssp --CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS----C-C------GG-GGSC
T ss_pred cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC----C-C------Cc-hhcC
Confidence 223467999999999999999999999999999999999999999876655544433221 1 0 00 0122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
......+.+++.+||+.||++|||+.|+++.|...+..
T Consensus 280 ~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 33456788999999999999999999999999887643
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3e-47 Score=411.34 Aligned_cols=245 Identities=26% Similarity=0.436 Sum_probs=197.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec----CCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE----GANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~LV~ 635 (870)
.|.+.||+|+||.||+|.+. +..||+|++.... ....+.|.+|++++++++|||||++++++.. +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999986 7889999997653 3345679999999999999999999999864 34589999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-CCcEEEEeccCCccccCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-KFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~vkL~DFGla~~~~~~ 714 (870)
|||++|+|.+++.+. ..+++..+..++.||+.||+|||++ .++|+||||||+||||+. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~-- 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR-- 183 (290)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC--
T ss_pred eCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC--
Confidence 999999999999643 5799999999999999999999987 224999999999999984 7999999999998542
Q ss_pred CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.......+||+.|||||++.+ +++.++|||||||++|||+||+.||........+.+ .+..+.....+
T Consensus 184 --~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~----~i~~~~~~~~~----- 251 (290)
T 3fpq_A 184 --ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR----RVTSGVKPASF----- 251 (290)
T ss_dssp --TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH----HHTTTCCCGGG-----
T ss_pred --CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHH----HHHcCCCCCCC-----
Confidence 123346789999999998864 699999999999999999999999976543322222 12222111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+......+.+++.+||+.||++|||+.|+++
T Consensus 252 ---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 ---DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1122346889999999999999999999875
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-47 Score=416.76 Aligned_cols=245 Identities=23% Similarity=0.368 Sum_probs=209.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+++.+.||+|+||+||+|+.. ++.||||++.... ....+.+.+|+++|++++|||||++++++.+.+..++||||
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy 113 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY 113 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 456789999999999999986 8899999997643 23456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++.+. ..+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+......
T Consensus 114 ~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 114 AKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999643 4799999999999999999999999 9999999999999999999999999999987544444
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......+||+.|||||++.+..++.++||||+||++|||++|++||..........+.. .+.. .+
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~-----~~~~----------~~ 253 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII-----KLEY----------DF 253 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----HTCC----------CC
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----cCCC----------CC
Confidence 45567799999999999999999999999999999999999999998765443333221 1111 12
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVV 827 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl 827 (870)
+......+.+++.+||+.||++|||++|++
T Consensus 254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 223345688999999999999999999874
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-46 Score=423.77 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=207.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|+.. ++.||||++........+.+.+|+++|++++|||||++++++.+.+..++|||||++|
T Consensus 154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG 233 (423)
T 4fie_A 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 233 (423)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred EeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCC
Confidence 34578999999999999986 8999999998776666778999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.. ..+++.++..|+.||+.||+|||++ +|+||||||+||||+.++.+||+|||+|+.+... .....
T Consensus 234 ~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~--~~~~~ 305 (423)
T 4fie_A 234 ALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRK 305 (423)
T ss_dssp EHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS--CCCBC
T ss_pred cHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC--Ccccc
Confidence 99998853 4699999999999999999999999 9999999999999999999999999999876432 22345
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+||+.|||||++.+..|+.++|||||||++|||++|++||........+..+ ..+. .+.+ ......
T Consensus 306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i-----~~~~-----~~~~--~~~~~~ 373 (423)
T 4fie_A 306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI-----RDNL-----PPRL--KNLHKV 373 (423)
T ss_dssp CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----HHSC-----CCCC--SCTTSS
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH-----HcCC-----CCCC--cccccC
Confidence 678999999999999999999999999999999999999999865543332221 1111 1111 111233
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...+.+|+.+||+.||++|||+.|+++
T Consensus 374 s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 374 SPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 457889999999999999999999865
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-46 Score=398.91 Aligned_cols=242 Identities=22% Similarity=0.362 Sum_probs=189.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.+.||+|+||+||+|+.. ++.||||++..... ...+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy 94 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 455689999999999999975 89999999976532 3346789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+ +|+|.+++.+. ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+.... .
T Consensus 95 ~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~---~ 165 (275)
T 3hyh_A 95 A-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---G 165 (275)
T ss_dssp C-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred C-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC---C
Confidence 9 68999988643 4799999999999999999999999 999999999999999999999999999986532 2
Q ss_pred cccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
......+||+.|||||++.+..+ +.++||||+||++|||++|+.||........... .. .+.. .
T Consensus 166 ~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~----i~-~~~~----------~ 230 (275)
T 3hyh_A 166 NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----IS-NGVY----------T 230 (275)
T ss_dssp ---------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HH-HTCC----------C
T ss_pred CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH----HH-cCCC----------C
Confidence 23345789999999999998876 5799999999999999999999986543332222 11 1211 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
++......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 231 LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 12223456789999999999999999999976
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.6e-46 Score=406.04 Aligned_cols=239 Identities=25% Similarity=0.336 Sum_probs=193.9
Q ss_pred hhccccccccCcEEEEEEEE-----CCeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL-----DDKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
+++.+.||+|+||+||+|+. .++.||||+++.... .....+.+|+++|++++|||||++++++.+.+..++||
T Consensus 26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 105 (304)
T 3ubd_A 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105 (304)
T ss_dssp EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 45678999999999999986 267899999976532 23456889999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
|||++|+|.+++.+. ..+++.++..++.|++.||+|||++ +|+||||||+|||+++++++||+|||+|+.....
T Consensus 106 Ey~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 179 (304)
T 3ubd_A 106 DFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH- 179 (304)
T ss_dssp CCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC-
Confidence 999999999999643 4799999999999999999999999 9999999999999999999999999999865322
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.......+||+.|||||++.+..++.++||||+||++|||+||++||........+... . .+..
T Consensus 180 -~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i----~-~~~~---------- 243 (304)
T 3ubd_A 180 -EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI----L-KAKL---------- 243 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-HCCC----------
T ss_pred -CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHH----H-cCCC----------
Confidence 22334578999999999999999999999999999999999999999876544333322 1 1111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTM 823 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 823 (870)
.++......+.+++.+||+.||++|||+
T Consensus 244 ~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1222344678899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.2e-44 Score=391.86 Aligned_cols=247 Identities=21% Similarity=0.291 Sum_probs=186.3
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCC----------
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGA---------- 629 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~---------- 629 (870)
+++.+.||+|+||.||+|+.. ++.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 345689999999999999986 88999999976543 34567899999999999999999999986543
Q ss_pred --eEEEEEEEccCCchhhhhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEecc
Q 002887 630 --NMGLIYEFMANGNLQAHLLEDKA-DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFG 706 (870)
Q Consensus 630 --~~~LV~Ey~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFG 706 (870)
..++|||||++|+|.+++..... ...++..++.|+.||++||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCc
Confidence 36899999999999999975432 4466778899999999999999999 99999999999999999999999999
Q ss_pred CCccccCCCCcc----------ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002887 707 LSRIFPVEGGTH----------VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWV 776 (870)
Q Consensus 707 la~~~~~~~~~~----------~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~ 776 (870)
+|+.+....... ..+..+||+.|||||++.+..++.++|||||||++|||++ ||..... .... .
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~--~~~~-~ 237 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME--RVRT-L 237 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH--HHHH-H
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH--HHHH-H
Confidence 998764332111 1234579999999999999999999999999999999997 6653211 1111 1
Q ss_pred HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ......... ........+.+++.+||+.||++|||+.|+++
T Consensus 238 ~-~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 238 T-DVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp H-HHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-HHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 111111110 01233345678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.9e-42 Score=378.20 Aligned_cols=268 Identities=42% Similarity=0.719 Sum_probs=235.6
Q ss_pred cccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCchh
Q 002887 566 ERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQ 644 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~ 644 (870)
.+.||+|+||.||+|++. ++.||||++........+.+.+|++++++++||||+++++++.+....++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 478999999999999986 8899999998776667788999999999999999999999999999999999999999999
Q ss_pred hhhhhccc--ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 645 AHLLEDKA--DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 645 ~~l~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
+++..... ..++|..++.++.|+++||+|||++ +|+||||||+||++++++.+||+|||+++.............
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 200 (321)
T 2qkw_B 124 RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTV 200 (321)
T ss_dssp GGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCC
T ss_pred HHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccccc
Confidence 99865432 3599999999999999999999998 999999999999999999999999999986543333333445
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCc--cchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQ--RTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~--~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
..||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......|.......+.+..++++.+......+
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (321)
T 2qkw_B 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPE 280 (321)
T ss_dssp CEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHH
T ss_pred cCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHH
Confidence 5689999999999999999999999999999999999999976542 33456676666777777888888887777888
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
....+.+++.+|++.+|++|||+.||++.|++++..
T Consensus 281 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 281 SLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999998754
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-42 Score=386.04 Aligned_cols=259 Identities=19% Similarity=0.300 Sum_probs=201.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec------CCeEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE------GANMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~ 632 (870)
+.+.+.||+|+||.||+|+.. |+.||||+++... ....+.+.+|+++|++++|||||++++++.. ....+
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 345689999999999999986 8999999997543 2345678899999999999999999998753 36789
Q ss_pred EEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcccc
Q 002887 633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~ 712 (870)
+|||||+ |+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 136 ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 9999996 679988864 35799999999999999999999999 99999999999999999999999999998763
Q ss_pred CCC--CccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC-----
Q 002887 713 VEG--GTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD----- 784 (870)
Q Consensus 713 ~~~--~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~----- 784 (870)
... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+......+..+.........
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 321 12234567899999999998875 4699999999999999999999999877655554444332211100
Q ss_pred -----cchhcccccCC--CCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 -----IKNIVDHRLQG--DFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 -----~~~i~d~~l~~--~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....+. .+.. ..+ ......+.+|+.+||+.||++|||+.|+++
T Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 290 VGAERVRAYIQ-SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ----CHHHHHH-SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhh-cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 000000 0000 001 112356789999999999999999999876
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.4e-42 Score=380.41 Aligned_cols=282 Identities=41% Similarity=0.726 Sum_probs=244.4
Q ss_pred cccCHHHHHHHHhhc--cccccccCcEEEEEEEEC-CeeEEEEEeeccchh-hhHHHHHHHHHHHHhccccceeEEEEEe
Q 002887 551 RKFSYFDVLKITNNF--ERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQ-GYKQFQAEVELLIRAHHKNLTILVGYCD 626 (870)
Q Consensus 551 ~~~~~~dl~~~t~~f--~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 626 (870)
..+++.++..+..+| .+.||+|+||.||+|... ++.||||++...... ....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 567788888777766 479999999999999875 889999999765432 3347899999999999999999999999
Q ss_pred cCCeEEEEEEEccCCchhhhhhhccc--ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEe
Q 002887 627 EGANMGLIYEFMANGNLQAHLLEDKA--DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLAD 704 (870)
Q Consensus 627 ~~~~~~LV~Ey~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~D 704 (870)
.....++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+.++|+||||||+|||+++++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999976432 4599999999999999999999998777999999999999999999999999
Q ss_pred ccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCC----CCccchHHHHHHHHh
Q 002887 705 FGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQK----TPQRTLIGQWVSSML 780 (870)
Q Consensus 705 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~----~~~~~~l~~~~~~~~ 780 (870)
||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.. .........|+....
T Consensus 178 fg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (326)
T 3uim_A 178 FGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256 (326)
T ss_dssp CSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred CccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence 9999876322 22334456699999999999998999999999999999999999999962 334456778888888
Q ss_pred hcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 781 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
.......+.+..+...........+.+++.+|++.+|++|||+.||+++|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 88888888888888888889999999999999999999999999999999874
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.9e-41 Score=378.39 Aligned_cols=256 Identities=22% Similarity=0.304 Sum_probs=194.1
Q ss_pred hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
+.+.+.||+|+||+||+|+.+ ++.||||++.... ...++.+|+++|+++ +||||+++++++.+.++.++|||
T Consensus 23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE 100 (361)
T 4f9c_A 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP 100 (361)
T ss_dssp CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence 345689999999999999863 5789999987653 235678999999998 69999999999999999999999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC-CcEEEEeccCCccccCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK-FQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~vkL~DFGla~~~~~~~ 715 (870)
|+++|+|.+++. .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+......
T Consensus 101 ~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 101 YLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp CCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred CCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 999999999883 588999999999999999999999 99999999999999877 799999999998653221
Q ss_pred C--------------------------ccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCc
Q 002887 716 G--------------------------THVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQ 768 (870)
Q Consensus 716 ~--------------------------~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~ 768 (870)
. .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 1 0112345799999999999875 589999999999999999999999965543
Q ss_pred c-chHHHHHHHH-----------hhc----------CCcchhcc---------cccC---------CCCCHHHHHHHHHH
Q 002887 769 R-TLIGQWVSSM-----------LAR----------GDIKNIVD---------HRLQ---------GDFDTNTVWKAVEI 808 (870)
Q Consensus 769 ~-~~l~~~~~~~-----------~~~----------~~~~~i~d---------~~l~---------~~~~~~~~~~l~~l 808 (870)
. ..+..+..-. ... ........ +.+. .........++.+|
T Consensus 253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence 2 2222221100 000 00000000 0000 00011233567899
Q ss_pred HHHccccCCCCCCCHHHHHH
Q 002887 809 ALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 809 ~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.+||+.||++|||++|+++
T Consensus 333 l~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHCcCChhHCcCHHHHhc
Confidence 99999999999999999875
No 20
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.3e-40 Score=363.17 Aligned_cols=280 Identities=36% Similarity=0.667 Sum_probs=234.6
Q ss_pred ccccCHHHHHHHHhhcc--------ccccccCcEEEEEEEECCeeEEEEEeeccc----hhhhHHHHHHHHHHHHhcccc
Q 002887 550 NRKFSYFDVLKITNNFE--------RVLGKGGFGTVYHGYLDDKQVAVKMLSSSS----VQGYKQFQAEVELLIRAHHKN 617 (870)
Q Consensus 550 ~~~~~~~dl~~~t~~f~--------~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l~H~n 617 (870)
...|++.++.+++.+|. +.||+|+||.||+|..+++.||||++.... ....+.+.+|++++++++|||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 36789999999999886 569999999999999999999999987532 234567899999999999999
Q ss_pred ceeEEEEEecCCeEEEEEEEccCCchhhhhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC
Q 002887 618 LTILVGYCDEGANMGLIYEFMANGNLQAHLLEDK-ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE 696 (870)
Q Consensus 618 Iv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~ 696 (870)
|+++++++.+....++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+||++++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999986543 35699999999999999999999998 9999999999999999
Q ss_pred CCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHH
Q 002887 697 KFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWV 776 (870)
Q Consensus 697 ~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~ 776 (870)
++.+||+|||+++...............|++.|+|||.+.+ .++.++||||||+++|||++|++||........+..+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 99999999999987643333333445679999999998864 58899999999999999999999998766555444444
Q ss_pred HHHhhc-CCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 777 SSMLAR-GDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 777 ~~~~~~-~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
...... ..+.+.+++.+. .........+.+++.+|++.+|++|||+.||++.|+++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCS-CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhcccccc-ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 433322 223445555442 345677888999999999999999999999999999864
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.2e-41 Score=400.04 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=207.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|+.. ++.||+|++........+.+.+|+++|++++|||||++++++.+....++|||||++
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~g 238 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 238 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCC
Confidence 356689999999999999986 889999999887666677899999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC--CcEEEEeccCCccccCCCCcc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK--FQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~--~~vkL~DFGla~~~~~~~~~~ 718 (870)
|+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+++.+... .
T Consensus 239 g~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~---~ 311 (573)
T 3uto_A 239 GELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---Q 311 (573)
T ss_dssp CBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT---S
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC---C
Confidence 9999988643 34799999999999999999999999 99999999999999854 89999999999976322 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....+||+.|||||++.+..++.++||||+||++|||++|++||.+......+... . .+.. .+.....
T Consensus 312 ~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i----~-~~~~------~~~~~~~ 380 (573)
T 3uto_A 312 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV----K-SCDW------NMDDSAF 380 (573)
T ss_dssp EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH----H-TTCC------CCCSGGG
T ss_pred ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH----H-hCCC------CCCcccc
Confidence 334568999999999999999999999999999999999999999876554433222 1 1110 0000011
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+|+.+||+.||++|||+.|+++
T Consensus 381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 123456789999999999999999999986
No 22
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.8e-40 Score=361.96 Aligned_cols=256 Identities=31% Similarity=0.489 Sum_probs=203.2
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|+..++.||||++.... ....+++.+|++++++++||||+++++++......++||||+++|
T Consensus 40 ~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 446799999999999999999999999997653 334567899999999999999999999999999999999999999
Q ss_pred chhhhhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCCC--ceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 642 NLQAHLLEDKA-DTLCWERRLQIASESAQGLEYLHNGCKPP--IVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 642 sL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
+|.+++..... ..+++..++.++.|+++||+|||+. + |+||||||+|||+++++.+||+|||+++..... ..
T Consensus 120 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--~~ 194 (309)
T 3p86_A 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST--FL 194 (309)
T ss_dssp BHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc--cc
Confidence 99999875432 3599999999999999999999998 7 999999999999999999999999999754221 22
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...... ....+
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~----~~~~~~---------~~~~~ 261 (309)
T 3p86_A 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA----VGFKCK---------RLEIP 261 (309)
T ss_dssp -------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH----HHHSCC---------CCCCC
T ss_pred ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhcCC---------CCCCC
Confidence 23456799999999999999999999999999999999999999986554332211 111110 11222
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
......+.+++.+|++.+|++|||+.|+++.|++++...
T Consensus 262 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 334457889999999999999999999999999877543
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.9e-40 Score=368.12 Aligned_cols=257 Identities=28% Similarity=0.455 Sum_probs=213.3
Q ss_pred hccccccccCcEEEEEEEEC---------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMG 632 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 632 (870)
.+.+.||+|+||.||+|... +..||||+++... ....+.+.+|+++++++ +||||++++++|......+
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ 163 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY 163 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCE
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEE
Confidence 45679999999999999862 3569999997653 34457799999999999 8999999999999999999
Q ss_pred EEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887 633 LIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF 698 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 698 (870)
+||||+++|+|.+++..... ..+++..++.++.|+++||+|||++ +|+||||||+|||++.++
T Consensus 164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 240 (370)
T 2psq_A 164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENN 240 (370)
T ss_dssp EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCC
Confidence 99999999999999976432 3589999999999999999999998 999999999999999999
Q ss_pred cEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002887 699 QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVS 777 (870)
Q Consensus 699 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~ 777 (870)
.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...........
T Consensus 241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~--- 317 (370)
T 2psq_A 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL--- 317 (370)
T ss_dssp CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH---
T ss_pred CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH---
Confidence 999999999987643333333344567889999999999999999999999999999999 9999987654433221
Q ss_pred HHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 778 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
+..+. ....+......+.+++.+||+.+|++||++.|+++.|++++...
T Consensus 318 --~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 318 --LKEGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp --HHTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --HhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111 11122334567889999999999999999999999999987653
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.2e-40 Score=388.68 Aligned_cols=244 Identities=25% Similarity=0.348 Sum_probs=196.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHH---HHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAE---VELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~E---i~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|+.. ++.||||++.+... .......+| +.+++.++|||||++++++.+.+..++||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 45689999999999999986 88999999976432 122233344 55566678999999999999999999999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
|||+||+|.++|.+. ..+++..+..++.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.+...
T Consensus 272 Ey~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~- 345 (689)
T 3v5w_A 272 DLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK- 345 (689)
T ss_dssp CCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred ecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCC-
Confidence 999999999999653 4699999999999999999999998 9999999999999999999999999999876332
Q ss_pred CccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.....+||+.|||||++.. ..|+.++|+||+||++|||++|++||........ .+....... ..
T Consensus 346 ---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~-~~i~~~i~~-~~---------- 410 (689)
T 3v5w_A 346 ---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLT-MA---------- 410 (689)
T ss_dssp ---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH-HHHHHHHHH-CC----------
T ss_pred ---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhhcC-CC----------
Confidence 2345689999999999975 5799999999999999999999999975433221 121222111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPT-----MNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~ 828 (870)
..++......+.+|+.+||+.||++|++ +.||.+
T Consensus 411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1122334567889999999999999998 677754
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=357.04 Aligned_cols=257 Identities=27% Similarity=0.388 Sum_probs=209.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|... ++.||+|++........+.|.+|++++++++||||+++++++.++...++||||+++|
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 92 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCC
Confidence 34579999999999999986 8899999997776677788999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc---
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH--- 718 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~--- 718 (870)
+|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.........
T Consensus 93 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 93 TLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp BHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 999998653 35699999999999999999999998 99999999999999999999999999998763322111
Q ss_pred ---------ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 719 ---------VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 719 ---------~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
......||+.|+|||++.+..++.++||||||+++|||++|..|+........... .......
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--------~~~~~~~ 240 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--------LNVRGFL 240 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS--------BCHHHHH
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh--------hhhhccc
Confidence 11145799999999999999999999999999999999999999875432111000 0000011
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
+... +......+.+++.+|++.+|++|||+.|+++.|+++...
T Consensus 241 ~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 241 DRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp HHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 122234578999999999999999999999999987643
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7e-40 Score=360.70 Aligned_cols=264 Identities=26% Similarity=0.369 Sum_probs=207.7
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC----eEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----NMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|++.++.||||++..... ....++.|+.++++++||||+++++++.... ..++||||++
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~ 105 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHE 105 (322)
T ss_dssp EEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCT
T ss_pred hhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCC
Confidence 3457999999999999999999999999976533 3345677899999999999999999997744 4799999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC-------CCCCceeCCCCCCCEEEcCCCcEEEEeccCCcccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG-------CKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~-------~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~ 712 (870)
+|+|.+++.. ..+++..+..++.|+++||+|||+. ++++|+||||||+|||++.++.+||+|||+++.+.
T Consensus 106 ~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~ 182 (322)
T 3soc_A 106 KGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182 (322)
T ss_dssp TCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEEC
T ss_pred CCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccc
Confidence 9999999954 4599999999999999999999975 23489999999999999999999999999998765
Q ss_pred CCCCccccccccCCCCccCccccccC-----CCCccchHHHHHHHHHHHHhCCCCCCCCCccc------------hHHHH
Q 002887 713 VEGGTHVSTTVVGTPGYLDPEYYISN-----RLTEKSDVYSFGVVLLELITGQPVIQKTPQRT------------LIGQW 775 (870)
Q Consensus 713 ~~~~~~~~~~~~gt~~y~APE~~~~~-----~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~------------~l~~~ 775 (870)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+
T Consensus 183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (322)
T 3soc_A 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDM 262 (322)
T ss_dssp TTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHH
T ss_pred cccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhh
Confidence 44333334456799999999999863 45678999999999999999999997643211 11111
Q ss_pred HHHHhhcCCcchhcccccCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 776 VSSMLARGDIKNIVDHRLQGDF-DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
........ . .+.+.... .......+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 263 ~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 263 QEVVVHKK-K----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHTTSC-C----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhccc-C----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111 1 11111111 224567799999999999999999999999999987653
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.2e-39 Score=352.61 Aligned_cols=245 Identities=22% Similarity=0.339 Sum_probs=205.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|... ++.||||++........+.+.+|+.++++++||||+++++++..++..++||||+++|
T Consensus 23 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (297)
T 3fxz_A 23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102 (297)
T ss_dssp CCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCC
Confidence 34578999999999999864 8899999998776666778899999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.+ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++....... ....
T Consensus 103 ~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 174 (297)
T 3fxz_A 103 SLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRS 174 (297)
T ss_dssp BHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--CCBC
T ss_pred CHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--cccC
Confidence 99999854 3589999999999999999999998 99999999999999999999999999998764322 2234
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............ ...+.. ........
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~----~~~~~~--------~~~~~~~~ 242 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI----ATNGTP--------ELQNPEKL 242 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHHCSC--------CCSCGGGS
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhCCCC--------CCCCcccc
Confidence 567999999999999999999999999999999999999999765543322221 111110 01112234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 243 SAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 556889999999999999999999986
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.7e-39 Score=354.12 Aligned_cols=261 Identities=21% Similarity=0.285 Sum_probs=213.4
Q ss_pred ccccccCHHHHHHHHhh------------ccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh
Q 002887 548 LENRKFSYFDVLKITNN------------FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA 613 (870)
Q Consensus 548 ~~~~~~~~~dl~~~t~~------------f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l 613 (870)
.....+++.++.+++.. ..+.||+|+||.||+|+.. ++.||||++........+.+.+|+.+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 20 FQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY 99 (321)
T ss_dssp -----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC
T ss_pred ecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC
Confidence 34456788888887754 2358999999999999985 889999999877666677899999999999
Q ss_pred ccccceeEEEEEecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL 693 (870)
Q Consensus 614 ~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL 693 (870)
+||||+++++++......++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 999999999999999999999999999999998853 4689999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHH
Q 002887 694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIG 773 (870)
Q Consensus 694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~ 773 (870)
++.++.+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~ 251 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 251 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred ECCCCcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999998764321 22345679999999999999999999999999999999999999997654332221
Q ss_pred HHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 774 QWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 774 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. .. ... .+.+ .........+.+++.+|++.+|++|||+.|+++
T Consensus 252 ~----~~-~~~-----~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 252 R----LR-DSP-----PPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp H----HH-HSS-----CCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H----Hh-cCC-----CCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 11 111 1111 111233456889999999999999999999976
No 29
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3e-39 Score=360.29 Aligned_cols=258 Identities=29% Similarity=0.409 Sum_probs=210.0
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCe-EE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGAN-MG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~-~~ 632 (870)
+.+.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|++++.++ +||||+++++++.+... .+
T Consensus 24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~ 103 (359)
T 3vhe_A 24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 103 (359)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceE
Confidence 345689999999999999842 4789999998653 33456799999999999 89999999999987554 89
Q ss_pred EEEEEccCCchhhhhhhccc------------------------------------------------------------
Q 002887 633 LIYEFMANGNLQAHLLEDKA------------------------------------------------------------ 652 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~------------------------------------------------------------ 652 (870)
+||||+++|+|.+++.....
T Consensus 104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (359)
T 3vhe_A 104 VIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE 183 (359)
T ss_dssp EEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------
T ss_pred EEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccccc
Confidence 99999999999999876432
Q ss_pred ----ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccccccCCCC
Q 002887 653 ----DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPG 728 (870)
Q Consensus 653 ----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~ 728 (870)
..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++...............||+.
T Consensus 184 ~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~ 260 (359)
T 3vhe_A 184 DLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 260 (359)
T ss_dssp CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred chhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence 1289999999999999999999999 999999999999999999999999999987644443344455678999
Q ss_pred ccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHH
Q 002887 729 YLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVE 807 (870)
Q Consensus 729 y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~ 807 (870)
|+|||++.+..++.++|||||||++|||++ |+.||............+ ..+.. ..........+.+
T Consensus 261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~----~~~~~---------~~~~~~~~~~l~~ 327 (359)
T 3vhe_A 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTR---------MRAPDYTTPEMYQ 327 (359)
T ss_dssp GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH----HHTCC---------CCCCTTCCHHHHH
T ss_pred eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH----HcCCC---------CCCCCCCCHHHHH
Confidence 999999999999999999999999999998 999998765433332221 11111 1112233456889
Q ss_pred HHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 808 IALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 808 l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
++.+|++.+|++|||+.||++.|++++..
T Consensus 328 li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 328 TMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999997743
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=357.09 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=208.1
Q ss_pred hccccccccCcEEEEEEEEC-----CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|.+. +..||||++... .....+.|.+|++++++++||||+++++++.++...++||||
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 131 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEY 131 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEEC
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeC
Confidence 44578999999999999984 456999999865 334457799999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 132 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 132 MENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp CTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred CCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 9999999998543 34699999999999999999999998 9999999999999999999999999999876433221
Q ss_pred -cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 718 -HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 718 -~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||............ . .+ ...
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~-~~---------~~~ 273 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV----E-EG---------YRL 273 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH----H-TT---------CCC
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH----H-cC---------CCC
Confidence 12233456788999999999999999999999999999999 99999765543322221 1 11 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.........+.+++.+|++.+|++|||+.||+++|++++..
T Consensus 274 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 274 PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 22234456788999999999999999999999999997643
No 31
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=364.35 Aligned_cols=259 Identities=30% Similarity=0.451 Sum_probs=213.9
Q ss_pred hhccccccccCcEEEEEEEEC---------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANM 631 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 631 (870)
..+.+.||+|+||.||+|+.. +..||||++.... ....+++.+|+++++++ +||||+++++++......
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 150 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence 345689999999999999863 2579999997653 34457789999999999 999999999999999999
Q ss_pred EEEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887 632 GLIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK 697 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 697 (870)
++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+|||++++
T Consensus 151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTED 227 (382)
T ss_dssp EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTT
T ss_pred EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcCC
Confidence 999999999999999976542 4599999999999999999999998 99999999999999999
Q ss_pred CcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002887 698 FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWV 776 (870)
Q Consensus 698 ~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~ 776 (870)
+.+||+|||+++...............+|+.|+|||++.+..++.++|||||||+++||++ |+.||..........
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~--- 304 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--- 304 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH---
Confidence 9999999999987644333333445567889999999999999999999999999999999 999997655332221
Q ss_pred HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhH
Q 002887 777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEI 838 (870)
Q Consensus 777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~ 838 (870)
.+..+. ...........+.+++.+||+.+|++|||+.||++.|++++....
T Consensus 305 --~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 305 --LLKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp --HHHTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred --HHHcCC---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 111121 111122344578899999999999999999999999999876543
No 32
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.3e-39 Score=371.10 Aligned_cols=250 Identities=27% Similarity=0.427 Sum_probs=209.7
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC-eEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA-NMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~-~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||+|.+.++.||||+++... ..+.|.+|++++++++||||+++++++.+.. ..++||||+++|+
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 345799999999999999999999999998654 4578999999999999999999999987665 7899999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++.......+++..++.++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++..... ...
T Consensus 274 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~~ 345 (450)
T 1k9a_A 274 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDT 345 (450)
T ss_dssp HHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----ccC
Confidence 99999876555689999999999999999999998 9999999999999999999999999999854211 123
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||........... +..+. ....+...
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-----i~~~~---------~~~~p~~~ 411 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGY---------KMDAPDGC 411 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH-----HHTTC---------CCCCCTTC
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCC---------CCCCCCcC
Confidence 367889999999999999999999999999999998 9999987654433221 11221 11223345
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
+..+.+++.+||+.+|++|||+.|+++.|+++...+
T Consensus 412 ~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 412 PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 567889999999999999999999999999876543
No 33
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-39 Score=349.17 Aligned_cols=257 Identities=26% Similarity=0.335 Sum_probs=200.9
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHH--hccccceeEEEEEec----CCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR--AHHKNLTILVGYCDE----GANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~----~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.+++.||||++.... ...+..|.+++.. ++||||+++++++.. ....++||||
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~ 87 (301)
T 3q4u_A 11 TLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHY 87 (301)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred EEEEeeccCCCcEEEEEEECCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhh
Confidence 456899999999999999999999999986543 3456677777777 799999999998644 3458899999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHH--------hCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH--------NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~ 709 (870)
+++|+|.+++. ...+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+++
T Consensus 88 ~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 88 HEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp CTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999994 346999999999999999999999 66 99999999999999999999999999998
Q ss_pred cccCCCCcc--ccccccCCCCccCccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCCCCccc-
Q 002887 710 IFPVEGGTH--VSTTVVGTPGYLDPEYYISN------RLTEKSDVYSFGVVLLELITG----------QPVIQKTPQRT- 770 (870)
Q Consensus 710 ~~~~~~~~~--~~~~~~gt~~y~APE~~~~~------~~~~ksDVwS~GvvL~elltG----------~~p~~~~~~~~- 770 (870)
......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 664332221 12334799999999999876 455799999999999999999 88886543222
Q ss_pred hHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 771 LIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 771 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
............+....+.. ..........+.+++.+||+.+|++|||+.||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 22222222211111111100 011235678899999999999999999999999999874
No 34
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=364.69 Aligned_cols=257 Identities=27% Similarity=0.407 Sum_probs=210.0
Q ss_pred hccccccccCcEEEEEEEEC-------CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|.+. ++.||||++... ......++.+|+.++++++||||+++++++......++||
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 153 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILL 153 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEE
Confidence 45688999999999999953 568999999754 3344567899999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC---cEEEEeccC
Q 002887 636 EFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---QAKLADFGL 707 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~vkL~DFGl 707 (870)
||+++|+|.+++..... ..+++..++.++.|+++||+|||++ +|+||||||+|||++.++ .+||+|||+
T Consensus 154 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG~ 230 (367)
T 3l9p_A 154 ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230 (367)
T ss_dssp ECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred EeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence 99999999999976432 4599999999999999999999999 999999999999999555 599999999
Q ss_pred CccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcc
Q 002887 708 SRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIK 786 (870)
Q Consensus 708 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~ 786 (870)
++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||........... .. .+.
T Consensus 231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~----i~-~~~-- 303 (367)
T 3l9p_A 231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEF----VT-SGG-- 303 (367)
T ss_dssp HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----HH-TTC--
T ss_pred ccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HH-cCC--
Confidence 986533322333345578999999999999999999999999999999998 9999986554332211 11 111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 787 NIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 787 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
...........+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 304 -------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 304 -------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11112234456889999999999999999999999999876543
No 35
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.7e-39 Score=355.69 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=202.1
Q ss_pred hccccccccCcEEEEEEEEC--Ce----eEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DK----QVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~----~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|++. ++ .||+|.+.... ....+++.+|++++++++||||++++++|.... .++|+|
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e 96 (327)
T 3poz_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ 96 (327)
T ss_dssp EEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEE
T ss_pred ccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEE
Confidence 34579999999999999974 33 36888876543 345578999999999999999999999998754 789999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 172 (327)
T 3poz_A 97 LMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred ecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence 999999999987543 5689999999999999999999998 999999999999999999999999999987654443
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... .. +..+. ..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-~~----~~~~~---------~~ 238 (327)
T 3poz_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SI----LEKGE---------RL 238 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HH----HHTTC---------CC
T ss_pred cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-HH----HHcCC---------CC
Confidence 333445567889999999999999999999999999999999 99999876544322 11 11111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.........+.+++.+||+.+|++||++.|++++|+.+...
T Consensus 239 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 22233455788999999999999999999999999987643
No 36
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-39 Score=366.73 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=207.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|.+. ++.||||+++... ....++|.+|++++++++||||++++++|......++||||+++
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 196 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCC
Confidence 45689999999999999986 8899999987653 23456789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++...........
T Consensus 197 g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 197 GDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 9999998643 34689999999999999999999998 9999999999999999999999999999864221111111
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
....+++.|+|||.+.++.++.++|||||||++|||++ |+.||........ ...+..+. ....+.
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----~~~~~~~~---------~~~~~~ 338 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----REFVEKGG---------RLPCPE 338 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----HHHHHTTC---------CCCCCT
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHcCC---------CCCCCC
Confidence 12235678999999999999999999999999999998 9999986543321 11222221 111223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
..+..+.+++.+||+.+|++|||+.+|++.|+++..
T Consensus 339 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 345678899999999999999999999999998754
No 37
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.7e-39 Score=354.65 Aligned_cols=243 Identities=23% Similarity=0.397 Sum_probs=203.4
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++......++||||++
T Consensus 18 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~ 97 (328)
T 3fe3_A 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYAS 97 (328)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCC
Confidence 34579999999999999984 8899999997653 3445678899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...... ..
T Consensus 98 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~---~~ 169 (328)
T 3fe3_A 98 GGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GK 169 (328)
T ss_dssp TCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS---CG
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC---Cc
Confidence 99999998654 4689999999999999999999998 9999999999999999999999999999866322 23
Q ss_pred cccccCCCCccCccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 720 STTVVGTPGYLDPEYYISNRLT-EKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~~~-~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....||+.|+|||++.+..+. .++||||+||++|||++|+.||........... .. .+.. ..+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----i~-~~~~----------~~p 234 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER----VL-RGKY----------RIP 234 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HH-HCCC----------CCC
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HH-hCCC----------CCC
Confidence 4556899999999999988765 799999999999999999999987554332221 11 1111 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
......+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 235 FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2234567899999999999999999999763
No 38
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.4e-38 Score=348.00 Aligned_cols=257 Identities=29% Similarity=0.492 Sum_probs=202.5
Q ss_pred hhccccccccCcEEEEEEEECCeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|...+ .+|+|+++.. .....+.+.+|++++++++||||+++++++.. ...++||||+++
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~~~~ 115 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEG 115 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSS
T ss_pred eEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEecCCC
Confidence 4456899999999999998765 4889988754 33445789999999999999999999998754 568899999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++...........
T Consensus 116 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 191 (307)
T 3lb7_A 116 SSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV 191 (307)
T ss_dssp CBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----------
T ss_pred CcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccc
Confidence 9999988643 35799999999999999999999998 9999999999999999999999999999865433333334
Q ss_pred ccccCCCCccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 721 TTVVGTPGYLDPEYYI---SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~---~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
....||+.|+|||++. +..++.++|||||||++|||++|+.||............+...... +.+ ...
T Consensus 192 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~--------~~~-~~~ 262 (307)
T 3lb7_A 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS--------PDL-SKL 262 (307)
T ss_dssp --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCC--------CCS-TTS
T ss_pred cCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCC--------cch-hhh
Confidence 4567999999999986 5668899999999999999999999998765443332222111111 111 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
.......+.+++.+|++.+|++||++.||++.|+.+.
T Consensus 263 ~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 2234567889999999999999999999999998764
No 39
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.4e-39 Score=348.46 Aligned_cols=260 Identities=27% Similarity=0.427 Sum_probs=205.6
Q ss_pred hhccccccccCcEEEEEEEE------CCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec--CCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL------DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE--GANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--~~~~~LV 634 (870)
+.+.+.||+|+||.||+|++ .++.||||++........+.+.+|++++++++||||+++++++.. ....++|
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 91 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI 91 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence 34568999999999999985 378999999988776777889999999999999999999999854 3568999
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
|||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 92 MEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 99999999999986543 4699999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCc-cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc-----------chHHHHHHHHhhc
Q 002887 715 GGT-HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR-----------TLIGQWVSSMLAR 782 (870)
Q Consensus 715 ~~~-~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~-----------~~l~~~~~~~~~~ 782 (870)
... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ............
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 246 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK- 246 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-
Confidence 221 1223345777899999999999999999999999999999999988643211 000001111111
Q ss_pred CCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 783 GDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 783 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
.......+......+.+++.+||+.+|++|||+.|++++|+++..
T Consensus 247 --------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 247 --------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp --------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 111122233455678999999999999999999999999998753
No 40
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1e-38 Score=348.64 Aligned_cols=258 Identities=26% Similarity=0.380 Sum_probs=213.6
Q ss_pred hhccccccccCcEEEEEEEE-------CCeeEEEEEeeccch-hhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSSV-QGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~-------~~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+|+. .++.||||++..... ...+.+.+|+++++++ +||||+++++++......++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 104 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 104 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEE
Confidence 34568999999999999985 257899999986533 3457789999999999 99999999999999999999
Q ss_pred EEEEccCCchhhhhhhccc----------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887 634 IYEFMANGNLQAHLLEDKA----------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK 697 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 697 (870)
||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||+++++
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETT
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCC
Confidence 9999999999999876542 2489999999999999999999998 99999999999999999
Q ss_pred CcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002887 698 FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWV 776 (870)
Q Consensus 698 ~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~ 776 (870)
+.+||+|||+++...............+++.|+|||++.+..++.++||||||++++||++ |+.||..........+..
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 261 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence 9999999999987654433333344567889999999999999999999999999999999 999998765443333222
Q ss_pred HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.. +. ...........+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 262 ~~----~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 KE----GF---------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HH----TC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc----CC---------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 21 11 1111223346788999999999999999999999999987643
No 41
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.4e-39 Score=343.63 Aligned_cols=252 Identities=26% Similarity=0.436 Sum_probs=208.6
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||+|... ++.||+|++..... ..+++.+|++++++++||||+++++++.+....++||||+++|+
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (269)
T 4hcu_A 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 91 (269)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCc
Confidence 45679999999999999985 88899999986543 34678999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..... .......
T Consensus 92 L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~ 166 (269)
T 4hcu_A 92 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTG 166 (269)
T ss_dssp HHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHSTTS
T ss_pred HHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc-ccccccC
Confidence 99998653 34689999999999999999999998 9999999999999999999999999999865321 1112234
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+++.|+|||++.+..++.++||||+|++++||++ |+.||............ . .+ .....+...
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~----~-~~---------~~~~~~~~~ 232 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----S-TG---------FRLYKPRLA 232 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH----H-TT---------CCCCCCTTS
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH----h-cC---------ccCCCCCcC
Confidence 456788999999999999999999999999999999 99999865543322221 1 11 011112223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 233 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 233 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999764
No 42
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3e-39 Score=363.25 Aligned_cols=255 Identities=25% Similarity=0.415 Sum_probs=198.1
Q ss_pred hccccccccCcEEEEEEEEC-----CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. +..||||+++.. .....+.|.+|++++++++||||+++++++.+....++||||
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 127 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEY 127 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeC
Confidence 44679999999999999864 567999999765 334456799999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ...+++.+++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 128 ~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 128 MENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp CTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 9999999998643 35699999999999999999999998 9999999999999999999999999999876432211
Q ss_pred c-ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 718 H-VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 718 ~-~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
. ......+++.|+|||++.+..++.++|||||||++|||++ |+.||........... +..+ ...
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~-----i~~~---------~~~ 269 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-----VDEG---------YRL 269 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH-----HHTT---------EEC
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcC---------CCC
Confidence 1 1122345778999999999999999999999999999998 9999976554322211 1111 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.........+.+++.+|++.+|++||++.||+++|++++..
T Consensus 270 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 22234456788999999999999999999999999998654
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=357.99 Aligned_cols=255 Identities=29% Similarity=0.453 Sum_probs=209.7
Q ss_pred hccccccccCcEEEEEEEECC-------eeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLDD-------KQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~-------~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|+..+ +.||||+++... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 129 (343)
T 1luf_A 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF 129 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEE
Confidence 345789999999999999853 789999998653 334567999999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhcc----------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887 636 EFMANGNLQAHLLEDK----------------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL 693 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL 693 (870)
||+++|+|.+++.... ...+++.+++.++.|+++||+|||++ +|+||||||+|||
T Consensus 130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl 206 (343)
T 1luf_A 130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL 206 (343)
T ss_dssp ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence 9999999999997642 15689999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchH
Q 002887 694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLI 772 (870)
Q Consensus 694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l 772 (870)
+++++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.........
T Consensus 207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 286 (343)
T 1luf_A 207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 286 (343)
T ss_dssp ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHH
Confidence 99999999999999986533222223344568899999999999999999999999999999999 99999765433222
Q ss_pred HHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 773 GQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 773 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
. .+..+... ..+......+.+++.+|++.+|++||++.||++.|+++..
T Consensus 287 ~-----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 287 Y-----YVRDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp H-----HHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred H-----HHhCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 1 12222111 1122344578899999999999999999999999998764
No 44
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.2e-39 Score=342.62 Aligned_cols=250 Identities=27% Similarity=0.449 Sum_probs=195.5
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccch----hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV----QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~----~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|.+.++.||||++..... ...+.+.+|++++++++||||+++++++......++||||++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 10 TLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 4567999999999999999999999999876432 234678999999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC--------CCcEEEEeccCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE--------KFQAKLADFGLSRIF 711 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~--------~~~vkL~DFGla~~~ 711 (870)
+++|.+++. ...+++..+..++.|+++||+|||++...+|+||||||+||+++. ++.+||+|||+++..
T Consensus 90 ~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~ 166 (271)
T 3dtc_A 90 GGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166 (271)
T ss_dssp TEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC----
T ss_pred CCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccc
Confidence 999999884 457899999999999999999999982223999999999999986 678999999999865
Q ss_pred cCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccc
Q 002887 712 PVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDH 791 (870)
Q Consensus 712 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 791 (870)
... ......|++.|+|||.+.+..++.++||||||++++||++|+.||........... ....
T Consensus 167 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--------- 229 (271)
T 3dtc_A 167 HRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYG----VAMN--------- 229 (271)
T ss_dssp -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH----HHTS---------
T ss_pred ccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHh----hhcC---------
Confidence 322 12245789999999999999999999999999999999999999986553322211 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 792 RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 792 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
.............+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111122334456788999999999999999999999999863
No 45
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=345.40 Aligned_cols=266 Identities=22% Similarity=0.295 Sum_probs=212.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCC--eEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA--NMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 91 (319)
T 4euu_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (319)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCC
Confidence 45679999999999999986 8899999997654 234567889999999999999999999997655 789999999
Q ss_pred cCCchhhhhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE----cCCCcEEEEeccCCccccC
Q 002887 639 ANGNLQAHLLEDKA-DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL----NEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 639 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~vkL~DFGla~~~~~ 713 (870)
++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~ 168 (319)
T 4euu_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (319)
T ss_dssp TTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT
T ss_pred CCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC
Confidence 99999999976433 3499999999999999999999999 99999999999999 8888999999999987643
Q ss_pred CCCccccccccCCCCccCccccc--------cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC-
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYI--------SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD- 784 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~--------~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~- 784 (870)
.. ......||+.|+|||++. +..++.++|||||||++|||++|+.||..........+..........
T Consensus 169 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~ 245 (319)
T 4euu_A 169 DE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (319)
T ss_dssp TC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred CC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence 22 223457999999999986 467899999999999999999999999765543333333333332211
Q ss_pred --cchhc---------ccc--cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 785 --IKNIV---------DHR--LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 785 --~~~i~---------d~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...+. ... ............+.+++.+||+.||++|||+.|+++...+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred ccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 11000 001 1123345677889999999999999999999999999987543
No 46
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=357.51 Aligned_cols=245 Identities=21% Similarity=0.349 Sum_probs=195.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++......++||||+++
T Consensus 13 ~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 92 (347)
T 3zgw_A 13 ELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92 (347)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 45689999999999999974 88999999976542 3456789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++...... .....
T Consensus 93 g~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~-~~~~~ 166 (347)
T 3zgw_A 93 GELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN-KDYHL 166 (347)
T ss_dssp CBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC-CCccc
Confidence 9999998643 4699999999999999999999998 9999999999999999999999999998765322 22223
Q ss_pred ccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 721 TTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
....||+.|+|||++.+..+ +.++||||+||++|||++|+.||............ . .+.. ..+.
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i----~-~~~~----------~~p~ 231 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKI----M-RGKY----------DVPK 231 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-HTCC----------CCCT
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----H-cCCC----------CCCC
Confidence 45679999999999988775 89999999999999999999999865443322221 1 1111 1122
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
.....+.+++.+|++.||++|||+.|+++.
T Consensus 232 ~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 232 WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 234567789999999999999999999864
No 47
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.6e-39 Score=341.67 Aligned_cols=254 Identities=22% Similarity=0.378 Sum_probs=208.8
Q ss_pred hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
+.+.+.||+|+||.||+|... +..||+|++..... ..+++.+|++++.+++||||+++++++.+....++||||++++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (268)
T 3sxs_A 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88 (268)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred eeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCC
Confidence 345679999999999999987 66899999976543 3467899999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ......
T Consensus 89 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~~ 163 (268)
T 3sxs_A 89 CLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD-QYVSSV 163 (268)
T ss_dssp BHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT-CEEECC
T ss_pred cHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh-hhhccc
Confidence 999998653 34699999999999999999999998 9999999999999999999999999999865332 222223
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
...+++.|+|||.+.+..++.++||||||++++||++ |+.||............ . .+. ....+..
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~-~~~---------~~~~~~~ 229 (268)
T 3sxs_A 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV----S-QGH---------RLYRPHL 229 (268)
T ss_dssp SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH----H-TTC---------CCCCCTT
T ss_pred CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH----H-cCC---------CCCCCCc
Confidence 4456778999999998899999999999999999999 99999865543322221 1 111 0011122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
....+.+++.+|++.+|++|||+.|+++.|+.+...
T Consensus 230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 345688999999999999999999999999987654
No 48
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.6e-39 Score=354.65 Aligned_cols=258 Identities=28% Similarity=0.396 Sum_probs=210.1
Q ss_pred hhccccccccCcEEEEEEEE-------CCeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL-------DDKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~-------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+|.. .++.||||++.... ....+.+.+|+.++.++ +||||+++++++......++
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 126 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence 34568999999999999996 25679999997643 33457799999999999 99999999999999999999
Q ss_pred EEEEccCCchhhhhhhccc---------------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCE
Q 002887 634 IYEFMANGNLQAHLLEDKA---------------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANI 692 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NI 692 (870)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||
T Consensus 127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NI 203 (344)
T 1rjb_A 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNV 203 (344)
T ss_dssp EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGE
T ss_pred EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhE
Confidence 9999999999999976432 3489999999999999999999998 999999999999
Q ss_pred EEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccch
Q 002887 693 LLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTL 771 (870)
Q Consensus 693 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~ 771 (870)
|++.++.+||+|||++................||+.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus 204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 283 (344)
T 1rjb_A 204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283 (344)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence 999999999999999987654433333445567889999999999999999999999999999998 9999987654443
Q ss_pred HHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 772 IGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 772 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
....+ ..+. ....+......+.+++.+||+.+|++|||+.|+++.|+.++..
T Consensus 284 ~~~~~----~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 284 FYKLI----QNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHHH----HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHH----hcCC---------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 33322 1111 1112223356788999999999999999999999999987654
No 49
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1e-38 Score=344.00 Aligned_cols=254 Identities=27% Similarity=0.427 Sum_probs=206.6
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||++.+. +..||+|++..... ..+++.+|++++++++|+||+++++++.+....++||||+++|+
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 105 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCB
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCc
Confidence 44589999999999999987 67899999986543 34678999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++... ...+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++..... .......
T Consensus 106 L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~ 180 (283)
T 3gen_A 106 LLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVG 180 (283)
T ss_dssp HHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-HHHSTTS
T ss_pred HHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc-ccccccC
Confidence 99998653 34699999999999999999999998 9999999999999999999999999999865321 1112233
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+|+.|+|||++.+..++.++||||||+++|||++ |+.||............ ..+ .....+...
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-----~~~---------~~~~~~~~~ 246 (283)
T 3gen_A 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQG---------LRLYRPHLA 246 (283)
T ss_dssp TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-----HTT---------CCCCCCTTC
T ss_pred CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHH-----hcc---------cCCCCCCcC
Confidence 456788999999999999999999999999999998 99999875543322221 111 011112223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
...+.+++.+|++.+|++|||+.|+++.|+++...|
T Consensus 247 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 247 SEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 457889999999999999999999999999987543
No 50
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.6e-39 Score=375.27 Aligned_cols=253 Identities=27% Similarity=0.408 Sum_probs=213.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
..+.+.||+|+||.||+|.+. +..||||+++.... ..++|.+|++++++++||||++++++|......++||||+++
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~ 300 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 300 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCC
Confidence 345689999999999999987 78999999976533 457899999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++..... .....
T Consensus 301 g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~ 376 (495)
T 1opk_A 301 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 376 (495)
T ss_dssp CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CEECC
T ss_pred CCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC-ceeec
Confidence 9999999876667799999999999999999999998 9999999999999999999999999999876322 22222
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
....+++.|+|||++....++.++|||||||++|||++ |+.||.......... . +..+ .....+.
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~-~----~~~~---------~~~~~~~ 442 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-L----LEKD---------YRMERPE 442 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-H----HHTT---------CCCCCCT
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-H----HHcC---------CCCCCCC
Confidence 33456789999999999999999999999999999999 999998765433221 1 1111 1122233
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
.....+.+++.+||+.+|++|||+.||+++|+++.
T Consensus 443 ~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 443 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 44567889999999999999999999999999875
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.3e-39 Score=354.79 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=201.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|+.++++++||||+++++++.++...++||||+++
T Consensus 10 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~ 89 (323)
T 3tki_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89 (323)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCC
Confidence 34679999999999999986 88999999976533 3346789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+.........
T Consensus 90 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 164 (323)
T 3tki_A 90 GELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164 (323)
T ss_dssp EEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred CcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCccccc
Confidence 999999863 34699999999999999999999998 9999999999999999999999999999876433333334
Q ss_pred ccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccch-HHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 721 TTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~-l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
....||+.|+|||++.+..+ +.++|||||||++|||++|+.||........ ...|.. ... .....
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~----~~~---------~~~~~ 231 (323)
T 3tki_A 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----KKT---------YLNPW 231 (323)
T ss_dssp CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT----TCT---------TSTTG
T ss_pred CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc----ccc---------cCCcc
Confidence 45689999999999987765 7899999999999999999999986554322 222111 110 00111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
......+.+++.+|++.+|++|||+.|+++.
T Consensus 232 ~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 232 KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 2334567899999999999999999999763
No 52
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.3e-39 Score=372.58 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=208.7
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||+|.+. ++.||||+++... ...+.|.+|++++++++||||+++++++. ....++||||+++|+
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 45689999999999999997 7889999998654 34678999999999999999999999987 567899999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .......
T Consensus 269 L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~~~~~~~ 344 (454)
T 1qcf_A 269 LLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN-EYTAREG 344 (454)
T ss_dssp HHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-HHHTTCS
T ss_pred HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-ceeccCC
Confidence 99999765555789999999999999999999998 9999999999999999999999999999865321 1111233
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+++.|+|||++..+.++.++|||||||++|||++ |+.||........... +..+. ....+...
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~-----i~~~~---------~~~~~~~~ 410 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-----LERGY---------RMPRPENC 410 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-----HHHTC---------CCCCCTTS
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCC---------CCCCCCCC
Confidence 456788999999999999999999999999999999 9999986554332221 11111 11122344
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
+..+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 411 ~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 411 PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 567889999999999999999999999999865
No 53
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1e-38 Score=348.75 Aligned_cols=255 Identities=27% Similarity=0.417 Sum_probs=211.8
Q ss_pred hccccccccCcEEEEEEEEC-------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 105 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIV 105 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEE
Confidence 45678999999999999862 4789999997653 344577899999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhccc----------------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887 636 EFMANGNLQAHLLEDKA----------------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL 693 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL 693 (870)
||+++|+|.+++..... ..+++..++.++.|+++||+|||++ +|+||||||+||+
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NIl 182 (314)
T 2ivs_A 106 EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNIL 182 (314)
T ss_dssp ECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred eecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheEE
Confidence 99999999999976432 3589999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchH
Q 002887 694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLI 772 (870)
Q Consensus 694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l 772 (870)
+++++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.........
T Consensus 183 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~ 262 (314)
T 2ivs_A 183 VAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF 262 (314)
T ss_dssp EETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999987644333333344567889999999999999999999999999999999 99999876544322
Q ss_pred HHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 773 GQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 773 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
.. +..+. ...........+.+++.+|++.+|++||++.|+++.|++++.
T Consensus 263 ~~-----~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 263 NL-----LKTGH---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HH-----HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH-----hhcCC---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 21 11111 111223345678899999999999999999999999999764
No 54
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.9e-39 Score=345.94 Aligned_cols=256 Identities=27% Similarity=0.394 Sum_probs=215.4
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|... ++.||+|++.... ...+.+.+|++++++++||||+++++++.+....++||||+++
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 93 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 93 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 445689999999999999987 7899999997643 3457789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
++|.+++.......+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... .....
T Consensus 94 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~~ 169 (288)
T 3kfa_A 94 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH 169 (288)
T ss_dssp EEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS-SSEEE
T ss_pred CcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC-ccccc
Confidence 9999999876667799999999999999999999999 9999999999999999999999999999876432 22223
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||............ ..+ .......
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-----~~~---------~~~~~~~ 235 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKD---------YRMERPE 235 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTT---------CCCCCCT
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----hcc---------CCCCCCC
Confidence 34567889999999999999999999999999999999 99999876544332211 111 1112223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
.....+.+++.+|++.+|++|||+.|+++.|+++....
T Consensus 236 ~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 236 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 34567889999999999999999999999999987654
No 55
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.8e-39 Score=352.27 Aligned_cols=257 Identities=27% Similarity=0.403 Sum_probs=197.4
Q ss_pred hhccccccccCcEEEEEEEEC--Ce---eEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeE----
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DK---QVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANM---- 631 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~---~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~---- 631 (870)
+.+.+.||+|+||.||+|... ++ .||||++... .....+.+.+|++++++++||||+++++++......
T Consensus 25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (323)
T 3qup_A 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP 104 (323)
T ss_dssp CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence 345689999999999999875 22 7999999765 334567899999999999999999999999877655
Q ss_pred --EEEEEEccCCchhhhhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEec
Q 002887 632 --GLIYEFMANGNLQAHLLEDKA----DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADF 705 (870)
Q Consensus 632 --~LV~Ey~~~gsL~~~l~~~~~----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DF 705 (870)
++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence 899999999999999865432 2589999999999999999999999 9999999999999999999999999
Q ss_pred cCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCC
Q 002887 706 GLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGD 784 (870)
Q Consensus 706 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~ 784 (870)
|+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||............ .. +.
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~----~~-~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL----IG-GN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH----HT-TC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHH----hc-CC
Confidence 99987643333233344567889999999999999999999999999999999 99999876554433221 11 11
Q ss_pred cchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 785 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
...........+.+++.+|++.+|++|||+.|+++.|++++.-
T Consensus 257 ---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 257 ---------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0112223446788999999999999999999999999998754
No 56
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.7e-39 Score=341.26 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=206.1
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecC--CeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEG--ANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|+++++.||||++.... ....+.+.+|+.++++++||||+++++++.+. ...++||||++
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 456799999999999999999999999998653 34456799999999999999999999999887 78899999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCC--ceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP--IVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+|+|.+++.......+++..++.++.|+++||+|||+. + |+||||||+||++++++.++|+|||++....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~----- 164 (271)
T 3kmu_A 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ----- 164 (271)
T ss_dssp TCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-----
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-----
Confidence 99999999876555799999999999999999999987 6 9999999999999999999999998875431
Q ss_pred cccccccCCCCccCccccccCCCCc---cchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTE---KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~---ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.....||+.|+|||.+.+...+. ++||||||+++|||++|+.||........... ....+ ..
T Consensus 165 --~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~---------~~ 229 (271)
T 3kmu_A 165 --SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK----VALEG---------LR 229 (271)
T ss_dssp --CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH----HHHSC---------CC
T ss_pred --ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH----HHhcC---------CC
Confidence 12356899999999998765444 89999999999999999999986554332221 12111 11
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
...+......+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 230 PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1222334557889999999999999999999999999864
No 57
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7e-39 Score=348.08 Aligned_cols=256 Identities=23% Similarity=0.382 Sum_probs=203.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||+
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 93 (294)
T 4eqm_A 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYI 93 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCC
Confidence 45679999999999999975 7899999986542 334567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 94 ~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 167 (294)
T 4eqm_A 94 EGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET-SLT 167 (294)
T ss_dssp CSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc-ccc
Confidence 999999998643 4689999999999999999999998 9999999999999999999999999999865322 122
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ...... .... .. ...
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~----~~~~~~-~~~~-~~----~~~ 237 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI----KHIQDS-VPNV-TT----DVR 237 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH----HHHSSC-CCCH-HH----HSC
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH----HHhhcc-CCCc-ch----hcc
Confidence 2344679999999999999999999999999999999999999998654332211 111111 1100 00 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhh
Q 002887 799 TNTVWKAVEIALACIHTISTRRP-TMNQVVIELNDCLA 835 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RP-sm~eVl~~L~~~~~ 835 (870)
...+..+.+++.+|++.+|++|| ++.++.+.|+.++.
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 22345788999999999999999 99999999987653
No 58
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.3e-39 Score=352.96 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=203.8
Q ss_pred hccccccccCcEEEEEEEEC--Cee----EEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQ----VAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~----vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|.+. ++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. +...++|||
T Consensus 16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e 94 (325)
T 3kex_A 16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ 94 (325)
T ss_dssp EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence 34578999999999999974 443 7888875443 334567889999999999999999999986 456889999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 95 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 170 (325)
T 3kex_A 95 YLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK 170 (325)
T ss_dssp CCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT
T ss_pred eCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccc
Confidence 99999999998654 35789999999999999999999999 999999999999999999999999999998754444
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........|+..|+|||++.+..++.++|||||||++|||++ |+.||........... +..+.. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~~~~~~---------~ 236 (325)
T 3kex_A 171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-----LEKGER---------L 236 (325)
T ss_dssp CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH-----HHTTCB---------C
T ss_pred cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHH-----HHcCCC---------C
Confidence 444455678889999999999999999999999999999999 9999987554332211 111111 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
.........+.+++.+|++.+|++||++.|+++.|+.+....
T Consensus 237 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 237 AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 111122335678999999999999999999999999876543
No 59
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.8e-38 Score=350.33 Aligned_cols=243 Identities=26% Similarity=0.363 Sum_probs=202.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|+.++++++||||+++++++......++||||+
T Consensus 8 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~ 87 (337)
T 1o6l_A 8 DYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYA 87 (337)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 34579999999999999986 8899999997652 234567889999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|..++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 88 ~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~~ 160 (337)
T 1o6l_A 88 NGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GA 160 (337)
T ss_dssp TTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT--TC
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC--CC
Confidence 999999988643 4689999999999999999999998 9999999999999999999999999999854222 22
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|+|||||++|||++|+.||........... ... +.. .++
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~-~~~----------~~p 225 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL----ILM-EEI----------RFP 225 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHH-CCC----------CCC
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHH----HHc-CCC----------CCC
Confidence 33456899999999999999999999999999999999999999976543322221 111 110 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRP-----TMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~ 828 (870)
......+.+++.+|++.+|++|| ++.|+++
T Consensus 226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 23345788999999999999999 8999876
No 60
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.8e-38 Score=341.99 Aligned_cols=256 Identities=25% Similarity=0.336 Sum_probs=198.7
Q ss_pred hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
+.+.+.||+|+||.||+|... +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 95 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 95 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEe
Confidence 445689999999999999874 3569999987643 344567899999999999999999999985 457889999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 96 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 170 (281)
T 1mp8_A 96 LCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-T 170 (281)
T ss_dssp CCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc-c
Confidence 99999999998643 34689999999999999999999998 9999999999999999999999999999876322 1
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........+++.|+|||.+.+..++.++||||||+++|||++ |+.||............ ..+.. .
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i-----~~~~~---------~ 236 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-----ENGER---------L 236 (281)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCC---------C
T ss_pred ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHH-----HcCCC---------C
Confidence 122234457789999999999999999999999999999997 99999876554432221 11110 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEI 838 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~ 838 (870)
.........+.+++.+|++.+|++|||+.|+++.|++++..+.
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 237 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1223345678899999999999999999999999999876543
No 61
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2e-38 Score=350.02 Aligned_cols=257 Identities=28% Similarity=0.390 Sum_probs=211.6
Q ss_pred hccccccccCcEEEEEEEEC--C-----eeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--D-----KQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~-----~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV 634 (870)
.+.+.||+|+||.||+|... + +.||+|++.... ....+.+.+|+++++++ +||||+++++++......++|
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 128 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVI 128 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEE
Confidence 45689999999999999974 2 479999997653 33456789999999999 899999999999999999999
Q ss_pred EEEccCCchhhhhhhcc------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEE
Q 002887 635 YEFMANGNLQAHLLEDK------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKL 702 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL 702 (870)
|||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+|||+++++.+||
T Consensus 129 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 205 (333)
T 2i1m_A 129 TEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 205 (333)
T ss_dssp EECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEB
T ss_pred EecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEE
Confidence 99999999999987543 24579999999999999999999998 9999999999999999999999
Q ss_pred EeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhh
Q 002887 703 ADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLA 781 (870)
Q Consensus 703 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~ 781 (870)
+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||..........+....
T Consensus 206 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~--- 282 (333)
T 2i1m_A 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD--- 282 (333)
T ss_dssp CCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH---
T ss_pred CccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc---
Confidence 99999987644433333344567889999999999999999999999999999999 99999876544333332221
Q ss_pred cCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 782 RGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 782 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
+. ....+......+.+++.+|++.+|++|||+.||++.|+++...
T Consensus 283 -~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 283 -GY---------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp -TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -CC---------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111222345788999999999999999999999999987654
No 62
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=9.1e-39 Score=368.62 Aligned_cols=251 Identities=28% Similarity=0.437 Sum_probs=204.1
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||+|.+. +..||||+++... ...++|.+|++++++++||||+++++++.+ ...++||||+++|+
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gs 264 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 264 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCB
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCC
Confidence 45678999999999999998 5789999998654 235679999999999999999999999976 67899999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+++..... .......
T Consensus 265 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~ 340 (452)
T 1fmk_A 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQG 340 (452)
T ss_dssp HHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-------------
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC-ceecccC
Confidence 99999765556799999999999999999999998 9999999999999999999999999999876322 1122233
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+++.|+|||++.++.++.++|||||||++|||++ |+.||........... +..+. ....+...
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~-----i~~~~---------~~~~~~~~ 406 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-----VERGY---------RMPCPPEC 406 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTC---------CCCCCTTS
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCC---------CCCCCCCC
Confidence 457789999999999999999999999999999999 9999986554332211 11121 11223344
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
+..+.+++.+||+.+|++|||+.+|++.|+++.
T Consensus 407 ~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 407 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 567889999999999999999999999999865
No 63
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.4e-38 Score=342.65 Aligned_cols=257 Identities=31% Similarity=0.537 Sum_probs=196.2
Q ss_pred hhccccccccCcEEEEEEEECCeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|+..+ .||||+++... ....+.+.+|++++++++|+||+++++++. ....++||||+++
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~ 103 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEG 103 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCE
T ss_pred eeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEEecCC
Confidence 3456899999999999998766 49999987553 344577999999999999999999999764 5568999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 104 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (289)
T 3og7_A 104 SSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179 (289)
T ss_dssp EEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------------
T ss_pred CcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccccc
Confidence 9999988643 35699999999999999999999998 9999999999999999999999999999865433333334
Q ss_pred ccccCCCCccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 721 TTVVGTPGYLDPEYYI---SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~---~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
....||+.|+|||.+. +..++.++||||||+++|||++|+.||........+.+.+. .+... +.+ ...
T Consensus 180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~----~~~~~----~~~-~~~ 250 (289)
T 3og7_A 180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG----RGSLS----PDL-SKV 250 (289)
T ss_dssp ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH----HTSCC----CCT-TSS
T ss_pred cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc----ccccC----cch-hhc
Confidence 4567999999999986 56688899999999999999999999987654443333222 22111 111 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
....+..+.+++.+|++.+|++|||+.|++++|+++.
T Consensus 251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 2234567889999999999999999999999999865
No 64
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-38 Score=349.56 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=211.3
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 106 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEE
Confidence 345689999999999999864 5789999997653 33456789999999999999999999999999999999
Q ss_pred EEEccCCchhhhhhhccc--------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEecc
Q 002887 635 YEFMANGNLQAHLLEDKA--------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFG 706 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFG 706 (870)
|||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCc
Confidence 999999999999875431 4578999999999999999999998 99999999999999999999999999
Q ss_pred CCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 707 LSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 707 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||.......... ... .+..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~----~~~-~~~~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR----FVM-EGGL 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH----HHH-TTCC
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH----HHH-cCCc
Confidence 9986543322233344567889999999999999999999999999999999 899997654332221 111 1111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEI 838 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~ 838 (870)
..........+.+++.+|++.+|++|||+.|+++.|++......
T Consensus 259 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~ 302 (322)
T 1p4o_A 259 ---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF 302 (322)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred ---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCC
Confidence 11122344568899999999999999999999999999765443
No 65
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.3e-38 Score=343.96 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=201.8
Q ss_pred hhccccccccCcEEEEEEEEC--C-------eeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--D-------KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~-------~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+|... + ..||+|++........+.+.+|++++++++||||+++++++..+...++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL 89 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence 345689999999999999875 3 5699999987766677889999999999999999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc--------EEEEec
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ--------AKLADF 705 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--------vkL~DF 705 (870)
||||+++|+|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+||
T Consensus 90 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 90 VQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 99999999999999653 34589999999999999999999999 9999999999999998887 999999
Q ss_pred cCCccccCCCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCC-CCCCCCccchHHHHHHHHhhcC
Q 002887 706 GLSRIFPVEGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQP-VIQKTPQRTLIGQWVSSMLARG 783 (870)
Q Consensus 706 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~-p~~~~~~~~~l~~~~~~~~~~~ 783 (870)
|++..... .....|++.|+|||++.+ ..++.++||||||+++|||++|.. |+....... ..... ....
T Consensus 166 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~---~~~~ 235 (289)
T 4fvq_A 166 GISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFY---EDRH 235 (289)
T ss_dssp CSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHH---HTTC
T ss_pred cccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHh---hccC
Confidence 99875421 223457899999999987 679999999999999999999654 444333221 11111 1111
Q ss_pred CcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhHh
Q 002887 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIA 839 (870)
Q Consensus 784 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~~ 839 (870)
. .+......+.+++.+|++.+|++|||+.|+++.|++++.-..+
T Consensus 236 ~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 236 Q------------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp C------------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred C------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 1 1111123577999999999999999999999999998764433
No 66
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.7e-38 Score=348.56 Aligned_cols=258 Identities=28% Similarity=0.448 Sum_probs=211.4
Q ss_pred hhccccccccCcEEEEEEEEC---------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANM 631 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 631 (870)
+.+.+.||+|+||.||+|... +..||||++.... ....+.+.+|+++++++ +||||+++++++......
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 116 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 116 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCC
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCce
Confidence 445689999999999999863 4679999997653 34457789999999999 999999999999999999
Q ss_pred EEEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887 632 GLIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK 697 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 697 (870)
++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.+
T Consensus 117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193 (334)
T ss_dssp EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcCC
Confidence 999999999999999976432 3489999999999999999999998 99999999999999999
Q ss_pred CcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002887 698 FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWV 776 (870)
Q Consensus 698 ~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~ 776 (870)
+.+||+|||+++...............+++.|+|||++.+..++.++||||||+++|||++ |+.||...........
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-- 271 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-- 271 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH--
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH--
Confidence 9999999999987643332223344567889999999999899999999999999999999 9999976543322211
Q ss_pred HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
+..+.. ..........+.+++.+|++.+|++||++.|+++.|++++...
T Consensus 272 ---~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 272 ---LKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp ---HHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---HhcCCC---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 111111 1112234457889999999999999999999999999987653
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.3e-38 Score=337.60 Aligned_cols=254 Identities=28% Similarity=0.428 Sum_probs=208.6
Q ss_pred hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
+.+.+.||+|+||.||+|... ++.||||++.... ...+.+.+|++++++++||||+++++++.. +..++||||++++
T Consensus 15 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~ 92 (279)
T 1qpc_A 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG 92 (279)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred hhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCC
Confidence 345689999999999999987 6789999997653 235678999999999999999999999874 5689999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.......+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||++...... ......
T Consensus 93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 168 (279)
T 1qpc_A 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN-EYTARE 168 (279)
T ss_dssp BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS-CEECCT
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc-cccccc
Confidence 999999765445799999999999999999999998 9999999999999999999999999999876322 222223
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
...++..|+|||.+.+..++.++||||||++++||++ |+.||.......... .. ..+. .......
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~----~~-~~~~---------~~~~~~~ 234 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL-ERGY---------RMVRPDN 234 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH----HH-HTTC---------CCCCCTT
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH----HH-hccc---------CCCCccc
Confidence 4457889999999998899999999999999999999 999997654432221 11 1111 1111223
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
....+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 446788999999999999999999999999997643
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=346.60 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=203.9
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh------hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ------GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 633 (870)
.+.+.+.||+|+||.||++... ++.||+|++...... ..+.+.+|++++++++||||+++++++......++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3456789999999999999986 889999999765322 35678999999999999999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----cEEEEeccCCc
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----QAKLADFGLSR 709 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~vkL~DFGla~ 709 (870)
||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+++++ .+||+|||+++
T Consensus 92 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 92 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999999864 35699999999999999999999998 999999999999999887 89999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........+.... . ... ..
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~----~-~~~-~~- 236 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS----A-VNY-EF- 236 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH----H-TCC-CC-
T ss_pred ECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH----h-cCC-Cc-
Confidence 763221 2234679999999999998999999999999999999999999997655433322211 1 100 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.... .......+.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 EDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred Cccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 0122356789999999999999999999986
No 69
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.9e-38 Score=343.07 Aligned_cols=258 Identities=29% Similarity=0.413 Sum_probs=210.2
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccch-hhhHHHHHHHHHHHHh-ccccceeEEEEEecCC-eEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSV-QGYKQFQAEVELLIRA-HHKNLTILVGYCDEGA-NMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~-~~~ 632 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++.++ +||||+++++++.... ..+
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~ 108 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceE
Confidence 345689999999999999852 57899999976533 3456789999999999 7999999999987754 489
Q ss_pred EEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887 633 LIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF 698 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 698 (870)
+||||+++|+|.+++..... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~ 185 (316)
T 2xir_A 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN 185 (316)
T ss_dssp EEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCC
Confidence 99999999999999976542 2289999999999999999999998 999999999999999999
Q ss_pred cEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHH
Q 002887 699 QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVS 777 (870)
Q Consensus 699 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~ 777 (870)
.+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||++ |+.||............
T Consensus 186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-- 263 (316)
T 2xir_A 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-- 263 (316)
T ss_dssp CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH--
T ss_pred CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH--
Confidence 999999999987644333333445668899999999999999999999999999999998 99999765543322221
Q ss_pred HHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 778 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
...+.. ..........+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 264 --~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 264 --LKEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp --HHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --hccCcc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 111111 111222345688999999999999999999999999998754
No 70
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.6e-39 Score=352.43 Aligned_cols=266 Identities=26% Similarity=0.351 Sum_probs=210.1
Q ss_pred hhccccccccCcEEEEEEEE------CCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEe--cCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL------DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD--EGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~LV 634 (870)
+.+.+.||+|+||.||++++ .++.||||++........+.+.+|++++++++|+||+++++++. +....++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 34568999999999999985 37889999998877667788999999999999999999999886 45668899
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 105 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 99999999999986533 4699999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCcc-ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC------Ccch
Q 002887 715 GGTH-VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG------DIKN 787 (870)
Q Consensus 715 ~~~~-~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~------~~~~ 787 (870)
.... ......|++.|+|||++.+..++.++||||||++++||++|+.||....... ........ .+.+
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 255 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-----LRMMGCERDVPALSRLLE 255 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-----HHHCC----CCHHHHHHH
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh-----hhhcccccccccHHHHHH
Confidence 2221 2234568888999999999999999999999999999999999986432210 00000000 0011
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 788 IVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 788 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
.+...............+.+++.+|++.+|++|||+.|+++.|+.+....
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 256 LLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred HhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 11122222333445667899999999999999999999999999876544
No 71
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=354.00 Aligned_cols=250 Identities=21% Similarity=0.325 Sum_probs=202.4
Q ss_pred cccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 566 ERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
.+.||+|+||.||+|... ++.||+|++........+.+.+|++++++++||||+++++++.+....++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 367999999999999975 889999999887666778899999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE--cCCCcEEEEeccCCccccCCCCccccc
Q 002887 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL--NEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 644 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl--d~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+|||+++.+... ....
T Consensus 174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~---~~~~ 246 (373)
T 2x4f_A 174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR---EKLK 246 (373)
T ss_dssp HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT---CBCC
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc---cccc
Confidence 9988643 34689999999999999999999998 99999999999999 56789999999999876332 2223
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........+.++... .. ...... ....
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~----~~--~~~~~~-----~~~~ 315 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILAC----RW--DLEDEE-----FQDI 315 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT----CC--CSCSGG-----GTTS
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc----cC--CCChhh-----hccC
Confidence 457999999999999999999999999999999999999999876554433332221 10 000000 1123
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH--HHHHh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVI--ELNDC 833 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~--~L~~~ 833 (870)
...+.+++.+|++.+|++|||+.|+++ .+++.
T Consensus 316 ~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 457889999999999999999999997 55553
No 72
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.9e-38 Score=353.48 Aligned_cols=247 Identities=23% Similarity=0.331 Sum_probs=203.5
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh------hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ------GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
+.+.+.||+|+||.||+++.. ++.||+|++...... ..+.+.+|+.++++++||||+++++++.+....++|
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 93 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLI 93 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEE
Confidence 345689999999999999986 889999999865332 246789999999999999999999999999999999
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----cEEEEeccCCcc
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----QAKLADFGLSRI 710 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~vkL~DFGla~~ 710 (870)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||+. +|+||||||+|||+++++ .+||+|||+++.
T Consensus 94 ~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 94 LELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 999999999999864 34799999999999999999999998 999999999999998877 799999999987
Q ss_pred ccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
.... .......||+.|+|||++.+..++.++|||||||++|||++|++||........+..+ . .+... ++
T Consensus 169 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i----~-~~~~~--~~ 238 (361)
T 2yab_A 169 IEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI----T-AVSYD--FD 238 (361)
T ss_dssp CCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH----H-TTCCC--CC
T ss_pred cCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----H-hcCCC--CC
Confidence 6332 2234567999999999999989999999999999999999999999875543332221 1 11100 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.. .......+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 0122456889999999999999999999985
No 73
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=340.33 Aligned_cols=244 Identities=24% Similarity=0.381 Sum_probs=193.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch--------------------------hhhHHHHHHHHHHHHhcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--------------------------QGYKQFQAEVELLIRAHH 615 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--------------------------~~~~~f~~Ei~~l~~l~H 615 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++|
T Consensus 16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 95 (298)
T 2zv2_A 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDH 95 (298)
T ss_dssp EEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCC
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCC
Confidence 45679999999999999875 88999999976432 123568999999999999
Q ss_pred ccceeEEEEEec--CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887 616 KNLTILVGYCDE--GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL 693 (870)
Q Consensus 616 ~nIv~l~g~~~~--~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL 693 (870)
|||+++++++.+ ....++||||+++++|.+++. ...+++..+..++.|+++||+|||++ +|+||||||+|||
T Consensus 96 ~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL 169 (298)
T ss_dssp TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence 999999999986 568899999999999988763 35799999999999999999999998 9999999999999
Q ss_pred EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCCCccc
Q 002887 694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNR---LTEKSDVYSFGVVLLELITGQPVIQKTPQRT 770 (870)
Q Consensus 694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~ksDVwS~GvvL~elltG~~p~~~~~~~~ 770 (870)
++.++.+||+|||+++..... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.......
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ECCCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 999999999999999876322 22234567999999999998765 4788999999999999999999997654322
Q ss_pred hHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 771 LIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 771 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ... +..+... ..........+.+++.+|++.||++|||+.|+++
T Consensus 248 ~----~~~-~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 L----HSK-IKSQALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H----HHH-HHHCCCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H----HHH-HhcccCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111 1111110 0111123456889999999999999999999875
No 74
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.5e-38 Score=339.00 Aligned_cols=250 Identities=27% Similarity=0.426 Sum_probs=202.1
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecC-CeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG-ANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||++..+++.||||++.... ..+.+.+|++++++++||||+++++++.+. ...++||||+++|+
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred eEEeEEecCCCceEEEEEEcCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 456799999999999999999999999997653 456789999999999999999999997654 47899999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 102 L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-----~~~ 173 (278)
T 1byg_A 102 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----QDT 173 (278)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------------
T ss_pred HHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc-----ccC
Confidence 99999765545589999999999999999999998 9999999999999999999999999998754321 223
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..+++.|+|||.+.+..++.++||||||++++||++ |+.||........... ...+. ........
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~-----~~~~~---------~~~~~~~~ 239 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGY---------KMDAPDGC 239 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-----HTTTC---------CCCCCTTC
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HhcCC---------CCCCcccC
Confidence 467889999999999999999999999999999998 9999986654332221 11111 11122334
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
...+.+++.+|++.+|++||++.|+++.|+++...+
T Consensus 240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 567889999999999999999999999999976543
No 75
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=352.69 Aligned_cols=243 Identities=27% Similarity=0.347 Sum_probs=198.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. ++.||||+++... ....+.+.+|..++..+ +||||+++++++.+....++||||
T Consensus 26 ~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~ 105 (353)
T 3txo_A 26 EFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEF 105 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeC
Confidence 45689999999999999986 7899999998652 23446678999999998 799999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|..++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.... ..
T Consensus 106 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~--~~ 178 (353)
T 3txo_A 106 VNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NG 178 (353)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc--CC
Confidence 9999999998653 4699999999999999999999998 999999999999999999999999999985422 22
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. +. ..+
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i----~~-~~----------~~~ 243 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI----LN-DE----------VVY 243 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HH-CC----------CCC
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH----Hc-CC----------CCC
Confidence 2344568999999999999889999999999999999999999999876544333222 11 11 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTM------NQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm------~eVl~ 828 (870)
+......+.+++.+|++.+|++||++ .|+++
T Consensus 244 p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 244 PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 22234567899999999999999998 66654
No 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=342.27 Aligned_cols=252 Identities=26% Similarity=0.424 Sum_probs=198.9
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
.+.+.||+|+||.||+|++.++.||||++... ...+.|.+|++++++++||||+++++++.+ ..++||||+++|+|
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L 86 (307)
T 2eva_A 11 EVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBH
T ss_pred eeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCH
Confidence 34678999999999999999999999998654 345778999999999999999999999874 47899999999999
Q ss_pred hhhhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc-EEEEeccCCccccCCCCccccc
Q 002887 644 QAHLLEDKA-DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ-AKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 644 ~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-vkL~DFGla~~~~~~~~~~~~~ 721 (870)
.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||++...... ..
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~~ 161 (307)
T 2eva_A 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----MT 161 (307)
T ss_dssp HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------------
T ss_pred HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----cc
Confidence 999975432 35789999999999999999999943349999999999999998886 799999999755221 22
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
...||+.|+|||++.+..++.++||||||+++|||++|+.||...........| ... .+.. .......
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~-~~~~---------~~~~~~~ 229 (307)
T 2eva_A 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVH-NGTR---------PPLIKNL 229 (307)
T ss_dssp ---CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--HHH-TTCC---------CCCBTTC
T ss_pred cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--HHh-cCCC---------CCccccc
Confidence 346899999999999999999999999999999999999999765432211111 111 1111 1111223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
...+.+++.+|++.+|++|||+.|+++.|+.+...
T Consensus 230 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 264 (307)
T 2eva_A 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264 (307)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999987543
No 77
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-37 Score=343.74 Aligned_cols=258 Identities=17% Similarity=0.198 Sum_probs=207.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... .+.+.+|+++++++ +|+||+++++++..+...++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (330)
T 2izr_A 12 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-G 88 (330)
T ss_dssp EEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-C
Confidence 34579999999999999964 89999999876532 35689999999999 9999999999999999999999999 9
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc-----EEEEeccCCccccCCC
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ-----AKLADFGLSRIFPVEG 715 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-----vkL~DFGla~~~~~~~ 715 (870)
++|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++.+....
T Consensus 89 ~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~ 164 (330)
T 2izr_A 89 PSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164 (330)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence 9999998654 45799999999999999999999998 9999999999999999887 9999999998764332
Q ss_pred Ccc-----ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 716 GTH-----VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 716 ~~~-----~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ........ .. ...
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~-~~~i~~~~-~~-~~~ 241 (330)
T 2izr_A 165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKER-YQKIGDTK-RA-TPI 241 (330)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHH-HHHHHHHH-HH-SCH
T ss_pred CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHH-HHHHHhhh-cc-CCH
Confidence 211 12456799999999999999999999999999999999999999987543332211 11111000 00 000
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
..+. ...+ .+.+++..|++.+|++||++.+|++.|+++...
T Consensus 242 ~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 242 EVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 0122 788999999999999999999999999987654
No 78
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-37 Score=344.05 Aligned_cols=266 Identities=23% Similarity=0.325 Sum_probs=210.2
Q ss_pred HHHHHhhccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHH--hccccceeEEEEEecCC----eE
Q 002887 558 VLKITNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR--AHHKNLTILVGYCDEGA----NM 631 (870)
Q Consensus 558 l~~~t~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~----~~ 631 (870)
.....+.+.+.||+|+||.||+|+..++.||||++.... .+.+.+|++++.. ++||||+++++++.... ..
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred cccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 334445667899999999999999999999999996542 3567889999988 79999999999998776 78
Q ss_pred EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHH--------hCCCCCceeCCCCCCCEEEcCCCcEEEE
Q 002887 632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH--------NGCKPPIVHRDVKSANILLNEKFQAKLA 703 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~IvHrDLKp~NILld~~~~vkL~ 703 (870)
++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++++||+
T Consensus 116 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp EEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred EEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 999999999999999954 46899999999999999999999 66 99999999999999999999999
Q ss_pred eccCCccccCCCCcc--ccccccCCCCccCccccccCC------CCccchHHHHHHHHHHHHhC----------CCCCCC
Q 002887 704 DFGLSRIFPVEGGTH--VSTTVVGTPGYLDPEYYISNR------LTEKSDVYSFGVVLLELITG----------QPVIQK 765 (870)
Q Consensus 704 DFGla~~~~~~~~~~--~~~~~~gt~~y~APE~~~~~~------~~~ksDVwS~GvvL~elltG----------~~p~~~ 765 (870)
|||++.......... ......||+.|+|||++.+.. ++.++|||||||++|||++| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 999998764332211 224457999999999997653 33689999999999999999 778865
Q ss_pred CCcc-chHHHHHHHHhhcCCcchhcccccCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 766 TPQR-TLIGQWVSSMLARGDIKNIVDHRLQGD-FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 766 ~~~~-~~l~~~~~~~~~~~~~~~i~d~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
.... .....+........ . .+.+... ...+....+.+++.+||+.+|++|||+.||++.|+++...+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 270 LVPSDPSVEEMRKVVCEQK-L----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TSCSSCCHHHHHHHHTTSC-C----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCcCcccHHHHHHHHHHHH-h----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 4322 22333332222111 1 1111111 12366778999999999999999999999999999976543
No 79
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=7.9e-38 Score=342.68 Aligned_cols=258 Identities=22% Similarity=0.326 Sum_probs=200.5
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||||+++
T Consensus 24 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 103 (311)
T 3niz_A 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK 103 (311)
T ss_dssp EEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE
T ss_pred HhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC
Confidence 34578999999999999986 88999999975432 2346788999999999999999999999999999999999985
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
+|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 104 -~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~ 176 (311)
T 3niz_A 104 -DLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP--VRSY 176 (311)
T ss_dssp -EHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--CC--
T ss_pred -CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC--cccc
Confidence 787777543 34689999999999999999999998 9999999999999999999999999999865322 2223
Q ss_pred ccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccchh------ccc
Q 002887 721 TTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIKNI------VDH 791 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~~i------~d~ 791 (870)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........+.......-... ..... .+.
T Consensus 177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 44578999999999976 5689999999999999999999999987766555554433221110 00000 000
Q ss_pred ccC--CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 792 RLQ--GDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 792 ~l~--~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
... .... .....++.+++.+|++.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 0000 112356789999999999999999999975
No 80
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=342.27 Aligned_cols=264 Identities=25% Similarity=0.343 Sum_probs=201.3
Q ss_pred HhhccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHh--ccccceeEEEEEecC----CeEEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRA--HHKNLTILVGYCDEG----ANMGLIY 635 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l--~H~nIv~l~g~~~~~----~~~~LV~ 635 (870)
.+.+.+.||+|+||.||+|+..++.||||++..... ..+..|.+++..+ +||||+++++++... ...++||
T Consensus 38 ~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 114 (337)
T 3mdy_A 38 QIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114 (337)
T ss_dssp HCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred ceEEEeEeecCCCeEEEEEEECCceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence 445678999999999999999999999999865432 3445555555554 999999999999877 6889999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCC-----CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC-----KPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.
T Consensus 115 e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~ 191 (337)
T 3mdy_A 115 DYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK 191 (337)
T ss_dssp CCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred eccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCcee
Confidence 99999999999953 36899999999999999999999752 44899999999999999999999999999976
Q ss_pred ccCCCCcc--ccccccCCCCccCccccccCCCCcc------chHHHHHHHHHHHHhC----------CCCCCCCCccchH
Q 002887 711 FPVEGGTH--VSTTVVGTPGYLDPEYYISNRLTEK------SDVYSFGVVLLELITG----------QPVIQKTPQRTLI 772 (870)
Q Consensus 711 ~~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k------sDVwS~GvvL~elltG----------~~p~~~~~~~~~l 772 (870)
+....... ......||+.|+|||++.+.....+ +|||||||++|||++| +.||.........
T Consensus 192 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~ 271 (337)
T 3mdy_A 192 FISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPS 271 (337)
T ss_dssp CC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred eccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCc
Confidence 64322211 1234579999999999988776665 9999999999999999 6666544322211
Q ss_pred HHHHHHHhhcCCcchhcccccCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 773 GQWVSSMLARGDIKNIVDHRLQGDF-DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 773 ~~~~~~~~~~~~~~~i~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
.............. +.+.... .......+.+++.+||+.+|++|||+.||++.|+++..
T Consensus 272 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 272 YEDMREIVCIKKLR----PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp HHHHHHHHTTSCCC----CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhhhHHHHhhhccC----ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 11112222111111 1111111 23677889999999999999999999999999998764
No 81
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=357.31 Aligned_cols=248 Identities=22% Similarity=0.297 Sum_probs=203.1
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
+.+.+.||+|+||.||++... ++.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 13 Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 92 (444)
T 3soa_A 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLV 92 (444)
T ss_dssp EEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeC
Confidence 455689999999999999875 8999999997653 234567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc---CCCcEEEEeccCCccccCCC
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~vkL~DFGla~~~~~~~ 715 (870)
++|+|.+.+... ..+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+||+|||+++.....
T Consensus 93 ~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~- 166 (444)
T 3soa_A 93 TGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE- 166 (444)
T ss_dssp BCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT-
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC-
Confidence 999999988754 4689999999999999999999999 999999999999998 4678999999999866332
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........||+.|+|||++.+..++.++||||+||++|+|++|++||............. .+... . ..
T Consensus 167 -~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~-----~~~~~-~-----~~ 234 (444)
T 3soa_A 167 -QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK-----AGAYD-F-----PS 234 (444)
T ss_dssp -CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-----HTCCC-C-----CT
T ss_pred -CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-----hCCCC-C-----Cc
Confidence 222345689999999999999999999999999999999999999998665443332221 11110 0 01
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.........+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111233457889999999999999999999986
No 82
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7.2e-38 Score=337.10 Aligned_cols=256 Identities=26% Similarity=0.369 Sum_probs=205.9
Q ss_pred hccccccccCcEEEEEEEEC-----CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. +..||+|++... .....+.+.+|++++++++||||+++++++.+ ...++||||
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 93 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMEL 93 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEec
Confidence 34689999999999999864 235999999765 33456789999999999999999999999875 456899999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 94 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 168 (281)
T 3cc6_A 94 YPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED-Y 168 (281)
T ss_dssp CTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred CCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccccc-c
Confidence 9999999998653 34689999999999999999999998 99999999999999999999999999998653321 1
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
.......+++.|+|||++.+..++.++||||||+++|||++ |+.||........... +..+.. ..
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-----~~~~~~---------~~ 234 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-----LEKGDR---------LP 234 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-----HHHTCC---------CC
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-----HhcCCC---------CC
Confidence 22234567889999999999999999999999999999998 9999976554433221 111110 11
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhHh
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIA 839 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~~ 839 (870)
........+.+++.+|++.+|++||++.|+++.|+++...+..
T Consensus 235 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 1222345688999999999999999999999999998877643
No 83
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2e-38 Score=348.30 Aligned_cols=268 Identities=24% Similarity=0.361 Sum_probs=208.6
Q ss_pred hccccccccCcEEEEEEEE------CCeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEec--CCeEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYL------DDKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDE--GANMGLI 634 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--~~~~~LV 634 (870)
.+.+.||+|+||.||++.+ .++.||||++.... ....+.+.+|++++++++||||+++++++.+ ....++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 4567899999999999875 37889999998653 3446778999999999999999999999977 4678999
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 114 ~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp ECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999854 3589999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCc-cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccch-HHHHHHHHhhcCCcchhcccc
Q 002887 715 GGT-HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL-IGQWVSSMLARGDIKNIVDHR 792 (870)
Q Consensus 715 ~~~-~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~-l~~~~~~~~~~~~~~~i~d~~ 792 (870)
... .......++..|+|||++.+..++.++||||||++++||++|+.||........ ...+.........+.+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 221 123345688899999999998999999999999999999999999875321100 000000000000111122222
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
............+.+++.+|++.+|++|||+.|+++.|+++...-
T Consensus 268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 222333445678899999999999999999999999999876543
No 84
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1e-37 Score=349.39 Aligned_cols=248 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus 30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~ 109 (362)
T 2bdw_A 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 109 (362)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 3455689999999999999986 8899999997653 33456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC---cEEEEeccCCccccCC
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---QAKLADFGLSRIFPVE 714 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~vkL~DFGla~~~~~~ 714 (870)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||++......
T Consensus 110 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 110 VTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp CCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred CCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999988643 4689999999999999999999998 999999999999998654 5999999999866322
Q ss_pred CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|++||............ ..+... ..
T Consensus 185 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i-----~~~~~~------~~ 250 (362)
T 2bdw_A 185 ---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-----KAGAYD------YP 250 (362)
T ss_dssp ---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHTCCC------CC
T ss_pred ---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-----HhCCCC------CC
Confidence 2234567999999999999989999999999999999999999999865543322221 111110 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..........+.+++.+|++.||++||++.|+++
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0011233467889999999999999999999875
No 85
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.3e-38 Score=351.76 Aligned_cols=265 Identities=18% Similarity=0.190 Sum_probs=205.8
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccchhhh-----------HHHHHHHHHHHHhccccceeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSVQGY-----------KQFQAEVELLIRAHHKNLTILVGY 624 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~~~~-----------~~f~~Ei~~l~~l~H~nIv~l~g~ 624 (870)
+.+.+.||+|+||.||+|.+. ++.||||++........ ..+..|+..+..++|+||++++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 345689999999999999874 36899999876542111 123345556666789999999999
Q ss_pred EecC----CeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc--CCC
Q 002887 625 CDEG----ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN--EKF 698 (870)
Q Consensus 625 ~~~~----~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~ 698 (870)
+... ...++||||+ +++|.+++... ...+++..++.|+.|++.||+|||+. +|+||||||+|||++ .++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTT
T ss_pred eeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCC
Confidence 8764 4589999999 99999998653 35799999999999999999999999 999999999999999 889
Q ss_pred cEEEEeccCCccccCCCCc-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHH
Q 002887 699 QAKLADFGLSRIFPVEGGT-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIG 773 (870)
Q Consensus 699 ~vkL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~ 773 (870)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999876432211 11134459999999999999999999999999999999999999998644333333
Q ss_pred HHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 774 QWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 774 ~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.+...... ..+.+++++.+.. ...+..+.+++..|++.+|++||++.+|++.|++++..
T Consensus 272 ~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 272 RDSKIRYR-ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp HHHHHHHH-HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhh-hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 33322222 2344455554432 12345788999999999999999999999999998754
No 86
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=347.22 Aligned_cols=246 Identities=18% Similarity=0.277 Sum_probs=203.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||++... ++.+|+|.+.... .....+.+|++++++++||||+++++++.+....++||||+++|
T Consensus 8 ~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~ 86 (321)
T 1tki_A 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL 86 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred EeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCC
Confidence 45678999999999999986 7899999987543 34567899999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC--CCcEEEEeccCCccccCCCCccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE--KFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.+... ..
T Consensus 87 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~---~~ 159 (321)
T 1tki_A 87 DIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG---DN 159 (321)
T ss_dssp BHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT---CE
T ss_pred CHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC---Cc
Confidence 999988543 34689999999999999999999998 9999999999999997 789999999999876322 22
Q ss_pred cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 720 STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ .... .. .+... ..
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i----~~~~-~~--~~~~~----~~ 228 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI----MNAE-YT--FDEEA----FK 228 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----HHTC-CC--CCHHH----HT
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHH----HcCC-CC--CChhh----hc
Confidence 34567999999999999888999999999999999999999999875543332222 1111 00 00000 01
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.....+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 229 EISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22457889999999999999999999987
No 87
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6e-38 Score=334.50 Aligned_cols=252 Identities=26% Similarity=0.428 Sum_probs=207.9
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.+.+.||+|+||.||+|... ++.||+|++..... ..+.+.+|++++++++||||+++++++.+....++||||+++++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence 45678999999999999985 78899999986543 34678999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++...... .......
T Consensus 90 L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~ 164 (267)
T 3t9t_A 90 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTG 164 (267)
T ss_dssp HHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHSTTS
T ss_pred HHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc-ccccccc
Confidence 99998653 34689999999999999999999998 9999999999999999999999999999865321 1112233
Q ss_pred ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
..++..|+|||++.+..++.++||||||+++|||++ |+.||........... . ..+. ....+...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----i-~~~~---------~~~~~~~~ 230 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED----I-STGF---------RLYKPRLA 230 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH----H-HTTC---------CCCCCTTS
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHH----H-hcCC---------cCCCCccC
Confidence 457788999999998999999999999999999999 8999986543332221 1 1111 01112223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 231 STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4568899999999999999999999999999764
No 88
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.1e-38 Score=360.59 Aligned_cols=249 Identities=25% Similarity=0.331 Sum_probs=202.1
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.++||+|+||.||+|+.. ++.||+|++..... ...+.+.+|+.++.+++||||++++++|.+....++||||++
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 3579999999999999986 78899999976432 223458999999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 158 gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~-~~~~ 232 (437)
T 4aw2_A 158 GGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED-GTVQ 232 (437)
T ss_dssp TCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-SCEE
T ss_pred CCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC-CCcc
Confidence 99999999653 35699999999999999999999998 9999999999999999999999999999866332 2233
Q ss_pred cccccCCCCccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 720 STTVVGTPGYLDPEYYI-----SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~-----~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.....||+.|+|||++. ...++.++|||||||++|||++|++||..........+....... +.-+.
T Consensus 233 ~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~------~~~p~-- 304 (437)
T 4aw2_A 233 SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER------FQFPT-- 304 (437)
T ss_dssp CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH------CCCCS--
T ss_pred cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcccc------ccCCc--
Confidence 34568999999999997 457899999999999999999999999876544433332211110 00010
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTR--RPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~--RPsm~eVl~ 828 (870)
........+.+++.+|+..+|++ ||+++|+++
T Consensus 305 --~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 305 --QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp --SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred --ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11123456789999999888888 999999876
No 89
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9e-38 Score=337.21 Aligned_cols=248 Identities=30% Similarity=0.530 Sum_probs=200.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchh-------hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ-------GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~-------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
.+.+.||+|+||.||+|+.. ++.||+|++...... ..+.+.+|++++++++||||+++++++.+.. ++|
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv 99 (287)
T 4f0f_A 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMV 99 (287)
T ss_dssp EEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEE
T ss_pred eehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEE
Confidence 45678999999999999985 889999998654322 1267899999999999999999999997665 699
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCC--ceeCCCCCCCEEEcCCCc-----EEEEeccC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP--IVHRDVKSANILLNEKFQ-----AKLADFGL 707 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~-----vkL~DFGl 707 (870)
|||+++|+|.+.+.+. ...+++..++.++.|++.||+|||+. + |+||||||+|||++.++. +||+|||+
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~ 175 (287)
T 4f0f_A 100 MEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175 (287)
T ss_dssp EECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTT
T ss_pred EEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCCc
Confidence 9999999999888653 35799999999999999999999998 7 999999999999988776 99999999
Q ss_pred CccccCCCCccccccccCCCCccCccccc--cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 708 SRIFPVEGGTHVSTTVVGTPGYLDPEYYI--SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 708 a~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
++... .......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .........+
T Consensus 176 ~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~-- 246 (287)
T 4f0f_A 176 SQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREEG-- 246 (287)
T ss_dssp CBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHHHSC--
T ss_pred ccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHhccC--
Confidence 97532 1234567999999999984 45578999999999999999999999986553322 1111111111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
............+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 247 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 -------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11222334456788999999999999999999999999863
No 90
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-37 Score=334.24 Aligned_cols=257 Identities=21% Similarity=0.387 Sum_probs=209.6
Q ss_pred ccccccCcEEEEEEEE----CCeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 567 RVLGKGGFGTVYHGYL----DDKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~----~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
+.||+|+||.||+|.. .+..||||++.... ....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 4899999999999986 36789999998753 34567799999999999999999999999 456789999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc-cc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH-VS 720 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~-~~ 720 (870)
+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++.......... ..
T Consensus 95 ~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 170 (287)
T 1u59_A 95 PLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170 (287)
T ss_dssp EHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCC
T ss_pred CHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecc
Confidence 999988643 35699999999999999999999998 99999999999999999999999999998764332221 12
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT 799 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~ 799 (870)
....+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......... .+..+. ....+.
T Consensus 171 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-----~i~~~~---------~~~~~~ 236 (287)
T 1u59_A 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-----FIEQGK---------RMECPP 236 (287)
T ss_dssp CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH-----HHHTTC---------CCCCCT
T ss_pred ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHH-----HHhcCC---------cCCCCC
Confidence 33456889999999998899999999999999999999 999998655433221 111111 112223
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhHhhhc
Q 002887 800 NTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIARTK 842 (870)
Q Consensus 800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~~~~~ 842 (870)
.....+.+++.+|++.+|++||++.|+++.|+++........+
T Consensus 237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 279 (287)
T 1u59_A 237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279 (287)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence 4456788999999999999999999999999998765444443
No 91
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=346.60 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=199.5
Q ss_pred hccccccccCcEEEEEEEEC--Cee----EEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQ----VAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~----vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|.+. ++. ||+|.+... .....+.+.+|+.++++++||||+++++++.... .++|+|
T Consensus 18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~ 96 (327)
T 3lzb_A 18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ 96 (327)
T ss_dssp EEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEEC
T ss_pred eEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEE
Confidence 34579999999999999974 443 577777543 3345678999999999999999999999998754 789999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 97 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~ 172 (327)
T 3lzb_A 97 LMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 172 (327)
T ss_dssp CCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---------
T ss_pred ecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc
Confidence 99999999998754 34689999999999999999999998 999999999999999999999999999987644333
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........... +..+. ..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-----~~~~~---------~~ 238 (327)
T 3lzb_A 173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEKGE---------RL 238 (327)
T ss_dssp -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-----HHTTC---------CC
T ss_pred cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCC---------CC
Confidence 333344567889999999999999999999999999999999 9999987655432211 11111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.........+.+++.+|++.+|++||++.|+++.|+++...
T Consensus 239 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 12233445788999999999999999999999999997754
No 92
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=9.8e-38 Score=338.40 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=207.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|... ++.||||++.... ..+.+.+|+.++.++ +|+|++++++++.+....++||||+ +
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 89 (298)
T 1csn_A 13 KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-G 89 (298)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-C
Confidence 45678999999999999964 8999999986543 345688999999999 8999999999999999999999999 9
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc-----EEEEeccCCccccCCC
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ-----AKLADFGLSRIFPVEG 715 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~-----vkL~DFGla~~~~~~~ 715 (870)
++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++......
T Consensus 90 ~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~ 165 (298)
T 1csn_A 90 PSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 165 (298)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred CCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccc
Confidence 9999998653 34699999999999999999999998 9999999999999987776 9999999998764332
Q ss_pred Cc-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH--HHHHhhcCCcchh
Q 002887 716 GT-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW--VSSMLARGDIKNI 788 (870)
Q Consensus 716 ~~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~--~~~~~~~~~~~~i 788 (870)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.||...........+ +...........
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (298)
T 1csn_A 166 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE- 244 (298)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH-
T ss_pred ccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH-
Confidence 21 1234567999999999999999999999999999999999999999875433222111 111111111111
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 789 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
+ ....+..+.+++.+|++.+|++||++.+|++.|+++..
T Consensus 245 ----~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 245 ----L----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp ----H----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----H----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 1 11234578899999999999999999999999999764
No 93
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.5e-37 Score=349.58 Aligned_cols=243 Identities=21% Similarity=0.333 Sum_probs=197.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+++.. ++.||+|+++.... ...+.+.+|..++.++ +||||+++++++.+....++||||
T Consensus 55 ~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~ 134 (396)
T 4dc2_A 55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 134 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEc
Confidence 45689999999999999986 78899999986532 2345678999999887 899999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|..++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 135 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~--~ 207 (396)
T 4dc2_A 135 VNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--G 207 (396)
T ss_dssp CTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--T
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC--C
Confidence 9999999988643 4699999999999999999999998 9999999999999999999999999999853222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccch----HHHHHHHHhhcCCcchhccccc
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL----IGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~----l~~~~~~~~~~~~~~~i~d~~l 793 (870)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...........+.
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~--------- 278 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ--------- 278 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC---------
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc---------
Confidence 234567899999999999999999999999999999999999999964331110 1111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTM 823 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 823 (870)
..++......+.+++.+||+.||++||++
T Consensus 279 -~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 -IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11222344578899999999999999995
No 94
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-37 Score=352.19 Aligned_cols=264 Identities=18% Similarity=0.237 Sum_probs=204.4
Q ss_pred hhcccccccc--CcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKG--GFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G--~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
+.+.+.||+| +||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 3456899999 99999999986 8899999997653 3345678899999999999999999999999999999999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+........
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~ 183 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ 183 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence 99999999999876667799999999999999999999998 999999999999999999999999999875432211
Q ss_pred c-----cccccccCCCCccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc-------
Q 002887 717 T-----HVSTTVVGTPGYLDPEYYIS--NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR------- 782 (870)
Q Consensus 717 ~-----~~~~~~~gt~~y~APE~~~~--~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~------- 782 (870)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........+.+........
T Consensus 184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (389)
T 3gni_B 184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTI 263 (389)
T ss_dssp ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------
T ss_pred cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccc
Confidence 1 11223478999999999987 578999999999999999999999998765443332221111000
Q ss_pred --C-------------Ccchhcc---cc------cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 783 --G-------------DIKNIVD---HR------LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 783 --~-------------~~~~i~d---~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
. ...+... +. ............+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 264 PAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 0000000 00 0000112234568899999999999999999999853
No 95
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=343.27 Aligned_cols=254 Identities=27% Similarity=0.417 Sum_probs=201.4
Q ss_pred ccccccccCcEEEEEEEEC------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 565 FERVLGKGGFGTVYHGYLD------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.||+|+||.||+|... +..||||++.... ......+.+|++++++++||||+++++++......++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 3478999999999999874 2359999997653 33456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++........
T Consensus 128 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 128 MENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp CTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 9999999998653 35789999999999999999999998 9999999999999999999999999999876432211
Q ss_pred -cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 718 -HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 718 -~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.......+++.|+|||++.+..++.++||||||+++|||++ |+.||.......... . +..+. ..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~----~-~~~~~---------~~ 269 (333)
T 1mqb_A 204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK----A-INDGF---------RL 269 (333)
T ss_dssp -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----H-HHTTC---------CC
T ss_pred ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH----H-HHCCC---------cC
Confidence 11223456788999999999999999999999999999999 999997654432221 1 11111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.........+.+++.+||+.+|++||++.|+++.|++++..
T Consensus 270 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11223456788999999999999999999999999997754
No 96
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=3.3e-38 Score=371.41 Aligned_cols=252 Identities=28% Similarity=0.431 Sum_probs=208.7
Q ss_pred hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
..+.+.||+|+||.||+|.+. +..||||+++... ...++|.+|++++++++|+||+++++++.+ ...++||||+++|
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~g 346 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG 346 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTE
T ss_pred hhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCC
Confidence 345689999999999999998 5789999998654 235679999999999999999999999976 6789999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.......+++.+++.|+.||++||+|||++ +|+||||||+|||+++++.+||+|||+++..... ......
T Consensus 347 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~ 422 (535)
T 2h8h_A 347 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQ 422 (535)
T ss_dssp EHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-HHHTTC
T ss_pred cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-ceeccc
Confidence 999999765556799999999999999999999998 9999999999999999999999999999865321 111122
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
...++..|+|||++....++.++|||||||++|||++ |+.||........+.. +..+. .......
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~-----i~~~~---------~~~~~~~ 488 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-----VERGY---------RMPCPPE 488 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHH-----HHTTC---------CCCCCTT
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCC---------CCCCCCC
Confidence 3456789999999999999999999999999999999 9999986554332221 11221 1112234
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
....+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus 489 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 4567889999999999999999999999999865
No 97
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=351.90 Aligned_cols=248 Identities=19% Similarity=0.281 Sum_probs=205.3
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|... ++.||+|++..........+.+|++++++++||||+++++++.+....++||||+++
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~g 132 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG 132 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCC
Confidence 345689999999999999985 788999999877655667899999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC--CCcEEEEeccCCccccCCCCcc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE--KFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~vkL~DFGla~~~~~~~~~~ 718 (870)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++..... .
T Consensus 133 g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~---~ 205 (387)
T 1kob_A 133 GELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---E 205 (387)
T ss_dssp CBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT---S
T ss_pred CcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC---c
Confidence 9999988643 34689999999999999999999998 9999999999999974 477999999999876332 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........+... .... . .......
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i----~~~~-~------~~~~~~~ 274 (387)
T 1kob_A 206 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV----KRCD-W------EFDEDAF 274 (387)
T ss_dssp CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH----HHCC-C------CCCSSTT
T ss_pred ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHH----HhCC-C------CCCcccc
Confidence 223457999999999999999999999999999999999999999875543332221 1111 0 0111111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+||+.||++|||+.|+++
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 233457889999999999999999999986
No 98
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.2e-38 Score=348.21 Aligned_cols=250 Identities=22% Similarity=0.326 Sum_probs=201.9
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-----hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-----QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-----~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
.+.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4556789999999999999985 88999999875422 1356789999999999999999999999999999999
Q ss_pred EEEccCCchhhhhhhcc--cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc---EEEEeccCCc
Q 002887 635 YEFMANGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSR 709 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---vkL~DFGla~ 709 (870)
|||+++|+|.+.+.... ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+|||+++
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 99999999988876542 24589999999999999999999998 9999999999999987655 9999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. ..... .+... .
T Consensus 182 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~----~~~i~-~~~~~--~ 251 (351)
T 3c0i_A 182 QLGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RL----FEGII-KGKYK--M 251 (351)
T ss_dssp ECCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HH----HHHHH-HTCCC--C
T ss_pred EecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HH----HHHHH-cCCCC--C
Confidence 76332 2223456799999999999999999999999999999999999999976422 11 11111 11110 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.+... ......+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQW----SHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred Ccccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 122457889999999999999999999985
No 99
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=351.18 Aligned_cols=268 Identities=22% Similarity=0.282 Sum_probs=212.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCC--eEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGA--NMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++.... ..++||||+
T Consensus 12 ~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~ 91 (396)
T 4eut_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFC 91 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCC
T ss_pred EEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecC
Confidence 45679999999999999986 88999999976532 34567889999999999999999999997755 779999999
Q ss_pred cCCchhhhhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE----cCCCcEEEEeccCCccccC
Q 002887 639 ANGNLQAHLLEDKA-DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL----NEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 639 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~vkL~DFGla~~~~~ 713 (870)
++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++....
T Consensus 92 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~ 168 (396)
T 4eut_A 92 PCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED 168 (396)
T ss_dssp TTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC
T ss_pred CCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC
Confidence 99999999976433 3499999999999999999999998 99999999999999 7888899999999986532
Q ss_pred CCCccccccccCCCCccCcccccc--------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC-
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYIS--------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD- 784 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~- 784 (870)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........+..........
T Consensus 169 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~ 245 (396)
T 4eut_A 169 ---DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245 (396)
T ss_dssp ---GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred ---CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence 222345679999999999865 46788999999999999999999999764432222232333322211
Q ss_pred --cchh---------cccc--cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 785 --IKNI---------VDHR--LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 785 --~~~i---------~d~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
...+ .... ............+.+++.+|++.||++||++.|+++.+++++...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 246 GAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp TCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred ccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 0000 0001 111234567788899999999999999999999999999987653
No 100
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=344.69 Aligned_cols=247 Identities=21% Similarity=0.332 Sum_probs=194.3
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhcc--ccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHH--KNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H--~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||++... ++.||||++.... ....+.+.+|++++.+++| +||+++++++......++||| +
T Consensus 12 ~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~ 90 (343)
T 3dbq_A 12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-C 90 (343)
T ss_dssp EEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-C
T ss_pred EEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-C
Confidence 45689999999999999886 7889999987543 3345778999999999976 999999999999999999999 6
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
.+|+|.+++... ..+++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++.........
T Consensus 91 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 164 (343)
T 3dbq_A 91 GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 164 (343)
T ss_dssp CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccc
Confidence 788999998753 5689999999999999999999998 999999999999997 5789999999998764433333
Q ss_pred ccccccCCCCccCcccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcch
Q 002887 719 VSTTVVGTPGYLDPEYYIS-----------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKN 787 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~-----------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (870)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .. ...
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~-~~~--------- 232 (343)
T 3dbq_A 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SK-LHA--------- 232 (343)
T ss_dssp -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HH-HHH---------
T ss_pred cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH--HH-HHH---------
Confidence 3445689999999999865 678999999999999999999999997543321 11 111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 788 IVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 788 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
++++......+......+.+++.+||+.+|++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 122222222233334568899999999999999999999864
No 101
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=341.68 Aligned_cols=240 Identities=25% Similarity=0.359 Sum_probs=201.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+++.. ++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 9 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~ 88 (318)
T 1fot_A 9 QILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI 88 (318)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCC
Confidence 44579999999999999985 88999999976532 33466789999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 89 ~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----- 158 (318)
T 1fot_A 89 EGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----- 158 (318)
T ss_dssp CSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS-----
T ss_pred CCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC-----
Confidence 999999998643 4689999999999999999999998 999999999999999999999999999986532
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|+|||||++|||++|+.||..........+ ... +. + .++
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~----i~~-~~--------~--~~p 223 (318)
T 1fot_A 159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK----ILN-AE--------L--RFP 223 (318)
T ss_dssp CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HHH-CC--------C--CCC
T ss_pred ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHh-CC--------C--CCC
Confidence 22346799999999999999999999999999999999999999976544332222 221 11 0 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRP-----TMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~ 828 (870)
......+.+++.+|++.+|++|| ++.|+++
T Consensus 224 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 22345788999999999999999 8888874
No 102
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.4e-38 Score=342.92 Aligned_cols=258 Identities=26% Similarity=0.393 Sum_probs=205.0
Q ss_pred hhccccccccCcEEEEEEEE------CCeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecC--CeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL------DDKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEG--ANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~------~~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~--~~~~L 633 (870)
+.+.+.||+|+||.||+|++ .++.||||++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 34567999999999999984 37899999997553 33457789999999999999999999999876 66899
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 103 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 99999999999998653 34689999999999999999999998 999999999999999999999999999987643
Q ss_pred CCCc-cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCC-----------ccchHHHHHHHHhh
Q 002887 714 EGGT-HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTP-----------QRTLIGQWVSSMLA 781 (870)
Q Consensus 714 ~~~~-~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~-----------~~~~l~~~~~~~~~ 781 (870)
.... .......||..|+|||++.+..++.++||||||+++|||++|+.|+.... ......... ....
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 257 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV-NTLK 257 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH-HHHH
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH-HHHh
Confidence 3222 22334568888999999999999999999999999999999999864321 011111111 1111
Q ss_pred cCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 782 RGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 782 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
.+ .....+......+.+++.+|++.+|++|||+.|++++|++++
T Consensus 258 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EG---------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TT---------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc---------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11 112223344567889999999999999999999999999865
No 103
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.5e-37 Score=338.40 Aligned_cols=259 Identities=24% Similarity=0.324 Sum_probs=193.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|... ++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~- 86 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD- 86 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-
Confidence 34578999999999999875 88999999976533 334678899999999999999999999999999999999999
Q ss_pred Cchhhhhhhcc----cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 641 GNLQAHLLEDK----ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 641 gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+|.+++.... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 161 (317)
T 2pmi_A 87 NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-- 161 (317)
T ss_dssp CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC--
T ss_pred CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC--
Confidence 58988886542 24689999999999999999999998 9999999999999999999999999999875322
Q ss_pred ccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccchh-----
Q 002887 717 THVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIKNI----- 788 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~~i----- 788 (870)
........||+.|+|||++.+. .++.++|||||||++|||++|+.||........+.......-... .....
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 241 (317)
T 2pmi_A 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPK 241 (317)
T ss_dssp CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTT
T ss_pred cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhh
Confidence 1223345789999999999764 689999999999999999999999987665444443332211100 00000
Q ss_pred cccccC------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 789 VDHRLQ------------GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 789 ~d~~l~------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..+... ..........+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000000 0001122357889999999999999999999875
No 104
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.9e-38 Score=355.45 Aligned_cols=247 Identities=24% Similarity=0.309 Sum_probs=201.7
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+....++||||++
T Consensus 73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3579999999999999986 78899999976422 233558899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+|+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 153 gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~-~~~~ 225 (410)
T 3v8s_A 153 GGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE-GMVR 225 (410)
T ss_dssp TEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-SEEE
T ss_pred CCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccC-Cccc
Confidence 9999998853 3589999999999999999999998 9999999999999999999999999999876322 2223
Q ss_pred cccccCCCCccCccccccCC----CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 720 STTVVGTPGYLDPEYYISNR----LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~----~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..........++...... +..
T Consensus 226 ~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~-----------~~~ 294 (410)
T 3v8s_A 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS-----------LTF 294 (410)
T ss_dssp CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH-----------CCC
T ss_pred ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc-----------ccC
Confidence 34678999999999998665 789999999999999999999999866544333332211110 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTR--RPTMNQVVIE 829 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~--RPsm~eVl~~ 829 (870)
.........+.+++.+|++.+|++ ||++.||++.
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111123456889999999999998 9999999863
No 105
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-37 Score=334.93 Aligned_cols=255 Identities=27% Similarity=0.378 Sum_probs=203.6
Q ss_pred ccccccccCcEEEEEEEEC-----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeE-EEEEEE
Q 002887 565 FERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANM-GLIYEF 637 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~-~LV~Ey 637 (870)
..+.||+|+||.||+|.+. +..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 3478999999999999863 2369999987643 34557889999999999999999999999876655 999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC--
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG-- 715 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~-- 715 (870)
+.+|+|.+++.. ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 105 MCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 999999999865 345789999999999999999999998 99999999999999999999999999998653221
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.........+++.|+|||.+.+..++.++||||||+++|||++|..|+.............. .+. ..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~----~~~---------~~ 247 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA----QGR---------RL 247 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH----TTC---------CC
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh----cCC---------CC
Confidence 11122345678899999999999999999999999999999996555443333333222211 111 11
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
..+......+.+++.+|++.+|++|||+.|++++|++++..
T Consensus 248 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 248 PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11223345788999999999999999999999999997643
No 106
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-37 Score=343.04 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=198.8
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc-----hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-----VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
+.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 107 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVM 107 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEE
Confidence 445689999999999999985 7789999987542 344578999999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhc--------------------------------------ccccccHHHHHHHHHHHHHHHHHHHhC
Q 002887 636 EFMANGNLQAHLLED--------------------------------------KADTLCWERRLQIASESAQGLEYLHNG 677 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~aL~yLH~~ 677 (870)
||+++|+|.+++... ....+++..+..++.|+++||+|||+.
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 187 (345)
T 3hko_A 108 ELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ 187 (345)
T ss_dssp ECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999988421 022356788899999999999999999
Q ss_pred CCCCceeCCCCCCCEEEcCCC--cEEEEeccCCccccCCCCc--cccccccCCCCccCcccccc--CCCCccchHHHHHH
Q 002887 678 CKPPIVHRDVKSANILLNEKF--QAKLADFGLSRIFPVEGGT--HVSTTVVGTPGYLDPEYYIS--NRLTEKSDVYSFGV 751 (870)
Q Consensus 678 ~~~~IvHrDLKp~NILld~~~--~vkL~DFGla~~~~~~~~~--~~~~~~~gt~~y~APE~~~~--~~~~~ksDVwS~Gv 751 (870)
+|+||||||+|||++.++ .+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||
T Consensus 188 ---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 188 ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp ---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred ---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 999999999999998776 8999999999865332211 12345679999999999975 67899999999999
Q ss_pred HHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 752 VLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 752 vL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
++|||++|+.||..........+. ...... ... .........+.+++.+|++.+|++||++.|+++
T Consensus 265 il~el~~g~~pf~~~~~~~~~~~~----~~~~~~--~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVNDADTISQV----LNKKLC--FEN-----PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHH----HHCCCC--TTS-----GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCCCCCChHHHHHHH----Hhcccc--cCC-----cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 999999999999876554433322 111100 000 001123457889999999999999999999986
No 107
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.8e-38 Score=347.81 Aligned_cols=242 Identities=25% Similarity=0.385 Sum_probs=201.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. ++.||+|+++... ....+.+..|..++.++ +||||+++++++.+....++||||
T Consensus 20 ~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~ 99 (345)
T 1xjd_A 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEY 99 (345)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence 34689999999999999986 8899999998653 23345678899999987 999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 100 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 172 (345)
T 1xjd_A 100 LNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--D 172 (345)
T ss_dssp CTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--T
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC--C
Confidence 9999999998643 4689999999999999999999998 9999999999999999999999999999854222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||++.+..++.++|+|||||++|||++|+.||........... ... +. ..+
T Consensus 173 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~----i~~-~~----------~~~ 237 (345)
T 1xjd_A 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS----IRM-DN----------PFY 237 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHH-CC----------CCC
T ss_pred CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHh-CC----------CCC
Confidence 224556899999999999999999999999999999999999999986554332222 111 11 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMN-QVV 827 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~-eVl 827 (870)
+......+.+++.+|++.+|++||++. |++
T Consensus 238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 222345788999999999999999997 654
No 108
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=337.45 Aligned_cols=260 Identities=24% Similarity=0.312 Sum_probs=202.7
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-----hhhHHHHHHHHHHHHhc---cccceeEEEEEecCC--
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-----QGYKQFQAEVELLIRAH---HKNLTILVGYCDEGA-- 629 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-----~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~-- 629 (870)
.+.+.+.||+|+||.||+|+.. ++.||||++..... .....+.+|++++++++ ||||+++++++....
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~ 89 (308)
T 3g33_A 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTD 89 (308)
T ss_dssp CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSS
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCC
Confidence 3455689999999999999964 88999999875421 12346678888877775 999999999997655
Q ss_pred ---eEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEecc
Q 002887 630 ---NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFG 706 (870)
Q Consensus 630 ---~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFG 706 (870)
..++||||+. |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 165 (308)
T 3g33_A 90 REIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFG 165 (308)
T ss_dssp SEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCS
T ss_pred CceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCc
Confidence 4789999998 5999999776666699999999999999999999999 99999999999999999999999999
Q ss_pred CCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--C
Q 002887 707 LSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--D 784 (870)
Q Consensus 707 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~ 784 (870)
+++..... .......||+.|+|||++.+..++.++|||||||++|||++|++||........+.+.....-... .
T Consensus 166 ~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 166 LARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp CTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 99865322 223456799999999999999999999999999999999999999987665555444433221110 0
Q ss_pred cch---hcccccCC--CC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 IKN---IVDHRLQG--DF-----DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 ~~~---i~d~~l~~--~~-----~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
... .....+.. .. ..+....+.+++.+|++.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000 00000000 00 0123457889999999999999999999875
No 109
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.1e-37 Score=334.25 Aligned_cols=258 Identities=19% Similarity=0.244 Sum_probs=198.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++.++...++||||++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 84 (292)
T 3o0g_A 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC
Confidence 34578999999999999985 78899999976532 334678899999999999999999999999999999999998
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+ ++.+.+.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 85 ~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 157 (292)
T 3o0g_A 85 Q-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--VRC 157 (292)
T ss_dssp E-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--CSC
T ss_pred C-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc--ccc
Confidence 6 55555543 235799999999999999999999999 9999999999999999999999999999865322 222
Q ss_pred cccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCC-ccchHHHHHHHHhhc--CCcc---hhcccc
Q 002887 720 STTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTP-QRTLIGQWVSSMLAR--GDIK---NIVDHR 792 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~-~~~~l~~~~~~~~~~--~~~~---~i~d~~ 792 (870)
.....||+.|+|||++.+.. ++.++|||||||+++||++|+.|+.... ....+.......... .... ...+..
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 34567899999999998766 8999999999999999999888864443 333333322221111 0000 000000
Q ss_pred ---------cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 793 ---------LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 793 ---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
............+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000111234567889999999999999999999975
No 110
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.2e-38 Score=342.11 Aligned_cols=256 Identities=27% Similarity=0.387 Sum_probs=196.5
Q ss_pred hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCe-----
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN----- 630 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~----- 630 (870)
+.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 345678999999999999864 3479999987542 3445678999999999999999999999977553
Q ss_pred EEEEEEEccCCchhhhhhhc----ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEecc
Q 002887 631 MGLIYEFMANGNLQAHLLED----KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFG 706 (870)
Q Consensus 631 ~~LV~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFG 706 (870)
.++||||+++|+|.+++... ....+++..++.++.|+++||.|||+. +|+||||||+||++++++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 49999999999999988542 335799999999999999999999998 99999999999999999999999999
Q ss_pred CCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 707 LSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 707 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||............ . .+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~----~-~~~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL----L-HGHR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH----H-TTCC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH----H-cCCC
Confidence 9987643322223344567889999999999999999999999999999999 88999766544332221 1 1110
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
..........+.+++.+|++.+|++|||+.++++.|++++.
T Consensus 268 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 268 ---------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp ---------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11122344578899999999999999999999999998764
No 111
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.4e-37 Score=334.63 Aligned_cols=258 Identities=20% Similarity=0.299 Sum_probs=199.1
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|++++++++||||+++++++......++||||+++
T Consensus 5 ~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (288)
T 1ob3_A 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE
T ss_pred hhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC
Confidence 34578999999999999987 88999999976532 2346788999999999999999999999999999999999985
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
+|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 85 -~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 157 (288)
T 1ob3_A 85 -DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKY 157 (288)
T ss_dssp -EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred -CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc--cccc
Confidence 888887543 35689999999999999999999998 9999999999999999999999999999865321 1223
Q ss_pred ccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccch-----hcccc
Q 002887 721 TTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIKN-----IVDHR 792 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~~-----i~d~~ 792 (870)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||........+.+.....-... .... ..++.
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 345789999999999764 589999999999999999999999987665444443332211110 0000 00111
Q ss_pred cC-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 793 LQ-------GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 793 l~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. ..........+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 10 0011223467789999999999999999999875
No 112
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.8e-37 Score=340.84 Aligned_cols=244 Identities=25% Similarity=0.367 Sum_probs=192.2
Q ss_pred hhccccccccCcEEEEEEEE-----CCeeEEEEEeeccc----hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL-----DDKQVAVKMLSSSS----VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+++. .++.||+|+++... ......+.+|++++++++||||+++++++......++
T Consensus 19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 98 (327)
T 3a62_A 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL 98 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence 34568999999999999987 37899999997653 2334567899999999999999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+++|+|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 173 (327)
T 3a62_A 99 ILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH 173 (327)
T ss_dssp EEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred EEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence 99999999999998643 4688999999999999999999998 999999999999999999999999999975422
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. +.
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i----~~-~~--------- 237 (327)
T 3a62_A 174 D--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI----LK-CK--------- 237 (327)
T ss_dssp -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH----HH-TC---------
T ss_pred C--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHH----Hh-CC---------
Confidence 2 12234567999999999999999999999999999999999999999865543332221 11 11
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRP-----TMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~ 828 (870)
...+......+.+++.+|++.+|++|| ++.|+++
T Consensus 238 -~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 -LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 011223345788999999999999999 6777765
No 113
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.3e-37 Score=343.02 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=205.0
Q ss_pred hhccccccccCcEEEEEEEEC-------CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
+.+.+.||+|+||.||+|++. ++.||||++... ......++.+|+.++++++||||+++++++......++|
T Consensus 32 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (327)
T 2yfx_A 32 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL 111 (327)
T ss_dssp CEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEE
Confidence 445689999999999999842 567999999754 334556789999999999999999999999999999999
Q ss_pred EEEccCCchhhhhhhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEecc
Q 002887 635 YEFMANGNLQAHLLEDKA-----DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFG 706 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFG 706 (870)
|||+++|+|.+++..... ..+++..++.++.|++.||.|||+. +|+||||||+|||++. +..+||+|||
T Consensus 112 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECccc
Confidence 999999999999976532 4589999999999999999999998 9999999999999994 4469999999
Q ss_pred CCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 707 LSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 707 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
+++...............|++.|+|||++.+..++.++||||||+++|||++ |+.||.......... . +..+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~-~~~~~~ 263 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE----F-VTSGGR 263 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH----H-HHTTCC
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHH----H-HhcCCC
Confidence 9986543332233344568899999999999999999999999999999998 999997654332211 1 111111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
..........+.+++.+||+.+|++||++.|+++.|+.+...
T Consensus 264 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 264 ---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 111223345788999999999999999999999999987654
No 114
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.6e-37 Score=341.10 Aligned_cols=243 Identities=22% Similarity=0.337 Sum_probs=197.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+++.. ++.||+|++.... ....+.+.+|..++.++ +||||+++++++......++||||
T Consensus 12 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~ 91 (345)
T 3a8x_A 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEY 91 (345)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeC
Confidence 44579999999999999986 8899999998653 23445688999999998 899999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++..... .
T Consensus 92 ~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~--~ 164 (345)
T 3a8x_A 92 VNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--G 164 (345)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT--T
T ss_pred CCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC--C
Confidence 9999999988643 4689999999999999999999998 9999999999999999999999999999854222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccc----hHHHHHHHHhhcCCcchhccccc
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRT----LIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~----~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............+..
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-------- 236 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-------- 236 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC--------
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC--------
Confidence 23345689999999999999999999999999999999999999997532111 011111111111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTM 823 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm 823 (870)
.++......+.+++.+||+.+|++||++
T Consensus 237 --~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 237 --RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred --CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1222344578899999999999999995
No 115
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.1e-37 Score=334.05 Aligned_cols=257 Identities=25% Similarity=0.399 Sum_probs=205.8
Q ss_pred ccc-cccccCcEEEEEEEEC----CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 565 FER-VLGKGGFGTVYHGYLD----DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 565 f~~-~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+ .||+|+||.||+|.+. ++.||||++..... ...+++.+|++++++++||||+++++++ .....++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 344 8999999999999652 57899999976532 3356799999999999999999999999 56778999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++++|.+++... ..+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 99 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (291)
T 1xbb_A 99 AELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173 (291)
T ss_dssp CTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred CCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc
Confidence 9999999999653 4689999999999999999999998 9999999999999999999999999999876433222
Q ss_pred c-ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 718 H-VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 718 ~-~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... ..+..+.. .
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~~---------~ 239 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGER---------M 239 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCC---------C
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH-----HHHHcCCC---------C
Confidence 1 1223456789999999998889999999999999999999 99999865543221 11222211 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhHhhh
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIART 841 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~~~~ 841 (870)
..+......+.+++.+|++.+|++||++.||++.|+++........
T Consensus 240 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 285 (291)
T 1xbb_A 240 GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG 285 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence 1223345678899999999999999999999999999887654443
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.8e-37 Score=336.76 Aligned_cols=254 Identities=29% Similarity=0.438 Sum_probs=201.5
Q ss_pred hccccccccCcEEEEEEEEC-----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEe-cCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCD-EGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~-~~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|... ...+|+|.+.... ....+.+.+|++++++++||||++++++|. .+...++|||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e 107 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 107 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence 45689999999999999864 2358999987643 345577899999999999999999999864 4567899999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++.. ....+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 108 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 108 YMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp CCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred CCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 9999999999864 335689999999999999999999998 999999999999999999999999999986532211
Q ss_pred --ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 717 --THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 717 --~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
........+|+.|+|||.+.+..++.++||||||++++||++ |.+||............ . .+..
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----~-~~~~-------- 250 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----L-QGRR-------- 250 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHH----H-TTCC--------
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHH----h-cCCC--------
Confidence 112234567889999999999999999999999999999999 55666654443322221 1 1110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...+......+.+++.+|++.+|++|||+.|++++|++++.
T Consensus 251 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 251 -LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01112234568899999999999999999999999999765
No 117
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.5e-37 Score=348.57 Aligned_cols=248 Identities=20% Similarity=0.316 Sum_probs=195.7
Q ss_pred hhccccccccCcEEEEEEEEC-CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhc--cccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAH--HKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.+.||+|+||.||++... ++.||||++.... ....+.+.+|++++.+++ |+||+++++++......++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 345679999999999999886 7889999997643 344577899999999996 5999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+.+++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 137 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 6788999998754 4788999999999999999999998 999999999999996 579999999999876433333
Q ss_pred cccccccCCCCccCcccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcc
Q 002887 718 HVSTTVVGTPGYLDPEYYIS-----------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIK 786 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~-----------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~ 786 (870)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~------- 280 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAI------- 280 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHH-------
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHH-------
Confidence 33445689999999999865 368899999999999999999999997643221 111111
Q ss_pred hhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 787 NIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 787 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
+++......+......+.+++.+||+.+|++|||+.|+++.
T Consensus 281 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 --IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22222122222224568899999999999999999999864
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=344.34 Aligned_cols=245 Identities=25% Similarity=0.369 Sum_probs=186.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|+.. ++.||||++.... ..+.+.+|++++++++||||+++++++......++||||+++|
T Consensus 56 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~ 133 (349)
T 2w4o_A 56 EVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG 133 (349)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCC
Confidence 44679999999999999986 6789999997653 3466889999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCCcc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~~~ 718 (870)
+|.+++... ..+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++..... .
T Consensus 134 ~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~---~ 205 (349)
T 2w4o_A 134 ELFDRIVEK--GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---V 205 (349)
T ss_dssp BHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc---c
Confidence 999988643 4689999999999999999999998 9999999999999975 889999999999865321 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..... +... ......
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~~i~~-~~~~------~~~~~~ 275 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF---RRILN-CEYY------FISPWW 275 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH---HHHHT-TCCC------CCTTTT
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH---HHHHh-CCCc------cCCchh
Confidence 2345679999999999999999999999999999999999999997654432211 11111 1110 011111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+|++.||++|||+.|+++
T Consensus 276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 234557889999999999999999999876
No 119
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6e-37 Score=329.04 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=202.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|... +..+|+|++........+.+.+|++++++++||||+++++++.+....++||||+++
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (277)
T 3f3z_A 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTG 90 (277)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCC
Confidence 445689999999999999986 668999999877666678899999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCCCCc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~~~~ 717 (870)
++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 91 ~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~--- 162 (277)
T 3f3z_A 91 GELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--- 162 (277)
T ss_dssp CBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT---
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc---
Confidence 9999988643 4689999999999999999999998 99999999999999 78899999999999865322
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||.+.+. ++.++||||||++++||++|+.||...........+ ..+... ......
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~-~~~~~~---- 231 (277)
T 3f3z_A 163 KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI-----REGTFT-FPEKDW---- 231 (277)
T ss_dssp SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHCCCC-CCHHHH----
T ss_pred cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH-----HhCCCC-CCchhh----
Confidence 223455799999999998654 899999999999999999999999875543332221 111110 000000
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+|++.+|++|||+.|+++
T Consensus 232 -~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 232 -LNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -hcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 022457889999999999999999999986
No 120
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.7e-37 Score=335.62 Aligned_cols=260 Identities=22% Similarity=0.311 Sum_probs=198.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeecc---chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS---SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.+.||+|+||.||+|... ++.||||++... .....+.+.+|++++++++||||+++++++......++||||
T Consensus 34 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 113 (310)
T 2wqm_A 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL 113 (310)
T ss_dssp EEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEec
Confidence 345689999999999999974 889999999753 234456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 638 MANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 638 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
+++|+|.+++... ....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 114 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~- 189 (310)
T 2wqm_A 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK- 189 (310)
T ss_dssp CCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred CCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC-
Confidence 9999999988653 245689999999999999999999998 9999999999999999999999999999865322
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........|++.|+|||++.+..++.++||||||+++|||++|+.||...... ...+... ...+....
T Consensus 190 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~-~~~~~~~~-------- 257 (310)
T 2wqm_A 190 -TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN--LYSLCKK-IEQCDYPP-------- 257 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC--HHHHHHH-HHTTCSCC--------
T ss_pred -CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh--HHHHHHH-hhcccCCC--------
Confidence 12223457899999999999999999999999999999999999999754321 1122211 11111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEI 838 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~ 838 (870)
.........+.+++.+|++.||++|||+.||++.|+++.+...
T Consensus 258 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 258 LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 0112234578899999999999999999999999999775543
No 121
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.3e-37 Score=345.13 Aligned_cols=243 Identities=25% Similarity=0.350 Sum_probs=200.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. ++.||+|++.... ....+.+..|..++..+ +||+|+++++++.+....++||||
T Consensus 23 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~ 102 (353)
T 2i0e_A 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY 102 (353)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeC
Confidence 45689999999999999986 6789999998653 23446678899999887 899999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 103 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~ 175 (353)
T 2i0e_A 103 VNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--G 175 (353)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--T
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC--C
Confidence 9999999998643 4689999999999999999999998 9999999999999999999999999999854222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||++.+..++.++|+|||||++|||++|+.||........... ... +. ..+
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~----i~~-~~----------~~~ 240 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IME-HN----------VAY 240 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHH-CC----------CCC
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHH----HHh-CC----------CCC
Confidence 233456899999999999999999999999999999999999999986554332222 221 11 112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPT-----MNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~ 828 (870)
+......+.+++.+|++.+|++||+ ++|+++
T Consensus 241 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2234467889999999999999995 466654
No 122
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.6e-37 Score=338.96 Aligned_cols=261 Identities=21% Similarity=0.291 Sum_probs=207.1
Q ss_pred cccCHHHHHHHHhhcc-ccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHh-ccccceeEEEE
Q 002887 551 RKFSYFDVLKITNNFE-RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRA-HHKNLTILVGY 624 (870)
Q Consensus 551 ~~~~~~dl~~~t~~f~-~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l-~H~nIv~l~g~ 624 (870)
..|...+.....+.+. +.||+|+||.||+|... ++.||+|++..... .....+.+|+.++.++ +||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344444444444444 78999999999999986 88999999986533 3356789999999999 56999999999
Q ss_pred EecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEE
Q 002887 625 CDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAK 701 (870)
Q Consensus 625 ~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vk 701 (870)
+.+....++||||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998766667899999999999999999999998 9999999999999998 78999
Q ss_pred EEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhh
Q 002887 702 LADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLA 781 (870)
Q Consensus 702 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~ 781 (870)
|+|||+++..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 175 L~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---- 247 (327)
T 3lm5_A 175 IVDFGMSRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ---- 247 (327)
T ss_dssp ECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH----
T ss_pred EeeCccccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHh----
Confidence 9999999876322 222346799999999999999999999999999999999999999987654333222111
Q ss_pred cCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 782 RGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 782 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. ..............+.+++.+|++.+|++|||+.|+++
T Consensus 248 -~~------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 248 -VN------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp -TC------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -cc------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00 00111112234456889999999999999999999975
No 123
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=339.35 Aligned_cols=245 Identities=22% Similarity=0.251 Sum_probs=192.1
Q ss_pred HHHHhhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887 559 LKITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 559 ~~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L 633 (870)
....+...+.||+|+||+||+|+.. ++.||||++.... .....++..|+..+.++ +|+||++++++|.++...++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3344556689999999999999986 8899999986542 23334556666666665 99999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+ +++|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 135 v~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 99999 66888887654 35699999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
........||+.|+|||++.+ .++.++|||||||++|||++|..|+..... .. .+..+.... .+
T Consensus 210 ---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~-----~~~~~~~~~----~~ 273 (311)
T 3p1a_A 210 ---AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQ-----QLRQGYLPP----EF 273 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HH-----HHTTTCCCH----HH
T ss_pred ---CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HH-----HHhccCCCc----cc
Confidence 222345579999999999875 789999999999999999999776643211 11 111111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.......+.+++.+|++.+|++|||+.|+++
T Consensus 274 ----~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 274 ----TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1123457889999999999999999999985
No 124
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=368.28 Aligned_cols=250 Identities=22% Similarity=0.393 Sum_probs=202.6
Q ss_pred cccccCcEEEEEEEEC----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887 568 VLGKGGFGTVYHGYLD----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 568 ~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
.||+|+||.||+|.+. +..||||+++... ....++|.+|++++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999873 4579999998653 3356789999999999999999999999976 56899999999999
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc-ccc
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH-VST 721 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~-~~~ 721 (870)
|.+++... ...+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+....... ...
T Consensus 422 L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 99998653 45699999999999999999999998 99999999999999999999999999998764322111 122
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||.......... .+..+. ....+..
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~-----~i~~~~---------~~~~p~~ 563 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-----FIEQGK---------RMECPPE 563 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHH-----HHHTTC---------CCCCCTT
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCC---------CCCCCCc
Confidence 3346789999999999999999999999999999998 999998765433221 122221 1122334
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
....+.+++.+||+.+|++||++.+|++.|+++...
T Consensus 564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 556788999999999999999999999999987643
No 125
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=342.47 Aligned_cols=261 Identities=20% Similarity=0.219 Sum_probs=196.9
Q ss_pred hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccchh-----------hhHHHHHHHHHHHHhccccceeEEEEEe
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSSVQ-----------GYKQFQAEVELLIRAHHKNLTILVGYCD 626 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~~~-----------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 626 (870)
+.+.+.||+|+||.||+|... +..+|||+....... ....+.+|+..+..++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 345689999999999999984 578999998765321 1234667888899999999999999998
Q ss_pred c----CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC--cE
Q 002887 627 E----GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF--QA 700 (870)
Q Consensus 627 ~----~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~--~v 700 (870)
. ....++||||+ +++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++ .+
T Consensus 119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 119 TEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSE
T ss_pred cccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcE
Confidence 7 77899999999 999999986543 799999999999999999999998 999999999999999887 99
Q ss_pred EEEeccCCccccCCCC-----ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002887 701 KLADFGLSRIFPVEGG-----THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 701 kL~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~ 775 (870)
||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 9999999987633211 11124557999999999999999999999999999999999999999643222221121
Q ss_pred HHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887 776 VSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC 833 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~ 833 (870)
........ ....+..... .......+.+++.+|++.+|++||++.+|++.|++.
T Consensus 273 ~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 273 AKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 22111111 1111111110 112345788999999999999999999999999874
No 126
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=343.27 Aligned_cols=262 Identities=23% Similarity=0.372 Sum_probs=195.2
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHH--HHHhccccceeEEEEEe-----cCCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVEL--LIRAHHKNLTILVGYCD-----EGANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~--l~~l~H~nIv~l~g~~~-----~~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|+..++.||||++..... ..+..|.++ +..++|+||+++++.+. .....++|||
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e 92 (336)
T 3g2f_A 16 KLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVME 92 (336)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEEC
T ss_pred heeeecccCCCeEEEEEEECCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEe
Confidence 3457999999999999999999999999975432 334444444 45589999999998653 2335789999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCC------CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC------KPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
|+++|+|.+++.. ...++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 93 YYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 9999999999954 34589999999999999999999763 33899999999999999999999999999987
Q ss_pred ccCCCC------ccccccccCCCCccCcccccc-------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccch------
Q 002887 711 FPVEGG------THVSTTVVGTPGYLDPEYYIS-------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL------ 771 (870)
Q Consensus 711 ~~~~~~------~~~~~~~~gt~~y~APE~~~~-------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~------ 771 (870)
+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.|+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 643211 112234579999999999976 3566789999999999999999777644321110
Q ss_pred --------HHHHHHHHhhcCCcchhcccccCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 772 --------IGQWVSSMLARGDIKNIVDHRLQGD--FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 772 --------l~~~~~~~~~~~~~~~i~d~~l~~~--~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
...+ ......... .+.+... ........+.+++.+||+.+|++|||+.|+++.|++++..
T Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 250 TEVGNHPTFEDM-QVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp HHHCSSCCHHHH-HHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccCCCchHHHH-Hhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 0111 111111111 1111111 1234667899999999999999999999999999997733
No 127
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-37 Score=342.90 Aligned_cols=242 Identities=24% Similarity=0.340 Sum_probs=199.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|+++++.++||||+++++++......++||||+
T Consensus 12 ~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 91 (336)
T 3h4j_B 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA 91 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC
Confidence 45689999999999999984 88999999976422 23457899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
+|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++...... .
T Consensus 92 -~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~---~ 162 (336)
T 3h4j_B 92 -GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG---N 162 (336)
T ss_dssp -CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS---B
T ss_pred -CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC---c
Confidence 68998888653 4689999999999999999999999 9999999999999999999999999999865322 2
Q ss_pred ccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... ..+.... ...
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-------------~~i~~~~--~~~ 227 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-------------KKVNSCV--YVM 227 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-------------CCCCSSC--CCC
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-------------HHHHcCC--CCC
Confidence 2345679999999999988775 78999999999999999999999764322110 0010000 112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
+......+.+++.+|++.||++|||+.|+++.
T Consensus 228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 23345678899999999999999999999863
No 128
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.6e-37 Score=344.84 Aligned_cols=249 Identities=20% Similarity=0.285 Sum_probs=194.0
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+++.. ++.||||++..... ..+.+.+|+.++++++||||+++++++......++||||+++
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 100 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASG 100 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCC
Confidence 345689999999999999986 88999999976532 346788999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc--EEEEeccCCccccCCCCcc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ--AKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--vkL~DFGla~~~~~~~~~~ 718 (870)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++..... .
T Consensus 101 ~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~---~ 172 (361)
T 3uc3_A 101 GELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH---S 172 (361)
T ss_dssp CBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---C
Confidence 9999988643 4699999999999999999999998 9999999999999988775 999999999743211 2
Q ss_pred ccccccCCCCccCccccccCCCCcc-chHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEK-SDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~k-sDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||..........+......... .....
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~---------~~~~~ 243 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK---------YSIPD 243 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC---------CCCCT
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC---------CCCCC
Confidence 2234579999999999988887665 8999999999999999999987665444444443333211 11111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
.......+.+++.+||+.+|++|||+.|+++.
T Consensus 244 ~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11234567899999999999999999999863
No 129
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=342.64 Aligned_cols=259 Identities=16% Similarity=0.169 Sum_probs=205.5
Q ss_pred hccccccccCcEEEEEEEEC----------CeeEEEEEeeccchhhhHHHHHHHHHHHHhcccccee-------------
Q 002887 564 NFERVLGKGGFGTVYHGYLD----------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTI------------- 620 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~----------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~------------- 620 (870)
.+.+.||+|+||.||+|+.. ++.||||++... +.+.+|++++++++||||++
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i 119 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAI 119 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSC
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCc
Confidence 45689999999999999874 578999998754 46889999999999999987
Q ss_pred --EEEEEec-CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887 621 --LVGYCDE-GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK 697 (870)
Q Consensus 621 --l~g~~~~-~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~ 697 (870)
+++++.. ....++||||+ +++|.+++.......+++..++.++.|++.||+|||++ +|+||||||+|||++.+
T Consensus 120 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 120 PTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPE 195 (352)
T ss_dssp CCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEETT
T ss_pred cchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcCC
Confidence 6777765 67889999999 99999999866557899999999999999999999999 99999999999999999
Q ss_pred C--cEEEEeccCCccccCCCCc-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCC-cc
Q 002887 698 F--QAKLADFGLSRIFPVEGGT-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTP-QR 769 (870)
Q Consensus 698 ~--~vkL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~-~~ 769 (870)
+ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 8 9999999999866432211 11234579999999999999999999999999999999999999998654 22
Q ss_pred chHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 770 TLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 770 ~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
..+.......... ...+.+.... .......+.+++.+|++.+|++||++.||+++|++++..
T Consensus 276 ~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 276 EDIMKQKQKFVDK--PGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp HHHHHHHHHHHHS--CCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCC--hhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 2222222222111 1111111100 112246788999999999999999999999999997644
No 130
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.9e-37 Score=330.09 Aligned_cols=247 Identities=23% Similarity=0.359 Sum_probs=202.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 88 (284)
T 3kk8_A 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 88 (284)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred hhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCC
Confidence 34579999999999999986 7899999997653 3345678899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc---EEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---vkL~DFGla~~~~~~~~ 716 (870)
+++|.+.+... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++......
T Consensus 89 ~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~-- 161 (284)
T 3kk8_A 89 GGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-- 161 (284)
T ss_dssp SCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS--
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC--
Confidence 99999888643 4689999999999999999999998 9999999999999987665 999999999765322
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
.......|++.|+|||++.+..++.++||||||+++++|++|+.||............. .+... ....
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~-----~~~~~------~~~~ 229 (284)
T 3kk8_A 162 -EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK-----AGAYD------YPSP 229 (284)
T ss_dssp -CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----HTCCC------CCTT
T ss_pred -ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHH-----hcccc------CCch
Confidence 22334679999999999999999999999999999999999999997655433322221 11110 0001
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
........+.+++.+|++.+|++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 230 EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 112234568899999999999999999999873
No 131
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.2e-37 Score=349.06 Aligned_cols=245 Identities=22% Similarity=0.325 Sum_probs=188.9
Q ss_pred ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHH-hccccceeEEEEEec----CCeEEEEEEEcc
Q 002887 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIR-AHHKNLTILVGYCDE----GANMGLIYEFMA 639 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~-l~H~nIv~l~g~~~~----~~~~~LV~Ey~~ 639 (870)
+.||+|+||.||++... ++.||||++... ..+.+|++++.+ .+||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999986 788999998643 456788888755 489999999998865 567899999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~ 716 (870)
+|+|.+++.......+++..+..|+.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++.....
T Consensus 143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~-- 217 (400)
T 1nxk_A 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-- 217 (400)
T ss_dssp SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCC--
Confidence 99999999765556799999999999999999999998 9999999999999998 789999999999865321
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............. ..+..+... +...
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~-~~i~~~~~~------~~~~ 289 (400)
T 1nxk_A 218 -NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-TRIRMGQYE------FPNP 289 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH-HHHHHTCCC------CCTT
T ss_pred -CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH-HHHHcCccc------CCCc
Confidence 22345678999999999999999999999999999999999999997654322100000 111111110 0001
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
........+.+++.+||+.||++|||+.|+++.
T Consensus 290 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 290 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 112334578899999999999999999999874
No 132
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.3e-37 Score=330.71 Aligned_cols=246 Identities=24% Similarity=0.376 Sum_probs=203.9
Q ss_pred HHHhhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec----------
Q 002887 560 KITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE---------- 627 (870)
Q Consensus 560 ~~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~---------- 627 (870)
...+...+.||+|+||.||+|... ++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 334455689999999999999986 8899999997653 467899999999999999999998854
Q ss_pred ------CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEE
Q 002887 628 ------GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAK 701 (870)
Q Consensus 628 ------~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vk 701 (870)
....++||||+++|+|.+++.......+++..++.++.|++.||.|||+. +|+||||||+||++++++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 44578999999999999999876667899999999999999999999998 999999999999999999999
Q ss_pred EEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhh
Q 002887 702 LADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLA 781 (870)
Q Consensus 702 L~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~ 781 (870)
|+|||++....... ......|++.|+|||++.+..++.++||||||+++|||++|..|+... ..+.. .+.
T Consensus 163 l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------~~~~~-~~~ 232 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------SKFFT-DLR 232 (284)
T ss_dssp ECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------HHHHH-HHH
T ss_pred ECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------HHHHH-Hhh
Confidence 99999998764322 223457999999999999999999999999999999999999886421 11111 111
Q ss_pred cCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 782 RGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 782 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
.+.. .......+.+++.+|++.+|++|||+.|+++.|+.+.
T Consensus 233 ~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 233 DGII------------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp TTCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cccc------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1111 1122345779999999999999999999999998764
No 133
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-39 Score=354.11 Aligned_cols=257 Identities=24% Similarity=0.353 Sum_probs=187.1
Q ss_pred hhccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHH--hccccceeEEEEEecCC----eEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIR--AHHKNLTILVGYCDEGA----NMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~--l~H~nIv~l~g~~~~~~----~~~LV~E 636 (870)
+.+.+.||+|+||.||+|+..++.||||++.... ...+.+|.+++.. ++||||+++++++.... ..++|||
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 5 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp CCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred eeehhhccCCCCeEEEEEEEcCcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 3456899999999999999999999999986543 3566778888877 79999999999998766 7899999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHH--------hCCCCCceeCCCCCCCEEEcCCCcEEEEeccCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLH--------NGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH--------~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla 708 (870)
|+++|+|.+++.. ..+++..++.++.|++.||+||| +. +|+||||||+|||++.++.+||+|||++
T Consensus 82 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCCHHHHHHH---CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred ccCCCCHHHHHhc---cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999953 36888999999999999999999 66 9999999999999999999999999999
Q ss_pred ccccCCCCcc--ccccccCCCCccCccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCCCCccc
Q 002887 709 RIFPVEGGTH--VSTTVVGTPGYLDPEYYISN------RLTEKSDVYSFGVVLLELITG----------QPVIQKTPQRT 770 (870)
Q Consensus 709 ~~~~~~~~~~--~~~~~~gt~~y~APE~~~~~------~~~~ksDVwS~GvvL~elltG----------~~p~~~~~~~~ 770 (870)
+......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664332221 12334799999999999876 344689999999999999999 56664432111
Q ss_pred -hHHHHHHHHhhcCCcchhcccccCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 771 -LIGQWVSSMLARGDIKNIVDHRLQGDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 771 -~l~~~~~~~~~~~~~~~i~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
....+... +....+....+ ......+.+++.+||+.||++|||+.||+++|+++...+
T Consensus 236 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEMRKV---------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-CHHH---------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHHHHH---------HHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 00111111 11112222222 266778999999999999999999999999999876543
No 134
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.7e-37 Score=370.10 Aligned_cols=249 Identities=25% Similarity=0.415 Sum_probs=201.5
Q ss_pred ccccccCcEEEEEEEEC----CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 567 RVLGKGGFGTVYHGYLD----DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.||+|+||.||+|.+. ++.||||+++.... ...+++.+|++++++++||||++++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 57899999986533 335789999999999999999999999965 568899999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc-cc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT-HV 719 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~-~~ 719 (870)
|+|.+++.. ...+++..++.|+.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+...... ..
T Consensus 454 g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 999999964 35689999999999999999999998 9999999999999999999999999999876433221 22
Q ss_pred cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 720 STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+..+. ....+
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~-----~~i~~~~---------~~~~p 594 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGE---------RMGCP 594 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTC---------CCCCC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHcCC---------CCCCC
Confidence 233457789999999999999999999999999999998 99999876543322 1122221 11223
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
......+.+++.+||+.+|++||++.+|+++|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 3445678899999999999999999999999998653
No 135
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.4e-37 Score=344.74 Aligned_cols=240 Identities=22% Similarity=0.329 Sum_probs=201.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+++.. ++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 44 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 123 (350)
T 1rdq_E 44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123 (350)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 34579999999999999985 88999999976532 33467889999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 ~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~---- 194 (350)
T 1rdq_E 124 AGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR---- 194 (350)
T ss_dssp TTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC----
Confidence 999999998653 4689999999999999999999998 9999999999999999999999999999865321
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ . .+.. .++
T Consensus 195 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~-~~~~----------~~p 258 (350)
T 1rdq_E 195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI----V-SGKV----------RFP 258 (350)
T ss_dssp -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-HCCC----------CCC
T ss_pred -cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHH----H-cCCC----------CCC
Confidence 23467999999999999999999999999999999999999999865443322221 1 1111 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPT-----MNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~ 828 (870)
......+.+++.+|++.||++||+ +.|+++
T Consensus 259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 233457889999999999999998 777764
No 136
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-37 Score=330.75 Aligned_cols=241 Identities=22% Similarity=0.349 Sum_probs=178.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|+.. ++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 16 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (275)
T 2eue_A 16 QIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA 95 (275)
T ss_dssp CCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred EEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc
Confidence 34578999999999999875 8899999997643 233567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
+++|.+.+... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++...... .
T Consensus 96 -~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 166 (275)
T 2eue_A 96 -GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG---N 166 (275)
T ss_dssp -CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred -CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc---c
Confidence 67888877543 4689999999999999999999998 9999999999999999999999999999765322 2
Q ss_pred ccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........... .. .+. ...
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~-~~~----------~~~ 231 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN----IS-NGV----------YTL 231 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HH-HTC----------CCC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HH-hCC----------CCC
Confidence 2234579999999999987765 7899999999999999999999986553322221 11 111 011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+......+.+++.+|++.+|++|||+.|+++
T Consensus 232 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 2223456789999999999999999999975
No 137
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.3e-37 Score=361.04 Aligned_cols=248 Identities=26% Similarity=0.342 Sum_probs=205.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|+.. ++.||+|++..... .....+.+|++++++++||||+++++++.+....++||||+
T Consensus 187 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~ 266 (576)
T 2acx_A 187 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 266 (576)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence 34578999999999999985 88999999976532 33456889999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~---~ 340 (576)
T 2acx_A 267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG---Q 340 (576)
T ss_dssp CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT---C
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC---c
Confidence 999999999766556699999999999999999999998 9999999999999999999999999999876322 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.................. . ...++
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~----------~~~~p 409 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-V----------PEEYS 409 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-C----------CCCCC
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-c----------cccCC
Confidence 233458999999999999989999999999999999999999999875533222222222111 1 11122
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRP-----TMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~ 828 (870)
......+.+++.+|++.||++|| ++.||++
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 33446788999999999999999 7788865
No 138
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.9e-38 Score=343.35 Aligned_cols=255 Identities=23% Similarity=0.364 Sum_probs=193.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCe----EEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN----MGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~----~~L 633 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++..... .++
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~l 93 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEE
Confidence 345689999999999999974 8899999997653 2334678999999999999999999999876543 499
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+++|+|.+++... ..+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 94 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 94 VMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 99999999999998643 4689999999999999999999998 999999999999999999999999999986643
Q ss_pred CCCc-cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccc
Q 002887 714 EGGT-HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792 (870)
Q Consensus 714 ~~~~-~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 792 (870)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..........+ ......... ..
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~----~~~~~~~~~---~~ 241 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ----HVREDPIPP---SA 241 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHHCCCCCH---HH
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HhcCCCCCc---cc
Confidence 2221 222345799999999999999999999999999999999999999986554332222 121111100 00
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH-HHHHHh
Q 002887 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVV-IELNDC 833 (870)
Q Consensus 793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl-~~L~~~ 833 (870)
. .......+.+++.+|++.||++||+..+++ +.+...
T Consensus 242 ~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 242 R----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp H----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0 112345688999999999999999666655 455443
No 139
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=349.68 Aligned_cols=254 Identities=28% Similarity=0.432 Sum_probs=195.4
Q ss_pred hccccccccCcEEEEEEEEC---C--eeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEec-CCeEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD---D--KQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDE-GANMGLIYE 636 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~---~--~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-~~~~~LV~E 636 (870)
.+.+.||+|+||.||+|.+. + ..||||.+.... ....++|.+|+.++++++||||++++++|.+ ....++|||
T Consensus 92 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e 171 (373)
T 3c1x_A 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 171 (373)
T ss_dssp EEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEE
T ss_pred ecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEE
Confidence 34578999999999999863 2 358999987543 3456789999999999999999999999754 457899999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++.. ....+++..++.++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.......
T Consensus 172 ~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 172 YMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 9999999999864 335689999999999999999999998 999999999999999999999999999986533221
Q ss_pred c--cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 717 T--HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 717 ~--~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
. .......+++.|+|||++.+..++.++|||||||++|||++ |.+||........... ...+..
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-----~~~~~~-------- 314 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-----LLQGRR-------- 314 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-----HHTTCC--------
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-----HHcCCC--------
Confidence 1 11233467889999999999999999999999999999999 6778876554332221 111110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...+......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 315 -~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 -LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 01122334578899999999999999999999999998764
No 140
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.6e-37 Score=337.28 Aligned_cols=246 Identities=21% Similarity=0.300 Sum_probs=194.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCC-----------
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----------- 629 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----------- 629 (870)
.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 9 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~ 88 (332)
T 3qd2_B 9 EPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEI 88 (332)
T ss_dssp EEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-
T ss_pred ceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhh
Confidence 45689999999999999985 8899999997543 335577999999999999999999999986543
Q ss_pred ----------------------------------------------eEEEEEEEccCCchhhhhhhccc-ccccHHHHHH
Q 002887 630 ----------------------------------------------NMGLIYEFMANGNLQAHLLEDKA-DTLCWERRLQ 662 (870)
Q Consensus 630 ----------------------------------------------~~~LV~Ey~~~gsL~~~l~~~~~-~~l~~~~~~~ 662 (870)
..++||||+++|+|.+++..... ...++..++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 168 (332)
T 3qd2_B 89 WLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLH 168 (332)
T ss_dssp -------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHH
T ss_pred hhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHH
Confidence 27899999999999999976433 4567778999
Q ss_pred HHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc----------cccccccCCCCccCc
Q 002887 663 IASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT----------HVSTTVVGTPGYLDP 732 (870)
Q Consensus 663 i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~----------~~~~~~~gt~~y~AP 732 (870)
++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus 169 i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 245 (332)
T 3qd2_B 169 IFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP 245 (332)
T ss_dssp HHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred HHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence 999999999999998 9999999999999999999999999999876433211 122345799999999
Q ss_pred cccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHc
Q 002887 733 EYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALAC 812 (870)
Q Consensus 733 E~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~C 812 (870)
|++.+..++.++|||||||++|||++|..|+.. ..... .......... ........+.+++.+|
T Consensus 246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~------~~~~~-~~~~~~~~~~---------~~~~~~~~~~~li~~~ 309 (332)
T 3qd2_B 246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQME------RVRII-TDVRNLKFPL---------LFTQKYPQEHMMVQDM 309 (332)
T ss_dssp HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH------HHHHH-HHHHTTCCCH---------HHHHHCHHHHHHHHHH
T ss_pred HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH------HHHHH-HHhhccCCCc---------ccccCChhHHHHHHHH
Confidence 999999999999999999999999998776421 11111 1111111110 0123345678999999
Q ss_pred cccCCCCCCCHHHHHH
Q 002887 813 IHTISTRRPTMNQVVI 828 (870)
Q Consensus 813 l~~dP~~RPsm~eVl~ 828 (870)
++.+|++|||+.|+++
T Consensus 310 l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 310 LSPSPTERPEATDIIE 325 (332)
T ss_dssp HCSSGGGSCCHHHHHH
T ss_pred ccCCCCcCCCHHHHhh
Confidence 9999999999999986
No 141
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.4e-37 Score=337.27 Aligned_cols=248 Identities=23% Similarity=0.329 Sum_probs=203.8
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh------hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ------GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 633 (870)
.+.+.+.||+|+||.||+|... ++.||+|++...... ..+.+.+|++++++++||||+++++++.+....++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3456789999999999999986 889999999765322 35678999999999999999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----cEEEEeccCCc
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----QAKLADFGLSR 709 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~vkL~DFGla~ 709 (870)
||||+++++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|||++.
T Consensus 93 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 93 ILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999864 35689999999999999999999998 999999999999999888 79999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||............ . .... -.
T Consensus 168 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i----~-~~~~--~~ 237 (321)
T 2a2a_A 168 EIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANI----T-SVSY--DF 237 (321)
T ss_dssp ECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH----H-TTCC--CC
T ss_pred ecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHH----H-hccc--cc
Confidence 76332 1223457999999999999999999999999999999999999999765543332221 1 1100 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
++... ......+.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 238 DEEFF----SHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CHHHH----TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred Chhhh----cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000 122356889999999999999999999986
No 142
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.1e-37 Score=339.10 Aligned_cols=252 Identities=23% Similarity=0.300 Sum_probs=186.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEe--------cCCeE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCD--------EGANM 631 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~--------~~~~~ 631 (870)
+.+.+.||+|+||.||+|+.. ++.||||++........+.+.+|+.++.++. ||||+++++++. .....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 345689999999999999984 8899999997776666778999999999996 999999999993 34458
Q ss_pred EEEEEEccCCchhhhhhhc-ccccccHHHHHHHHHHHHHHHHHHHhCCCCC--ceeCCCCCCCEEEcCCCcEEEEeccCC
Q 002887 632 GLIYEFMANGNLQAHLLED-KADTLCWERRLQIASESAQGLEYLHNGCKPP--IVHRDVKSANILLNEKFQAKLADFGLS 708 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~--IvHrDLKp~NILld~~~~vkL~DFGla 708 (870)
++||||+. |+|.+++... ....+++..++.++.|++.||+|||+. + |+||||||+|||++.++.+||+|||++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 89999996 7898888653 335699999999999999999999998 7 999999999999999999999999999
Q ss_pred ccccCCCCcc----------ccccccCCCCccCcccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002887 709 RIFPVEGGTH----------VSTTVVGTPGYLDPEYY---ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 709 ~~~~~~~~~~----------~~~~~~gt~~y~APE~~---~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~ 775 (870)
+......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--- 262 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV--- 262 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh---
Confidence 8764322111 11244689999999998 5667899999999999999999999999754322111
Q ss_pred HHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 776 VSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
...............+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 263 --------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 263 --------------NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------------cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111111111222347789999999999999999999999998764
No 143
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.7e-37 Score=327.16 Aligned_cols=248 Identities=22% Similarity=0.333 Sum_probs=203.0
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++.++...++||||++
T Consensus 9 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (276)
T 2yex_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (276)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred eEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecC
Confidence 345689999999999999986 8899999997553 3345778999999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 89 ~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 89 GGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp TEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 9999998853 34689999999999999999999998 999999999999999999999999999986643322233
Q ss_pred cccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 720 STTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRT-LIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~-~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.....|++.|+|||.+.+..+ +.++||||||++++||++|+.||....... ....|.. .... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~---------~~~ 230 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----KKTY---------LNP 230 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----TCTT---------STT
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----cccc---------cCc
Confidence 345679999999999987664 789999999999999999999998655432 2222211 1000 001
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.......+.+++.+|++.+|++|||+.|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1233456789999999999999999999875
No 144
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.2e-37 Score=344.57 Aligned_cols=245 Identities=24% Similarity=0.338 Sum_probs=200.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||++... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 18 ~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~ 97 (384)
T 4fr4_A 18 EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLL 97 (384)
T ss_dssp EEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecC
Confidence 45689999999999999986 7889999997643 234567889999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|..++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+... .
T Consensus 98 ~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~---~ 169 (384)
T 4fr4_A 98 LGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---T 169 (384)
T ss_dssp TTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT---C
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC---C
Confidence 99999999864 34699999999999999999999998 9999999999999999999999999999876322 2
Q ss_pred ccccccCCCCccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 719 VSTTVVGTPGYLDPEYYIS---NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~---~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
......||+.|+|||++.. ..++.++|||||||++|||++|+.||........ ......... .. .
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~~~~~~~-~~----------~ 237 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFET-TV----------V 237 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-HHHHHHHHH-CC----------C
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-HHHHHHHhh-cc----------c
Confidence 3345689999999999974 4589999999999999999999999975443221 121111111 10 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPT-MNQVVI 828 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs-m~eVl~ 828 (870)
.++......+.+++.+||+.+|++||+ +.+|.+
T Consensus 238 ~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 122334467889999999999999998 666653
No 145
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.5e-37 Score=340.46 Aligned_cols=242 Identities=27% Similarity=0.382 Sum_probs=197.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
...+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 57 ~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 136 (348)
T 1u5q_A 57 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC 136 (348)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecC
Confidence 34578999999999999974 8899999997542 234567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
. |+|.+.+... ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 137 ~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~----- 206 (348)
T 1u5q_A 137 L-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 206 (348)
T ss_dssp S-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred C-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC-----
Confidence 8 6787777543 35789999999999999999999998 999999999999999999999999999986532
Q ss_pred ccccccCCCCccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 719 VSTTVVGTPGYLDPEYYI---SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~---~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.....||+.|+|||++. .+.++.++|||||||++|||++|+.||........+.. ...... +.+
T Consensus 207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~----~~~~~~------~~~-- 273 (348)
T 1u5q_A 207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNES------PAL-- 273 (348)
T ss_dssp -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSCC------CCC--
T ss_pred -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH----HHhcCC------CCC--
Confidence 23457999999999985 56789999999999999999999999976543332222 111110 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
........+.+++.+||+.+|++|||+.|+++.
T Consensus 274 -~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 274 -QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 111234567899999999999999999999863
No 146
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-37 Score=357.76 Aligned_cols=243 Identities=24% Similarity=0.332 Sum_probs=193.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||||++.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 151 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~ 230 (446)
T 4ejn_A 151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYA 230 (446)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCC
T ss_pred EEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeC
Confidence 34579999999999999975 8899999997642 233456788999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHh-CCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 231 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~ 303 (446)
T 4ejn_A 231 NGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--G 303 (446)
T ss_dssp SSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC--C
Confidence 999999988643 478999999999999999999998 7 9999999999999999999999999999854222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .... ..+
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i----~~~~-----------~~~ 368 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI----LMEE-----------IRF 368 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HHCC-----------CCC
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH----HhCC-----------CCC
Confidence 2334578999999999999999999999999999999999999999765543322221 1111 011
Q ss_pred CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRP-----TMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~ 828 (870)
+......+.+++.+||+.||++|| +++|+++
T Consensus 369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 223345788999999999999999 9999986
No 147
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.5e-37 Score=339.80 Aligned_cols=245 Identities=23% Similarity=0.347 Sum_probs=179.1
Q ss_pred ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
+.||+|+||.||+|... ++.||||++... ....+.+|+.++++++ ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 68999999999999986 789999999754 3456789999999997 99999999999999999999999999999
Q ss_pred hhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC---cEEEEeccCCccccCCCCcccc
Q 002887 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---QAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 644 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~vkL~DFGla~~~~~~~~~~~~ 720 (870)
.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~ 166 (325)
T 3kn6_A 94 FERIKKK--KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPL 166 (325)
T ss_dssp HHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--CCcc
Confidence 9998653 5799999999999999999999998 999999999999998765 8999999999865322 2233
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc---chHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR---TLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~---~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....+.... +..+... .....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-i~~~~~~------~~~~~ 239 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK-IKKGDFS------FEGEA 239 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH-HTTTCCC------CCSHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH-HHcCCCC------CCccc
Confidence 4567899999999999999999999999999999999999999764421 111121111 1122110 00000
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.......+.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0123467889999999999999999999864
No 148
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=337.67 Aligned_cols=259 Identities=27% Similarity=0.428 Sum_probs=207.6
Q ss_pred hccccccccCcEEEEEEEE------CCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC--eEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYL------DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA--NMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~------~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~--~~~LV~ 635 (870)
.+.+.||+|+||.||++++ .++.||||++........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 4568999999999999985 37899999998776666788999999999999999999999987654 689999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
||+++|+|.+++... ...+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 124 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp CCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred ECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 999999999998654 34689999999999999999999998 99999999999999999999999999998764332
Q ss_pred Ccc-ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc-----------chHHHHHHHHhhcC
Q 002887 716 GTH-VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR-----------TLIGQWVSSMLARG 783 (870)
Q Consensus 716 ~~~-~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~-----------~~l~~~~~~~~~~~ 783 (870)
... ......++..|+|||.+.+..++.++||||||++++||++|+.|+...... ..........+.
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 277 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-- 277 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH--
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh--
Confidence 211 123345778899999999988999999999999999999999988642110 000001111111
Q ss_pred CcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 784 DIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 784 ~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
..............+.+++.+|++.+|++|||+.||++.|+++..
T Consensus 278 -------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 278 -------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp -------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111112233445678899999999999999999999999998754
No 149
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.9e-37 Score=339.22 Aligned_cols=254 Identities=30% Similarity=0.460 Sum_probs=203.6
Q ss_pred hhccccccccCcEEEEEEEEC--Cee--EEEEEeecc-chhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQ--VAVKMLSSS-SVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~--vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
+.+.+.||+|+||.||+|+.. +.. +|+|.+... .....+.+.+|+++++++ +||||+++++++.+....++|||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 106 (327)
T 1fvr_A 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 106 (327)
T ss_dssp CEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred ccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEe
Confidence 345689999999999999875 554 499998754 233456789999999999 99999999999999999999999
Q ss_pred EccCCchhhhhhhcc--------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEE
Q 002887 637 FMANGNLQAHLLEDK--------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKL 702 (870)
Q Consensus 637 y~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL 702 (870)
|+++|+|.+++.... ...+++..++.++.|+++||+|||+. +|+||||||+|||++.++.+||
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kL 183 (327)
T 1fvr_A 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 183 (327)
T ss_dssp CCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEE
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEEE
Confidence 999999999987543 24689999999999999999999998 9999999999999999999999
Q ss_pred EeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhh
Q 002887 703 ADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLA 781 (870)
Q Consensus 703 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~ 781 (870)
+|||+++.... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||......... .. +.
T Consensus 184 ~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~----~~-~~ 255 (327)
T 1fvr_A 184 ADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY----EK-LP 255 (327)
T ss_dssp CCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----HH-GG
T ss_pred cccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH----HH-hh
Confidence 99999874321 112233457889999999998889999999999999999998 99999765433221 11 11
Q ss_pred cCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 782 RGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 782 ~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.+. ...........+.+++.+|++.+|++|||+.|+++.|++++..
T Consensus 256 ~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 256 QGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp GTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cCC---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111 1112223446788999999999999999999999999997754
No 150
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.5e-36 Score=338.96 Aligned_cols=255 Identities=22% Similarity=0.258 Sum_probs=201.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-----cccceeEEEEEecCCeEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-----HKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-----H~nIv~l~g~~~~~~~~~LV~ 635 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ...+.+..|++++++++ ||||+++++++......++||
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~ 115 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIF 115 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEE
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEE
Confidence 344689999999999999984 8899999997542 34456788999999996 999999999999999999999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-------------------
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE------------------- 696 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~------------------- 696 (870)
||+ +++|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 116 e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 116 EPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp CCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred cCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 999 89999999876666799999999999999999999998 9999999999999975
Q ss_pred ------CCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccc
Q 002887 697 ------KFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRT 770 (870)
Q Consensus 697 ------~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~ 770 (870)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 266 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME 266 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHH
Confidence 789999999999864321 234678999999999999999999999999999999999999998765443
Q ss_pred hHHHHHHHHhhcCC-----------cchhccc-----ccCCCCC-H---------------HHHHHHHHHHHHccccCCC
Q 002887 771 LIGQWVSSMLARGD-----------IKNIVDH-----RLQGDFD-T---------------NTVWKAVEIALACIHTIST 818 (870)
Q Consensus 771 ~l~~~~~~~~~~~~-----------~~~i~d~-----~l~~~~~-~---------------~~~~~l~~l~~~Cl~~dP~ 818 (870)
.+..... ....-. ....++. .+..... . .....+.+++.+||+.||+
T Consensus 267 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~ 345 (360)
T 3llt_A 267 HLAMMES-IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPT 345 (360)
T ss_dssp HHHHHHH-HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHH-hcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChh
Confidence 3322211 110000 0000000 0000000 0 0115677999999999999
Q ss_pred CCCCHHHHHH
Q 002887 819 RRPTMNQVVI 828 (870)
Q Consensus 819 ~RPsm~eVl~ 828 (870)
+|||+.|+++
T Consensus 346 ~Rpta~elL~ 355 (360)
T 3llt_A 346 LRPSPAELLK 355 (360)
T ss_dssp GSCCHHHHTT
T ss_pred hCCCHHHHhc
Confidence 9999999975
No 151
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=333.99 Aligned_cols=258 Identities=22% Similarity=0.302 Sum_probs=196.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++......++||||++
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (311)
T 4agu_A 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD 85 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCC
Confidence 34578999999999999986 88999999866532 235678899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 86 ~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 158 (311)
T 4agu_A 86 HTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDY 158 (311)
T ss_dssp EEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc--ccc
Confidence 9999887753 35689999999999999999999998 9999999999999999999999999999875322 222
Q ss_pred cccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHh----------hcCC-cc-
Q 002887 720 STTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSML----------ARGD-IK- 786 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~----------~~~~-~~- 786 (870)
.....||+.|+|||++.+ ..++.++||||||++++||++|+.||................- .... ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 345578999999999976 5689999999999999999999999987664443332221110 0000 00
Q ss_pred -hhcccccCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 787 -NIVDHRLQGDF---DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 787 -~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.+.++.-.... .......+.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000 0123456889999999999999999999985
No 152
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=349.45 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=199.9
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.||+|+||.||+++.. ++.||+|++..... ...+.+.+|..++.+++||||+++++++.+....++||||++
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 3478999999999999985 88999999976432 234568899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+|+|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++++||+|||+++..... ....
T Consensus 145 gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~-~~~~ 219 (412)
T 2vd5_A 145 GGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD-GTVR 219 (412)
T ss_dssp SCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-SCEE
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCC-Cccc
Confidence 99999999653 34789999999999999999999998 9999999999999999999999999999876432 2222
Q ss_pred cccccCCCCccCccccc-------cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccc
Q 002887 720 STTVVGTPGYLDPEYYI-------SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~-------~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 792 (870)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||..........++...... +.-+
T Consensus 220 ~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~------~~~p- 292 (412)
T 2vd5_A 220 SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEH------LSLP- 292 (412)
T ss_dssp CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH------CCCC-
T ss_pred cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC------cCCC-
Confidence 34568999999999997 356899999999999999999999999876544333332211100 0001
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 002887 793 LQGDFDTNTVWKAVEIALACIHTISTRR---PTMNQVVI 828 (870)
Q Consensus 793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Psm~eVl~ 828 (870)
.........+.+++.+|++ +|++| |+++|+++
T Consensus 293 ---~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 293 ---LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ---ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0112234578899999999 99998 58888864
No 153
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-37 Score=348.44 Aligned_cols=259 Identities=23% Similarity=0.393 Sum_probs=190.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhc-cccceeEEEEEecCC--eEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGA--NMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~--~~~LV~ 635 (870)
+.+.+.||+|+||.||+|... ++.||||++... .....+.+.+|+.++.++. ||||+++++++...+ ..++||
T Consensus 11 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~ 90 (388)
T 3oz6_A 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVF 90 (388)
T ss_dssp EEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEe
Confidence 345689999999999999875 889999998653 3344567889999999997 999999999997543 689999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
|||+ |+|..++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 91 e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 91 DYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp ECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred cccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 9998 588888853 4689999999999999999999998 99999999999999999999999999998653211
Q ss_pred -------------------CccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002887 716 -------------------GTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 716 -------------------~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~ 775 (870)
.........||+.|+|||++.+ ..++.++|||||||+++||++|++||.+......+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 1112344579999999999986 67899999999999999999999999877654444443
Q ss_pred HHHHhhcCCcchh-----------c----------ccccCCCC------------CHHHHHHHHHHHHHccccCCCCCCC
Q 002887 776 VSSMLARGDIKNI-----------V----------DHRLQGDF------------DTNTVWKAVEIALACIHTISTRRPT 822 (870)
Q Consensus 776 ~~~~~~~~~~~~i-----------~----------d~~l~~~~------------~~~~~~~l~~l~~~Cl~~dP~~RPs 822 (870)
.. .+.......+ + .......+ .......+.+++.+||+.||++|||
T Consensus 244 ~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 244 IG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 32 1111000000 0 00000000 0022456889999999999999999
Q ss_pred HHHHHHH
Q 002887 823 MNQVVIE 829 (870)
Q Consensus 823 m~eVl~~ 829 (870)
+.|+++.
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999864
No 154
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.8e-37 Score=329.15 Aligned_cols=242 Identities=28% Similarity=0.403 Sum_probs=198.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||+|++..... .....+.+|++++++++||||+++++++.+....++||||+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYA 91 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecC
Confidence 34578999999999999986 67899999876432 23467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..... .
T Consensus 92 ~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~----~ 162 (279)
T 3fdn_A 92 PLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----S 162 (279)
T ss_dssp TTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc----c
Confidence 999999988643 4689999999999999999999998 999999999999999999999999999865422 1
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||.+.+..++.++||||||++++||++|+.||............ . .. ....+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~-~~----------~~~~~ 227 (279)
T 3fdn_A 163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----S-RV----------EFTFP 227 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----H-HT----------CCCCC
T ss_pred cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH----H-hC----------CCCCC
Confidence 223457899999999999999999999999999999999999999865533322211 1 11 01122
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
......+.+++.+|++.+|++|||+.|+++.
T Consensus 228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 228 DFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 2334567899999999999999999999874
No 155
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-36 Score=331.95 Aligned_cols=247 Identities=24% Similarity=0.389 Sum_probs=201.4
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.+.||+|+||.||+++.. ++.||+|++........+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 3456689999999999999985 88999999987655555678999999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~~~ 716 (870)
+++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||++.....
T Consensus 90 ~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~--- 161 (304)
T 2jam_A 90 GGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN--- 161 (304)
T ss_dssp SCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC---
T ss_pred CccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC---
Confidence 99999988643 4689999999999999999999998 99999999999999 7889999999999875421
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
.......|++.|+|||++.+..++.++||||||+++|||++|+.||...........+ ..+... ....
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i-----~~~~~~------~~~~ 229 (304)
T 2jam_A 162 -GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI-----KEGYYE------FESP 229 (304)
T ss_dssp -BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----HHCCCC------CCTT
T ss_pred -CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-----HcCCCC------CCcc
Confidence 1223456999999999999999999999999999999999999999865543322221 111110 0111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
........+.+++.+|++.+|++|||+.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 FWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12234467889999999999999999999986
No 156
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-37 Score=343.11 Aligned_cols=251 Identities=23% Similarity=0.317 Sum_probs=203.5
Q ss_pred hhccccccccCcEEEEEEEE-----CCeeEEEEEeeccc----hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL-----DDKQVAVKMLSSSS----VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~ 632 (870)
+.+.+.||+|+||.||+++. .++.||||+++... ....+.+.+|++++.++ +|+||+++++++......+
T Consensus 56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 135 (355)
T 1vzo_A 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH 135 (355)
T ss_dssp EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence 34568999999999999997 47899999987542 23446678899999999 6999999999999999999
Q ss_pred EEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcccc
Q 002887 633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP 712 (870)
Q Consensus 633 LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~ 712 (870)
+||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 136 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~ 210 (355)
T 1vzo_A 136 LILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV 210 (355)
T ss_dssp EEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred EEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence 999999999999998643 4689999999999999999999998 99999999999999999999999999998653
Q ss_pred CCCCccccccccCCCCccCccccccC--CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 713 VEGGTHVSTTVVGTPGYLDPEYYISN--RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 713 ~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
.. .........||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+........
T Consensus 211 ~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------- 282 (355)
T 1vzo_A 211 AD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE------- 282 (355)
T ss_dssp GG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-------
T ss_pred cC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC-------
Confidence 22 22223456799999999999863 478999999999999999999999986554444444333332211
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRP-----TMNQVVIEL 830 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~~L 830 (870)
...+......+.+++.+||+.||++|| ++.|+++..
T Consensus 283 ----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 112233445678999999999999999 899988643
No 157
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=336.42 Aligned_cols=255 Identities=23% Similarity=0.259 Sum_probs=201.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEe----cCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD----EGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~----~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+++.. ++.||||++........+.+.+|++++++++||||+++++++. .....++||||
T Consensus 32 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 111 (317)
T 2buj_A 32 LFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111 (317)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEe
Confidence 45679999999999999974 8899999998776667788999999999999999999999986 34578899999
Q ss_pred ccCCchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 638 MANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 638 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
+++|+|.+++... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 112 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 188 (317)
T 2buj_A 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHV 188 (317)
T ss_dssp CTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEE
T ss_pred CCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccccc
Confidence 9999999988753 345799999999999999999999998 99999999999999999999999999987542111
Q ss_pred Ccc-------ccccccCCCCccCccccccCC---CCccchHHHHHHHHHHHHhCCCCCCCCCcc-chHHHHHHHHhhcCC
Q 002887 716 GTH-------VSTTVVGTPGYLDPEYYISNR---LTEKSDVYSFGVVLLELITGQPVIQKTPQR-TLIGQWVSSMLARGD 784 (870)
Q Consensus 716 ~~~-------~~~~~~gt~~y~APE~~~~~~---~~~ksDVwS~GvvL~elltG~~p~~~~~~~-~~l~~~~~~~~~~~~ 784 (870)
... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ...... ...
T Consensus 189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~-- 262 (317)
T 2buj_A 189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA----VQN-- 262 (317)
T ss_dssp ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH----HHC--
T ss_pred ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH----hhc--
Confidence 000 112345799999999987554 689999999999999999999998632111 111111 100
Q ss_pred cchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL 834 (870)
Q Consensus 785 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~ 834 (870)
.............+.+++.+|++.+|++||++.|+++.|+.+.
T Consensus 263 -------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 263 -------QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp -------C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred -------cCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 1111112233457889999999999999999999999998753
No 158
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-36 Score=327.37 Aligned_cols=256 Identities=19% Similarity=0.259 Sum_probs=203.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEE-ecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC-DEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... .+++.+|++++++++|++++..+..+ ......++||||+ +
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~ 88 (296)
T 3uzp_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-G 88 (296)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-C
Confidence 34579999999999999964 89999999876532 35689999999999998877666665 5667789999999 8
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCCCCc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~~~~ 717 (870)
++|.+++... ...+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+|||+++........
T Consensus 89 ~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 89 PSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 9999998643 35699999999999999999999998 99999999999999 58889999999999876433221
Q ss_pred c-----ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCc---cchHHHHHHHHhhcCCcchhc
Q 002887 718 H-----VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQ---RTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 718 ~-----~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~---~~~l~~~~~~~~~~~~~~~i~ 789 (870)
. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ............... .
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~---- 239 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I---- 239 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H----
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-h----
Confidence 1 12456799999999999999999999999999999999999999986432 222222222111110 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
+.+. ...+..+.+++.+|++.+|++|||+.||++.|+++...
T Consensus 240 -~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 -EVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp -HHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred -HHHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 0011 12235688999999999999999999999999987643
No 159
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=341.40 Aligned_cols=248 Identities=15% Similarity=0.152 Sum_probs=202.8
Q ss_pred hccccccccCcEEEEEEE-----E--CCeeEEEEEeeccchhhhHHHHHHHHHHHHhc---cccceeEEEEEecCCeEEE
Q 002887 564 NFERVLGKGGFGTVYHGY-----L--DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH---HKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~-----~--~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~---H~nIv~l~g~~~~~~~~~L 633 (870)
.+.+.||+|+||.||+|. . .++.||||++.... ..++..|++++.+++ |+||+++++++...+..++
T Consensus 68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l 144 (365)
T 3e7e_A 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL 144 (365)
T ss_dssp EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence 345789999999999994 2 37899999997653 346778888888876 9999999999999999999
Q ss_pred EEEEccCCchhhhhhhc---ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-----------CCc
Q 002887 634 IYEFMANGNLQAHLLED---KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-----------KFQ 699 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-----------~~~ 699 (870)
||||+++|+|.+++... ....+++..++.|+.|+++||+|||+. +|+||||||+|||++. ++.
T Consensus 145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~ 221 (365)
T 3e7e_A 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAG 221 (365)
T ss_dssp EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTT
T ss_pred EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCC
Confidence 99999999999999753 235799999999999999999999998 9999999999999998 899
Q ss_pred EEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHH
Q 002887 700 AKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM 779 (870)
Q Consensus 700 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~ 779 (870)
+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------- 293 (365)
T 3e7e_A 222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC-------- 293 (365)
T ss_dssp EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE--------
T ss_pred EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce--------
Confidence 999999999765433334445567899999999999999999999999999999999999999864322110
Q ss_pred hhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHHhhhH
Q 002887 780 LARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRR-PTMNQVVIELNDCLAM 836 (870)
Q Consensus 780 ~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Psm~eVl~~L~~~~~~ 836 (870)
.+...+... .....+.+++..|++.+|.+| |++.++.+.|++.+..
T Consensus 294 --------~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 294 --------KPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --------EECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------eechhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 011111111 123456688899999999998 6889999999987754
No 160
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.8e-36 Score=350.38 Aligned_cols=254 Identities=22% Similarity=0.279 Sum_probs=193.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecC------CeEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG------ANMGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~L 633 (870)
.+.+.||+|+||.||+|+.. ++.||||++... .....+++.+|+.+++.++||||+++++++... ...++
T Consensus 65 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 144 (464)
T 3ttj_A 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL 144 (464)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEE
T ss_pred EEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEE
Confidence 34578999999999999875 889999999764 334456789999999999999999999999654 45799
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||++++ |.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 145 v~E~~~~~-l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 145 VMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp EEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred EEeCCCCC-HHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 99999875 555553 2488999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc-----CC----
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR-----GD---- 784 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~-----~~---- 784 (870)
........||+.|+|||++.+..++.++||||+||+++||++|+.||.+......+...+...-.. ..
T Consensus 217 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~ 293 (464)
T 3ttj_A 217 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 293 (464)
T ss_dssp ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHH
T ss_pred ---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchh
Confidence 223345689999999999999999999999999999999999999998766544433332211100 00
Q ss_pred ---------------cchhcccccCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 ---------------IKNIVDHRLQGDFD---TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 ---------------~~~i~d~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....+...+..... ......+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00011111110001 122567899999999999999999999976
No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1e-36 Score=328.14 Aligned_cols=248 Identities=24% Similarity=0.354 Sum_probs=200.6
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh------hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ------GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~L 633 (870)
.+.+.+.||+|+||.||++... ++.||+|++...... ..+.+.+|++++++++||||+++++++......++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 3456789999999999999986 889999998765321 35678999999999999999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----cEEEEeccCCc
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----QAKLADFGLSR 709 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~vkL~DFGla~ 709 (870)
||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+|||++.
T Consensus 86 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 86 ILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 99999999999998643 4689999999999999999999998 999999999999999877 89999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
..... .......|++.|+|||++.+..++.++||||||++++||++|+.||...........+ . ..... .
T Consensus 161 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~-~~~~~--~ 230 (283)
T 3bhy_A 161 KIEAG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNI----S-AVNYD--F 230 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----H-TTCCC--C
T ss_pred eccCC---CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHh----H-hcccC--C
Confidence 65322 1223456899999999999999999999999999999999999999865543322221 1 11000 0
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+... .......+.+++.+|++.+|++||++.|+++
T Consensus 231 ~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 231 DEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0000 0122356889999999999999999999987
No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.7e-37 Score=329.46 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=196.3
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.+.||+|+||.||++... ++.+|+|++..... ...+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 103 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence 455689999999999999985 78999999976543 345788999999999999999999999999999999999999
Q ss_pred CCchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCC
Q 002887 640 NGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 640 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~ 714 (870)
+|+|.+.+... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++......
T Consensus 104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~ 180 (285)
T 3is5_A 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180 (285)
T ss_dssp CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----
T ss_pred CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCc
Confidence 99999988654 236799999999999999999999998 99999999999999 45678999999999865322
Q ss_pred CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.......|++.|+|||.+. +.++.++||||||++++||++|+.||........... ...... ...
T Consensus 181 ---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~----~~~~~~-------~~~ 245 (285)
T 3is5_A 181 ---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK----ATYKEP-------NYA 245 (285)
T ss_dssp ---------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCC-------CCC
T ss_pred ---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh----hccCCc-------ccc
Confidence 2234567999999999875 5689999999999999999999999986553322111 111110 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. .......+.+++.+|++.||++|||+.|+++
T Consensus 246 ~~-~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VE-CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc-cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 0112356789999999999999999999975
No 163
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.2e-36 Score=331.07 Aligned_cols=251 Identities=24% Similarity=0.348 Sum_probs=194.3
Q ss_pred ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
+.||+|+||.||+|... ++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 67999999999999874 889999999877655667899999999995 799999999999999999999999999999
Q ss_pred hhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc---EEEEeccCCccccCCCCc---
Q 002887 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSRIFPVEGGT--- 717 (870)
Q Consensus 644 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---vkL~DFGla~~~~~~~~~--- 717 (870)
.+++... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+|||++.........
T Consensus 99 ~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 173 (316)
T 2ac3_A 99 LSHIHKR--RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173 (316)
T ss_dssp HHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----------
T ss_pred HHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc
Confidence 9998653 4689999999999999999999999 9999999999999998776 999999999765322111
Q ss_pred --cccccccCCCCccCcccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCCCCccch----------HHHHHHHHh
Q 002887 718 --HVSTTVVGTPGYLDPEYYIS-----NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTL----------IGQWVSSML 780 (870)
Q Consensus 718 --~~~~~~~gt~~y~APE~~~~-----~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~----------l~~~~~~~~ 780 (870)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ........+
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i 253 (316)
T 2ac3_A 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253 (316)
T ss_dssp --------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHH
T ss_pred cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHH
Confidence 11223469999999999975 4588999999999999999999999976542210 000011111
Q ss_pred hcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 781 ARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 781 ~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..+... ...... ......+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~-~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 254 QEGKYE-FPDKDW-----AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHCCCC-CCHHHH-----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hccCcc-cCchhc-----ccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 111110 000000 112457889999999999999999999976
No 164
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-37 Score=347.46 Aligned_cols=248 Identities=27% Similarity=0.372 Sum_probs=195.0
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHH-HHHhccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVEL-LIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
+.+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|..+ ++.++||||+++++++.+....++|||
T Consensus 40 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E 119 (373)
T 2r5t_A 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119 (373)
T ss_dssp EEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEe
Confidence 345689999999999999986 77899999976542 233455667666 467899999999999999999999999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++.+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-- 192 (373)
T 2r5t_A 120 YINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-- 192 (373)
T ss_dssp CCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC--
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC--
Confidence 99999999998643 4688999999999999999999998 9999999999999999999999999999864222
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
........||+.|+|||++.+..++.++|+|||||++|||++|+.||...........+ ... . + .
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i----~~~-~--------~--~ 257 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI----LNK-P--------L--Q 257 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH----HHS-C--------C--C
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH----Hhc-c--------c--C
Confidence 22334568999999999999999999999999999999999999999865543322222 211 1 1 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELND 832 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~ 832 (870)
+.......+.+++.+|++.||++||++.+.++++.+
T Consensus 258 ~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~ 293 (373)
T 2r5t_A 258 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293 (373)
T ss_dssp CCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHT
T ss_pred CCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhC
Confidence 122234568899999999999999998765555544
No 165
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.9e-37 Score=331.68 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=201.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEe--cCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCD--EGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||++... ++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++||||
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 88 (279)
T 2w5a_A 9 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY 88 (279)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEEC
T ss_pred eeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeC
Confidence 34578999999999999985 7899999997643 334567899999999999999999999874 46688999999
Q ss_pred ccCCchhhhhhhcc--cccccHHHHHHHHHHHHHHHHHHHhCCCCC-----ceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 638 MANGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLHNGCKPP-----IVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 638 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~-----IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
+++|+|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||++++++.+||+|||+++.
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~ 165 (279)
T 2w5a_A 89 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 165 (279)
T ss_dssp CTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred CCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence 99999999987543 24599999999999999999999998 6 99999999999999999999999999986
Q ss_pred ccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
.... ........|++.|+|||.+.+..++.++||||||+++|||++|+.||.......... .+..+...
T Consensus 166 ~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~i~~~~~~---- 234 (279)
T 2w5a_A 166 LNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-----KIREGKFR---- 234 (279)
T ss_dssp C-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-----HHHHTCCC----
T ss_pred eccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH-----HHhhcccc----
Confidence 5322 222334578999999999999899999999999999999999999998655332221 12222211
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN 831 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~ 831 (870)
..+......+.+++.+|++.+|++||++.||++.+.
T Consensus 235 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 -----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 112233457889999999999999999999998654
No 166
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7e-37 Score=353.94 Aligned_cols=242 Identities=24% Similarity=0.365 Sum_probs=202.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|+++++.++||||+++++++......++||||+
T Consensus 19 ~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~ 98 (476)
T 2y94_A 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98 (476)
T ss_dssp EEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45678999999999999986 88999999976532 23467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++.+ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 99 ~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~---~ 170 (476)
T 2y94_A 99 SGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---E 170 (476)
T ss_dssp SSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT---C
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc---c
Confidence 99999999864 34699999999999999999999998 9999999999999999999999999999876322 2
Q ss_pred ccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........... .. .+.. ..
T Consensus 171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~----i~-~~~~----------~~ 235 (476)
T 2y94_A 171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK----IC-DGIF----------YT 235 (476)
T ss_dssp CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH----HH-TTCC----------CC
T ss_pred cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH----Hh-cCCc----------CC
Confidence 2345679999999999988765 6899999999999999999999986554332222 11 1111 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+......+.+++.+|++.||++|||+.|+++
T Consensus 236 p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 236 PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1123356789999999999999999999986
No 167
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=331.70 Aligned_cols=247 Identities=23% Similarity=0.313 Sum_probs=198.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc----hhhhHHHHHHHHHHHHhccccceeEEEEE--ecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS----VQGYKQFQAEVELLIRAHHKNLTILVGYC--DEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~--~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||++... ++.||+|++.... ....+.+.+|++++++++|+||+++++++ .+....++||
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM 87 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEE
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEe
Confidence 45689999999999999985 7899999997653 23456789999999999999999999998 4456789999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
||++++ |.+.+.......+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 88 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 88 EYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp ECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred hhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 999987 77777665567899999999999999999999998 99999999999999999999999999998764333
Q ss_pred CccccccccCCCCccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNR--LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~--~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
.........|++.|+|||++.+.. .+.++||||||+++|||++|+.||........... +..+..
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----i~~~~~-------- 230 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFEN-----IGKGSY-------- 230 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----HHHCCC--------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH-----HhcCCC--------
Confidence 333334567999999999997654 47899999999999999999999986543222211 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
.........+.+++.+|++.||++|||+.|+++.
T Consensus 231 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 231 --AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1122334567899999999999999999999864
No 168
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-36 Score=355.95 Aligned_cols=244 Identities=22% Similarity=0.381 Sum_probs=202.3
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.||+|+||.||+++.. ++.||+|++..... ...+.+.+|++++++++||||+++++++......++||||++
T Consensus 189 ~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~ 268 (543)
T 3c4z_A 189 DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN 268 (543)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence 3478999999999999985 88999999976532 334678899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcc--cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 640 NGNLQAHLLEDK--ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 640 ~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.+....
T Consensus 269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~-- 343 (543)
T 3c4z_A 269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ-- 343 (543)
T ss_dssp TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--
T ss_pred CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCC--
Confidence 999999987543 35699999999999999999999998 99999999999999999999999999998763321
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..........++........ ..+
T Consensus 344 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~-----------~~~ 412 (543)
T 3c4z_A 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA-----------VTY 412 (543)
T ss_dssp CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC-----------CCC
T ss_pred cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc-----------cCC
Confidence 223445899999999999999999999999999999999999999987644333333333322211 112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMN 824 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~ 824 (870)
+......+.+++.+|++.+|++||++.
T Consensus 413 p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 413 PDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred CcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 233456788999999999999999763
No 169
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.3e-36 Score=324.94 Aligned_cols=257 Identities=18% Similarity=0.250 Sum_probs=202.8
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEE-ecCCeEEEEEEEcc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYC-DEGANMGLIYEFMA 639 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~-~~~~~~~LV~Ey~~ 639 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... .+++.+|++++++++|++++..+..+ ......++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-
Confidence 345689999999999999964 88999998765432 35688999999999988877776666 6677889999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~~~ 716 (870)
+++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.......
T Consensus 88 ~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 88 GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 99999988643 34699999999999999999999999 99999999999999 7899999999999987643322
Q ss_pred c-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc---chHHHHHHHHhhcCCcchh
Q 002887 717 T-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR---TLIGQWVSSMLARGDIKNI 788 (870)
Q Consensus 717 ~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~---~~l~~~~~~~~~~~~~~~i 788 (870)
. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ............. ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~--- 239 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PI--- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CH---
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hh---
Confidence 1 1223567999999999999999999999999999999999999999865432 2222221111110 00
Q ss_pred cccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 789 VDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 789 ~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
+.+. ...+..+.+++.+|++.+|++|||+.||++.|+++...
T Consensus 240 --~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 240 --EVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp --HHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred --hhhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 0000 11235788999999999999999999999999997643
No 170
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=329.82 Aligned_cols=244 Identities=24% Similarity=0.408 Sum_probs=180.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 14 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (278)
T 3cok_A 14 KVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMC 93 (278)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecC
Confidence 34578999999999999974 88999999976432 22467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 94 ~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~--~ 167 (278)
T 3cok_A 94 HNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH--E 167 (278)
T ss_dssp TTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred CCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC--C
Confidence 999999988643 35789999999999999999999998 99999999999999999999999999998653221 1
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||.+.+..++.++||||||++++||++|+.||........... +..... ..+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-------------~~~~~~--~~~ 232 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK-------------VVLADY--EMP 232 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCC--CCC
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH-------------Hhhccc--CCc
Confidence 22345789999999999988899999999999999999999999976543322111 000000 112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+|++.+|++|||+.|+++
T Consensus 233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 233457889999999999999999999976
No 171
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-36 Score=329.82 Aligned_cols=244 Identities=22% Similarity=0.371 Sum_probs=202.7
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||++... ++.+|+|++.... ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 97 (294)
T 2rku_A 18 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 97 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecC
Confidence 34578999999999999986 7889999987652 234567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....... .
T Consensus 98 ~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~ 170 (294)
T 2rku_A 98 RRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--E 170 (294)
T ss_dssp TTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc--c
Confidence 999999987543 4689999999999999999999998 99999999999999999999999999998753222 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||++.+..++.++||||||++++||++|+.||........... .. .+.. ..+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~-~~~~----------~~~ 235 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR----IK-KNEY----------SIP 235 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH-TTCC----------CCC
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----Hh-hccC----------CCc
Confidence 23446799999999999988899999999999999999999999986553322211 11 1110 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
......+.+++.+|++.+|++|||+.|+++.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 KHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 2233567899999999999999999999863
No 172
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.1e-37 Score=334.15 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=197.4
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||+|++..... ...+.+.+|++++++++||||+++++++......++||||+
T Consensus 37 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 116 (309)
T 2h34_A 37 RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLI 116 (309)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEec
Confidence 45689999999999999975 88999999976532 23467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ...
T Consensus 117 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-~~~ 190 (309)
T 2h34_A 117 NGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE-KLT 190 (309)
T ss_dssp CCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc-ccc
Confidence 999999998643 4689999999999999999999998 9999999999999999999999999999765322 112
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ............ + ....
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~----~---~~~~ 258 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-----VMGAHINQAIPR----P---STVR 258 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-----HHHHHHHSCCCC----G---GGTS
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-----HHHHHhccCCCC----c---cccC
Confidence 233457899999999999999999999999999999999999999764432 111122111100 0 0111
Q ss_pred HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhhH
Q 002887 799 TNTVWKAVEIALACIHTISTRRP-TMNQVVIELNDCLAM 836 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RP-sm~eVl~~L~~~~~~ 836 (870)
...+..+.+++.+|++.+|++|| +++++++.|++.+..
T Consensus 259 ~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 259 PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 22344688999999999999999 999999999986543
No 173
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=327.19 Aligned_cols=245 Identities=24% Similarity=0.374 Sum_probs=197.1
Q ss_pred ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCchh
Q 002887 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGNLQ 644 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~ 644 (870)
..||+|+||.||+|... ++.||||++........+.+.+|+.++++++||||+++++++......++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 48999999999999985 7889999998776666778999999999999999999999999999999999999999999
Q ss_pred hhhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-CCcEEEEeccCCccccCCCCcccccc
Q 002887 645 AHLLEDK-ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-KFQAKLADFGLSRIFPVEGGTHVSTT 722 (870)
Q Consensus 645 ~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~vkL~DFGla~~~~~~~~~~~~~~ 722 (870)
+++.... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||++...... ......
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~--~~~~~~ 182 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI--NPCTET 182 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC--CCcccc
Confidence 9987643 23567899999999999999999998 9999999999999998 899999999999865322 122345
Q ss_pred ccCCCCccCccccccCC--CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 723 VVGTPGYLDPEYYISNR--LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 723 ~~gt~~y~APE~~~~~~--~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
..|++.|+|||++.+.. ++.++||||||+++|||++|+.||.......... ...... ......+..
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~----------~~~~~~~~~ 250 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FKVGMF----------KVHPEIPES 250 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HHHHHH----------CCCCCCCTT
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hhhccc----------ccccccccc
Confidence 57899999999997653 8899999999999999999999997543221111 111000 011122233
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....+.+++.+|++.+|++||++.|+++
T Consensus 251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 251 MSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp SCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 4457889999999999999999999975
No 174
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-36 Score=327.08 Aligned_cols=243 Identities=26% Similarity=0.419 Sum_probs=195.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec----CCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE----GANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|... +..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 34578999999999999986 6789999987653 3445678999999999999999999998865 45689999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCC--ceeCCCCCCCEEEc-CCCcEEEEeccCCcccc
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPP--IVHRDVKSANILLN-EKFQAKLADFGLSRIFP 712 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~--IvHrDLKp~NILld-~~~~vkL~DFGla~~~~ 712 (870)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||++ +++.+||+|||++....
T Consensus 109 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 109 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 999999999999643 5689999999999999999999998 6 99999999999998 78999999999997542
Q ss_pred CCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccc
Q 002887 713 VEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792 (870)
Q Consensus 713 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 792 (870)
. .......|++.|+|||++. +.++.++||||||+++++|++|+.||........... ... .+......
T Consensus 184 ~----~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~---~~~-~~~~~~~~--- 251 (290)
T 1t4h_A 184 A----SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---RVT-SGVKPASF--- 251 (290)
T ss_dssp T----TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---HHT-TTCCCGGG---
T ss_pred c----cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHH---HHh-ccCCcccc---
Confidence 2 2233457999999999886 4589999999999999999999999976544322221 111 11111111
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+......+.+++.+|++.+|++|||+.|+++
T Consensus 252 -----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 -----DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1122346889999999999999999999985
No 175
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.1e-36 Score=344.06 Aligned_cols=248 Identities=23% Similarity=0.379 Sum_probs=190.6
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--------hhhHHHHHHHHHHHHhccccceeEEEEEecCCeE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANM 631 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~ 631 (870)
.+.+.+.||+|+||.||+|... ++.||||++..... .....+.+|++++++++||||+++++++.. ...
T Consensus 136 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 214 (419)
T 3i6u_A 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDY 214 (419)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEE
T ss_pred cEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cce
Confidence 3456689999999999999986 78999999976421 223458899999999999999999999864 568
Q ss_pred EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC---cEEEEeccCC
Q 002887 632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---QAKLADFGLS 708 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~vkL~DFGla 708 (870)
++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||++
T Consensus 215 ~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 215 YIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred EEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecccc
Confidence 999999999999998864 35699999999999999999999998 999999999999997544 5999999999
Q ss_pred ccccCCCCccccccccCCCCccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 709 RIFPVEGGTHVSTTVVGTPGYLDPEYYIS---NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 709 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|++||........+.+.+ ..+..
T Consensus 290 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i----~~~~~ 362 (419)
T 3i6u_A 290 KILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----TSGKY 362 (419)
T ss_dssp TSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH----HTTCC
T ss_pred eecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH----hcCCC
Confidence 87532 223345679999999999863 568889999999999999999999998655443333221 11111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. . +.. .......+.+++.+|++.+|++|||+.|+++
T Consensus 363 ~~-~-~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 NF-I-PEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CC-C-HHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC-C-chh----hcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00 0 000 0123457889999999999999999999986
No 176
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2e-36 Score=329.56 Aligned_cols=243 Identities=27% Similarity=0.422 Sum_probs=202.6
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
..+.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++......++||||++++
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 105 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 105 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence 4578999999999999875 8899999997654 334578899999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... .....
T Consensus 106 ~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 177 (303)
T 3a7i_A 106 SALDLLEP---GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT--QIKRN 177 (303)
T ss_dssp EHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT--BCCBC
T ss_pred cHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc--ccccC
Confidence 99998853 5689999999999999999999998 9999999999999999999999999999865332 12234
Q ss_pred cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887 722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT 801 (870)
Q Consensus 722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~ 801 (870)
...|++.|+|||++.+..++.++||||||++++||++|+.||........... ...+.. + ......
T Consensus 178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~-----~----~~~~~~ 243 (303)
T 3a7i_A 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----IPKNNP-----P----TLEGNY 243 (303)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHSCC-----C----CCCSSC
T ss_pred ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-----hhcCCC-----C----CCcccc
Confidence 56789999999999999999999999999999999999999976543322211 111111 1 112223
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 802 VWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
...+.+++.+|++.+|++|||+.|+++.
T Consensus 244 ~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 4568899999999999999999999874
No 177
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.7e-37 Score=337.53 Aligned_cols=258 Identities=22% Similarity=0.343 Sum_probs=199.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 107 (331)
T 4aaa_A 28 ENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD 107 (331)
T ss_dssp EEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCC
Confidence 34579999999999999986 88999999866533 234567899999999999999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV 719 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~ 719 (870)
+++|.+++.. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 108 ~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 180 (331)
T 4aaa_A 108 HTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--GEV 180 (331)
T ss_dssp EEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred cchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC--ccc
Confidence 9999887643 34699999999999999999999999 9999999999999999999999999999865322 222
Q ss_pred cccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHh----------hc-CCcch
Q 002887 720 STTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSML----------AR-GDIKN 787 (870)
Q Consensus 720 ~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~----------~~-~~~~~ 787 (870)
.....|++.|+|||++.+. .++.++|||||||++|||++|+.||........+.......- .. .....
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence 3445789999999999875 789999999999999999999999987665444333322110 00 00001
Q ss_pred hcccccCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 788 IVDHRLQGDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 788 i~d~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...+.+..... ......+.+++.+|++.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111111111 123467899999999999999999999986
No 178
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=337.26 Aligned_cols=238 Identities=24% Similarity=0.355 Sum_probs=198.1
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--------hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~ 632 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++.+....+
T Consensus 26 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~ 105 (335)
T 3dls_A 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQ 105 (335)
T ss_dssp EEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred eEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEE
Confidence 344679999999999999875 88999999986532 13456789999999999999999999999999999
Q ss_pred EEEEEccCC-chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccc
Q 002887 633 LIYEFMANG-NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF 711 (870)
Q Consensus 633 LV~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~ 711 (870)
+||||+.+| +|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 106 lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 106 LVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999877 999888643 4699999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCccccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 712 PVEGGTHVSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 712 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ..
T Consensus 181 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------~~ 238 (335)
T 3dls_A 181 ERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------VE 238 (335)
T ss_dssp CTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------TT
T ss_pred CCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------Hh
Confidence 332 22334679999999999988776 78999999999999999999999752210 00
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
.... .+......+.+++.+|++.+|++|||+.|+++.
T Consensus 239 ~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110 111234568899999999999999999999874
No 179
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.5e-36 Score=335.98 Aligned_cols=243 Identities=22% Similarity=0.363 Sum_probs=202.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||++... ++.+|+|++.... ....+.+.+|+.++++++|+||+++++++.+....++||||+
T Consensus 44 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 123 (335)
T 2owb_A 44 VRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 123 (335)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecC
Confidence 34578999999999999986 7789999987652 234567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 124 ~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~ 196 (335)
T 2owb_A 124 RRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--E 196 (335)
T ss_dssp TTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc--c
Confidence 999999987643 4689999999999999999999998 99999999999999999999999999998763222 2
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||++.+..++.++||||||+++|||++|+.||............ . .+.. ...
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~-~~~~----------~~~ 261 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----K-KNEY----------SIP 261 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----H-HTCC----------CCC
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH----h-cCCC----------CCC
Confidence 234567999999999999988999999999999999999999999865433222211 1 1110 111
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+|++.||++||++.|+++
T Consensus 262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 223346789999999999999999999986
No 180
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.7e-36 Score=336.83 Aligned_cols=247 Identities=23% Similarity=0.378 Sum_probs=198.6
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEcc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
+.+.+.||+|+||.||++... ++.||||++..... ...+|++++.++ +||||+++++++.++...++||||++
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 99 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence 445689999999999999986 88999999976532 346788899888 79999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC----CcEEEEeccCCccccCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK----FQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~----~~vkL~DFGla~~~~~~~ 715 (870)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+.++ +.+||+|||+++......
T Consensus 100 gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 100 GGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp SCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 99999988643 4689999999999999999999998 99999999999998543 359999999998764322
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..... ..+... +..
T Consensus 175 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~i-~~~~~~------~~~ 244 (342)
T 2qr7_A 175 --GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD-TPEEILARI-GSGKFS------LSG 244 (342)
T ss_dssp --CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS-CHHHHHHHH-HHCCCC------CCS
T ss_pred --CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC-CHHHHHHHH-ccCCcc------cCc
Confidence 2234567899999999998888999999999999999999999999754322 122222222 222111 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.........+.+++.+|++.||++||++.|+++
T Consensus 245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 112234567889999999999999999999886
No 181
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1e-36 Score=329.21 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=196.8
Q ss_pred hhccccccccCcEEEEEEEEC---C--eeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD---D--KQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~---~--~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV 634 (870)
+.+.+.||+|+||.||+|++. + ..||||+++... ....+.+.+|++++++++||||+++++++.... .++|
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v 98 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMV 98 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEE
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceee
Confidence 345678999999999999863 2 258999987542 344578899999999999999999999998764 8899
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
+||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 99 TELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred EecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 9999999999998654 35689999999999999999999998 9999999999999999999999999999876433
Q ss_pred CCcc-ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccc
Q 002887 715 GGTH-VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR 792 (870)
Q Consensus 715 ~~~~-~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~ 792 (870)
.... ......++..|+|||++.+..++.++||||||++++||++ |+.||.......... .....+.
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~-------- 242 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGE-------- 242 (291)
T ss_dssp CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCC--------
T ss_pred ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH----HHHccCC--------
Confidence 2221 2234567889999999998889999999999999999999 999998665433222 2221111
Q ss_pred cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 793 LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
...........+.+++.+|++.+|++|||+.++++.|+++...
T Consensus 243 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 243 -RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred -CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0111223456788999999999999999999999999986543
No 182
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-36 Score=325.98 Aligned_cols=241 Identities=27% Similarity=0.382 Sum_probs=201.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||+|++..... ...+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 96 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFA 96 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeC
Confidence 44679999999999999986 78899999976432 23467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++..... .
T Consensus 97 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~----~ 167 (284)
T 2vgo_A 97 PRGELYKELQKH--GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----L 167 (284)
T ss_dssp TTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS----S
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc----c
Confidence 999999998654 4689999999999999999999998 999999999999999999999999999875432 1
Q ss_pred ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD 798 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~ 798 (870)
......|++.|+|||++.+..++.++||||||++++||++|+.||........... .. ... ...+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~-~~~----------~~~~ 232 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRR----IV-NVD----------LKFP 232 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH-TTC----------CCCC
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHH----Hh-ccc----------cCCC
Confidence 22345789999999999999999999999999999999999999986543322211 11 111 1112
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 799 TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+|++.+|++||++.|+++
T Consensus 233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 233456789999999999999999999986
No 183
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.5e-36 Score=330.66 Aligned_cols=251 Identities=19% Similarity=0.297 Sum_probs=196.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEec--CCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDE--GANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~--~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|+.. ++.||||++.... .+.+.+|++++++++ ||||+++++++.. ....++||||+
T Consensus 39 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 39 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred EEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 45689999999999999874 8899999987543 467899999999997 9999999999987 66789999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC-cEEEEeccCCccccCCCCc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF-QAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~vkL~DFGla~~~~~~~~~ 717 (870)
++++|.+++. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+++......
T Consensus 116 ~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-- 185 (330)
T 3nsz_A 116 NNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 185 (330)
T ss_dssp CCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--
T ss_pred CchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--
Confidence 9999998873 488999999999999999999998 999999999999999776 89999999998663322
Q ss_pred cccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCcc-chHHHHHHHH--------hhcCCc--
Q 002887 718 HVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQR-TLIGQWVSSM--------LARGDI-- 785 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~-~~l~~~~~~~--------~~~~~~-- 785 (870)
......|+..|+|||++.+ ..++.++|||||||+++||++|+.||...... ..+....... ......
T Consensus 186 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3nsz_A 186 -EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264 (330)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred -ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence 2344578999999999987 67899999999999999999999999654422 2222211110 000000
Q ss_pred ----chhc--------ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 ----KNIV--------DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ----~~i~--------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.+.. ...............+.+++.+|++.||++|||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 000111111224567899999999999999999999986
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-36 Score=335.09 Aligned_cols=260 Identities=24% Similarity=0.297 Sum_probs=200.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh-----hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ-----GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~-----~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 635 (870)
+.+.+.||+|+||.||+|+.. ++.||||++...... ..+.+.+|++++++++||||+++++++......++||
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVF 91 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEE
Confidence 345679999999999999985 789999999754221 2356889999999999999999999999999999999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.+...
T Consensus 92 e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~- 165 (346)
T 1ua2_A 92 DFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP- 165 (346)
T ss_dssp ECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-
T ss_pred EcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCC-
Confidence 99986 788877543 34688999999999999999999998 9999999999999999999999999999866322
Q ss_pred CccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccch---hc
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIKN---IV 789 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~~---i~ 789 (870)
........||+.|+|||++.+. .++.++|||||||++|||++|++||........+.+.....-... ...+ ..
T Consensus 166 -~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 166 -NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp -CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred -cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 2223456789999999999764 489999999999999999999999987665544444333221110 0000 00
Q ss_pred ccccC---CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 790 DHRLQ---GDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 790 d~~l~---~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
+.... .... ......+.+++.+|++.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 0001 1234678999999999999999999999864
No 185
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.4e-36 Score=323.73 Aligned_cols=240 Identities=19% Similarity=0.254 Sum_probs=195.5
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.+.||+|+||.||+|... ++.||+|++.... .....++.+|+..+.++ +||||+++++++.+....++||||
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~ 92 (289)
T 1x8b_A 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY 92 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEe
Confidence 345689999999999999985 8899999998642 33456788999999999 999999999999999999999999
Q ss_pred ccCCchhhhhhhccc--ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC------------------
Q 002887 638 MANGNLQAHLLEDKA--DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK------------------ 697 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~------------------ 697 (870)
+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.+
T Consensus 93 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 93 CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp CTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------------
T ss_pred cCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 999999999976432 5689999999999999999999998 99999999999999844
Q ss_pred -CcEEEEeccCCccccCCCCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002887 698 -FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 698 -~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~ 775 (870)
..+||+|||++...... ....||+.|+|||.+.+. .++.++|||||||+++||++|++++..... ...
T Consensus 170 ~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~- 239 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHE- 239 (289)
T ss_dssp CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHH-
T ss_pred ceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHH-
Confidence 47999999999865322 234589999999999876 567899999999999999999987653321 111
Q ss_pred HHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 776 VSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+..+... ..+......+.+++.+|++.+|++|||+.|+++
T Consensus 240 ----~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 240 ----IRQGRLP---------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHTTCCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHcCCCC---------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1122111 112223457889999999999999999999975
No 186
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-36 Score=334.35 Aligned_cols=257 Identities=19% Similarity=0.279 Sum_probs=192.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++.+....++||||++
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 116 (329)
T 3gbz_A 37 RRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE 116 (329)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC
Confidence 34579999999999999875 88999999975533 234567899999999999999999999999999999999998
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE-----cCCCcEEEEeccCCccccCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL-----NEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl-----d~~~~vkL~DFGla~~~~~~ 714 (870)
|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.....
T Consensus 117 -~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~ 190 (329)
T 3gbz_A 117 -NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190 (329)
T ss_dssp -EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred -CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence 4999988643 3589999999999999999999998 99999999999999 45556999999999865322
Q ss_pred CCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC--cchhc-c
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD--IKNIV-D 790 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~--~~~i~-d 790 (870)
........||+.|+|||++.+. .++.++|||||||++|||++|+.||........+.+.....-.... ..... .
T Consensus 191 --~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (329)
T 3gbz_A 191 --IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTAL 268 (329)
T ss_dssp -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred --ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhh
Confidence 2223445789999999999875 4899999999999999999999999876655444443332211100 00000 0
Q ss_pred ccc-------CCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 791 HRL-------QGDF-----DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 791 ~~l-------~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.. .... .......+.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000 0113357789999999999999999999975
No 187
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.8e-36 Score=345.41 Aligned_cols=256 Identities=24% Similarity=0.313 Sum_probs=203.1
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh------ccccceeEEEEEecCCeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA------HHKNLTILVGYCDEGANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l------~H~nIv~l~g~~~~~~~~~LV 634 (870)
+.+.+.||+|+||.||+|... ++.||||++.... ...+++.+|++++..+ +|+||+++++++......++|
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 345689999999999999876 7899999997643 3346778899999888 466999999999999999999
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc--EEEEeccCCcccc
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ--AKLADFGLSRIFP 712 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~--vkL~DFGla~~~~ 712 (870)
|||+. ++|.+++.......+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++...
T Consensus 178 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp ECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 99997 6899998876666799999999999999999999998 9999999999999999987 9999999997542
Q ss_pred CCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc--------CC
Q 002887 713 VEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR--------GD 784 (870)
Q Consensus 713 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~--------~~ 784 (870)
. ......||+.|+|||++.+..++.++|||||||++|||++|++||........+..+....-.. ..
T Consensus 254 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~ 328 (429)
T 3kvw_A 254 Q-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR 328 (429)
T ss_dssp C-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTT
T ss_pred C-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhh
Confidence 1 1234578999999999999999999999999999999999999998776555444433211000 00
Q ss_pred cchhcccc---------------------------cCC---CC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 IKNIVDHR---------------------------LQG---DF------DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 ~~~i~d~~---------------------------l~~---~~------~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....++.. +.. .. .......+.+++.+||+.||++|||+.|+++
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~ 408 (429)
T 3kvw_A 329 AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR 408 (429)
T ss_dssp HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence 00011000 000 00 0011456889999999999999999999986
No 188
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.9e-37 Score=347.46 Aligned_cols=241 Identities=18% Similarity=0.124 Sum_probs=188.2
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeecc---chhhhHHHHHHH---HHHHHhccccceeEE-------EEEecCC
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS---SVQGYKQFQAEV---ELLIRAHHKNLTILV-------GYCDEGA 629 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~---~~~~~~~f~~Ei---~~l~~l~H~nIv~l~-------g~~~~~~ 629 (870)
+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+ +++++++||||++++ +++...+
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 3578999999999999964 889999999743 334557889999 555566899999998 6665543
Q ss_pred -----------------eEEEEEEEccCCchhhhhhhcc-----cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCC
Q 002887 630 -----------------NMGLIYEFMANGNLQAHLLEDK-----ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV 687 (870)
Q Consensus 630 -----------------~~~LV~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDL 687 (870)
..++||||+ +|+|.+++.... ...+++..++.|+.|+++||+|||++ +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 278999999 689999987532 13466789999999999999999999 9999999
Q ss_pred CCCCEEEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccC-----------CCCccchHHHHHHHHHHH
Q 002887 688 KSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISN-----------RLTEKSDVYSFGVVLLEL 756 (870)
Q Consensus 688 Kp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~~~ksDVwS~GvvL~el 756 (870)
||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++|||
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 9999999999999999999998531 12345567 999999999887 899999999999999999
Q ss_pred HhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHHhh
Q 002887 757 ITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI--ELNDCL 834 (870)
Q Consensus 757 ltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~--~L~~~~ 834 (870)
++|+.||........ ...+... .......+.+++.+||+.||++|||+.|+++ .++++.
T Consensus 307 ltg~~Pf~~~~~~~~-------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 307 WCADLPITKDAALGG-------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp HHSSCCC------CC-------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred HHCCCCCcccccccc-------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence 999999975432211 1111110 0122356889999999999999999999986 444433
No 189
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.5e-36 Score=325.02 Aligned_cols=258 Identities=21% Similarity=0.311 Sum_probs=201.5
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 4578999999999999986 88999999875432 234678899999999999999999999999999999999998
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++.......+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~ 160 (299)
T 2r3i_A 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTY 160 (299)
T ss_dssp EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC--SBCT
T ss_pred CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC--cccc
Confidence 6999998776656789999999999999999999998 9999999999999999999999999999765322 1223
Q ss_pred ccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc-----chh--cccc
Q 002887 721 TTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI-----KNI--VDHR 792 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~-----~~i--~d~~ 792 (870)
....|++.|+|||.+.+.. ++.++||||||+++|||++|+.||........+.+.....-..... ... ..+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 240 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchh
Confidence 3457899999999998765 7999999999999999999999998766544444433322111100 000 0000
Q ss_pred cCC----CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 793 LQG----DF---DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 793 l~~----~~---~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.. .. .......+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00 0112457889999999999999999999876
No 190
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.7e-36 Score=322.46 Aligned_cols=243 Identities=23% Similarity=0.359 Sum_probs=192.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++......++||||+
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (276)
T 2h6d_A 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYV 93 (276)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEecc
Confidence 34578999999999999986 88999999976532 33467899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 94 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~---~ 165 (276)
T 2h6d_A 94 SGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG---E 165 (276)
T ss_dssp CSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----
T ss_pred CCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC---c
Confidence 999999998653 4689999999999999999999998 9999999999999999999999999999865322 2
Q ss_pred ccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 719 VSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
......|++.|+|||.+.+..+ +.++||||||++++||++|+.||........... +..+.. ..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~----------~~ 230 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-----IRGGVF----------YI 230 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHCCC----------CC
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-----hhcCcc----------cC
Confidence 2234578999999999987765 6899999999999999999999976543322211 111110 11
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
+......+.+++.+|++.+|++|||+.|+++.
T Consensus 231 ~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 12234567899999999999999999999873
No 191
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.2e-36 Score=328.67 Aligned_cols=247 Identities=22% Similarity=0.353 Sum_probs=196.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|... ++.||+|++........+.+.+|++++++++||||+++++++......++||||++++
T Consensus 22 ~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 101 (302)
T 2j7t_A 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGG 101 (302)
T ss_dssp EEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTE
T ss_pred eecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCC
Confidence 44578999999999999986 7899999998776666788999999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST 721 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~ 721 (870)
+|.+++... ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...... .....
T Consensus 102 ~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 175 (302)
T 2j7t_A 102 AVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQKRD 175 (302)
T ss_dssp EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HHC--
T ss_pred cHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc--ccccc
Confidence 999988653 35689999999999999999999998 9999999999999999999999999987543111 11123
Q ss_pred cccCCCCccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 722 TVVGTPGYLDPEYYI-----SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 722 ~~~gt~~y~APE~~~-----~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
...|++.|+|||++. ...++.++||||||+++|||++|+.||............ .... .... .
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~-~~~~-------~ 243 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI----AKSD-PPTL-------L 243 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSC-CCCC-------S
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH----hccC-Cccc-------C
Confidence 456899999999984 567899999999999999999999999865543332221 1111 1000 1
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
........+.+++.+|++.+|++|||+.|+++
T Consensus 244 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 244 TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 12233457889999999999999999999975
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.2e-36 Score=348.81 Aligned_cols=248 Identities=26% Similarity=0.372 Sum_probs=201.4
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.+.||+|+||.||+|+.. ++.||||++.... ......+.+|++++++++||||+++++++......++||||
T Consensus 23 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 102 (486)
T 3mwu_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (486)
T ss_dssp HEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEc
Confidence 3556789999999999999986 8899999997542 23456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc---CCCcEEEEeccCCccccCC
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~vkL~DFGla~~~~~~ 714 (870)
+++|+|.+.+... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.+...
T Consensus 103 ~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 103 YTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 9999999988654 4689999999999999999999998 999999999999995 4567999999999866322
Q ss_pred CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
.......||+.|+|||++.+ .++.++||||+||++|+|++|++||........+.... .+.... .
T Consensus 178 ---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-----~~~~~~------~ 242 (486)
T 3mwu_A 178 ---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE-----TGKYAF------D 242 (486)
T ss_dssp -------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----HTCCCS------C
T ss_pred ---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----hCCCCC------C
Confidence 22345679999999999875 58999999999999999999999998765443332221 111100 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
..........+.+++.+||+.+|++|||+.|+++.
T Consensus 243 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00012334578899999999999999999999863
No 193
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.1e-36 Score=349.60 Aligned_cols=246 Identities=26% Similarity=0.387 Sum_probs=197.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
+.+.+.||+|+||.||+|+.. ++.||+|++.... ......+.+|+.++++++||||+++++++.+....++||||+
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 118 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY 118 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 455689999999999999986 7889999997653 234567899999999999999999999999999999999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC---CcEEEEeccCCccccCCC
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK---FQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~vkL~DFGla~~~~~~~ 715 (870)
++|+|.+.+... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.. +.+||+|||+++.....
T Consensus 119 ~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~- 192 (494)
T 3lij_A 119 KGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ- 192 (494)
T ss_dssp CSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence 999999988643 4689999999999999999999998 99999999999999764 45999999999876422
Q ss_pred CccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 716 GTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
.......||+.|+|||++. +.++.++||||+||++|+|++|++||........+.... .+... ...+.+
T Consensus 193 --~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-----~~~~~-~~~~~~-- 261 (494)
T 3lij_A 193 --KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE-----KGKYT-FDSPEW-- 261 (494)
T ss_dssp --BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----HTCCC-CCSGGG--
T ss_pred --ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----hCCCC-CCchhc--
Confidence 2234567999999999886 568999999999999999999999998765543332221 11110 000111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+.+++.+||+.+|++|||+.|+++
T Consensus 262 ---~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 ---KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp ---TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 123456889999999999999999999985
No 194
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-36 Score=340.11 Aligned_cols=255 Identities=20% Similarity=0.279 Sum_probs=195.8
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec-------------
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE------------- 627 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------------- 627 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+|++++++++||||+++++++..
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 345689999999999999974 8899999987543 233579999999999999999999843
Q ss_pred -------------------------CCeEEEEEEEccCCchhhhhhh--cccccccHHHHHHHHHHHHHHHHHHHhCCCC
Q 002887 628 -------------------------GANMGLIYEFMANGNLQAHLLE--DKADTLCWERRLQIASESAQGLEYLHNGCKP 680 (870)
Q Consensus 628 -------------------------~~~~~LV~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~ 680 (870)
....++||||++ |+|.+.+.. .....+++..+..++.|+++||+|||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 160 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--- 160 (383)
T ss_dssp -------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 334889999999 588777754 2346799999999999999999999998
Q ss_pred CceeCCCCCCCEEEc-CCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHh
Q 002887 681 PIVHRDVKSANILLN-EKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELIT 758 (870)
Q Consensus 681 ~IvHrDLKp~NILld-~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~ellt 758 (870)
+|+||||||+|||++ +++.+||+|||+++.+... .......||+.|+|||++.+. .++.++||||+||++|||++
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 999999999999998 6889999999999866332 223345789999999998875 48999999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHHhhc---------CCcchhcccccC-----CCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 002887 759 GQPVIQKTPQRTLIGQWVSSMLAR---------GDIKNIVDHRLQ-----GDFDTNTVWKAVEIALACIHTISTRRPTMN 824 (870)
Q Consensus 759 G~~p~~~~~~~~~l~~~~~~~~~~---------~~~~~i~d~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~ 824 (870)
|++||........+.+.+...-.. ....+..-+.+. ...+......+.+++.+|++.+|++|||+.
T Consensus 238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 317 (383)
T 3eb0_A 238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY 317 (383)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 999998776555544443321110 000000000100 011222345688999999999999999999
Q ss_pred HHHH
Q 002887 825 QVVI 828 (870)
Q Consensus 825 eVl~ 828 (870)
|+++
T Consensus 318 e~l~ 321 (383)
T 3eb0_A 318 EAMA 321 (383)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9984
No 195
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-36 Score=335.80 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=203.7
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccchhh-----------------hHHHHHHHHHHHHhccccceeEEEEEe
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQG-----------------YKQFQAEVELLIRAHHKNLTILVGYCD 626 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~-----------------~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 626 (870)
.+.+.||+|+||.||+|...++.||||++....... .+.+.+|++++++++||||+++++++.
T Consensus 34 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 34 RIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 445789999999999999999999999997653221 178999999999999999999999999
Q ss_pred cCCeEEEEEEEccCCchhhh------hhhcccccccHHHHHHHHHHHHHHHHHHHh-CCCCCceeCCCCCCCEEEcCCCc
Q 002887 627 EGANMGLIYEFMANGNLQAH------LLEDKADTLCWERRLQIASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQ 699 (870)
Q Consensus 627 ~~~~~~LV~Ey~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~IvHrDLKp~NILld~~~~ 699 (870)
+.+..++||||+++|+|.++ +.......+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEECTTSC
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEcCCCc
Confidence 99999999999999999998 654445789999999999999999999998 7 9999999999999999999
Q ss_pred EEEEeccCCccccCCCCccccccccCCCCccCccccccC-CCCc-cchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHH
Q 002887 700 AKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISN-RLTE-KSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVS 777 (870)
Q Consensus 700 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~-ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~ 777 (870)
+||+|||++...... ......|++.|+|||++.+. .++. ++||||||++++||++|+.||..........+.
T Consensus 191 ~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-- 264 (348)
T 2pml_X 191 VKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNN-- 264 (348)
T ss_dssp EEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHH--
T ss_pred EEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH--
Confidence 999999999865322 33456799999999999877 5666 999999999999999999999876542222211
Q ss_pred HHhhcCCcchhcc------cccC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 778 SMLARGDIKNIVD------HRLQ---GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 778 ~~~~~~~~~~i~d------~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+..+......+ +... ..........+.+++.+|++.+|++|||+.|+++
T Consensus 265 --i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 265 --IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp --HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11121110000 0000 0001234467889999999999999999999986
No 196
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.9e-35 Score=325.00 Aligned_cols=249 Identities=23% Similarity=0.368 Sum_probs=196.2
Q ss_pred HHhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--------hhhHHHHHHHHHHHHhccccceeEEEEEecCCe
Q 002887 561 ITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN 630 (870)
Q Consensus 561 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~ 630 (870)
..+.+.+.||+|+||.||+|... ++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 34556789999999999999985 78999999875421 22346889999999999999999999997654
Q ss_pred EEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc---EEEEeccC
Q 002887 631 MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGL 707 (870)
Q Consensus 631 ~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---vkL~DFGl 707 (870)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++. +||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 8999999999999998864 35789999999999999999999998 9999999999999987665 99999999
Q ss_pred CccccCCCCccccccccCCCCccCccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC
Q 002887 708 SRIFPVEGGTHVSTTVVGTPGYLDPEYYI---SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784 (870)
Q Consensus 708 a~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~ 784 (870)
++.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||........+...+. .+.
T Consensus 164 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~ 236 (322)
T 2ycf_A 164 SKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT----SGK 236 (322)
T ss_dssp CEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH----HTC
T ss_pred ceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH----hCc
Confidence 986532 22234457999999999974 46689999999999999999999999986554433332221 111
Q ss_pred cchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
... .+... ......+.+++.+|++.||++||++.|+++
T Consensus 237 ~~~--~~~~~----~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YNF--IPEVW----AEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCC--CHHHH----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccc--Cchhh----hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 100 00000 122457889999999999999999999985
No 197
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=334.94 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=194.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchh-hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ-GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~-~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++...... ....+.+|++++++++||||+++++++......++||||++
T Consensus 5 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 83 (324)
T 3mtl_A 5 IKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD- 83 (324)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-
T ss_pred EEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-
Confidence 34578999999999999986 788999999765332 22356689999999999999999999999999999999998
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..... ....
T Consensus 84 ~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~ 157 (324)
T 3mtl_A 84 KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TKTY 157 (324)
T ss_dssp EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC--cccc
Confidence 5888887653 35689999999999999999999998 9999999999999999999999999999764322 2223
Q ss_pred ccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc--CCcchhccc------
Q 002887 721 TTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR--GDIKNIVDH------ 791 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~--~~~~~i~d~------ 791 (870)
....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........+.......-.. .........
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 34578999999999976 568999999999999999999999998766554444333221111 001111000
Q ss_pred ---ccCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 792 ---RLQGDF----DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 792 ---~l~~~~----~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...... .......+.+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 0122356789999999999999999999986
No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-35 Score=332.61 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=189.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCC------eEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA------NMGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~L 633 (870)
.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|+.++++++||||+++++++.... ..++
T Consensus 28 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~l 107 (371)
T 2xrw_A 28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYI 107 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEE
T ss_pred eEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEE
Confidence 34578999999999999875 889999999764 2334567889999999999999999999997654 7899
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+++ +|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 108 VMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp EEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred EEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 9999985 6777764 3588999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHH--------------
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM-------------- 779 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~-------------- 779 (870)
........||+.|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus 180 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 256 (371)
T 2xrw_A 180 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256 (371)
T ss_dssp -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred ---ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence 122344679999999999999999999999999999999999999998765433222221100
Q ss_pred ----hhcC------CcchhcccccCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 780 ----LARG------DIKNIVDHRLQGDF---DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 780 ----~~~~------~~~~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.... .....+........ .......+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000 00000100110111 1123567899999999999999999999987
No 199
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-35 Score=322.62 Aligned_cols=246 Identities=24% Similarity=0.337 Sum_probs=200.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---------hhhhHHHHHHHHHHHHhc-cccceeEEEEEecCCeE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---------VQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGANM 631 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---------~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~ 631 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|++++++++ ||||+++++++......
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 99 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF 99 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeE
Confidence 34578999999999999985 7899999997543 123456889999999995 99999999999999999
Q ss_pred EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccc
Q 002887 632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF 711 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~ 711 (870)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 100 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 100 FLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 9999999999999998643 4689999999999999999999998 9999999999999999999999999999865
Q ss_pred cCCCCccccccccCCCCccCccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 712 PVEGGTHVSTTVVGTPGYLDPEYYI------SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 712 ~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
... .......|++.|+|||++. ...++.++||||||++++||++|+.||........... .. .+..
T Consensus 175 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~-~~~~ 246 (298)
T 1phk_A 175 DPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM----IM-SGNY 246 (298)
T ss_dssp CTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HH-HTCC
T ss_pred CCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHH----Hh-cCCc
Confidence 322 2234467899999999985 45688999999999999999999999976543322221 11 1111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ............+.+++.+|++.+|++|||+.|+++
T Consensus 247 ~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 247 Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred c------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 0 001111234567889999999999999999999975
No 200
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.8e-36 Score=334.93 Aligned_cols=247 Identities=23% Similarity=0.377 Sum_probs=199.6
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--------hhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--------QGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANM 631 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~ 631 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|+.+++++ +||||+++++++......
T Consensus 96 y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 175 (365)
T 2y7j_A 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFM 175 (365)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEE
T ss_pred cccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEE
Confidence 344579999999999999985 88999999875431 1245678999999999 899999999999999999
Q ss_pred EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccc
Q 002887 632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF 711 (870)
Q Consensus 632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~ 711 (870)
++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+|||++..+
T Consensus 176 ~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 176 FLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 9999999999999998643 4689999999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCccccccccCCCCccCcccccc------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 712 PVEGGTHVSTTVVGTPGYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 712 ~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... +..+..
T Consensus 251 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~-----i~~~~~ 322 (365)
T 2y7j_A 251 EPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM-----IMEGQY 322 (365)
T ss_dssp CTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHTCC
T ss_pred CCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHH-----HHhCCC
Confidence 432 22345679999999999864 3578899999999999999999999976543322221 111111
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ...+.+ ......+.+++.+|++.+|++|||+.|+++
T Consensus 323 ~-~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 323 Q-FSSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp C-CCHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred C-CCCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 000000 012356889999999999999999999986
No 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-36 Score=328.26 Aligned_cols=245 Identities=26% Similarity=0.414 Sum_probs=193.9
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEec------CCeEEEEE
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDE------GANMGLIY 635 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~------~~~~~LV~ 635 (870)
+.+.||+|+||.||+|+.. ++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. ....++||
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~ 106 (326)
T 2x7f_A 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM 106 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence 4579999999999999984 8899999987543 3456789999999999 89999999999976 46789999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
||+++|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 182 (326)
T 2x7f_A 107 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT- 182 (326)
T ss_dssp ECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC------
T ss_pred EcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCcC-
Confidence 999999999999876667899999999999999999999998 9999999999999999999999999999865322
Q ss_pred CccccccccCCCCccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 716 GTHVSTTVVGTPGYLDPEYYI-----SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 716 ~~~~~~~~~gt~~y~APE~~~-----~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
........|++.|+|||++. +..++.++|||||||++|||++|+.||............ .. +..
T Consensus 183 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~-~~~----- 251 (326)
T 2x7f_A 183 -VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PR-NPA----- 251 (326)
T ss_dssp ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HH-SCC-----
T ss_pred -ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hc-Ccc-----
Confidence 11223457899999999997 566899999999999999999999999765533222211 11 111
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.+ ........+.+++.+||+.+|++||++.|+++
T Consensus 252 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111 11123457889999999999999999999986
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.8e-36 Score=350.85 Aligned_cols=247 Identities=25% Similarity=0.386 Sum_probs=203.4
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
.+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++++++||||+++++++.+....++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 4556789999999999999985 8899999997543 2345678999999999999999999999999999999999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~ 713 (870)
|+.+|+|.+.+... ..+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 107 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 107 VYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred cCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 99999999988643 4699999999999999999999999 99999999999999 5678999999999987632
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
. .......||+.|+|||++.+ .++.++||||+||++|+|++|++||........+..+ ..+... .
T Consensus 182 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-----~~~~~~------~ 246 (484)
T 3nyv_A 182 S---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----EKGKYT------F 246 (484)
T ss_dssp C---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHCCCC------C
T ss_pred c---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-----HcCCCC------C
Confidence 2 22344579999999999876 6899999999999999999999999876544333222 112111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...........+.+++.+|++.+|++|||+.|+++
T Consensus 247 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00011233467889999999999999999999986
No 203
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-35 Score=335.64 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=199.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc--------cccceeEEEEEe----cC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH--------HKNLTILVGYCD----EG 628 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~--------H~nIv~l~g~~~----~~ 628 (870)
+.+.+.||+|+||.||+|+.. ++.||||++... ....+.+.+|++++++++ |+||+++++++. ..
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~ 117 (397)
T 1wak_A 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNG 117 (397)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTE
T ss_pred EEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCC
Confidence 445689999999999999875 889999999754 334567899999999996 788999999987 56
Q ss_pred CeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----------
Q 002887 629 ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---------- 698 (870)
Q Consensus 629 ~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---------- 698 (870)
...++||||+ +++|.+.+.......+++..+..++.|+++||+|||+++ +|+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 118 THICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred ceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 6899999999 566777776655567999999999999999999999853 899999999999999775
Q ss_pred ---------------------------------------cEEEEeccCCccccCCCCccccccccCCCCccCccccccCC
Q 002887 699 ---------------------------------------QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNR 739 (870)
Q Consensus 699 ---------------------------------------~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~ 739 (870)
.+||+|||+++..... .....||+.|+|||++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcCCC
Confidence 7999999999865321 23457899999999999999
Q ss_pred CCccchHHHHHHHHHHHHhCCCCCCCCCccc------hHHHHHHHHhh--------cCCc-chhcccc--c---------
Q 002887 740 LTEKSDVYSFGVVLLELITGQPVIQKTPQRT------LIGQWVSSMLA--------RGDI-KNIVDHR--L--------- 793 (870)
Q Consensus 740 ~~~ksDVwS~GvvL~elltG~~p~~~~~~~~------~l~~~~~~~~~--------~~~~-~~i~d~~--l--------- 793 (870)
++.++|||||||++|||++|+.||....... .+... ..... .+.. .+.+... +
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI-IELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHH-HHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHH-HHhcCCCChHHhhcccccccccCCccccccccccCCc
Confidence 9999999999999999999999997654221 11111 11110 0100 0000000 0
Q ss_pred --------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 --------QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 --------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...........+.+++.+||+.||++|||+.|+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred chhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 01234566778999999999999999999999985
No 204
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-35 Score=342.01 Aligned_cols=190 Identities=25% Similarity=0.384 Sum_probs=150.5
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEec-----CCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDE-----GANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-----~~~~~L 633 (870)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+++.+|+++|++++||||+++++++.. ....++
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 345689999999999999875 789999999754 33445778999999999999999999999943 357899
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+. |+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 135 v~e~~~-~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 135 VLEIAD-SDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EECCCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEeccc-cchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 999885 688888853 35699999999999999999999998 999999999999999999999999999987642
Q ss_pred CCCc-------------------------cccccccCCCCccCcccc-ccCCCCccchHHHHHHHHHHHHh
Q 002887 714 EGGT-------------------------HVSTTVVGTPGYLDPEYY-ISNRLTEKSDVYSFGVVLLELIT 758 (870)
Q Consensus 714 ~~~~-------------------------~~~~~~~gt~~y~APE~~-~~~~~~~ksDVwS~GvvL~ellt 758 (870)
.... ......+||+.|+|||++ ....++.++|||||||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 2111 123445789999999986 45679999999999999999999
No 205
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2e-35 Score=325.57 Aligned_cols=255 Identities=18% Similarity=0.286 Sum_probs=203.3
Q ss_pred hhccccccccCcEEEEEEEE---CCeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc------ceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYL---DDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN------LTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~---~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+|.. .++.||||++.... ...+.+.+|++++++++|++ ++++++++......++
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~l 94 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICI 94 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEE
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEE
Confidence 44568999999999999987 37899999997543 34567899999999998775 9999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-----------------
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE----------------- 696 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~----------------- 696 (870)
||||+ +++|.+++.......+++..+..++.|+++||+|||++ +|+||||||+|||++.
T Consensus 95 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 95 VFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 99999 88999999776656799999999999999999999998 9999999999999987
Q ss_pred --CCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHH
Q 002887 697 --KFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774 (870)
Q Consensus 697 --~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~ 774 (870)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 245 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245 (339)
T ss_dssp ESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred ccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 668999999999864221 2345789999999999999999999999999999999999999987654433322
Q ss_pred HHHHHhhc--------CCcchhcc--------------------ccc--CCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 002887 775 WVSSMLAR--------GDIKNIVD--------------------HRL--QGDFDTNTVWKAVEIALACIHTISTRRPTMN 824 (870)
Q Consensus 775 ~~~~~~~~--------~~~~~i~d--------------------~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~ 824 (870)
... .... ........ ..+ ...........+.+++.+|++.||++|||+.
T Consensus 246 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 324 (339)
T 1z57_A 246 MER-ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324 (339)
T ss_dssp HHH-HHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHH-HhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence 211 1100 00000000 000 0111235567899999999999999999999
Q ss_pred HHHH
Q 002887 825 QVVI 828 (870)
Q Consensus 825 eVl~ 828 (870)
|+++
T Consensus 325 ell~ 328 (339)
T 1z57_A 325 EALK 328 (339)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 206
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.3e-36 Score=343.95 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=193.8
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecC------CeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG------ANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~LV~ 635 (870)
...+.||+|+||.||+|++. ++.||||++.... ..+.+|++++++++|+||+++++++... ...++||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 44578999999999999985 8899999986542 2345799999999999999999998432 2367899
Q ss_pred EEccCCchhhhhhh--cccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC-CcEEEEeccCCcccc
Q 002887 636 EFMANGNLQAHLLE--DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK-FQAKLADFGLSRIFP 712 (870)
Q Consensus 636 Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~-~~vkL~DFGla~~~~ 712 (870)
||+++ ++.+.+.. .....+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 99986 56555543 2346799999999999999999999998 99999999999999965 678999999998763
Q ss_pred CCCCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc---------
Q 002887 713 VEGGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR--------- 782 (870)
Q Consensus 713 ~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~--------- 782 (870)
... ......||+.|+|||++.+. .++.++|||||||++|||++|++||........+.++++..-..
T Consensus 209 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~ 285 (420)
T 1j1b_A 209 RGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285 (420)
T ss_dssp TTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHC
T ss_pred cCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 322 22345789999999999765 79999999999999999999999998776555554444321100
Q ss_pred CCcchhcccccCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 783 GDIKNIVDHRLQGD-----FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 783 ~~~~~i~d~~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....+...+.+... +.......+.+|+.+||+.||++||++.|+++
T Consensus 286 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp SCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00011111111000 11223467899999999999999999999985
No 207
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.5e-36 Score=337.36 Aligned_cols=257 Identities=22% Similarity=0.287 Sum_probs=200.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|++++++++||||+++++++..+...++||||+++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 115 (360)
T 3eqc_A 36 EKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115 (360)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCC
Confidence 34578999999999999986 8899999998653 34457789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++... ..+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+|||++..... ...
T Consensus 116 ~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~ 187 (360)
T 3eqc_A 116 GSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMA 187 (360)
T ss_dssp CBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----HC-
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc----ccc
Confidence 9999998653 46899999999999999999999831 799999999999999999999999999875421 122
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHH---------------------
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSM--------------------- 779 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~--------------------- 779 (870)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+....
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF 267 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence 34579999999999999999999999999999999999999998654322111100000
Q ss_pred ----hhcCCcchhccc----ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 780 ----LARGDIKNIVDH----RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 780 ----~~~~~~~~i~d~----~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.......+.++. .............+.+++.+|++.+|++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000011110 0000011123457889999999999999999999986
No 208
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9.6e-37 Score=331.19 Aligned_cols=257 Identities=25% Similarity=0.393 Sum_probs=184.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 97 (303)
T 2vwi_A 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97 (303)
T ss_dssp EEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTT
T ss_pred hhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccC
Confidence 45679999999999999874 8899999987543 23456788999999999999999999999999999999999999
Q ss_pred Cchhhhhhhc------ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 641 GNLQAHLLED------KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 641 gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 174 (303)
T 2vwi_A 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174 (303)
T ss_dssp CBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC--
T ss_pred CchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccC
Confidence 9999988642 234689999999999999999999998 9999999999999999999999999998765332
Q ss_pred CC---ccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887 715 GG---THVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD 790 (870)
Q Consensus 715 ~~---~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d 790 (870)
.. ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||............ .. +.......
T Consensus 175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~-~~~~~~~~ 249 (303)
T 2vwi_A 175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT----LQ-NDPPSLET 249 (303)
T ss_dssp -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH----HT-SSCCCTTC
T ss_pred CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH----hc-cCCCcccc
Confidence 11 112234579999999999876 56899999999999999999999999876544332211 11 11111100
Q ss_pred cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..............+.+++.+|++.+|++||++.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00001111223356789999999999999999999986
No 209
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-36 Score=335.82 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=193.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCC------eEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA------NMGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~L 633 (870)
.+.+.||+|+||.||+|... ++.||||++... .....+++.+|++++++++||||+++++++.... ..++
T Consensus 28 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 107 (367)
T 1cm8_A 28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107 (367)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEE
Confidence 34578999999999999985 889999998653 2334567899999999999999999999997653 4699
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 108 VMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp EEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 99999 7899998854 4689999999999999999999998 999999999999999999999999999986532
Q ss_pred CCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC---------
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--------- 783 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--------- 783 (870)
......+|+.|+|||++.+ ..++.++||||+||+++||++|+.||........+.......-...
T Consensus 181 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 181 -----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp -----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred -----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhh
Confidence 1234578999999999987 6799999999999999999999999987665444333322110000
Q ss_pred -Ccchhc-------ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 784 -DIKNIV-------DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 784 -~~~~i~-------d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.....+ ...+. .........+.+++.+|++.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000 00000 011223467889999999999999999999987
No 210
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.6e-35 Score=325.42 Aligned_cols=258 Identities=23% Similarity=0.344 Sum_probs=201.7
Q ss_pred hccccccccCcEEEEEEEEC---CeeEEEEEeeccch--hhhHHHHHHHHHHHHh---ccccceeEEEEEe-----cCCe
Q 002887 564 NFERVLGKGGFGTVYHGYLD---DKQVAVKMLSSSSV--QGYKQFQAEVELLIRA---HHKNLTILVGYCD-----EGAN 630 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~---~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l---~H~nIv~l~g~~~-----~~~~ 630 (870)
.+.+.||+|+||.||+|... ++.||+|++..... .....+.+|+.+++++ +||||+++++++. ....
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 93 (326)
T 1blx_A 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK 93 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred eeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCce
Confidence 34679999999999999973 78899999875432 2234677888888777 8999999999987 5667
Q ss_pred EEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 631 MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 631 ~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
.++||||++ |+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 169 (326)
T 1blx_A 94 LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI 169 (326)
T ss_dssp EEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCccccc
Confidence 899999998 6999998776656799999999999999999999998 999999999999999999999999999986
Q ss_pred ccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC---Ccch
Q 002887 711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG---DIKN 787 (870)
Q Consensus 711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~---~~~~ 787 (870)
... ........|++.|+|||++.+..++.++||||||+++|||++|+.||........+.......-... +...
T Consensus 170 ~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (326)
T 1blx_A 170 YSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD 246 (326)
T ss_dssp CCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred ccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccc
Confidence 532 1233456789999999999999999999999999999999999999987665444443332211110 0000
Q ss_pred ------hcccc---cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 788 ------IVDHR---LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 788 ------i~d~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.+... ............+.+++.+|++.+|++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 000111234467889999999999999999999985
No 211
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.3e-36 Score=359.09 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=204.6
Q ss_pred hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 636 (870)
..+.+.||+|+||.||+|.+. +..||||++.... ....+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEEE
Confidence 345678999999999999974 4569999987643 3345779999999999999999999999854 56899999
Q ss_pred EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887 637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~ 716 (870)
|+++|+|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 471 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~-~ 545 (656)
T 2j0j_A 471 LCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-T 545 (656)
T ss_dssp CCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred cCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCC-c
Confidence 99999999998643 34689999999999999999999998 9999999999999999999999999999876322 2
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG 795 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~ 795 (870)
........+++.|+|||++.+..++.++|||||||++|||++ |+.||............ ..+.. .
T Consensus 546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i-----~~~~~---------~ 611 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-----ENGER---------L 611 (656)
T ss_dssp --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-----HHTCC---------C
T ss_pred ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-----HcCCC---------C
Confidence 222234567789999999999999999999999999999997 99999866543322221 11110 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
..+......+.+++.+|++.+|++|||+.|+++.|++++..+
T Consensus 612 ~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 122334567889999999999999999999999999987554
No 212
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.1e-35 Score=340.76 Aligned_cols=256 Identities=18% Similarity=0.266 Sum_probs=204.3
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhcc-ccceeEEEEEecCCeEEEEEEEccC
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH-KNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
.+.+.||+|+||.||+|+.. ++.||||++..... ..++.+|+++++.++| +++..+..++.+....++||||+ +
T Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g 86 (483)
T 3sv0_A 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-G 86 (483)
T ss_dssp ECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-C
T ss_pred EEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-C
Confidence 45689999999999999975 88999998876533 3568899999999977 55666666677788899999999 9
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE---cCCCcEEEEeccCCccccCCCCc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL---NEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl---d~~~~vkL~DFGla~~~~~~~~~ 717 (870)
++|.+++... ...+++..++.|+.||+.||+|||++ +|+||||||+|||+ ++++.+||+|||+++.+......
T Consensus 87 ~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (483)
T 3sv0_A 87 PSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162 (483)
T ss_dssp CBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred CCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence 9999998643 35799999999999999999999998 99999999999999 68899999999999876433221
Q ss_pred -----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH---HHHHhhcCCcchhc
Q 002887 718 -----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW---VSSMLARGDIKNIV 789 (870)
Q Consensus 718 -----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~---~~~~~~~~~~~~i~ 789 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+ ..... ......+.
T Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~l~ 241 (483)
T 3sv0_A 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-ATSIEALC 241 (483)
T ss_dssp CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-HSCHHHHH
T ss_pred cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-cccHHHHh
Confidence 1123567999999999999999999999999999999999999999876543322211 11111 11111110
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.....++.+++..|++.+|++||++.+|+++|++++..
T Consensus 242 ---------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 242 ---------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp ---------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 11235788999999999999999999999999998754
No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.8e-36 Score=338.61 Aligned_cols=249 Identities=10% Similarity=-0.016 Sum_probs=180.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHh--ccccceeEE-------EEEecC-
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRA--HHKNLTILV-------GYCDEG- 628 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l--~H~nIv~l~-------g~~~~~- 628 (870)
.+.+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++..+ +||||++++ +.+...
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETT
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCC
Confidence 34578999999999999975 88999999987543 3455678886666666 599988755 343322
Q ss_pred ----------------CeEEEEEEEccCCchhhhhhhcccccccHHHH------HHHHHHHHHHHHHHHhCCCCCceeCC
Q 002887 629 ----------------ANMGLIYEFMANGNLQAHLLEDKADTLCWERR------LQIASESAQGLEYLHNGCKPPIVHRD 686 (870)
Q Consensus 629 ----------------~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~aL~yLH~~~~~~IvHrD 686 (870)
...++||||++ |+|.+++.... ..+.+..+ +.++.|+++||+|||++ +|+|||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 34799999999 89999997642 23455566 78889999999999998 999999
Q ss_pred CCCCCEEEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002887 687 VKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYIS--NRLTEKSDVYSFGVVLLELITGQPVIQ 764 (870)
Q Consensus 687 LKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~ksDVwS~GvvL~elltG~~p~~ 764 (870)
|||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 294 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999986521 1124457799999999987 679999999999999999999999998
Q ss_pred CCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 765 KTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 765 ~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
........ ..............+...........+.+++.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 295 LVTPGIKG------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp BCCTTCTT------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CcCccccc------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 65322100 00000000011111111111234567889999999999999999999975
No 214
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.4e-36 Score=361.26 Aligned_cols=243 Identities=25% Similarity=0.352 Sum_probs=202.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.||+|+||.||+|+.. ++.||||+++... ....+.+..|..++..+ +|++|+++++++.+....++||||
T Consensus 344 ~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~ 423 (674)
T 3pfq_A 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY 423 (674)
T ss_dssp EEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEEC
T ss_pred EEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeC
Confidence 45679999999999999986 7789999998642 23456678899999887 799999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++|+|..++... ..+++..+..++.||+.||+|||+. +|+||||||+||||+.++.+||+|||+++..... .
T Consensus 424 ~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~--~ 496 (674)
T 3pfq_A 424 VNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--G 496 (674)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT--T
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC--C
Confidence 9999999999753 4699999999999999999999998 9999999999999999999999999999864222 2
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF 797 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~ 797 (870)
.......||+.|+|||++.+..++.++|||||||++|||++|++||........... ... +. ..+
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~----i~~-~~----------~~~ 561 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS----IME-HN----------VAY 561 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHS-SC----------CCC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHH----HHh-CC----------CCC
Confidence 234567899999999999999999999999999999999999999987554333222 221 11 112
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTM-----NQVVI 828 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm-----~eVl~ 828 (870)
+......+.+|+.+||+.||++||++ +||++
T Consensus 562 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 23345678899999999999999997 55543
No 215
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=324.97 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=198.8
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.+.||+|+||.||+|... ++.||+|++.... ..+.+.+|++++++++||||+++++++......++||||+++
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 108 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCC
Confidence 345679999999999999986 8899999997653 346789999999999999999999999999999999999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
|+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++...... ....
T Consensus 109 ~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~ 182 (314)
T 3com_A 109 GSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT--MAKR 182 (314)
T ss_dssp EEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--BSCB
T ss_pred CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--cccc
Confidence 999998853 245789999999999999999999998 9999999999999999999999999999865322 1223
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN 800 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~ 800 (870)
....|++.|+|||.+.+..++.++||||||+++|||++|+.||........... ....... .+ .....
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~-----~~--~~~~~ 250 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM-----IPTNPPP-----TF--RKPEL 250 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHSCCC-----CC--SSGGG
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH-----HhcCCCc-----cc--CCccc
Confidence 445789999999999998999999999999999999999999986543222111 1111100 00 11122
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 801 TVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....+.+++.+|++.+|++|||+.|+++
T Consensus 251 ~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 251 WSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 3457889999999999999999999986
No 216
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=323.23 Aligned_cols=258 Identities=23% Similarity=0.325 Sum_probs=193.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEe--------------c
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD--------------E 627 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--------------~ 627 (870)
...+.||+|+||.||+|... ++.||+|++........+++.+|++++++++||||+++++++. +
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 93 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCS
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccc
Confidence 34578999999999999986 8899999998777677788999999999999999999999873 4
Q ss_pred CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc-CCCcEEEEecc
Q 002887 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFG 706 (870)
Q Consensus 628 ~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~vkL~DFG 706 (870)
....++||||++ |+|.+++.. ..+++..+..++.|+++||+|||++ +|+||||||+||+++ +++.+||+|||
T Consensus 94 ~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg 166 (320)
T 2i6l_A 94 LNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFG 166 (320)
T ss_dssp CSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCc
Confidence 467899999998 699998843 4689999999999999999999998 999999999999997 56799999999
Q ss_pred CCccccCCCC-ccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc--
Q 002887 707 LSRIFPVEGG-THVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR-- 782 (870)
Q Consensus 707 la~~~~~~~~-~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~-- 782 (870)
+++....... ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...................
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (320)
T 2i6l_A 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246 (320)
T ss_dssp TCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCH
T ss_pred cccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCch
Confidence 9986532211 112234567999999999875 678999999999999999999999998766443333322211000
Q ss_pred -------CCcchhcccccCCC-C-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 783 -------GDIKNIVDHRLQGD-F-----DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 783 -------~~~~~i~d~~l~~~-~-----~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..+...+....... . .......+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00000000001000 0 0123467889999999999999999999986
No 217
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.8e-35 Score=323.74 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=192.6
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhc--cccceeEEEEEecCCeEEEEEEEc
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAH--HKNLTILVGYCDEGANMGLIYEFM 638 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~LV~Ey~ 638 (870)
.+.+.||+|+||.||++... ++.||||++.... ....+.+.+|++++.+++ |+||+++++++......++||| +
T Consensus 31 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~ 109 (313)
T 3cek_A 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-C 109 (313)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-C
T ss_pred EEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-c
Confidence 44579999999999999986 7889999997543 345577899999999997 4999999999999999999999 6
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
.+++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||+++ +.+||+|||+++.........
T Consensus 110 ~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~ 183 (313)
T 3cek_A 110 GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV 183 (313)
T ss_dssp CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC--------
T ss_pred CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCccccc
Confidence 788999998753 4689999999999999999999998 9999999999999975 799999999998764333322
Q ss_pred ccccccCCCCccCcccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcch
Q 002887 719 VSTTVVGTPGYLDPEYYIS-----------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKN 787 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~-----------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~ 787 (870)
......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ......
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~------- 253 (313)
T 3cek_A 184 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAII------- 253 (313)
T ss_dssp ------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHH-------
T ss_pred cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHH-------
Confidence 3345679999999999875 4688899999999999999999999976433211 111111
Q ss_pred hcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 788 IVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 788 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
++.............+.+++.+|++.+|++||++.|+++.
T Consensus 254 --~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 254 --DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp --CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1111112222234578899999999999999999999864
No 218
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.4e-36 Score=337.68 Aligned_cols=256 Identities=22% Similarity=0.312 Sum_probs=193.9
Q ss_pred hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC------eEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA------NMGLIY 635 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~LV~ 635 (870)
+.+.+.||+|+||.||+|+.. +..+|+|++..... ...+|++++++++||||+++++++.... ..++||
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 345689999999999999986 66799998865432 2347999999999999999999995433 378999
Q ss_pred EEccCCchhhhhhh-cccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc-CCCcEEEEeccCCccccC
Q 002887 636 EFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 636 Ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~vkL~DFGla~~~~~ 713 (870)
||++++.+...... .....+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 99997644433221 2246799999999999999999999998 999999999999999 799999999999987633
Q ss_pred CCCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC--c----c
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD--I----K 786 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~--~----~ 786 (870)
.. ......||+.|+|||++.+. .++.++|||||||++|||++|++||........+.++.+..-.... + .
T Consensus 195 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 271 (394)
T 4e7w_A 195 GE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271 (394)
T ss_dssp TC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCG
T ss_pred CC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhCh
Confidence 22 22345789999999999765 5899999999999999999999999877655554444332110000 0 0
Q ss_pred hhcccccC--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 787 NIVDHRLQ--------GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 787 ~i~d~~l~--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+. ..+.......+.+++.+||+.||++|||+.|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp GGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00000000 0011123457899999999999999999999986
No 219
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=8.3e-36 Score=321.94 Aligned_cols=247 Identities=21% Similarity=0.237 Sum_probs=182.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-h-hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-Q-GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~-~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||||++..... . ..+.+.++...++.++||||+++++++.++...++||||++
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (290)
T 3fme_A 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD 89 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS
T ss_pred hhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc
Confidence 45679999999999999984 89999999976522 2 22334455556777899999999999999999999999998
Q ss_pred CCchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 640 NGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 640 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
|+|.+++... ....+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 -~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 163 (290)
T 3fme_A 90 -TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD--- 163 (290)
T ss_dssp -EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------------
T ss_pred -cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccccc---
Confidence 5887777542 3467999999999999999999999842 8999999999999999999999999999865322
Q ss_pred cccccccCCCCccCcccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 718 HVSTTVVGTPGYLDPEYY----ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~----~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
.......||+.|+|||++ .+..++.++||||||++++||++|+.||........ . ..........
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~-~~~~~~~~~~-------- 232 (290)
T 3fme_A 164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ--Q-LKQVVEEPSP-------- 232 (290)
T ss_dssp ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH--H-HHHHHHSCCC--------
T ss_pred ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH--H-HHHHhccCCC--------
Confidence 222345799999999996 456789999999999999999999999975432211 1 1111211110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..........+.+++.+|++.+|++|||+.|+++
T Consensus 233 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 -QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111223456889999999999999999999987
No 220
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3e-35 Score=327.38 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=198.4
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEec--------CCe
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDE--------GAN 630 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--------~~~ 630 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... .....+.+|++++++++||||+++++++.. ...
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 98 (351)
T 3mi9_A 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGS 98 (351)
T ss_dssp EEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CE
T ss_pred eeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCce
Confidence 345678999999999999985 88999999865532 234578899999999999999999999976 346
Q ss_pred EEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 631 MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 631 ~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
.++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 99 ~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 99 IYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 8999999985 677766543 34699999999999999999999998 999999999999999999999999999987
Q ss_pred ccCCCC--ccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc--CCc
Q 002887 711 FPVEGG--THVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR--GDI 785 (870)
Q Consensus 711 ~~~~~~--~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~--~~~ 785 (870)
+..... ........||+.|+|||++.+ ..++.++|||||||+++||++|++||........+.......... ...
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 253 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 642221 122345678999999999976 458999999999999999999999998766544433322211100 000
Q ss_pred chhccccc-------CC-CCCH-HH------HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 KNIVDHRL-------QG-DFDT-NT------VWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ~~i~d~~l-------~~-~~~~-~~------~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...-...+ .. .... .. ...+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 01000000 00 0011 11 245789999999999999999999886
No 221
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.5e-36 Score=348.60 Aligned_cols=246 Identities=27% Similarity=0.370 Sum_probs=197.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-------------hhhHHHHHHHHHHHHhccccceeEEEEEec
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-------------QGYKQFQAEVELLIRAHHKNLTILVGYCDE 627 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-------------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~ 627 (870)
+.+.+.||+|+||.||+|... ++.||+|++..... ...+.+.+|+.++++++||||+++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 344679999999999999986 78899999976432 234678999999999999999999999999
Q ss_pred CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC---cEEEEe
Q 002887 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF---QAKLAD 704 (870)
Q Consensus 628 ~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~---~vkL~D 704 (870)
....++||||+++|+|.+.+... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|
T Consensus 118 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 118 KKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 99999999999999999988643 4699999999999999999999998 999999999999998876 699999
Q ss_pred ccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC
Q 002887 705 FGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD 784 (870)
Q Consensus 705 FGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~ 784 (870)
||+++..... .......||+.|+|||++. +.++.++||||+||++|+|++|++||........+... ..+.
T Consensus 193 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i-----~~~~ 263 (504)
T 3q5i_A 193 FGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV-----EKGK 263 (504)
T ss_dssp CTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-----HHCC
T ss_pred CCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----HcCC
Confidence 9999876332 2234567999999999986 46899999999999999999999999876544332221 1121
Q ss_pred cchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 785 IKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 785 ~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. .+... .......+.+++.+|++.+|++|||+.|+++
T Consensus 264 ~~--~~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 264 YY--FDFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CC--CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC--CCccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 10 00000 0122456889999999999999999999985
No 222
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=4.1e-35 Score=330.54 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=201.2
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cc-----cceeEEEEEecCCeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HK-----NLTILVGYCDEGANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~-----nIv~l~g~~~~~~~~~LV~ 635 (870)
.+.+.||+|+||.||+|+.. ++.||||++.... ....++..|+.++..++ |+ +++++++++......++||
T Consensus 57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~ 135 (382)
T 2vx3_A 57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVF 135 (382)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEE
T ss_pred EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEE
Confidence 34579999999999999976 7899999997543 34567788999999885 44 4999999999999999999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc--CCCcEEEEeccCCccccC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN--EKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~~vkL~DFGla~~~~~ 713 (870)
||+. |+|.+++.......+++..+..++.|++.||.|||++ ..+|+||||||+|||++ .++.+||+|||+++....
T Consensus 136 e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 136 EMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp ECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred ecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 9997 5999999776656799999999999999999999953 33899999999999995 477899999999986532
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc--------CCc
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR--------GDI 785 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~--------~~~ 785 (870)
......||+.|+|||++.+..++.++|||||||++|||++|++||........+.......-.. ...
T Consensus 214 -----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (382)
T 2vx3_A 214 -----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKA 288 (382)
T ss_dssp -----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTH
T ss_pred -----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHH
Confidence 1234678999999999999999999999999999999999999998766544444433221100 000
Q ss_pred chhcccc----c-----------------------------------C--CCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 002887 786 KNIVDHR----L-----------------------------------Q--GDFDTNTVWKAVEIALACIHTISTRRPTMN 824 (870)
Q Consensus 786 ~~i~d~~----l-----------------------------------~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~ 824 (870)
.+.++.. + . ......+...+.+++.+||+.||++|||+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~ 368 (382)
T 2vx3_A 289 RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPY 368 (382)
T ss_dssp HHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHH
T ss_pred HHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHH
Confidence 0000000 0 0 001123446789999999999999999999
Q ss_pred HHHH
Q 002887 825 QVVI 828 (870)
Q Consensus 825 eVl~ 828 (870)
|+++
T Consensus 369 e~L~ 372 (382)
T 2vx3_A 369 YALQ 372 (382)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.6e-35 Score=327.89 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=200.2
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecC-----CeEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEG-----ANMGLI 634 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~LV 634 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ....+.+.+|++++.+++||||+++++++... ...++|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 344579999999999999975 8889999997543 33446789999999999999999999999654 468999
Q ss_pred EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887 635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE 714 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~ 714 (870)
|||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 109 ~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 109 QDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99998 589888853 4689999999999999999999998 9999999999999999999999999999866322
Q ss_pred CCc-cccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcch-----
Q 002887 715 GGT-HVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKN----- 787 (870)
Q Consensus 715 ~~~-~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~----- 787 (870)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|++||........+.......-. .....
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 260 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS-PSQEDLNCII 260 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCS-CCHHHHHTCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCC-CCHHHHHHhh
Confidence 111 11244579999999998764 45899999999999999999999999877665555443321111 00000
Q ss_pred ------hccccc-CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 788 ------IVDHRL-QGDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 788 ------i~d~~l-~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...... ..... ......+.+++.+|++.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000 00000 122356889999999999999999999986
No 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2e-35 Score=338.66 Aligned_cols=195 Identities=27% Similarity=0.388 Sum_probs=162.5
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecC-----CeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG-----ANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~L 633 (870)
+.+.+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++|+||+++++++... ...++
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 345689999999999999986 789999999764 334457789999999999999999999999765 57899
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+. |+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 108 v~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 999987 599998853 35699999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCc--------------------cccccccCCCCccCcccc-ccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002887 714 EGGT--------------------HVSTTVVGTPGYLDPEYY-ISNRLTEKSDVYSFGVVLLELITGQPVI 763 (870)
Q Consensus 714 ~~~~--------------------~~~~~~~gt~~y~APE~~-~~~~~~~ksDVwS~GvvL~elltG~~p~ 763 (870)
.... .......||+.|+|||++ ....++.++||||+||++|||++|..||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 2211 123556899999999986 4566999999999999999999855444
No 225
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.5e-36 Score=333.53 Aligned_cols=255 Identities=21% Similarity=0.271 Sum_probs=190.5
Q ss_pred ccccccccCcEEEEEEEEC-CeeEEEEEeeccchh-----------hhHHHHHHHHHHHHhccccceeEEEEEe-----c
Q 002887 565 FERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQ-----------GYKQFQAEVELLIRAHHKNLTILVGYCD-----E 627 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~-----------~~~~f~~Ei~~l~~l~H~nIv~l~g~~~-----~ 627 (870)
+.+.||+|+||.||+|... ++.||||++...... ..+.+.+|++++++++||||+++++++. .
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (362)
T 3pg1_A 26 VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPA 105 (362)
T ss_dssp EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTT
T ss_pred EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCC
Confidence 3579999999999999876 889999998653221 2367899999999999999999999984 3
Q ss_pred CCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccC
Q 002887 628 GANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL 707 (870)
Q Consensus 628 ~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGl 707 (870)
....++||||++ |+|.+.+... ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 180 (362)
T 3pg1_A 106 MHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNL 180 (362)
T ss_dssp CCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCTTC
T ss_pred cceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEecCc
Confidence 346899999998 6888877643 35799999999999999999999999 999999999999999999999999999
Q ss_pred CccccCCCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcc
Q 002887 708 SRIFPVEGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIK 786 (870)
Q Consensus 708 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~ 786 (870)
++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........+.......- .....
T Consensus 181 ~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~ 256 (362)
T 3pg1_A 181 AREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVG-TPKIE 256 (362)
T ss_dssp ------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHH
T ss_pred ccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCChH
Confidence 9754222 22344578999999999987 6789999999999999999999999987664444333322111 11000
Q ss_pred -----------hhcccccCCC-------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 787 -----------NIVDHRLQGD-------FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 787 -----------~i~d~~l~~~-------~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
+.+...+... ........+.+++.+|++.+|++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0010111000 01122456889999999999999999999986
No 226
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=334.48 Aligned_cols=257 Identities=23% Similarity=0.313 Sum_probs=180.9
Q ss_pred cccccccCcEEEEEEEEC----CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEe--cCCeEEEEEEEcc
Q 002887 566 ERVLGKGGFGTVYHGYLD----DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD--EGANMGLIYEFMA 639 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~--~~~~~~LV~Ey~~ 639 (870)
.++||+|+||.||+|+.. ++.||||++..... ...+.+|++++++++||||+++++++. .....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 458999999999999964 67899999975532 356889999999999999999999994 4678999999997
Q ss_pred CCchhhhhhhcc-------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE----cCCCcEEEEeccCC
Q 002887 640 NGNLQAHLLEDK-------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL----NEKFQAKLADFGLS 708 (870)
Q Consensus 640 ~gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl----d~~~~vkL~DFGla 708 (870)
+ +|.+.+.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp E-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred C-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 5 7777775332 12499999999999999999999998 99999999999999 77889999999999
Q ss_pred ccccCCCC-ccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCcc---------chHHHHHH
Q 002887 709 RIFPVEGG-THVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQR---------TLIGQWVS 777 (870)
Q Consensus 709 ~~~~~~~~-~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~---------~~l~~~~~ 777 (870)
+.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|++||...... ..+...+.
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 87643211 1223456799999999999874 5899999999999999999999999754421 22222221
Q ss_pred HHhhc--CCcchhc------------ccccCCCCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 778 SMLAR--GDIKNIV------------DHRLQGDFD---------TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 778 ~~~~~--~~~~~i~------------d~~l~~~~~---------~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..-.. ..+..+. ......... ......+.+|+.+||+.||++|||+.|+++
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11100 0000000 000000000 011346789999999999999999999986
No 227
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.1e-35 Score=329.33 Aligned_cols=257 Identities=20% Similarity=0.279 Sum_probs=186.5
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCe-------EEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN-------MGLI 634 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~-------~~LV 634 (870)
.+.+.||+|+||.||+|+.. ++.||||++.... .....+.+|++.+..++||||+++++++..... .++|
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv 104 (360)
T 3e3p_A 26 QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104 (360)
T ss_dssp EEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEE
Confidence 34579999999999999986 8899999986543 233456788889999999999999999965333 7899
Q ss_pred EEEccCCchhhhhhh--cccccccHHHHHHHHHHHHHHHHHHH--hCCCCCceeCCCCCCCEEEcC-CCcEEEEeccCCc
Q 002887 635 YEFMANGNLQAHLLE--DKADTLCWERRLQIASESAQGLEYLH--NGCKPPIVHRDVKSANILLNE-KFQAKLADFGLSR 709 (870)
Q Consensus 635 ~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~aL~yLH--~~~~~~IvHrDLKp~NILld~-~~~vkL~DFGla~ 709 (870)
|||++++ |...+.. .....+++..+..++.|++.||.||| +. +|+||||||+|||++. ++.+||+|||+++
T Consensus 105 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 105 MEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp EECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred eeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 9999974 4443332 23457889999999999999999999 76 9999999999999997 8999999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC-----
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG----- 783 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~----- 783 (870)
..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........+..+....-...
T Consensus 181 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (360)
T 3e3p_A 181 KLSPS---EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLR 257 (360)
T ss_dssp CCCTT---SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred ecCCC---CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHH
Confidence 76432 2223457899999999997654 89999999999999999999999988765555444433211100
Q ss_pred ------Ccchhcc------cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 784 ------DIKNIVD------HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 784 ------~~~~i~d------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
......+ ..............+.+++.+||+.||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 258 KLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000 00011112234678999999999999999999999986
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-35 Score=332.94 Aligned_cols=254 Identities=25% Similarity=0.339 Sum_probs=182.4
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecC------CeEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEG------ANMGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~------~~~~L 633 (870)
.+.+.||+|+||.||+|... ++.||||++... .....+.+.+|++++++++||||+++++++... ...++
T Consensus 32 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~l 111 (367)
T 2fst_X 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL 111 (367)
T ss_dssp EEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred EEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEE
Confidence 34578999999999999875 889999998754 233456788999999999999999999998654 56799
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
|+|++ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 112 v~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 112 VTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp EEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred Eeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 99999 6899988853 5699999999999999999999998 999999999999999999999999999986422
Q ss_pred CCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC-----C---
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG-----D--- 784 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~-----~--- 784 (870)
......||+.|+|||++.+ ..++.++|||||||+++||++|+.||.+......+.......-... .
T Consensus 185 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~ 259 (367)
T 2fst_X 185 -----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCC
T ss_pred -----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 1234679999999999987 6789999999999999999999999987665444433332111000 0
Q ss_pred --cchhcccccC-CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 785 --IKNIVDHRLQ-GDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 785 --~~~i~d~~l~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
....+..... .... ......+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000000 0001 1123568899999999999999999999863
No 229
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.7e-35 Score=327.65 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=193.9
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHH-HHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVEL-LIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~-l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.||+|+||.||+|... ++.||||++.... .....++..|..+ ++.++||||+++++++......++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 3578999999999999984 8999999997653 2334455566655 6778999999999999999999999999985
Q ss_pred Cchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 641 GNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 641 gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
+|.+++... ....+++..+..++.|++.||+|||++ .+|+||||||+|||++.++.+||+|||+++.... ..
T Consensus 135 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~---~~ 208 (340)
T 3an0_A 135 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD---SV 208 (340)
T ss_dssp -EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC---HH
T ss_pred -cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceeccc---cc
Confidence 898887642 346799999999999999999999974 2899999999999999999999999999986521 22
Q ss_pred ccccccCCCCccCcccccc----CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 719 VSTTVVGTPGYLDPEYYIS----NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~----~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ............
T Consensus 209 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~--------- 276 (340)
T 3an0_A 209 AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF---QQLKQVVEEPSP--------- 276 (340)
T ss_dssp HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH---HHHHHHHHSCCC---------
T ss_pred ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH---HHHHHHhcCCCC---------
Confidence 2334579999999999743 468999999999999999999999997643221 111122211110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..........+.+++.+||+.+|++||++.|+++
T Consensus 277 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 277 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0011223567889999999999999999999986
No 230
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.8e-35 Score=323.23 Aligned_cols=256 Identities=20% Similarity=0.283 Sum_probs=201.1
Q ss_pred hhccccccccCcEEEEEEEEC--C-eeEEEEEeeccchhhhHHHHHHHHHHHHhcccc------ceeEEEEEecCCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--D-KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN------LTILVGYCDEGANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~-~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n------Iv~l~g~~~~~~~~~L 633 (870)
+.+.+.||+|+||.||+|... + +.||+|++.... ...+.+.+|++++++++|++ ++.+.+++......++
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 99 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI 99 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEE
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEE
Confidence 445689999999999999975 3 789999997543 34567889999999998877 8999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE-------------------
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL------------------- 694 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl------------------- 694 (870)
||||+ ++++.+.+.......+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 100 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 100 AFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccccc
Confidence 99999 56777777666556799999999999999999999998 99999999999999
Q ss_pred cCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHH
Q 002887 695 NEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQ 774 (870)
Q Consensus 695 d~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~ 774 (870)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........+..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250 (355)
T ss_dssp ESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred cCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 67889999999999864221 2345799999999999999999999999999999999999999987654433322
Q ss_pred HHHHHh-------hcCCcchhc-ccc---------------------cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 002887 775 WVSSML-------ARGDIKNIV-DHR---------------------LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQ 825 (870)
Q Consensus 775 ~~~~~~-------~~~~~~~i~-d~~---------------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~e 825 (870)
.....- ......... ... ............+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e 330 (355)
T 2eu9_A 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE 330 (355)
T ss_dssp HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence 211110 000000000 000 000112344668899999999999999999999
Q ss_pred HHH
Q 002887 826 VVI 828 (870)
Q Consensus 826 Vl~ 828 (870)
+++
T Consensus 331 ~l~ 333 (355)
T 2eu9_A 331 ALL 333 (355)
T ss_dssp HTT
T ss_pred Hhc
Confidence 985
No 231
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=331.02 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=197.9
Q ss_pred hccccccccCcEEEEEEEECCeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
.+.+.||+|+||.||+|...+ .+|+|++.... ....+.+.+|+.++++++|+||+++++++......++||||++++
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 346799999999999999876 59999987543 233466889999999999999999999999999999999999999
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC---Ccc
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG---GTH 718 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~---~~~ 718 (870)
+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++...... ...
T Consensus 115 ~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~ 189 (319)
T 2y4i_B 115 TLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRED 189 (319)
T ss_dssp EHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CC
T ss_pred cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccccccc
Confidence 999998653 34689999999999999999999998 999999999999998 6799999999987543211 112
Q ss_pred ccccccCCCCccCcccccc---------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 719 VSTTVVGTPGYLDPEYYIS---------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~~---------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
......|++.|+|||.+.. ..++.++||||||+++|||++|+.||..........+ ...+......
T Consensus 190 ~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~ 264 (319)
T 2y4i_B 190 KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ-----MGTGMKPNLS 264 (319)
T ss_dssp SCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH-----HHTTCCCCCC
T ss_pred ccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----hccCCCCCCC
Confidence 2234468899999999874 3578899999999999999999999986554332221 1111111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM 836 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~ 836 (870)
.......+.+++.+|++.+|++|||+.|++++|+++...
T Consensus 265 --------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 265 --------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp --------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred --------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 111234578999999999999999999999999987644
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.5e-35 Score=318.34 Aligned_cols=247 Identities=23% Similarity=0.336 Sum_probs=190.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec-------------C
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE-------------G 628 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-------------~ 628 (870)
.+.+.||+|+||.||+|+.. ++.||||++... ....+.+.+|++++++++||||+++++++.+ .
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 45679999999999999975 889999999654 3445778999999999999999999998854 3
Q ss_pred CeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCC
Q 002887 629 ANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLS 708 (870)
Q Consensus 629 ~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla 708 (870)
...++||||+++|+|.+++... ...+++..++.++.|+++||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred CceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 5688999999999999998653 35678899999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCC------------ccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHH
Q 002887 709 RIFPVEGG------------THVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 709 ~~~~~~~~------------~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~ 775 (870)
........ ........|++.|+|||++.+. .++.++|||||||++|||++ ||...... ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~---~~~ 237 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER---VNI 237 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH---HHH
Confidence 86532110 1122345689999999999864 68999999999999999998 44322111 111
Q ss_pred HHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 776 VSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..... .. ...+...........+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~-~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 238 LKKLR-SV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHH-ST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHhcc-cc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11111 11 111222333445567889999999999999999999986
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2e-35 Score=328.61 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=196.9
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecC-----CeEEEEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEG-----ANMGLIY 635 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~-----~~~~LV~ 635 (870)
.+.+.||+|+||.||+|... ++.||||++.... ......+.+|++++++++||||+++++++... ...++||
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~ 93 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQ 93 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEE
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEE
Confidence 34578999999999999986 8899999997543 33456788999999999999999999998654 6789999
Q ss_pred EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887 636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG 715 (870)
Q Consensus 636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~ 715 (870)
||+. |+|.+++.. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 94 ELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp CCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred eccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 9998 589888854 4689999999999999999999998 99999999999999999999999999998764221
Q ss_pred Ccc--------ccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC---
Q 002887 716 GTH--------VSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--- 783 (870)
Q Consensus 716 ~~~--------~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--- 783 (870)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|++||........+.......-...
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 246 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246 (353)
T ss_dssp -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTT
T ss_pred ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhc
Confidence 111 1223578999999998765 6789999999999999999999999987664433332221111000
Q ss_pred Ccc--------hhcccccC-CCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 784 DIK--------NIVDHRLQ-GDF-----DTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 784 ~~~--------~i~d~~l~-~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
... +.+..... ... .......+.+++.+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 00000000 000 0123457789999999999999999999986
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-34 Score=325.63 Aligned_cols=253 Identities=24% Similarity=0.307 Sum_probs=195.0
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeE------EE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANM------GL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~------~L 633 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++...... ++
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 124 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEE
Confidence 34578999999999999975 8999999997643 23356789999999999999999999999877654 99
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+. ++|.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 125 v~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 125 VMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp EEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred EEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 999998 57877663 3489999999999999999999998 999999999999999999999999999986522
Q ss_pred CCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC-----c--
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD-----I-- 785 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~-----~-- 785 (870)
......||+.|+|||++.+ ..++.++|||||||+++||++|+.||........+.+.....-.... +
T Consensus 197 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 271 (371)
T 4exu_A 197 -----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271 (371)
T ss_dssp --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSC
T ss_pred -----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhh
Confidence 2234578999999999987 67899999999999999999999999876654444333221110000 0
Q ss_pred ---chhcccccCCCC------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887 786 ---KNIVDHRLQGDF------DTNTVWKAVEIALACIHTISTRRPTMNQVVIE 829 (870)
Q Consensus 786 ---~~i~d~~l~~~~------~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~ 829 (870)
............ .......+.+++.+|++.||++|||+.|+++.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000 01224678899999999999999999999863
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.1e-35 Score=325.68 Aligned_cols=245 Identities=22% Similarity=0.302 Sum_probs=169.8
Q ss_pred cccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec----CCeEEEEEEEcc
Q 002887 566 ERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE----GANMGLIYEFMA 639 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~LV~Ey~~ 639 (870)
.+.||+|+||.||+|... ++.||||++.... ....+....+..++|+||+++++++.. +...++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 357999999999999986 8899999997542 122223344566799999999999866 445899999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~ 716 (870)
+|+|.+++.+.....+++.++..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||+++....
T Consensus 110 gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~--- 183 (336)
T 3fhr_A 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ--- 183 (336)
T ss_dssp TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceeccc---
Confidence 99999999876666899999999999999999999999 9999999999999986 45599999999986532
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||............... ...+. ......
T Consensus 184 -~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~------~~~~~~ 255 (336)
T 3fhr_A 184 -NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRR-IRLGQ------YGFPNP 255 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTT
T ss_pred -cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHh-hhccc------cccCch
Confidence 1223457899999999998888999999999999999999999999765432221111100 00000 001111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
........+.+++.+|++.+|++|||+.|+++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11234567889999999999999999999987
No 236
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.3e-35 Score=326.93 Aligned_cols=257 Identities=22% Similarity=0.334 Sum_probs=197.7
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-----------cccceeEEEEEecCC
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-----------HKNLTILVGYCDEGA 629 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-----------H~nIv~l~g~~~~~~ 629 (870)
+.+.+.||+|+||.||+|+.. ++.||||++.... ...+.+.+|++++++++ |+||+++++++....
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 445689999999999999974 8899999997543 34467889999999886 899999999987644
Q ss_pred ----eEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc------CCCc
Q 002887 630 ----NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN------EKFQ 699 (870)
Q Consensus 630 ----~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld------~~~~ 699 (870)
..++||||+ +++|.+++.......+++..+..++.|++.||+|||+++ +|+||||||+|||++ ..+.
T Consensus 100 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 100 PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCcce
Confidence 789999999 899999998766667999999999999999999999853 899999999999994 4458
Q ss_pred EEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc------chHH
Q 002887 700 AKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR------TLIG 773 (870)
Q Consensus 700 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~------~~l~ 773 (870)
+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.
T Consensus 177 ~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 177 IKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp EEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred EEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 999999999865321 23457899999999999999999999999999999999999999864421 1111
Q ss_pred HHHHHH-------hhcCCcc-hhccc-------------------ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 002887 774 QWVSSM-------LARGDIK-NIVDH-------------------RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV 826 (870)
Q Consensus 774 ~~~~~~-------~~~~~~~-~i~d~-------------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eV 826 (870)
+..... ...+... ..++. .-....+......+.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 111100 0000000 00000 00112345677889999999999999999999999
Q ss_pred HH
Q 002887 827 VI 828 (870)
Q Consensus 827 l~ 828 (870)
++
T Consensus 332 l~ 333 (373)
T 1q8y_A 332 VN 333 (373)
T ss_dssp HT
T ss_pred hh
Confidence 86
No 237
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.2e-35 Score=315.90 Aligned_cols=247 Identities=27% Similarity=0.393 Sum_probs=199.3
Q ss_pred HhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.+.+.||+|+||.||+|+.. ++.||+|++..... ...+.+.+|++++++++||||+++++++......++|+||
T Consensus 23 ~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 102 (287)
T 2wei_A 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGEL 102 (287)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEc
Confidence 4456789999999999999985 88999999976432 3456789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC---CcEEEEeccCCccccCC
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK---FQAKLADFGLSRIFPVE 714 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~---~~vkL~DFGla~~~~~~ 714 (870)
+++++|.+.+... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.+ +.+||+|||++......
T Consensus 103 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 103 YTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999988643 4689999999999999999999998 99999999999999764 46999999999865322
Q ss_pred CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887 715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ 794 (870)
Q Consensus 715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~ 794 (870)
. ......|++.|+|||.+.+ .++.++||||||+++++|++|+.||........... +..+...... +.
T Consensus 178 ~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~-~~-- 245 (287)
T 2wei_A 178 T---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKR-----VETGKYAFDL-PQ-- 245 (287)
T ss_dssp S---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHCCCCCCS-GG--
T ss_pred C---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHcCCCCCCc-hh--
Confidence 1 1233457889999999865 489999999999999999999999986554332222 1122111000 00
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.......+.+++.+|++.+|++|||+.|+++
T Consensus 246 ---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 246 ---WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp ---GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0123456889999999999999999999987
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=322.27 Aligned_cols=252 Identities=24% Similarity=0.315 Sum_probs=194.6
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCe------EEE
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN------MGL 633 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~------~~L 633 (870)
.+.+.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++||||+++++++..... .++
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l 106 (353)
T 3coi_A 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 106 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEE
T ss_pred EEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEE
Confidence 34578999999999999985 8999999997642 2335678999999999999999999999977654 499
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+. |+|.+.+. ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++....
T Consensus 107 v~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 107 VMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp EEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred Eecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 999998 58887763 3489999999999999999999998 999999999999999999999999999976421
Q ss_pred CCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC-----Cc--
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG-----DI-- 785 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~-----~~-- 785 (870)
......||+.|+|||++.+ ..++.++|||||||+++||++|+.||........+.......-... .+
T Consensus 179 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 179 -----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred -----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence 1234578999999999987 6789999999999999999999999987654433333222110000 00
Q ss_pred ---chhc---ccccC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 ---KNIV---DHRLQ---GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ---~~i~---d~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...+ ..... ..........+.+++.+|++.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00000 0112234567899999999999999999999985
No 239
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-35 Score=318.49 Aligned_cols=238 Identities=24% Similarity=0.395 Sum_probs=190.3
Q ss_pred HHhhccccccccCcEEEEEEEEC--CeeEEEEEeeccch------hhhHHHHHHHHHHHHh----ccccceeEEEEEecC
Q 002887 561 ITNNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV------QGYKQFQAEVELLIRA----HHKNLTILVGYCDEG 628 (870)
Q Consensus 561 ~t~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~------~~~~~f~~Ei~~l~~l----~H~nIv~l~g~~~~~ 628 (870)
..+.+.+.||+|+||.||+|+.. ++.||||++..... .....+.+|+.++.++ +|+||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 34556789999999999999874 78999999976533 2234567899999999 899999999999999
Q ss_pred CeEEEEEEE-ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc-CCCcEEEEecc
Q 002887 629 ANMGLIYEF-MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFG 706 (870)
Q Consensus 629 ~~~~LV~Ey-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~vkL~DFG 706 (870)
+..++|+|| +.+++|.+++.+. ..+++..++.++.|+++||+|||+. +|+||||||+||+++ +++.+||+|||
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred CeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 999999999 7899999998753 4689999999999999999999998 999999999999999 88999999999
Q ss_pred CCccccCCCCccccccccCCCCccCccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887 707 LSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLT-EKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI 785 (870)
Q Consensus 707 la~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~-~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~ 785 (870)
+++..... ......|+..|+|||++.+..+. .++||||||+++|||++|+.||.... +. .. .
T Consensus 186 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~----~~-~-- 248 (312)
T 2iwi_A 186 SGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EI----LE-A-- 248 (312)
T ss_dssp SCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH----HH-T--
T ss_pred hhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HH----hh-h--
Confidence 99876322 22345689999999999876654 58999999999999999999996421 10 10 1
Q ss_pred chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ..........+.+++.+|++.+|++|||+.|+++
T Consensus 249 ------~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 ------E--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ------C--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ------c--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0112233456789999999999999999999986
No 240
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=315.16 Aligned_cols=246 Identities=22% Similarity=0.266 Sum_probs=176.1
Q ss_pred hccccccccCcEEEEEEEEC--CeeEEEEEeeccchh--hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887 564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ--GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA 639 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~--~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~ 639 (870)
.+.+.||+|+||.||+|... ++.||||++...... ..+.+.++..+++.++||||+++++++.+....++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 34578999999999999985 889999999765322 2233455556778889999999999999999999999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHh-CCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH 718 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~ 718 (870)
++.+ ..+.......+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+|||++...... .
T Consensus 107 ~~~~-~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~ 179 (318)
T 2dyl_A 107 GTCA-EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD---K 179 (318)
T ss_dssp SEEH-HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CCcH-HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC---c
Confidence 3444 44444445679999999999999999999998 4 8999999999999999999999999999765322 2
Q ss_pred ccccccCCCCccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 719 VSTTVVGTPGYLDPEYYI-----SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 719 ~~~~~~gt~~y~APE~~~-----~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
......|++.|+|||++. ...++.++||||||+++|||++|+.||........ .......... . .+
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~~~-~-----~~ 250 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE---VLTKVLQEEP-P-----LL 250 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHHSCC-C-----CC
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH---HHHHHhccCC-C-----CC
Confidence 223457899999999994 45688999999999999999999999986432211 1122221111 0 01
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
. ........+.+++.+|++.+|++||++.|+++
T Consensus 251 ~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 P--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp C--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 01123456889999999999999999999986
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.6e-34 Score=318.21 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=174.7
Q ss_pred ccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHH-HHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887 565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVE-LLIRAHHKNLTILVGYCDEGANMGLIYEFMAN 640 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~-~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~ 640 (870)
+.+.||+|+||.||+|... ++.||||++.... .....++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 3478999999999999986 8999999997653 233445566665 66678999999999999999999999999985
Q ss_pred Cchhhhhhh---cccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 641 GNLQAHLLE---DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 641 gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+|.+++.. .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--- 179 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS--- 179 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecccc---
Confidence 77776653 2246789999999999999999999984 28999999999999999999999999999865322
Q ss_pred cccccccCCCCccCcccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 718 HVSTTVVGTPGYLDPEYY----ISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~----~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
.......||+.|+|||++ .+..++.++||||||+++|||++|+.||........ ...... .+ ..+.+
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~-~~-----~~~~~ 250 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD---QLTQVV-KG-----DPPQL 250 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCC-CS-----CCCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---HHHHHh-cC-----CCCCC
Confidence 122334799999999998 456789999999999999999999999975432110 000000 01 01111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
...........+.+++.+|++.+|++||++.|+++
T Consensus 251 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11112234567889999999999999999999976
No 242
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.1e-35 Score=320.43 Aligned_cols=236 Identities=24% Similarity=0.381 Sum_probs=194.9
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchh------hhHHHHHHHHHHHHhc--cccceeEEEEEecCCeEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ------GYKQFQAEVELLIRAH--HKNLTILVGYCDEGANMG 632 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~------~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~ 632 (870)
+.+.+.||+|+||.||+|+.. ++.||||++...... ..+.+.+|+.++++++ |+||+++++++......+
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~ 124 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV 124 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEE
Confidence 345689999999999999874 889999999765332 2356788999999996 599999999999999999
Q ss_pred EEEEEccC-CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc-CCCcEEEEeccCCcc
Q 002887 633 LIYEFMAN-GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRI 710 (870)
Q Consensus 633 LV~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~vkL~DFGla~~ 710 (870)
+|+|++.+ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+++.
T Consensus 125 lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~ 199 (320)
T 3a99_A 125 LILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL 199 (320)
T ss_dssp EEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccccc
Confidence 99999986 8999988653 4689999999999999999999998 999999999999999 789999999999987
Q ss_pred ccCCCCccccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
.... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .. .. +..
T Consensus 200 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~----~~-~~~---- 260 (320)
T 3a99_A 200 LKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EI----IR-GQV---- 260 (320)
T ss_dssp CCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HH----HH-CCC----
T ss_pred cccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hh----hc-ccc----
Confidence 6321 2234579999999999987665 688999999999999999999996421 10 11 100
Q ss_pred ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.........+.+++.+||+.+|++|||+.|+++
T Consensus 261 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011223456889999999999999999999986
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.4e-34 Score=329.91 Aligned_cols=246 Identities=23% Similarity=0.327 Sum_probs=184.4
Q ss_pred cccccccCcEEEEEE-EECCeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 566 ERVLGKGGFGTVYHG-YLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~-~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
.+.||+|+||+||.+ ...++.||||++.... .+.+.+|++++.++ +||||+++++++.+....++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 468999999999654 4559999999987542 34678999999987 89999999999999999999999996 699
Q ss_pred hhhhhhccccc-----ccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC-------------CcEEEEec
Q 002887 644 QAHLLEDKADT-----LCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK-------------FQAKLADF 705 (870)
Q Consensus 644 ~~~l~~~~~~~-----l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~-------------~~vkL~DF 705 (870)
.+++....... .++..++.++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99987543211 13345678999999999999998 99999999999999754 48999999
Q ss_pred cCCccccCCCCcc--ccccccCCCCccCcccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHH
Q 002887 706 GLSRIFPVEGGTH--VSTTVVGTPGYLDPEYYIS-------NRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQW 775 (870)
Q Consensus 706 Gla~~~~~~~~~~--~~~~~~gt~~y~APE~~~~-------~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~ 775 (870)
|+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....... ..+
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNI 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHH
Confidence 9998764332211 1234579999999999975 568999999999999999999 999997543321 111
Q ss_pred HHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 776 VSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 776 ~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
....... +.+...........+.+++.+|++.+|++|||+.||++
T Consensus 251 ~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 251 IRGIFSL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHTCCCC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hcCCCCc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111100 11111223456778999999999999999999999985
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-34 Score=326.12 Aligned_cols=245 Identities=27% Similarity=0.366 Sum_probs=184.4
Q ss_pred hccccccccCcEE-EEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEEccCC
Q 002887 564 NFERVLGKGGFGT-VYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEFMANG 641 (870)
Q Consensus 564 ~f~~~LG~G~fG~-Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey~~~g 641 (870)
...+.||+|+||. ||++..+++.||||++.... ...+.+|+++++++ +||||+++++++.+....++||||+. |
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 3457899999998 55666679999999996543 23467899999999 89999999999999999999999997 5
Q ss_pred chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-----CCcEEEEeccCCccccCCCC
Q 002887 642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-----KFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-----~~~vkL~DFGla~~~~~~~~ 716 (870)
+|.+++.... ..+.+..+..++.|+++||+|||+. +|+||||||+|||++. ...+||+|||+++.......
T Consensus 103 ~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 103 TLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp EHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 9999886543 2344556678999999999999998 9999999999999953 33688999999987643221
Q ss_pred c-cccccccCCCCccCccccc---cCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhccc
Q 002887 717 T-HVSTTVVGTPGYLDPEYYI---SNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDH 791 (870)
Q Consensus 717 ~-~~~~~~~gt~~y~APE~~~---~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~ 791 (870)
. .......||+.|+|||++. ...++.++|||||||++|||++ |+.||........ ......... ..
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-----~~~~~~~~~-~~--- 249 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-----NILLGACSL-DC--- 249 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-----HHHTTCCCC-TT---
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-----HHHhccCCc-cc---
Confidence 1 2234567999999999997 4567889999999999999999 9999965432211 111111110 00
Q ss_pred ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 792 RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 792 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
..........+.+++.+|++.||++|||+.||++
T Consensus 250 ---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 250 ---LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0112244556789999999999999999999984
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.7e-34 Score=337.98 Aligned_cols=266 Identities=25% Similarity=0.301 Sum_probs=205.3
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEec------CCeEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDE------GANMGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~L 633 (870)
+.+.+.||+|+||.||+|... ++.||||++... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 16 Y~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~L 95 (676)
T 3qa8_A 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLL 95 (676)
T ss_dssp -CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCC
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEE
Confidence 456689999999999999974 889999998764 33456778999999999999999999999865 677899
Q ss_pred EEEEccCCchhhhhhhcc-cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCc---EEEEeccCCc
Q 002887 634 IYEFMANGNLQAHLLEDK-ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQ---AKLADFGLSR 709 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~---vkL~DFGla~ 709 (870)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.
T Consensus 96 VmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 96 AMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp EEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 999999999999987543 23689999999999999999999998 9999999999999997765 9999999998
Q ss_pred cccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887 710 IFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV 789 (870)
Q Consensus 710 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~ 789 (870)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...|.......+......
T Consensus 173 ~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~---~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 173 ELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ---PVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp BTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH---HHHSSTTCC------CCS
T ss_pred ccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc---hhhhhhhhhcccchhhhh
Confidence 76332 223456799999999999999999999999999999999999999975432 112211111111000000
Q ss_pred c----------cc--cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHHhhhHh
Q 002887 790 D----------HR--LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQ-----VVIELNDCLAME 837 (870)
Q Consensus 790 d----------~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~e-----Vl~~L~~~~~~e 837 (870)
. .. ............+.+++.+|++.||++|||+.| ..+.+++++...
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 0 00 011233456788999999999999999999988 567777776654
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4e-33 Score=301.75 Aligned_cols=228 Identities=12% Similarity=0.096 Sum_probs=180.8
Q ss_pred hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
+.+.+.||+|+||.||+|+.. ++.||||++..... ...+.+.+|+.++.+++||||+++++++.+.+..++||||
T Consensus 33 y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 112 (286)
T 3uqc_A 33 YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEW 112 (286)
T ss_dssp EEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEe
Confidence 445689999999999999986 89999999976532 3347789999999999999999999999999999999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++++|.+++... ....++.+|+.|++.||+|||++ +|+||||||+|||+++++.+||+++|
T Consensus 113 ~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 113 IRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp CCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred cCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 9999999998432 34557889999999999999999 99999999999999999999998543
Q ss_pred cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC--C
Q 002887 718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ--G 795 (870)
Q Consensus 718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~--~ 795 (870)
|++ .++.++|||||||++|||++|+.||........+.. .......... .
T Consensus 175 -----------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~----------~~~~~~~~~~~~~ 226 (286)
T 3uqc_A 175 -----------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP----------AERDTAGQPIEPA 226 (286)
T ss_dssp -----------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE----------CCBCTTSCBCCHH
T ss_pred -----------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH----------HHHHhccCCCChh
Confidence 233 268899999999999999999999986543221100 0000000000 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887 796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME 837 (870)
Q Consensus 796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e 837 (870)
.........+.+++.+||+.||++| |+.|+++.|+++...+
T Consensus 227 ~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 227 DIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred hcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0112234568899999999999999 9999999999976543
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-33 Score=337.63 Aligned_cols=238 Identities=22% Similarity=0.280 Sum_probs=192.1
Q ss_pred hhccccccccCcEEEEEEEEC---CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCe-----EEE
Q 002887 563 NNFERVLGKGGFGTVYHGYLD---DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGAN-----MGL 633 (870)
Q Consensus 563 ~~f~~~LG~G~fG~Vy~~~~~---~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~-----~~L 633 (870)
+.+.+.||+|+||.||+|... ++.||||++.... ......+.+|++++++++||||+++++++..... .++
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l 161 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI 161 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence 445679999999999999974 7899999987543 3445678999999999999999999999987655 799
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||+++++|.+++.. .+++.+++.++.||+.||.|||++ +|+||||||+|||++++ .+||+|||+++....
T Consensus 162 v~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 162 VMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 9999999999987642 699999999999999999999998 99999999999999986 999999999986532
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL 793 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l 793 (870)
. ....||+.|+|||++.++. +.++|||||||+++||++|.+|+........ .
T Consensus 234 ~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------~------- 285 (681)
T 2pzi_A 234 F------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------P------- 285 (681)
T ss_dssp C------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------C-------
T ss_pred C------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--------------c-------
Confidence 2 3457999999999987654 8899999999999999999988764221100 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhhhH
Q 002887 794 QGDFDTNTVWKAVEIALACIHTISTRRP-TMNQVVIELNDCLAM 836 (870)
Q Consensus 794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-sm~eVl~~L~~~~~~ 836 (870)
...........+.+++.+|++.+|++|| ++.++.+.|...+..
T Consensus 286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0000112335688999999999999999 577777778776543
No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1e-32 Score=300.01 Aligned_cols=219 Identities=22% Similarity=0.347 Sum_probs=175.5
Q ss_pred ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHH-HHhccccceeEEEEEec----CCeEEEEEEEcc
Q 002887 567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELL-IRAHHKNLTILVGYCDE----GANMGLIYEFMA 639 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l-~~l~H~nIv~l~g~~~~----~~~~~LV~Ey~~ 639 (870)
+.||+|+||.||++... ++.||+|++... ..+.+|++++ +..+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 67999999999999985 889999998653 4567889888 55699999999999876 677899999999
Q ss_pred CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCC
Q 002887 640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGG 716 (870)
Q Consensus 640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~ 716 (870)
+|+|.+++.......+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---- 171 (299)
T 3m2w_A 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---- 171 (299)
T ss_dssp SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc----
Confidence 99999999876666899999999999999999999998 9999999999999998 7899999999986531
Q ss_pred ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887 717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD 796 (870)
Q Consensus 717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~ 796 (870)
+..++.++|||||||++|||++|+.||......... ......+..... .
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~---------~~~~~~~~~~~~--~ 220 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS---------PGMKTRIRMGQY--E 220 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCC--S
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh---------HHHHHHHhhccc--c
Confidence 234678999999999999999999999754322110 000000100000 1
Q ss_pred CC----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 797 FD----TNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 797 ~~----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
.. ......+.+++.+|++.+|++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11 123567889999999999999999999986
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.98 E-value=1.5e-32 Score=312.96 Aligned_cols=234 Identities=17% Similarity=0.105 Sum_probs=176.2
Q ss_pred cccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhcc-ccc---------e-e---------
Q 002887 566 ERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHH-KNL---------T-I--------- 620 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H-~nI---------v-~--------- 620 (870)
.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+.+++.++| +|. + .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 468999999999999976 89999999884332 236778999999999977 221 1 1
Q ss_pred --EEEEEec-----CCeEEEEEEEccCCchhhhhh-----hcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCC
Q 002887 621 --LVGYCDE-----GANMGLIYEFMANGNLQAHLL-----EDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVK 688 (870)
Q Consensus 621 --l~g~~~~-----~~~~~LV~Ey~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLK 688 (870)
+..++.. ....+++|++ .+++|.+++. ......+++..++.++.|+++||+|||++ +|+|||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDiK 238 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLR 238 (413)
T ss_dssp --------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCCC
T ss_pred CccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcc
Confidence 1111111 1234566664 4689998884 22345789999999999999999999998 99999999
Q ss_pred CCCEEEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCcccc----------ccCCCCccchHHHHHHHHHHHHh
Q 002887 689 SANILLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYY----------ISNRLTEKSDVYSFGVVLLELIT 758 (870)
Q Consensus 689 p~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~----------~~~~~~~ksDVwS~GvvL~ellt 758 (870)
|+|||++.++.+||+|||+++.... ......| +.|+|||++ .+..++.++|||||||++|||++
T Consensus 239 p~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 239 PVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp GGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred cceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999876421 1345567 999999999 55568889999999999999999
Q ss_pred CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887 759 GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI 828 (870)
Q Consensus 759 G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~ 828 (870)
|+.||........ ...++... . ..+..+.+++.+||+.+|++||++.|+++
T Consensus 313 g~~Pf~~~~~~~~-------------~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 313 ADLPNTDDAALGG-------------SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SSCCCCTTGGGSC-------------SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcchhhh-------------HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999976442211 11111110 1 12356889999999999999999888854
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=5.1e-33 Score=307.60 Aligned_cols=240 Identities=15% Similarity=0.149 Sum_probs=183.5
Q ss_pred HhhccccccccCcEEEEEEEECCeeEEEEEeeccch--------hhhHHHHHHHHHHHHhc---------cccceeEEEE
Q 002887 562 TNNFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAH---------HKNLTILVGY 624 (870)
Q Consensus 562 t~~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~---------H~nIv~l~g~ 624 (870)
.+.+.+.||+|+||.||+|+.+++.||||++..... ...+.+.+|+.++++++ |+||+++.+.
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~ 100 (336)
T 2vuw_A 21 KLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSV 100 (336)
T ss_dssp HHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEE
T ss_pred cchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcce
Confidence 345678999999999999999999999999986532 23377899999999986 7777777776
Q ss_pred Ee------------------------------cCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHH
Q 002887 625 CD------------------------------EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYL 674 (870)
Q Consensus 625 ~~------------------------------~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yL 674 (870)
+. .....++||||+++|++.+.+.+ ..+++..+..++.|++.||+||
T Consensus 101 ~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 101 HCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHH
T ss_pred eEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHH
Confidence 42 26789999999999988777743 5689999999999999999999
Q ss_pred H-hCCCCCceeCCCCCCCEEEcCCC--------------------cEEEEeccCCccccCCCCccccccccCCCCccCcc
Q 002887 675 H-NGCKPPIVHRDVKSANILLNEKF--------------------QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPE 733 (870)
Q Consensus 675 H-~~~~~~IvHrDLKp~NILld~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE 733 (870)
| +. +|+||||||+|||++.++ .+||+|||+++.... ....||+.|+|||
T Consensus 178 H~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE 247 (336)
T 2vuw_A 178 EASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDED 247 (336)
T ss_dssp HHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSG
T ss_pred HHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChh
Confidence 9 88 999999999999999887 899999999987632 2347999999999
Q ss_pred ccccCCCCccchHHHHHHH-HHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHc
Q 002887 734 YYISNRLTEKSDVYSFGVV-LLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALAC 812 (870)
Q Consensus 734 ~~~~~~~~~ksDVwS~Gvv-L~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~C 812 (870)
++.+.. +.++||||+|++ .+++++|..||..... .............. ...............+.+++.+|
T Consensus 248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW---LHYLTDKMLKQMTF----KTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH---HHHHHHHHHHTCCC----SSCCCSHHHHHHHHHHHHHHHHG
T ss_pred hhcCCC-ccceehhhhhCCCCcccccccCCCcchhh---hhHHHHhhhhhhcc----CcccchhhhhhcCHHHHHHHHHH
Confidence 998766 899999998777 7778889998842100 00011111111000 00001111235677899999999
Q ss_pred cccCCCCCCCHHHHH
Q 002887 813 IHTISTRRPTMNQVV 827 (870)
Q Consensus 813 l~~dP~~RPsm~eVl 827 (870)
|+.+ |++|++
T Consensus 320 L~~d-----sa~e~l 329 (336)
T 2vuw_A 320 LNFS-----SATDLL 329 (336)
T ss_dssp GGSS-----SHHHHH
T ss_pred hccC-----CHHHHH
Confidence 9976 888887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.3e-27 Score=280.20 Aligned_cols=185 Identities=15% Similarity=0.097 Sum_probs=131.4
Q ss_pred ccccccCcEEEEEEEE--CCeeEEEEEeeccc----------hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887 567 RVLGKGGFGTVYHGYL--DDKQVAVKMLSSSS----------VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL 633 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~--~~~~vAVK~l~~~~----------~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L 633 (870)
...+.|+.|.+..++. .|+.+++|.+.... ....++|.+|+++|+++ .|+||+++++++.++...||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 3467777777776553 48999999997541 23356799999999999 79999999999999999999
Q ss_pred EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887 634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV 713 (870)
Q Consensus 634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~ 713 (870)
||||++|++|.+.|.+. ..++.. +|+.||+.||+|||++ +||||||||+|||+++++++||+|||+|+....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999999754 355543 5899999999999999 999999999999999999999999999987633
Q ss_pred CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 002887 714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPV 762 (870)
Q Consensus 714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p 762 (870)
. .......+||+.|||||++.+ .+..++|+||+|+++++|.++..+
T Consensus 392 ~--~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 D--CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred C--CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 2 223345689999999999875 467789999999998887665433
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=6e-25 Score=258.13 Aligned_cols=184 Identities=15% Similarity=0.194 Sum_probs=147.5
Q ss_pred cccccccCcEEEEEEEECCeeEEEEEeeccch--------hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887 566 ERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSV--------QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF 637 (870)
Q Consensus 566 ~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~--------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey 637 (870)
.+.||+|+||.||+|...++.+++|+...... ...+++.+|++++++++||||+++..++....+.++||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 46899999999999988899999998754321 1235589999999999999999666666677778999999
Q ss_pred ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887 638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT 717 (870)
Q Consensus 638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~ 717 (870)
+++++|.+++.+ +..++.|+++||+|||++ +|+||||||+|||+++ ++||+|||+++........
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~ 485 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDK 485 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccc
Confidence 999999999864 568999999999999998 9999999999999999 9999999999876322111
Q ss_pred c-----ccccccCCCCccCcccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002887 718 H-----VSTTVVGTPGYLDPEYYIS--NRLTEKSDVYSFGVVLLELITGQPVIQ 764 (870)
Q Consensus 718 ~-----~~~~~~gt~~y~APE~~~~--~~~~~ksDVwS~GvvL~elltG~~p~~ 764 (870)
. ......||+.|||||++.. ..|+.++|+|+..+-.++.+.++.+|.
T Consensus 486 ~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 486 AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 1 1235689999999999986 568888999999999988888776653
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=1e-20 Score=203.86 Aligned_cols=140 Identities=15% Similarity=0.133 Sum_probs=113.4
Q ss_pred ccccccccCcEEEEEEEEC-CeeEEEEEeeccch------------------hhhHHHHHHHHHHHHhccccceeEEEEE
Q 002887 565 FERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSV------------------QGYKQFQAEVELLIRAHHKNLTILVGYC 625 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~------------------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~ 625 (870)
+.+.||+|+||.||+|... ++.||||+++.... .....+.+|++++++++| +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCcCeEE
Confidence 3479999999999999985 88999999965321 134568999999999994 5555544
Q ss_pred ecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEec
Q 002887 626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADF 705 (870)
Q Consensus 626 ~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DF 705 (870)
.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+. +|+||||||+|||++ ++.+||+||
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCC
T ss_pred ec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 33 55699999999999998 421 12346999999999999998 999999999999999 999999999
Q ss_pred cCCccccCCCCccccccccCCCCccCccccc
Q 002887 706 GLSRIFPVEGGTHVSTTVVGTPGYLDPEYYI 736 (870)
Q Consensus 706 Gla~~~~~~~~~~~~~~~~gt~~y~APE~~~ 736 (870)
|+++.. ..++|||++.
T Consensus 237 G~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp TTCEET---------------TSTTHHHHHH
T ss_pred CCCeEC---------------CCCCHHHHHH
Confidence 998643 3468899874
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=2.1e-17 Score=175.56 Aligned_cols=133 Identities=20% Similarity=0.219 Sum_probs=103.3
Q ss_pred ccccccccCcEEEEEEEE--CCee--EEEEEeeccchh------------------------hhHHHHHHHHHHHHhccc
Q 002887 565 FERVLGKGGFGTVYHGYL--DDKQ--VAVKMLSSSSVQ------------------------GYKQFQAEVELLIRAHHK 616 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~--~~~~--vAVK~l~~~~~~------------------------~~~~f~~Ei~~l~~l~H~ 616 (870)
+.+.||+|+||.||+|.. .|+. ||||+++..... ....+.+|+..+.+++|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999998 5888 999987543111 113578999999999988
Q ss_pred cc--eeEEEEEecCCeEEEEEEEccC-C----chhhhhhhcccccccHHHHHHHHHHHHHHHHHHH-hCCCCCceeCCCC
Q 002887 617 NL--TILVGYCDEGANMGLIYEFMAN-G----NLQAHLLEDKADTLCWERRLQIASESAQGLEYLH-NGCKPPIVHRDVK 688 (870)
Q Consensus 617 nI--v~l~g~~~~~~~~~LV~Ey~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH-~~~~~~IvHrDLK 688 (870)
++ ..++++ ...++||||+.+ | +|.+... ..++..+..++.|++.||.||| +. +|+|||||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlk 198 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR-----ELKELDVEGIFNDVVENVKRLYQEA---ELVHADLS 198 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG-----GGGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCS
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh-----ccChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCC
Confidence 64 344443 356899999942 5 4444332 1234567889999999999999 77 99999999
Q ss_pred CCCEEEcCCCcEEEEeccCCccc
Q 002887 689 SANILLNEKFQAKLADFGLSRIF 711 (870)
Q Consensus 689 p~NILld~~~~vkL~DFGla~~~ 711 (870)
|+|||+++ .++|+|||++...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.58 E-value=1.9e-15 Score=165.05 Aligned_cols=126 Identities=29% Similarity=0.505 Sum_probs=110.2
Q ss_pred cCChhhHHHHHHHHhhcC---CCCCCCC--CCCCCCCCCccceecCCCCCCCCcEEEEEcCCCCCcc--cCcccccccCc
Q 002887 362 LTNQQDVDAIMKIKSKYE---VKRDWQG--DPCAPKVYMWQGINCSYDANQSPRIISINLSSSGIAG--DIVPYIFSLTS 434 (870)
Q Consensus 362 ~~~~~d~~al~~~k~~~~---~~~~w~~--~pC~~~~~~W~Gv~C~~~~~~~~~l~~l~L~~n~l~G--~ip~~~~~l~~ 434 (870)
.|.++|..||++||+++. .+.+|.. |||. +.|.||.|+... ...+|+.|+|++|+|+| .+|+.|+++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~~~~C~---~~w~gv~C~~~~-~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN---RTWLGVLCDTDT-QTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT---TCSTTEEECCSS-SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCCCCCCc---CCCcceEeCCCC-CCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 488999999999999984 3568863 4552 249999997421 23699999999999999 99999999999
Q ss_pred cccccccc-CcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 435 IESLDLSK-NSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 435 L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++|+|++ |+++|.+|..|+++++|++|+|++|+++|.+|..+..+++++.|+++.+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 135 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCC
Confidence 99999995 9999999999999999999999999999999999999999999988743
No 256
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.50 E-value=8.2e-15 Score=162.65 Aligned_cols=132 Identities=11% Similarity=0.078 Sum_probs=96.5
Q ss_pred hccccccccCcEEEEEEEEC-CeeEEEEEeeccchh-----h---------h--------HHHHHHHHHHHHhccccce-
Q 002887 564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQ-----G---------Y--------KQFQAEVELLIRAHHKNLT- 619 (870)
Q Consensus 564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~-----~---------~--------~~f~~Ei~~l~~l~H~nIv- 619 (870)
.+.+.||+|++|.||+|... |+.||||+++..... . . ....+|...|.++.+..+.
T Consensus 98 ~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~v 177 (397)
T 4gyi_A 98 SVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPV 177 (397)
T ss_dssp EEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred EecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 45678999999999999976 899999997642110 0 0 0123566677777555442
Q ss_pred -eEEEEEecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887 620 -ILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF 698 (870)
Q Consensus 620 -~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~ 698 (870)
..++. ...+|||||++++.|...... .....++.|++.+|.|||+. +||||||||.|||+++++
T Consensus 178 p~p~~~----~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 178 PEPIAQ----SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCEEEE----ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEE
T ss_pred Ceeeec----cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCC
Confidence 22222 123799999999888765421 12356889999999999998 999999999999998877
Q ss_pred ----------cEEEEeccCCcc
Q 002887 699 ----------QAKLADFGLSRI 710 (870)
Q Consensus 699 ----------~vkL~DFGla~~ 710 (870)
.+.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999997753
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=1.6e-14 Score=177.64 Aligned_cols=126 Identities=16% Similarity=0.233 Sum_probs=107.3
Q ss_pred cCChhhHHHHHHHHhhcCCCCCCCCCC----CCCCCCCc------------cceecCCCCCCCCcEEEEEcCCCCCcccC
Q 002887 362 LTNQQDVDAIMKIKSKYEVKRDWQGDP----CAPKVYMW------------QGINCSYDANQSPRIISINLSSSGIAGDI 425 (870)
Q Consensus 362 ~~~~~d~~al~~~k~~~~~~~~w~~~p----C~~~~~~W------------~Gv~C~~~~~~~~~l~~l~L~~n~l~G~i 425 (870)
.+..+|+.||++||+++... +|+.+. +.|..|.| .||.|+. ..+|+.|+|++|+|+|.|
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~----~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN----NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT----TSCEEEEECTTTCCEEEE
T ss_pred ccchHHHHHHHHHHHHcCCC-CCCcCCCcccccCCccccccccccccccCcCceEecC----CCCEEEEECccCCCCCcC
Confidence 45567999999999998644 885322 11223489 9999975 469999999999999999
Q ss_pred cccccccCccccccc-ccCcCCCC--------------------------------------------------------
Q 002887 426 VPYIFSLTSIESLDL-SKNSLTGP-------------------------------------------------------- 448 (870)
Q Consensus 426 p~~~~~l~~L~~L~L-s~N~l~g~-------------------------------------------------------- 448 (870)
|++|++|++|++|+| ++|.|+|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 88877666
Q ss_pred --------------------CCccccCcCCCCeEEecCCcCCC-----------------CCCCccc--ccccCCccccc
Q 002887 449 --------------------VPEFLAELQSLRVLNLSGNNLQG-----------------SLPSGLS--EKVKNGSLSLS 489 (870)
Q Consensus 449 --------------------iP~~~~~l~~L~~L~ls~N~l~g-----------------~ip~~l~--~~~~~~~l~~~ 489 (870)
||..|++|++|+.|+|++|+|+| .||+.++ ++++|+.|+++
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 89999999999999999999999 4999998 99999999998
Q ss_pred cCC
Q 002887 490 VDG 492 (870)
Q Consensus 490 ~~~ 492 (870)
.+.
T Consensus 500 ~N~ 502 (876)
T 4ecn_A 500 NCP 502 (876)
T ss_dssp SCT
T ss_pred CCC
Confidence 543
No 258
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.44 E-value=3.2e-13 Score=134.16 Aligned_cols=145 Identities=15% Similarity=0.154 Sum_probs=98.9
Q ss_pred cEEeccCCCCCCccccCCCceEEecCCCccccCcceeeCC----CCcccccccccccccccCcCcccceecCCCCCCccE
Q 002887 29 FISIDCGIPENENYADKVTGINYVSDAPYVDTAVSHSISP----EYSKETVERQFSYLRSFPEGIRNCYTLRPPNGDVKF 104 (870)
Q Consensus 29 ~~~idCG~~~~~~~~~~~~~~~~~~D~~~~~~g~~~~~~~----~~~~~~~~~~~~t~R~Fp~g~~ncY~l~~~~~~~~y 104 (870)
.+.||||++.. +| ..|++|.+|..|...|....... ..........|+|.|+||. ..+|.+ |+.++|+|
T Consensus 7 ~~~INcGg~~~---~d-~~gr~w~~D~~~~~~g~~~~~~~~~~~~~~~~~~~~lY~TaR~~~~--~~tY~f-~v~~~G~Y 79 (174)
T 2jwp_A 7 IWAVNAGGESH---VD-VHGIHYRKDPLEGRVGRASDYGMKLPILRSNPEDQVLYQTERYNED--SFGYDI-PIKEEGEY 79 (174)
T ss_dssp EEEEEETSSSE---EE-TTTEEECSSCSSTTCCCCCCCCTTSCCSSSCHHHHHTTTCCCCCCS--CEEEEE-ECCSCEEE
T ss_pred EEEEECCCCCc---cC-CCCCEEcCCcCcccCCcccccccceEecccCCCCchhhhhhccCCC--CeEEEE-EeCCCeEE
Confidence 47899996432 23 46999999988864443221110 1111233568999999985 789999 55778899
Q ss_pred EEEeeeeeccCCCCCCCCceEEEEccee-eEEEEcCC---CccceeEEEEEe-------------cCCCceEEEEeecCC
Q 002887 105 LIRARFMYGNYDGLDKAPSFDLMLGADA-WDSVQLQD---PRSIITKEIIHM-------------PNKDYIHVCLVNTDS 167 (870)
Q Consensus 105 lvR~~f~ygnyd~~~~~p~Fd~~~~~~~-w~~v~~~~---~~~~~~~e~~~~-------------~~~~~~~vcl~~t~~ 167 (870)
+||++|.--.|.. .....||++++|.. ...+++.. ...++..|+.+. +..+.+.|.|.+...
T Consensus 80 ~VrLhF~ei~~~~-~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~~~ 158 (174)
T 2jwp_A 80 VLVLKFAEVYFAQ-SQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKGYY 158 (174)
T ss_dssp EEEEEEECCSCCC-SSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECSSS
T ss_pred EEEEEEeccccCC-CCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEeccCC
Confidence 9999997666654 44578999999976 45565421 222445566554 356789999997655
Q ss_pred CCceeeeeeeeecC
Q 002887 168 GIPFISALELRPLT 181 (870)
Q Consensus 168 ~~pfis~lEl~~l~ 181 (870)
+.||||+|||.+-.
T Consensus 159 ~~a~inaIEI~~~~ 172 (174)
T 2jwp_A 159 DNPKVCALFIMKGT 172 (174)
T ss_dssp CSSSEEEEEEESSC
T ss_pred CCcEEEEEEEEeCc
Confidence 66999999999753
No 259
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.42 E-value=9.2e-14 Score=166.63 Aligned_cols=121 Identities=19% Similarity=0.257 Sum_probs=103.7
Q ss_pred cCChhhHHHHHHHHhhcCC------------CCCCCC--CCCCCCCCCc---cceecCCCCCCCCcEEEEEcCCCCCccc
Q 002887 362 LTNQQDVDAIMKIKSKYEV------------KRDWQG--DPCAPKVYMW---QGINCSYDANQSPRIISINLSSSGIAGD 424 (870)
Q Consensus 362 ~~~~~d~~al~~~k~~~~~------------~~~w~~--~pC~~~~~~W---~Gv~C~~~~~~~~~l~~l~L~~n~l~G~ 424 (870)
....+|+.||.+|+++.+. ..+|+. ++| .| .||+|+.. .+|+.|+|++|+|+|.
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-----~w~~~~GV~C~~~----~~V~~L~L~~~~l~g~ 96 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-----MWGAQPGVSLNSN----GRVTGLSLEGFGASGR 96 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-----GTTCCTTEEECTT----CCEEEEECTTSCCEEE
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-----cccCCCCeEEcCC----CCEEEEEecCcccCCc
Confidence 3445799999999998632 126753 334 79 99999752 6999999999999999
Q ss_pred CcccccccCcccccccccC-------------------------------------------------------------
Q 002887 425 IVPYIFSLTSIESLDLSKN------------------------------------------------------------- 443 (870)
Q Consensus 425 ip~~~~~l~~L~~L~Ls~N------------------------------------------------------------- 443 (870)
+|++|++|++|++|+|++|
T Consensus 97 lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 97 VPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp ECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred CChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 9999999999999999988
Q ss_pred -----------------cCCCCCCccccCcCCCCeEEecCCcCCCC-----------------CCCccc--ccccCCccc
Q 002887 444 -----------------SLTGPVPEFLAELQSLRVLNLSGNNLQGS-----------------LPSGLS--EKVKNGSLS 487 (870)
Q Consensus 444 -----------------~l~g~iP~~~~~l~~L~~L~ls~N~l~g~-----------------ip~~l~--~~~~~~~l~ 487 (870)
+|+| ||..|++|++|++|+|++|+|+|. +|..++ ++++|+.|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 4556 999999999999999999999997 999999 999999999
Q ss_pred cccCC
Q 002887 488 LSVDG 492 (870)
Q Consensus 488 ~~~~~ 492 (870)
++.+.
T Consensus 256 L~~n~ 260 (636)
T 4eco_A 256 VYNCP 260 (636)
T ss_dssp EECCT
T ss_pred ecCCc
Confidence 98543
No 260
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.34 E-value=4.6e-13 Score=164.14 Aligned_cols=122 Identities=26% Similarity=0.370 Sum_probs=97.3
Q ss_pred ccCChhhHHHHHHHHhhcC---CCCCCC-CCCCCCCCCCccceecCCCCCCCCcEEEEEcCCCCCccc---Cc-------
Q 002887 361 LLTNQQDVDAIMKIKSKYE---VKRDWQ-GDPCAPKVYMWQGINCSYDANQSPRIISINLSSSGIAGD---IV------- 426 (870)
Q Consensus 361 ~~~~~~d~~al~~~k~~~~---~~~~w~-~~pC~~~~~~W~Gv~C~~~~~~~~~l~~l~L~~n~l~G~---ip------- 426 (870)
....++|.+||++||+.+. .+.+|. ++.|| .|.||+|+ ..+|+.|+|+++++.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~~l~~W~~~~~~C----~w~gv~C~-----~~~v~~L~L~~~~l~g~~~~l~~~l~~L~ 77 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKNLLPDWSSNKNPC----TFDGVTCR-----DDKVTSIDLSSKPLNVGFSAVSSSLLSLT 77 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTTSSTTCCTTSCGG----GSTTEEEE-----TTEEEEEECTTSCCCEEHHHHHHHTTTCT
T ss_pred ccCCHHHHHHHHHHHhhCCCcccccCCCCCCCCc----CCcceEEC-----CCcEEEEECCCCCcCCccCccChhHhccC
Confidence 3456789999999999874 477996 44443 89999997 35999999999999997 55
Q ss_pred ----------------ccccccCcccccccccCcCCCCCCc--cccCcCCCCeEEecCCcCCCCCCCcc-cccccCCccc
Q 002887 427 ----------------PYIFSLTSIESLDLSKNSLTGPVPE--FLAELQSLRVLNLSGNNLQGSLPSGL-SEKVKNGSLS 487 (870)
Q Consensus 427 ----------------~~~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~~L~~L~ls~N~l~g~ip~~l-~~~~~~~~l~ 487 (870)
..|++|++|++|+|++|+++|.+|. .+++|++|++|+|++|+++|.+|..+ ..+++|+.|+
T Consensus 78 ~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 78 GLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp TCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred cccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 4677778888888888888888888 88888888888888888888888766 6777777777
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 158 Ls~n 161 (768)
T 3rgz_A 158 LSAN 161 (768)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 6643
No 261
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.27 E-value=6.3e-12 Score=124.36 Aligned_cols=103 Identities=20% Similarity=0.174 Sum_probs=89.9
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
|.|+.|.|+++. .....++.|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 589999998742 23467899999999999988999999999999999999999777777899999999999999
Q ss_pred cCCCCCCCcccccccCCccccccCCCCCCCC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVDGNRNLCP 498 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~~n~~lc~ 498 (870)
+|++..|..+..+++|+.|+++ +|+..|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~--~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLL--NNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECC--SSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeC--CCCCCCC
Confidence 9997777779999999988876 7777665
No 262
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.26 E-value=1.3e-12 Score=129.77 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=91.0
Q ss_pred eEEeeccCCCC--ccCCceeccCCCCC-ccccccc-cccCCCCCCCCChHHhhhhceecCCCCCceEEeec-ccCCcceE
Q 002887 203 LVLRWDVGTPL--DIYDRIWWPDNFKN-VERISTS-SNVNPATSLFQPPVTVMQSAIIPANGSSSFWFSWE-SVSTVFKY 277 (870)
Q Consensus 203 ~~~R~~~g~p~--D~~dR~W~~~~~~~-~~~~st~-~~~~~~~~~~~~P~~v~~tA~~~~~~~~~l~~~w~-~~~~~~~y 277 (870)
...|+|+|++. |..+|.|.+|.... ....+.. ..+.. ...+.+|..|||||.... . +++|. +++++-.|
T Consensus 6 ~~~~INcGg~~~~d~~gr~w~~D~~~~~~g~~~~~~~~~~~-~~~~~~~~~lY~TaR~~~---~--~~tY~f~v~~~G~Y 79 (174)
T 2jwp_A 6 VIWAVNAGGESHVDVHGIHYRKDPLEGRVGRASDYGMKLPI-LRSNPEDQVLYQTERYNE---D--SFGYDIPIKEEGEY 79 (174)
T ss_dssp EEEEEEETSSSEEETTTEEECSSCSSTTCCCCCCCCTTSCC-SSSCHHHHHTTTCCCCCC---S--CEEEEEECCSCEEE
T ss_pred EEEEEECCCCCccCCCCCEEcCCcCcccCCcccccccceEe-cccCCCCchhhhhhccCC---C--CeEEEEEeCCCeEE
Confidence 57899999974 67999999884311 1111110 11111 112345899999998743 2 45555 45667799
Q ss_pred EEEEeeeccchhcccccceEEEEEECCccccCCCCCCccc----ceee--eee------------eeccceEEEEEEecc
Q 002887 278 YTCMYFSEFESEQAETRSREMNIYLNGRFWSEIPPPQYLN----TTTH--RLT------------ATNAQQYVISIMQTK 339 (870)
Q Consensus 278 ~v~lhFae~~~~~~~~~~R~F~i~~ng~~~~~~~~p~~~~----~~~~--~~~------------~~~~~~~~~sl~~t~ 339 (870)
.|.|||||+.. .+.++|+|||++||+.+.+.+++.... +... .+. ....+.+++++.+.
T Consensus 80 ~VrLhF~ei~~--~~~~~rvFdV~ing~~~l~~fdi~~~ag~~~~~~~~~~~~v~~~~l~i~~~~~~~~g~L~I~f~p~- 156 (174)
T 2jwp_A 80 VLVLKFAEVYF--AQSQQKVFDVRVNGHTVVKDLDIFDRVGHSTAHDEIIPISIKKGKLSVQGEVSTFTGKLSVEFVKG- 156 (174)
T ss_dssp EEEEEEECCSC--CCSSSSCEEEEETTEEEEEEECHHHHHSSSSCEEEEEEEEEETTEEEETTEEEECCSEEEEEEECS-
T ss_pred EEEEEEecccc--CCCCCeEeEEEECCEEeecCcCHHHhhCCCeeEEEEEEEEEecCceeeeeeecccCCeEEEEEecc-
Confidence 99999999975 567899999999999876544432111 1000 111 13567788888864
Q ss_pred CcchhhHHHHHHHhh
Q 002887 340 NSSLAPILNALEIYQ 354 (870)
Q Consensus 340 ~s~lppilna~ei~~ 354 (870)
..-.|+|||+||+.
T Consensus 157 -~~~~a~inaIEI~~ 170 (174)
T 2jwp_A 157 -YYDNPKVCALFIMK 170 (174)
T ss_dssp -SSCSSSEEEEEEES
T ss_pred -CCCCcEEEEEEEEe
Confidence 24469999999863
No 263
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.23 E-value=5.6e-12 Score=154.48 Aligned_cols=97 Identities=27% Similarity=0.473 Sum_probs=84.5
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
...++.|+|++|+|+|.||.+|++|++|+.|+|++|+|+|.||..|++|++|+.|||++|+|+|.||..+..++.|+.|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999988888777
Q ss_pred cc---------------------cCCCCCCCCC--Ccccc
Q 002887 488 LS---------------------VDGNRNLCPS--ASCKK 504 (870)
Q Consensus 488 ~~---------------------~~~n~~lc~~--~sc~~ 504 (870)
++ |.||+++||. ..|..
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~ 750 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDP 750 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCC
Confidence 54 4478888876 35653
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.21 E-value=3.2e-12 Score=140.36 Aligned_cols=129 Identities=16% Similarity=0.322 Sum_probs=105.9
Q ss_pred ccCChhhHHHHHHHHhhcC-----CCCCCC-CCCCCCCCCCccceecCCC-----CCCCCcEEEEEcCCCCCcccCcccc
Q 002887 361 LLTNQQDVDAIMKIKSKYE-----VKRDWQ-GDPCAPKVYMWQGINCSYD-----ANQSPRIISINLSSSGIAGDIVPYI 429 (870)
Q Consensus 361 ~~~~~~d~~al~~~k~~~~-----~~~~w~-~~pC~~~~~~W~Gv~C~~~-----~~~~~~l~~l~L~~n~l~G~ip~~~ 429 (870)
.....+|..||+++|..+. ...+|. +..|.+..+.|.|+.|... .....+|+.|+|++|+|+ .||+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 4567889999999999762 234562 1122333348999999521 123468999999999999 999999
Q ss_pred cccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccCC
Q 002887 430 FSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVDG 492 (870)
Q Consensus 430 ~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~~ 492 (870)
++|++|++|+|++|+++ .||..++++++|++|+|++|+|+ .+|..++.+++|+.|+++.+.
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEET
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCC
Confidence 99999999999999999 99999999999999999999999 999999999999999998543
No 265
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.18 E-value=2e-11 Score=123.24 Aligned_cols=98 Identities=15% Similarity=0.168 Sum_probs=80.6
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCccccCcCCCCeEEecC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSG 466 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~ 466 (870)
|.|..|.|++.+ .....++.|+|++|+|++..+. .|+++++|++|+|++|+|++.+|..|+.+++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 689999998643 2334788899999999866554 388999999999999999988888899999999999999
Q ss_pred CcCCCCCCCcccccccCCccccccC
Q 002887 467 NNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 467 N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|+|++..|..+..+++|+.|+++.+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N 112 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDN 112 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCC
Confidence 9999888888888888888887743
No 266
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.16 E-value=6e-11 Score=117.77 Aligned_cols=103 Identities=17% Similarity=0.139 Sum_probs=86.7
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
+...-+.|++.. .....++.|+|++|+|++..|..|++|++|++|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 12 C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 12 CDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp ECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 456778998642 23467899999999999988999999999999999999999755566799999999999999
Q ss_pred cCCCCCCCcccccccCCccccccCCCCCCCC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVDGNRNLCP 498 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~~n~~lc~ 498 (870)
+|++..|..+..+++|+.|+++ +|+..|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~--~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLY--NNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECC--SSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeC--CCCcccc
Confidence 9996666668999999988776 7776654
No 267
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.15 E-value=6.1e-11 Score=119.83 Aligned_cols=104 Identities=17% Similarity=0.212 Sum_probs=88.4
Q ss_pred CCCCCCC-CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCC
Q 002887 387 DPCAPKV-YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSL 459 (870)
Q Consensus 387 ~pC~~~~-~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L 459 (870)
.+|...+ |.|..|.|++.. ..+..++.|+|++|+|+ .||..|.++++|+.|+|++|+|++..|..|.+|++|
T Consensus 2 ~~CP~~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L 80 (193)
T 2wfh_A 2 SRCPTECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80 (193)
T ss_dssp --CCTTCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCCCCCCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCC
Confidence 3453332 679999998742 24467999999999998 899999999999999999999998888889999999
Q ss_pred CeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 460 RVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 460 ~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+.|+|++|+|++..|..+..+++|+.|+++.|
T Consensus 81 ~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N 112 (193)
T 2wfh_A 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGN 112 (193)
T ss_dssp CEEECCSSCCCBCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCEeCHHHhCCCCCCCEEECCCC
Confidence 99999999999888888999999999888743
No 268
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.13 E-value=1.5e-10 Score=122.32 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=110.3
Q ss_pred ccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
+...++.|+.+.||+....++.+++|+...........+.+|+++++.+. |..+.++++++......++||||++|.+|
T Consensus 18 ~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 97 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLC 97 (263)
T ss_dssp EEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEH
T ss_pred eEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeeh
Confidence 45677888889999998878899999987643233456899999999994 66788899999888899999999999998
Q ss_pred hhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 002887 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC--------------------------------------------- 678 (870)
Q Consensus 644 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~--------------------------------------------- 678 (870)
.+.+.. ......++.+++++|..||+..
T Consensus 98 ~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (263)
T 3tm0_A 98 SEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL 170 (263)
T ss_dssp HHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred hhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence 775321 1123478889999999999810
Q ss_pred -----------CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 679 -----------KPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 679 -----------~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
...++|+|+++.||+++++..+.|+||+.+..
T Consensus 171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998866677999997753
No 269
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.11 E-value=8.3e-11 Score=129.78 Aligned_cols=102 Identities=23% Similarity=0.255 Sum_probs=83.3
Q ss_pred CCccceecCCC-C-------CCCCcEEEEEcCC-CCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEe
Q 002887 394 YMWQGINCSYD-A-------NQSPRIISINLSS-SGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNL 464 (870)
Q Consensus 394 ~~W~Gv~C~~~-~-------~~~~~l~~l~L~~-n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~l 464 (870)
|.|..|.|++. . ....+|+.|+|++ |.|++..|..|++|++|+.|+|++|+|+|..|..|++|++|+.|+|
T Consensus 8 C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 8 HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred ccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 58999999875 1 1234589999996 9999888889999999999999999999999999999999999999
Q ss_pred cCCcCCCCCCCcccccccCCccccccCCCCCCCC
Q 002887 465 SGNNLQGSLPSGLSEKVKNGSLSLSVDGNRNLCP 498 (870)
Q Consensus 465 s~N~l~g~ip~~l~~~~~~~~l~~~~~~n~~lc~ 498 (870)
++|+|++ +|..+.....|..|++. +|+..|.
T Consensus 88 ~~N~l~~-~~~~~~~~~~L~~l~l~--~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALES-LSWKTVQGLSLQELVLS--GNPLHCS 118 (347)
T ss_dssp CSSCCSC-CCSTTTCSCCCCEEECC--SSCCCCC
T ss_pred CCCccce-eCHHHcccCCceEEEee--CCCccCC
Confidence 9999995 45444443347777665 6766664
No 270
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.11 E-value=9e-11 Score=121.84 Aligned_cols=97 Identities=19% Similarity=0.151 Sum_probs=83.9
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
+|.+|+|+... ..++.++.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 20 s~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 20 SGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred eCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 89999998642 345679999999999999889999999999999999999985555667999999999999999
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++..|..+..+++|+.|+++.+
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N 122 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCN 122 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccChhHhCcchhhCeEeccCC
Confidence 99777777888999998888743
No 271
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.09 E-value=1.3e-10 Score=115.21 Aligned_cols=98 Identities=19% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
|.|.+|.|+..+ .....++.|+|++|+|++..+..++++++|++|+|++|+|++..|..++.+++|+.|+|++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 589999998643 23468899999999999766667899999999999999999776777899999999999999
Q ss_pred cCCCCCCCcccccccCCccccccC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+|++..|..+..+++++.|+++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N 110 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTN 110 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CccccCHHHhhCCcccCEEECcCC
Confidence 999877777889999999888743
No 272
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.02 E-value=3.9e-10 Score=114.86 Aligned_cols=98 Identities=21% Similarity=0.212 Sum_probs=83.3
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
|.|.+|.|+..+ ...++++.|+|++|+|++..+..++++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 7 C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 7 CSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 589999998643 23457999999999999766666899999999999999999766667899999999999999
Q ss_pred cCCCCCCCcccccccCCccccccC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+|++..+..+..+++|+.|+++.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N 110 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTN 110 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCccCHhHhcCccCCCEEEcCCC
Confidence 999776677889999999888743
No 273
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.00 E-value=3.9e-10 Score=116.29 Aligned_cols=98 Identities=21% Similarity=0.208 Sum_probs=83.4
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
|.|..|.|++.+ ..+..++.|+|++|+|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 689999998643 23457899999999999777778999999999999999999888999999999999999999
Q ss_pred cCCCCCCCcccccccCCccccccC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+|++..+..+..+++|+.|+++.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N 114 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNAN 114 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCccCHhHccCCCCCCEEECCCC
Confidence 999554455688899998888744
No 274
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97 E-value=1.8e-09 Score=113.32 Aligned_cols=128 Identities=16% Similarity=0.094 Sum_probs=97.5
Q ss_pred cccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc--eeEEEEEecCCeEEEEEEEccCCchhhh
Q 002887 570 GKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL--TILVGYCDEGANMGLIYEFMANGNLQAH 646 (870)
Q Consensus 570 G~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI--v~l~g~~~~~~~~~LV~Ey~~~gsL~~~ 646 (870)
+.|..+.||+.... ++.+++|+.... ....+.+|+.+++.+++.++ .+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 45666999999765 677999997654 23567899999999976554 45888888878899999999998884
Q ss_pred hhhcccccccHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------
Q 002887 647 LLEDKADTLCWERRLQIASESAQGLEYLHNGC------------------------------------------------ 678 (870)
Q Consensus 647 l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~------------------------------------------------ 678 (870)
... .+ ...++.++++.|..||+..
T Consensus 104 ~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 211 11 2356778888888888642
Q ss_pred -------CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 679 -------KPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 679 -------~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
...++|+|++|.||+++++..+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998753
No 275
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.94 E-value=7.9e-10 Score=113.98 Aligned_cols=98 Identities=12% Similarity=0.124 Sum_probs=81.5
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCccccCcCCCCeEEecC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSG 466 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~ 466 (870)
|.|..+.|++.. ..+..++.|+|++|+|++..|. .|.++++|+.|+|++|+|++..|..|+++++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 689999998743 2334678899999999977664 478999999999999999987777899999999999999
Q ss_pred CcCCCCCCCcccccccCCccccccC
Q 002887 467 NNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 467 N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|+|++..|..+..+++|+.|+++.+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N 115 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSN 115 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTS
T ss_pred CccCccCHhHhcCCcCCCEEECCCC
Confidence 9999887778888888888888744
No 276
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=113.04 Aligned_cols=89 Identities=22% Similarity=0.254 Sum_probs=78.7
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.|++..|..|.+|++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..++++..|+
T Consensus 80 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 159 (220)
T 2v70_A 80 ASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLN 159 (220)
T ss_dssp CTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEE
Confidence 45789999999999988777899999999999999999988899999999999999999999988899999999988877
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 160 L~--~N~l~c~ 168 (220)
T 2v70_A 160 LL--ANPFNCN 168 (220)
T ss_dssp CC--SCCEECS
T ss_pred ec--CcCCcCC
Confidence 76 7776664
No 277
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.88 E-value=4.5e-10 Score=130.12 Aligned_cols=79 Identities=20% Similarity=0.190 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCCCcccCccccc-ccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIF-SLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
+.++.|+|++|.|+|.+|..+. +|++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+| +|..+..+++|..|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~ 220 (487)
T 3oja_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWIS 220 (487)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEE
Confidence 4566666666666666665554 566666666666666544 22 2346666666666666664 344466666666666
Q ss_pred ccc
Q 002887 488 LSV 490 (870)
Q Consensus 488 ~~~ 490 (870)
++.
T Consensus 221 Ls~ 223 (487)
T 3oja_A 221 LRN 223 (487)
T ss_dssp CTT
T ss_pred ecC
Confidence 653
No 278
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.88 E-value=5.7e-09 Score=115.73 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=107.7
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEee--ccc-hhhhHHHHHHHHHHHHhc--cccceeEEEEEecC---CeEEEEEEEc
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLS--SSS-VQGYKQFQAEVELLIRAH--HKNLTILVGYCDEG---ANMGLIYEFM 638 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~--~~~-~~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~---~~~~LV~Ey~ 638 (870)
+.|+.|.++.||+....+..+++|+.. ... ......+.+|+.+++.++ +..+.++++++.+. ...++||||+
T Consensus 44 ~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v 123 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFV 123 (359)
T ss_dssp EECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECC
T ss_pred EEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEec
Confidence 468999999999999888889999876 332 123457889999999997 45578899998776 4588999999
Q ss_pred cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCC----------------------------------------
Q 002887 639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC---------------------------------------- 678 (870)
Q Consensus 639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~---------------------------------------- 678 (870)
++..+.+.. ...++..++..++.+++++|+.||+..
T Consensus 124 ~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (359)
T 3dxp_A 124 SGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDS 199 (359)
T ss_dssp CCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHH
Confidence 998775422 134677888899999999999999731
Q ss_pred ---------------CCCceeCCCCCCCEEEcCCCc--EEEEeccCCcc
Q 002887 679 ---------------KPPIVHRDVKSANILLNEKFQ--AKLADFGLSRI 710 (870)
Q Consensus 679 ---------------~~~IvHrDLKp~NILld~~~~--vkL~DFGla~~ 710 (870)
...++|||+++.|||+++++. +.|+||+.+..
T Consensus 200 ~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 200 LMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998864
No 279
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.88 E-value=1.6e-09 Score=109.28 Aligned_cols=89 Identities=25% Similarity=0.296 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
..+++.|+|++|.|++..+..|.+|++|+.|+|++|+|++..|..|..|++|+.|+|++|+|++..+..+..++++..|+
T Consensus 53 l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (193)
T 2wfh_A 53 YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA 132 (193)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE
Confidence 35899999999999988788899999999999999999998888999999999999999999966666788899998877
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 133 L~--~N~~~C~ 141 (193)
T 2wfh_A 133 IG--ANPLYCD 141 (193)
T ss_dssp CC--SSCEECS
T ss_pred eC--CCCeecC
Confidence 76 8887764
No 280
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.87 E-value=7.7e-10 Score=120.44 Aligned_cols=108 Identities=24% Similarity=0.460 Sum_probs=90.1
Q ss_pred CCCCCCCCCCC--CCccceecCCCC-----------CCCCcEEEEEcCC-CCCcccCcccccccCcccccccccCcCCCC
Q 002887 383 DWQGDPCAPKV--YMWQGINCSYDA-----------NQSPRIISINLSS-SGIAGDIVPYIFSLTSIESLDLSKNSLTGP 448 (870)
Q Consensus 383 ~w~~~pC~~~~--~~W~Gv~C~~~~-----------~~~~~l~~l~L~~-n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~ 448 (870)
.|.|-.|.... ..-..+..+... ...+.++.|+|++ |++.|.+|..|++|++|++|+|++|+++|.
T Consensus 37 ~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 116 (313)
T 1ogq_A 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116 (313)
T ss_dssp CSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEE
T ss_pred CCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCc
Confidence 39998885421 233334433211 1235789999995 999999999999999999999999999999
Q ss_pred CCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccccc
Q 002887 449 VPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSV 490 (870)
Q Consensus 449 iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~ 490 (870)
+|..|+++++|++|+|++|+++|.+|..+..+++|+.|+++.
T Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 117 IPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 999999999999999999999999999999999999998874
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.85 E-value=1.6e-09 Score=123.72 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=86.7
Q ss_pred CCCCCCCCCccc--eecCCCC-----CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCC-ccccCcCC
Q 002887 387 DPCAPKVYMWQG--INCSYDA-----NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVP-EFLAELQS 458 (870)
Q Consensus 387 ~pC~~~~~~W~G--v~C~~~~-----~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~ 458 (870)
|||. ..|.|.+ |.|++.+ ..+++++.|+|++|++++..|..|++|++|++|+|++|.+++.+| ..|.++++
T Consensus 2 ~p~~-~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~ 80 (455)
T 3v47_A 2 DPGT-SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80 (455)
T ss_dssp ------CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTT
T ss_pred CCcc-ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECccccccccc
Confidence 5664 3456666 9998642 234679999999999999889999999999999999999998885 57899999
Q ss_pred CCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 459 LRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 459 L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++|+|++|++++.+|..+..+++|+.|+++.+
T Consensus 81 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 113 (455)
T 3v47_A 81 LIILKLDYNQFLQLETGAFNGLANLEVLTLTQC 113 (455)
T ss_dssp CCEEECTTCTTCEECTTTTTTCTTCCEEECTTS
T ss_pred CCEEeCCCCccCccChhhccCcccCCEEeCCCC
Confidence 999999999999999999999999999988744
No 282
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.82 E-value=3e-09 Score=111.69 Aligned_cols=97 Identities=20% Similarity=0.204 Sum_probs=83.1
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.|..|+|++.. ..+..++.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|..+++|+.|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 35556665421 244678999999999999888899999999999999999999888889999999999999999
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++..|..+..+++|+.|+++.+
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N 117 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGN 117 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSS
T ss_pred ccccChhHhcccCCCCEEEcCCC
Confidence 99877788899999999988744
No 283
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.79 E-value=4.4e-09 Score=105.87 Aligned_cols=89 Identities=21% Similarity=0.333 Sum_probs=82.5
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+|..+..+++++.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999999999999999999999999999999999899999999999999999999999999999999888
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 133 L~--~N~l~c~ 141 (192)
T 1w8a_A 133 LA--SNPFNCN 141 (192)
T ss_dssp CT--TCCBCCS
T ss_pred eC--CCCccCc
Confidence 76 7776654
No 284
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.77 E-value=7e-09 Score=106.80 Aligned_cols=88 Identities=22% Similarity=0.208 Sum_probs=61.0
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+++++.|++
T Consensus 80 ~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 159 (220)
T 2v9t_B 80 RSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 159 (220)
T ss_dssp SSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEe
Confidence 46777777777777333333567777777777777777777777777777777777777777666666777777776655
Q ss_pred ccCCCCCCCC
Q 002887 489 SVDGNRNLCP 498 (870)
Q Consensus 489 ~~~~n~~lc~ 498 (870)
+ +|+..|.
T Consensus 160 ~--~N~~~c~ 167 (220)
T 2v9t_B 160 A--QNPFICD 167 (220)
T ss_dssp C--SSCEECS
T ss_pred C--CCCcCCC
Confidence 4 6665553
No 285
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.76 E-value=9e-09 Score=101.89 Aligned_cols=89 Identities=20% Similarity=0.168 Sum_probs=75.8
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|+|++..+..++++++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++..+..+..+++++.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 46899999999999966666689999999999999999987777789999999999999999966555568888898887
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 131 l~--~N~~~~~ 139 (177)
T 2o6r_A 131 LH--TNPWDCS 139 (177)
T ss_dssp CC--SSCBCCC
T ss_pred ec--CCCeecc
Confidence 76 6765553
No 286
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.76 E-value=6.6e-09 Score=115.38 Aligned_cols=108 Identities=22% Similarity=0.183 Sum_probs=87.2
Q ss_pred CCCCCCCCCC-CCccceecCCCC------CCCCcEEEEEcCCCCCcccCccccc-ccCcccccccccCcCCCCCCccccC
Q 002887 384 WQGDPCAPKV-YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIF-SLTSIESLDLSKNSLTGPVPEFLAE 455 (870)
Q Consensus 384 w~~~pC~~~~-~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~ 455 (870)
+....|...| |.|.-|.|++.. ..+..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.+
T Consensus 7 ~~~~~Cp~~C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~ 86 (361)
T 2xot_A 7 RSVVSCPANCLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP 86 (361)
T ss_dssp CCCTTCCTTCEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT
T ss_pred CcCCCCCCCCEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC
Confidence 4445674444 678999998642 2344678899999999977777777 8999999999999999877788999
Q ss_pred cCCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 456 LQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 456 l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++|+.|+|++|+|++..|..+..+.+|+.|+++.+
T Consensus 87 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 122 (361)
T 2xot_A 87 VPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNN 122 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCC
Confidence 999999999999999777778888899988888743
No 287
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.76 E-value=6.7e-09 Score=123.32 Aligned_cols=90 Identities=23% Similarity=0.196 Sum_probs=80.3
Q ss_pred CCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCccccc-ccCCc
Q 002887 407 QSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEK-VKNGS 485 (870)
Q Consensus 407 ~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~-~~~~~ 485 (870)
..+.++.|+|++|+|++.+|..|.+|++|+.|+|++|+|++..|..|..|++|+.|||++|+|++.+|..+..+ .+|+.
T Consensus 492 ~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~ 571 (635)
T 4g8a_A 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF 571 (635)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCE
T ss_pred hccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCE
Confidence 34678999999999999999999999999999999999999888899999999999999999999999998887 56787
Q ss_pred cccccCCCCCCCC
Q 002887 486 LSLSVDGNRNLCP 498 (870)
Q Consensus 486 l~~~~~~n~~lc~ 498 (870)
|+++ +|+..|.
T Consensus 572 L~L~--~Np~~C~ 582 (635)
T 4g8a_A 572 LNLT--QNDFACT 582 (635)
T ss_dssp EECT--TCCBCCS
T ss_pred EEee--CCCCccc
Confidence 7766 8888886
No 288
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.75 E-value=1e-08 Score=106.26 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=67.8
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..|..+++|+.|+|++|+|+ .||..+..+++|+.|+|++|+|++..+..+..+++++.|+
T Consensus 87 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 165 (229)
T 3e6j_A 87 LTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAY 165 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEE
Confidence 457888888888888655556788888888888888888 7888888888888888888888866666677777777766
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 166 l~--~N~~~c~ 174 (229)
T 3e6j_A 166 LF--GNPWDCE 174 (229)
T ss_dssp CT--TSCBCTT
T ss_pred ee--CCCccCC
Confidence 65 7766654
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.73 E-value=8.2e-09 Score=113.10 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=41.9
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+++.|+|++|++.|.+|..++++++|+.|+|++|++.|.+|..++++++|+.|+|++|++.|.+|+.++.++++..+.+
T Consensus 230 ~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l 308 (328)
T 4fcg_A 230 KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILV 308 (328)
T ss_dssp TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEEC
T ss_pred CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeC
Confidence 4555555555555555555555555555555555555555555555555555555555555555555555555444433
No 290
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.72 E-value=1.1e-08 Score=110.82 Aligned_cols=182 Identities=20% Similarity=0.192 Sum_probs=121.5
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhc-ccc--ceeEEEEEecCC---eEEEEEEEccC
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKN--LTILVGYCDEGA---NMGLIYEFMAN 640 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~n--Iv~l~g~~~~~~---~~~LV~Ey~~~ 640 (870)
+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+.+....... ..++||++++|
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred EecCCCCcceEEEEC---CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 458999999999863 56888886533 34567899999999883 333 334555544333 34789999999
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC-------------------------------------------
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG------------------------------------------- 677 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~------------------------------------------- 677 (870)
.++..... ..++..++..++.++++.++.||+.
T Consensus 101 ~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 101 VPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp EECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred eECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 88865332 2466777788888888888888861
Q ss_pred ------------CCCCceeCCCCCCCEEEcC--CCcEEEEeccCCccccCCCCccccccccCCCCc---cCcccccc---
Q 002887 678 ------------CKPPIVHRDVKSANILLNE--KFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGY---LDPEYYIS--- 737 (870)
Q Consensus 678 ------------~~~~IvHrDLKp~NILld~--~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y---~APE~~~~--- 737 (870)
..+.++|+|+++.||++++ +..+.|+||+.+...... . .......+ ..|+....
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~--~----Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD--N----DFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT--H----HHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH--H----HHHHHHhhccccCHHHHHHHHH
Confidence 1235899999999999998 556789999998653211 0 00000011 12222110
Q ss_pred --CC---------CCccchHHHHHHHHHHHHhCCCCC
Q 002887 738 --NR---------LTEKSDVYSFGVVLLELITGQPVI 763 (870)
Q Consensus 738 --~~---------~~~ksDVwS~GvvL~elltG~~p~ 763 (870)
+. .....+.|+++.+++++.+|+.+|
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 01 112368999999999999998765
No 291
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.72 E-value=6.8e-09 Score=123.28 Aligned_cols=94 Identities=20% Similarity=0.140 Sum_probs=78.7
Q ss_pred ceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC
Q 002887 398 GINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG 471 (870)
Q Consensus 398 Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g 471 (870)
-|+|++.+ +.+..++.|+|++|+|++..|..|++|++|++|||++|+|++..|..|.+|++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 47898532 345679999999999997666789999999999999999997777789999999999999999997
Q ss_pred CCCCcccccccCCccccccC
Q 002887 472 SLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 472 ~ip~~l~~~~~~~~l~~~~~ 491 (870)
..|..+..+.+|+.|+++.+
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N 134 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVET 134 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTS
T ss_pred CCHHHhcCCCCCCEEECCCC
Confidence 66667888888888887644
No 292
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.72 E-value=1.5e-08 Score=116.08 Aligned_cols=97 Identities=21% Similarity=0.153 Sum_probs=86.1
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.|..|.|+..+ ..++.++.|+|++|+|++..|..|.+|++|+.|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 55 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 55 QFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SSCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 47889998643 345689999999999999889999999999999999999999888999999999999999999
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++..+..+..+++|+.|+++.+
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N 157 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNN 157 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSC
T ss_pred CCccChhhhcccCCCCEEECCCC
Confidence 99777777899999999988744
No 293
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.71 E-value=5.8e-09 Score=100.09 Aligned_cols=79 Identities=24% Similarity=0.238 Sum_probs=45.2
Q ss_pred CcEEEEEcCCCCCc-ccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIA-GDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~-G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
++++.|+|++|+++ |.+|..+..+++|+.|+|++|++++. ..++++++|+.|+|++|++++.+|..+..++++..|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 35555666666655 55555555566666666666655543 4455556666666666666555555555555555555
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 95 ls 96 (149)
T 2je0_A 95 LS 96 (149)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 294
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.70 E-value=1.4e-08 Score=107.75 Aligned_cols=108 Identities=21% Similarity=0.244 Sum_probs=84.0
Q ss_pred CCCCCCCCCCCCCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCc
Q 002887 383 DWQGDPCAPKVYMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAEL 456 (870)
Q Consensus 383 ~w~~~pC~~~~~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l 456 (870)
.|.|..|.. ...|..|.|+... ..+..++.|+|++|+|++..+..|+++++|++|+|++|++++..+..|.++
T Consensus 6 ~~~~~~C~c-~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l 84 (270)
T 2o6q_A 6 KKDGGVCSC-NNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKEL 84 (270)
T ss_dssp GGGTCSBEE-ETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSC
T ss_pred CCCCCCCEe-CCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCC
Confidence 466666621 1256777887532 234568999999999997666689999999999999999995545556889
Q ss_pred CCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 457 QSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 457 ~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
++|+.|+|++|++++..+..+..+++|+.|+++.+
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred CCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 99999999999999776677788899998888743
No 295
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.70 E-value=1.8e-08 Score=105.79 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=71.7
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..+..+++++.|+
T Consensus 106 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 185 (251)
T 3m19_A 106 LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTIT 185 (251)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEE
Confidence 45788899999998865555678889999999999999876666788889999999999999877777888888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 186 l~--~N~~~c~ 194 (251)
T 3m19_A 186 LF--GNQFDCS 194 (251)
T ss_dssp CC--SCCBCTT
T ss_pred ee--CCceeCC
Confidence 65 7766654
No 296
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.70 E-value=9.4e-09 Score=100.74 Aligned_cols=83 Identities=23% Similarity=0.228 Sum_probs=65.2
Q ss_pred CCCcEEEEEcCCCCCc-ccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCc
Q 002887 407 QSPRIISINLSSSGIA-GDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGS 485 (870)
Q Consensus 407 ~~~~l~~l~L~~n~l~-G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~ 485 (870)
.++.++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3457888888888887 78888888888888888888888865 66788888888888888888777777777888887
Q ss_pred cccccC
Q 002887 486 LSLSVD 491 (870)
Q Consensus 486 l~~~~~ 491 (870)
|+++.+
T Consensus 100 L~Ls~N 105 (168)
T 2ell_A 100 LNLSGN 105 (168)
T ss_dssp EECBSS
T ss_pred EeccCC
Confidence 777643
No 297
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.68 E-value=7.1e-09 Score=121.44 Aligned_cols=96 Identities=20% Similarity=0.134 Sum_probs=82.7
Q ss_pred CccceecCCCC--------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecC
Q 002887 395 MWQGINCSYDA--------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSG 466 (870)
Q Consensus 395 ~W~Gv~C~~~~--------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~ 466 (870)
.|.|+ |+... ...+.++.|+|++|++++..|..|++|++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 5 ~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 5 DASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp CTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 78888 75321 2345899999999999988889999999999999999999988889999999999999999
Q ss_pred CcCCCCCCCcccccccCCccccccC
Q 002887 467 NNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 467 N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++++..|..++.+++|+.|+++.+
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n 108 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGN 108 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTC
T ss_pred CccCccCHHHhccCCCCcEEECCCC
Confidence 9999887777999999998888744
No 298
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.67 E-value=2.7e-08 Score=101.06 Aligned_cols=89 Identities=20% Similarity=0.182 Sum_probs=70.8
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..+.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+..+..+++++.|+
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 45788899999999865555678899999999999999876666788889999999999999876666678888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 155 l~--~N~~~~~ 163 (208)
T 2o6s_A 155 LH--DNPWDCT 163 (208)
T ss_dssp CC--SCCBCCC
T ss_pred ec--CCCeecC
Confidence 76 5655543
No 299
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.66 E-value=2.5e-08 Score=114.78 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=84.5
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.|..|.|+... ..+..++.|+|++|+|++..|..|.++++|++|+|++|++++..|..|++|++|+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 58899998632 345678999999999998888899999999999999999999889999999999999999999
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+++..+..+..+++|+.|+++.+
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n 114 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISEN 114 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTS
T ss_pred CCccCcccccCCCCCCEEECCCC
Confidence 99665566888999999888744
No 300
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.65 E-value=1.7e-08 Score=118.81 Aligned_cols=79 Identities=28% Similarity=0.278 Sum_probs=72.5
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCC-CCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSL-PSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~i-p~~l~~~~~~~~l 486 (870)
.+.++.|+|++|+|+ .||..|++|++|+.|+|++|+|++ || .+++|++|+.|+|++|+|++.+ |..++.+++|..|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 357899999999999 999999999999999999999997 88 7999999999999999999887 9999999999988
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 539 ~L~ 541 (567)
T 1dce_A 539 NLQ 541 (567)
T ss_dssp ECT
T ss_pred Eec
Confidence 887
No 301
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.65 E-value=3.2e-08 Score=105.14 Aligned_cols=89 Identities=21% Similarity=0.189 Sum_probs=72.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..++++++|+.|+|++|++++..|..++.+++|+.|+|++|++++..|..+..+++++.|+
T Consensus 132 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (272)
T 3rfs_A 132 LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211 (272)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEE
Confidence 45788889999988866666678889999999999999877777778889999999999999887777788888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 212 l~--~N~~~~~ 220 (272)
T 3rfs_A 212 LH--DNPWDCT 220 (272)
T ss_dssp CC--SSCBCCC
T ss_pred cc--CCCcccc
Confidence 76 6665554
No 302
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.63 E-value=8.8e-09 Score=98.82 Aligned_cols=80 Identities=24% Similarity=0.286 Sum_probs=69.9
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC-CCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG-SLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g-~ip~~l~~~~~~~~l 486 (870)
.++++.|+|++|+|++. ..++++++|++|+|++|++++.+|..++.+++|+.|+|++|++++ ..|..+..+++++.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 46889999999999876 789999999999999999998899888889999999999999987 345788889999888
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 119 ~l~ 121 (149)
T 2je0_A 119 DLF 121 (149)
T ss_dssp ECT
T ss_pred eCc
Confidence 876
No 303
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.62 E-value=3.7e-08 Score=105.23 Aligned_cols=95 Identities=19% Similarity=0.127 Sum_probs=80.5
Q ss_pred cceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc-C
Q 002887 397 QGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN-L 469 (870)
Q Consensus 397 ~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~-l 469 (870)
..|.|+..+ ..++.++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+ +
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l 93 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQL 93 (285)
T ss_dssp CEEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTC
T ss_pred eEEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCc
Confidence 457887532 345688999999999998777789999999999999999998889999999999999999997 7
Q ss_pred CCCCCCcccccccCCccccccC
Q 002887 470 QGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 470 ~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
++..|..+..+++|+.|+++.+
T Consensus 94 ~~~~~~~~~~l~~L~~L~l~~n 115 (285)
T 1ozn_A 94 RSVDPATFHGLGRLHTLHLDRC 115 (285)
T ss_dssp CCCCTTTTTTCTTCCEEECTTS
T ss_pred cccCHHHhcCCcCCCEEECCCC
Confidence 7666888999999998888743
No 304
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.62 E-value=5.1e-08 Score=106.50 Aligned_cols=93 Identities=23% Similarity=0.261 Sum_probs=81.0
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
+.|..+.|+..+ ..++.++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 110 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCC
Confidence 589999998632 23468899999999999877778999999999999999999888999999999999999999
Q ss_pred cCCCCCCCcccccccCCccccc
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
+++ .+|..+. ++++.|+++
T Consensus 111 ~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 111 QLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp CCS-BCCSSCC--TTCCEEECC
T ss_pred cCC-ccChhhc--ccccEEECC
Confidence 998 7887765 567777776
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.62 E-value=2.9e-08 Score=117.76 Aligned_cols=95 Identities=19% Similarity=0.147 Sum_probs=80.4
Q ss_pred cceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCC
Q 002887 397 QGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQ 470 (870)
Q Consensus 397 ~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~ 470 (870)
..|.|+..+ ..+.+++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++
T Consensus 14 ~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~ 93 (606)
T 3vq2_A 14 ITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQ 93 (606)
T ss_dssp TEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred CceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCccc
Confidence 458887632 34567899999999999888888999999999999999999888888999999999999999999
Q ss_pred CCCCCcccccccCCccccccC
Q 002887 471 GSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 471 g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+..|..++.+++|+.|+++.+
T Consensus 94 ~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 94 SFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CCCTTSSTTCTTCCEEECTTS
T ss_pred ccChhhcCCcccCCEEEccCC
Confidence 888989999988888887744
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.61 E-value=3e-08 Score=105.47 Aligned_cols=94 Identities=20% Similarity=0.140 Sum_probs=82.2
Q ss_pred ceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC
Q 002887 398 GINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG 471 (870)
Q Consensus 398 Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g 471 (870)
.+.|.... ..++.++.|+|++|+|++..+..|+++++|++|+|++|++++..|..+.++++|+.|+|++|++++
T Consensus 11 ~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 90 (276)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred eEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCc
Confidence 57887632 234569999999999998777799999999999999999998777889999999999999999998
Q ss_pred CCCCcccccccCCccccccC
Q 002887 472 SLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 472 ~ip~~l~~~~~~~~l~~~~~ 491 (870)
..|..+..+++++.|+++.+
T Consensus 91 ~~~~~~~~l~~L~~L~l~~n 110 (276)
T 2z62_A 91 LALGAFSGLSSLQKLVAVET 110 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTS
T ss_pred cChhhhcCCccccEEECCCC
Confidence 88899999999999888743
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.60 E-value=5.2e-08 Score=111.03 Aligned_cols=97 Identities=22% Similarity=0.152 Sum_probs=84.0
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.|..|.|+..+ ..+..++.|+|++|+|++..+..|.+|++|++|+|++|++++..|..|.++++|+.|+|++|+
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 47789998632 344678999999999998888999999999999999999998888899999999999999999
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
|++..+..+..+++|+.|+++.+
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N 146 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNN 146 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSC
T ss_pred CCeeCHhHhhccccCceeeCCCC
Confidence 99766668899999998888743
No 308
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.58 E-value=5.2e-08 Score=106.56 Aligned_cols=94 Identities=20% Similarity=0.226 Sum_probs=81.9
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
+.|..+.|+... ...+.++.|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|+.|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 579999998632 23458899999999999877889999999999999999999988999999999999999999
Q ss_pred cCCCCCCCcccccccCCcccccc
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSV 490 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~ 490 (870)
+++ .+|..+. ++++.|+++.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~ 132 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHD 132 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCS
T ss_pred cCC-ccCcccc--ccCCEEECCC
Confidence 999 7888776 6777777763
No 309
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.58 E-value=2.5e-08 Score=110.07 Aligned_cols=97 Identities=22% Similarity=0.149 Sum_probs=80.4
Q ss_pred Cccce-ecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 395 MWQGI-NCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 395 ~W~Gv-~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
.|.|+ .|++.. ...+.++.|+|++|++++..+..|.++++|++|+|++|++++..|..|+++++|+.|+|++|
T Consensus 31 ~~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 31 DRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp CTTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCeEeeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 78887 333321 23458999999999999766668999999999999999999988899999999999999999
Q ss_pred cCCCCCCCcccccccCCccccccC
Q 002887 468 NLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 468 ~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
++++..+..+..+++++.|+++.+
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTC
T ss_pred cCCcCCHhHhCCCccCCEEECCCC
Confidence 999644445888999999888743
No 310
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.58 E-value=3.1e-08 Score=117.46 Aligned_cols=107 Identities=15% Similarity=0.068 Sum_probs=87.7
Q ss_pred CCCCCCCCCCCCccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcC
Q 002887 384 WQGDPCAPKVYMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQ 457 (870)
Q Consensus 384 w~~~pC~~~~~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~ 457 (870)
|.+.+|.. ...+.-|+|++.+ ..+..++.|+|++|+|++..|..|++|++|++|+|++|++++..|..|++++
T Consensus 3 ~~~~~C~~-~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 81 (606)
T 3t6q_A 3 SSDQKCIE-KEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQH 81 (606)
T ss_dssp ---CCCEE-EETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCT
T ss_pred cccCceec-ccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCcc
Confidence 45556631 1235568898632 3456889999999999988889999999999999999999998899999999
Q ss_pred CCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 458 SLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 458 ~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+|+.|+|++|++++..|..++.+++|+.|+++.+
T Consensus 82 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 115 (606)
T 3t6q_A 82 RLDTLVLTANPLIFMAETALSGPKALKHLFFIQT 115 (606)
T ss_dssp TCCEEECTTCCCSEECTTTTSSCTTCCEEECTTS
T ss_pred ccCeeeCCCCcccccChhhhcccccccEeecccc
Confidence 9999999999999999999999999998888754
No 311
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.58 E-value=3.2e-08 Score=102.87 Aligned_cols=93 Identities=15% Similarity=0.125 Sum_probs=77.6
Q ss_pred eecCCCC---CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCc-CCCCCCccccCcCCCCeEEecC-CcCCCCC
Q 002887 399 INCSYDA---NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNS-LTGPVPEFLAELQSLRVLNLSG-NNLQGSL 473 (870)
Q Consensus 399 v~C~~~~---~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l~~L~~L~ls~-N~l~g~i 473 (870)
|.|..-. ..+..++.|+|++|+|++..+..|+++++|++|+|++|+ +++..|..|.++++|+.|+|++ |++++..
T Consensus 18 v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 18 VTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp EEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred eEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 4496411 134579999999999997777789999999999999997 8865566899999999999999 9999777
Q ss_pred CCcccccccCCccccccC
Q 002887 474 PSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 474 p~~l~~~~~~~~l~~~~~ 491 (870)
|..+..+++++.|+++.+
T Consensus 98 ~~~f~~l~~L~~L~l~~n 115 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNT 115 (239)
T ss_dssp TTSEECCTTCCEEEEEEE
T ss_pred HHHhCCCCCCCEEeCCCC
Confidence 778899999999988744
No 312
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.57 E-value=6.9e-08 Score=95.52 Aligned_cols=77 Identities=21% Similarity=0.209 Sum_probs=68.8
Q ss_pred EEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887 412 ISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 412 ~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+.|++++|+|+ .||..+. ++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..+..+..+++|+.|+++.|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57999999995 8999875 89999999999999999999999999999999999999755556789999999988743
No 313
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.57 E-value=2.9e-08 Score=120.44 Aligned_cols=78 Identities=22% Similarity=0.313 Sum_probs=56.6
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
..|+.|+|++|.|+ .||..|++|++|++|+|++|+|+ .||..|++|++|+.|+|++|+|+ .||..++.+++|..|++
T Consensus 247 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 247 DFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 45667777777777 77777777777777777777777 67777777777777777777775 67777777777776666
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 324 ~ 324 (727)
T 4b8c_D 324 E 324 (727)
T ss_dssp T
T ss_pred C
Confidence 5
No 314
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.56 E-value=7.9e-08 Score=94.66 Aligned_cols=78 Identities=23% Similarity=0.226 Sum_probs=69.7
Q ss_pred EEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccccc
Q 002887 411 IISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSV 490 (870)
Q Consensus 411 l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~ 490 (870)
.+.|++++|+|+ .||..+. ++|++|+|++|+|++..|..|+++++|+.|+|++|+|++..|..+..+++|+.|+++.
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 357999999999 6898774 8999999999999999899999999999999999999977776778999999998874
Q ss_pred C
Q 002887 491 D 491 (870)
Q Consensus 491 ~ 491 (870)
|
T Consensus 88 N 88 (170)
T 3g39_A 88 N 88 (170)
T ss_dssp S
T ss_pred C
Confidence 4
No 315
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.55 E-value=6.2e-08 Score=104.54 Aligned_cols=89 Identities=24% Similarity=0.189 Sum_probs=70.9
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccc-cCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKV-KNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~-~~~~l 486 (870)
.++++.|+|++|+|++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++.+|..+..++ ++..|
T Consensus 174 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 253 (306)
T 2z66_A 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 253 (306)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEE
T ss_pred CcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEE
Confidence 45788888888888887788888888888888888888877676788888888888888888888888888774 67776
Q ss_pred ccccCCCCCCCC
Q 002887 487 SLSVDGNRNLCP 498 (870)
Q Consensus 487 ~~~~~~n~~lc~ 498 (870)
+++ +|+..|.
T Consensus 254 ~L~--~N~~~~~ 263 (306)
T 2z66_A 254 NLT--QNDFACT 263 (306)
T ss_dssp ECT--TCCEECS
T ss_pred Ecc--CCCeecc
Confidence 665 6665553
No 316
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.54 E-value=1.6e-08 Score=120.94 Aligned_cols=84 Identities=13% Similarity=0.256 Sum_probs=75.5
Q ss_pred CCcEEEEEcCCCCCccc-----------------Cccccc--ccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 408 SPRIISINLSSSGIAGD-----------------IVPYIF--SLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~-----------------ip~~~~--~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.++++.|+|++|.|+|. ||.+++ +|++|++|+|++|+++|.+|..|++|++|+.|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46889999999999996 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCCccccc------ccCCccccccC
Q 002887 469 -LQG-SLPSGLSEK------VKNGSLSLSVD 491 (870)
Q Consensus 469 -l~g-~ip~~l~~~------~~~~~l~~~~~ 491 (870)
|+| .+|..++.+ ++++.|+++.+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 999 899988876 88888887743
No 317
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.54 E-value=3.7e-08 Score=99.34 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=54.6
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|++++..|..|++|++|++|+|++|++++.+|..++.+++|+.|+|++|++.+.+| .+..+++|+.|++
T Consensus 88 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l 166 (197)
T 4ezg_A 88 SNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNI 166 (197)
T ss_dssp TTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEEC
T ss_pred CCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEEC
Confidence 466677777777776666677777777777777777776666667777777777777776444555 5666666666666
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 167 ~ 167 (197)
T 4ezg_A 167 Q 167 (197)
T ss_dssp T
T ss_pred C
Confidence 5
No 318
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.53 E-value=7.6e-08 Score=116.80 Aligned_cols=81 Identities=32% Similarity=0.384 Sum_probs=76.6
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
...++.|+|++|.|. .||..+++|++|++|+|++|+|+ .||..|++|++|+.|+|++|+|+ .||..++.+.+|..|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 467899999999999 99999999999999999999999 99999999999999999999999 8999999999999999
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.|
T Consensus 300 L~~N 303 (727)
T 4b8c_D 300 FFDN 303 (727)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 8744
No 319
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.52 E-value=7.8e-08 Score=109.71 Aligned_cols=87 Identities=22% Similarity=0.207 Sum_probs=52.2
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|.|++..|..++++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++++.|++
T Consensus 323 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 402 (455)
T 3v47_A 323 THLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWL 402 (455)
T ss_dssp TTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEc
Confidence 45666666666666555566666666666666666666666666666666666666666666544444555666665555
Q ss_pred ccCCCCCCC
Q 002887 489 SVDGNRNLC 497 (870)
Q Consensus 489 ~~~~n~~lc 497 (870)
+ +|+..|
T Consensus 403 ~--~N~l~~ 409 (455)
T 3v47_A 403 H--TNPWDC 409 (455)
T ss_dssp C--SSCBCC
T ss_pred c--CCCccc
Confidence 4 454444
No 320
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.52 E-value=1.1e-07 Score=101.08 Aligned_cols=79 Identities=22% Similarity=0.190 Sum_probs=33.2
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
.++.|+|++|++++..|..++++++|++|+|++|+|++..|..++.+++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 110 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 110 NLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEEC
Confidence 3444444444444333333444444444444444444333333344444444444444444333333344444444433
No 321
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.51 E-value=6.2e-08 Score=110.41 Aligned_cols=89 Identities=18% Similarity=0.115 Sum_probs=81.3
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
..+++.|+|++|.|++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+++++.|+
T Consensus 206 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 285 (440)
T 3zyj_A 206 LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIH 285 (440)
T ss_dssp CSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEE
T ss_pred CcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEE
Confidence 45899999999999999999999999999999999999999999999999999999999999977777788899998877
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 286 L~--~Np~~Cd 294 (440)
T 3zyj_A 286 LH--HNPWNCN 294 (440)
T ss_dssp CC--SSCEECS
T ss_pred cC--CCCccCC
Confidence 76 8888775
No 322
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.51 E-value=6.7e-08 Score=110.55 Aligned_cols=89 Identities=19% Similarity=0.094 Sum_probs=81.1
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..+++++.|+
T Consensus 217 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 296 (452)
T 3zyi_A 217 LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELH 296 (452)
T ss_dssp CTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEE
T ss_pred cccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEE
Confidence 45899999999999999999999999999999999999999999999999999999999999977777788899888877
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 297 L~--~Np~~Cd 305 (452)
T 3zyi_A 297 LH--HNPWNCD 305 (452)
T ss_dssp CC--SSCEECS
T ss_pred cc--CCCcCCC
Confidence 76 8887775
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.51 E-value=7.4e-08 Score=114.33 Aligned_cols=83 Identities=20% Similarity=0.153 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|+|++..|..|++|++|++|+|++|.|++..|..|++|++|+.|+|++|+|++..|..++.+++|..|++
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 45677788888888777777888888888888888888777777788888888888888887444444577777777777
Q ss_pred ccC
Q 002887 489 SVD 491 (870)
Q Consensus 489 ~~~ 491 (870)
+.+
T Consensus 155 s~N 157 (597)
T 3oja_B 155 SNN 157 (597)
T ss_dssp CSS
T ss_pred eCC
Confidence 644
No 324
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.51 E-value=6.3e-08 Score=114.00 Aligned_cols=77 Identities=27% Similarity=0.392 Sum_probs=71.5
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
.++.|+|++|+|++ ||. |++|++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|++ +| .++.+++|..|+++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999996 786 999999999999999999 999999999999999999999997 78 89999999999887
Q ss_pred cC
Q 002887 490 VD 491 (870)
Q Consensus 490 ~~ 491 (870)
.|
T Consensus 517 ~N 518 (567)
T 1dce_A 517 NN 518 (567)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.51 E-value=1.3e-07 Score=100.29 Aligned_cols=89 Identities=21% Similarity=0.211 Sum_probs=74.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.|++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++++.|+
T Consensus 132 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEE
Confidence 46899999999999965555689999999999999999977677789999999999999999976666688888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 212 l~--~N~~~c~ 220 (270)
T 2o6q_A 212 LQ--ENPWDCT 220 (270)
T ss_dssp CC--SSCBCCS
T ss_pred ec--CCCeeCC
Confidence 65 7877665
No 326
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.51 E-value=3.6e-08 Score=107.03 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=68.1
Q ss_pred CcEEEEEcCCCCCcccCcccc--cccCcccccccccCcCCCCCCccccCc-----CCCCeEEecCCcCCCCCCCcccccc
Q 002887 409 PRIISINLSSSGIAGDIVPYI--FSLTSIESLDLSKNSLTGPVPEFLAEL-----QSLRVLNLSGNNLQGSLPSGLSEKV 481 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~--~~l~~L~~L~Ls~N~l~g~iP~~~~~l-----~~L~~L~ls~N~l~g~ip~~l~~~~ 481 (870)
.+++.|+|++|+++|.+|..+ +++++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 478888888888888888886 8888888888888888877 8877777 8888888888888887778888888
Q ss_pred cCCcccccc
Q 002887 482 KNGSLSLSV 490 (870)
Q Consensus 482 ~~~~l~~~~ 490 (870)
+++.|+++.
T Consensus 174 ~L~~L~Ls~ 182 (312)
T 1wwl_A 174 ALSTLDLSD 182 (312)
T ss_dssp SCCEEECCS
T ss_pred CCCEEECCC
Confidence 888888773
No 327
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.50 E-value=4.7e-08 Score=104.38 Aligned_cols=89 Identities=22% Similarity=0.210 Sum_probs=72.1
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..+.++++|+.|+|++|++++..|..++++++|+.|+|++|++++..|..+..+++++.|+
T Consensus 152 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 231 (285)
T 1ozn_A 152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR 231 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEe
Confidence 45788899999988865555688889999999999999888888888889999999999999876666688888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 232 l~--~N~~~c~ 240 (285)
T 1ozn_A 232 LN--DNPWVCD 240 (285)
T ss_dssp CC--SSCEECS
T ss_pred cc--CCCccCC
Confidence 65 6766554
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.50 E-value=1.3e-07 Score=101.67 Aligned_cols=88 Identities=24% Similarity=0.268 Sum_probs=66.7
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+|+ .+|..+..+.++..|.
T Consensus 123 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~ 201 (290)
T 1p9a_G 123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAF 201 (290)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEE
T ss_pred CCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEE
Confidence 357888888888888655556778888888888888888544455677888888888888888 7888887777777665
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 202 L~--~Np~~C~ 210 (290)
T 1p9a_G 202 LH--GNPWLCN 210 (290)
T ss_dssp CC--SCCBCCS
T ss_pred eC--CCCccCc
Confidence 54 7877775
No 329
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.50 E-value=6.2e-08 Score=94.84 Aligned_cols=81 Identities=23% Similarity=0.215 Sum_probs=46.9
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCC-CCccccCcCCCCeEEecCCcCCCCCC---CcccccccCC
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGP-VPEFLAELQSLRVLNLSGNNLQGSLP---SGLSEKVKNG 484 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~-iP~~~~~l~~L~~L~ls~N~l~g~ip---~~l~~~~~~~ 484 (870)
++++.|+|++|.+++.+|..+.++++|++|+|++|++++. .+..+..+++|+.|+|++|++++..+ ..+..+++++
T Consensus 71 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~ 150 (168)
T 2ell_A 71 PKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLT 150 (168)
T ss_dssp SSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCC
T ss_pred CCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCc
Confidence 4566666666666655555555566666666666666542 12455666666666666666664333 2555566666
Q ss_pred ccccc
Q 002887 485 SLSLS 489 (870)
Q Consensus 485 ~l~~~ 489 (870)
.|+++
T Consensus 151 ~L~l~ 155 (168)
T 2ell_A 151 YLDGY 155 (168)
T ss_dssp EETTE
T ss_pred EecCC
Confidence 55554
No 330
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.49 E-value=6.9e-08 Score=106.24 Aligned_cols=77 Identities=16% Similarity=0.181 Sum_probs=70.8
Q ss_pred EEEcCCC-CCcccCcccccccCccccccccc-CcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccccc
Q 002887 413 SINLSSS-GIAGDIVPYIFSLTSIESLDLSK-NSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSV 490 (870)
Q Consensus 413 ~l~L~~n-~l~G~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~ 490 (870)
.++++++ +|+ .||. |..+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..+..+++|..|+++.
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3589998 898 5999 99999999999996 999988888999999999999999999999999999999999999885
Q ss_pred C
Q 002887 491 D 491 (870)
Q Consensus 491 ~ 491 (870)
|
T Consensus 90 N 90 (347)
T 2ifg_A 90 N 90 (347)
T ss_dssp S
T ss_pred C
Confidence 4
No 331
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=2.8e-08 Score=122.22 Aligned_cols=84 Identities=17% Similarity=0.235 Sum_probs=74.3
Q ss_pred CCcEEEEEcCCCCCcc-----------------cCccccc--ccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 408 SPRIISINLSSSGIAG-----------------DIVPYIF--SLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G-----------------~ip~~~~--~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.++++.|+|++|.|+| .||++++ +|++|++|+|++|+++|.+|..|++|++|+.|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4688999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCCcccccc-------cCCccccccC
Q 002887 469 -LQG-SLPSGLSEKV-------KNGSLSLSVD 491 (870)
Q Consensus 469 -l~g-~ip~~l~~~~-------~~~~l~~~~~ 491 (870)
|+| .+|..++.+. +|+.|+++.+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N 558 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYN 558 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCC
Confidence 999 8998887776 7888777643
No 332
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.46 E-value=9.8e-08 Score=105.88 Aligned_cols=83 Identities=23% Similarity=0.183 Sum_probs=60.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
..+++.|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 34677777777777766666677777777777777777766666677777777777777777766677777777777776
Q ss_pred ccc
Q 002887 488 LSV 490 (870)
Q Consensus 488 ~~~ 490 (870)
++.
T Consensus 143 L~~ 145 (361)
T 2xot_A 143 LSQ 145 (361)
T ss_dssp CCS
T ss_pred CCC
Confidence 663
No 333
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.45 E-value=1.5e-07 Score=113.16 Aligned_cols=97 Identities=22% Similarity=0.241 Sum_probs=75.2
Q ss_pred CccceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc
Q 002887 395 MWQGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN 468 (870)
Q Consensus 395 ~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~ 468 (870)
.++-|.|+..+ ..+.+++.|+|++|++++..+..|+++++|++|+|++|++++..|..+++|++|+.|+|++|+
T Consensus 5 ~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 5 SHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp BSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred ECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 56778887532 234678899999999987777778888888888888888888888888888888888888888
Q ss_pred CCCCCCCcccccccCCccccccC
Q 002887 469 LQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 469 l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
+++..+..++.+++|+.|+++.+
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n 107 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSN 107 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSS
T ss_pred cCccChhhhccCCCCCEEECCCC
Confidence 88544446777777777777644
No 334
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.43 E-value=1.1e-07 Score=112.79 Aligned_cols=81 Identities=22% Similarity=0.223 Sum_probs=42.8
Q ss_pred CcEEEEEcCCCCCccc-CcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIAGD-IVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
++++.|+|++|.+++. +|..++++++|+.|+|++|++++.+|..++++++|+.|+|++|++++.+|..+..+++++.|+
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 527 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLD 527 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEE
Confidence 3455555555555552 444455555555555555555555555555555555555555555555555555555555544
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 528 l~ 529 (606)
T 3vq2_A 528 CS 529 (606)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 335
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.43 E-value=1.3e-07 Score=111.02 Aligned_cols=89 Identities=20% Similarity=0.241 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCCCCc-ccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIA-GDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~-G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
.++++.|+|++|.++ |.+|..+..+++|+.|+|++|++++..|..++++++|+.|+|++|++++.+|..+..+++++.|
T Consensus 444 l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 523 (570)
T 2z63_A 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKI 523 (570)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEE
Confidence 346677777777776 5677777777777777777777777667777777777777777777776666667777777666
Q ss_pred ccccCCCCCCCC
Q 002887 487 SLSVDGNRNLCP 498 (870)
Q Consensus 487 ~~~~~~n~~lc~ 498 (870)
+++ +|+..|.
T Consensus 524 ~l~--~N~~~~~ 533 (570)
T 2z63_A 524 WLH--TNPWDCS 533 (570)
T ss_dssp ECC--SSCBCCC
T ss_pred Eec--CCcccCC
Confidence 655 5555443
No 336
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.43 E-value=8.2e-08 Score=94.89 Aligned_cols=78 Identities=19% Similarity=0.127 Sum_probs=54.2
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCC--cccccccCCcc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPS--GLSEKVKNGSL 486 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~--~l~~~~~~~~l 486 (870)
+.++.|+|++|+|++. +.|++|++|++|+|++|+|++..|..++.+++|+.|+|++|+++ .+|. .+..++++..|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 3677777777777754 56777777777777777777543343477777777777777774 5665 66677777766
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 119 ~l~ 121 (176)
T 1a9n_A 119 CIL 121 (176)
T ss_dssp ECC
T ss_pred Eec
Confidence 665
No 337
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.41 E-value=1.8e-07 Score=110.03 Aligned_cols=92 Identities=25% Similarity=0.267 Sum_probs=78.9
Q ss_pred cceecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCC
Q 002887 397 QGINCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQ 470 (870)
Q Consensus 397 ~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~ 470 (870)
.-++|++.. ..++.++.|+|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|||++|+|+
T Consensus 34 ~~l~ls~~~L~~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 113 (562)
T 3a79_B 34 SMVDYSNRNLTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ 113 (562)
T ss_dssp CEEECTTSCCCSCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred cEEEcCCCCCccCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC
Confidence 567887532 23468999999999999888889999999999999999999888999999999999999999998
Q ss_pred CCCCCcccccccCCccccccC
Q 002887 471 GSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 471 g~ip~~l~~~~~~~~l~~~~~ 491 (870)
.+|.. .+++|+.|+++.+
T Consensus 114 -~lp~~--~l~~L~~L~Ls~N 131 (562)
T 3a79_B 114 -NISCC--PMASLRHLDLSFN 131 (562)
T ss_dssp -EECSC--CCTTCSEEECCSS
T ss_pred -ccCcc--ccccCCEEECCCC
Confidence 78877 7888888888744
No 338
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.41 E-value=2.7e-07 Score=97.94 Aligned_cols=81 Identities=22% Similarity=0.251 Sum_probs=59.3
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC-CCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG-SLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g-~ip~~l~~~~~~~~l~ 487 (870)
++++.|+|++|.|++..|..|.++++|++|+|++|++++..+..++++++|+.|+|++|++++ .+|..+..+++++.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~ 155 (276)
T 2z62_A 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLD 155 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEE
T ss_pred cCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEE
Confidence 467777777777776666677777777777777777776666567777777777777777775 3677777777777776
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 156 Ls 157 (276)
T 2z62_A 156 LS 157 (276)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 339
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.41 E-value=1.6e-07 Score=116.15 Aligned_cols=82 Identities=18% Similarity=0.124 Sum_probs=43.1
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
+++++.|+|++|.|++..|..|++|++|++|+|++|.+.+.| |..|++|++|++|+|++|++++..|..+..+++|+.|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 345666666666666555555555555555555555444444 3444555555555555555554445555555544444
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 103 ~Ls 105 (844)
T 3j0a_A 103 RLY 105 (844)
T ss_dssp ECT
T ss_pred eCc
Confidence 444
No 340
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.40 E-value=3e-07 Score=98.69 Aligned_cols=82 Identities=22% Similarity=0.226 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 99 l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (290)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEE
Confidence 35678888888888866666788888888888888888866666677888888888888888844444556677777777
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 179 L~ 180 (290)
T 1p9a_G 179 LQ 180 (290)
T ss_dssp CC
T ss_pred CC
Confidence 76
No 341
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.39 E-value=1.8e-07 Score=100.83 Aligned_cols=84 Identities=21% Similarity=0.196 Sum_probs=73.8
Q ss_pred CCcEEEEEcCCCCCcc-cCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAG-DIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G-~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
.+.++.|+|++|.+++ .+|..+.++++|++|+|++|++++..|..+.++++|+.|+|++|++++..+..+..+++++.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 4578999999999988 678889999999999999999998888899999999999999999997777788888899988
Q ss_pred ccccC
Q 002887 487 SLSVD 491 (870)
Q Consensus 487 ~~~~~ 491 (870)
+++.+
T Consensus 229 ~L~~N 233 (306)
T 2z66_A 229 DYSLN 233 (306)
T ss_dssp ECTTS
T ss_pred ECCCC
Confidence 88744
No 342
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.38 E-value=1.1e-07 Score=112.71 Aligned_cols=86 Identities=29% Similarity=0.308 Sum_probs=51.6
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|++++..|..|+++++|+.|+|++|++++.+|..+.++++| .|+|++|++++.+|..+..+++++.|++
T Consensus 476 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l 554 (606)
T 3t6q_A 476 GRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINL 554 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEEC
T ss_pred CCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeC
Confidence 455566666666665556666666666666666666666666666666666 6666666666555555555555555544
Q ss_pred ccCCCCCCC
Q 002887 489 SVDGNRNLC 497 (870)
Q Consensus 489 ~~~~n~~lc 497 (870)
+ +|+..|
T Consensus 555 ~--~N~~~c 561 (606)
T 3t6q_A 555 R--QNPLDC 561 (606)
T ss_dssp T--TCCEEC
T ss_pred C--CCCccc
Confidence 4 555544
No 343
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.37 E-value=9.8e-08 Score=96.21 Aligned_cols=82 Identities=21% Similarity=0.235 Sum_probs=71.5
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|.++ .++.+.++++|++|+|++|++++..|..++.|++|+.|+|++|++++..|..++.+++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 357899999999664 445899999999999999999988888999999999999999999988888899999999888
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 143 L~~n 146 (197)
T 4ezg_A 143 LSYN 146 (197)
T ss_dssp CCSC
T ss_pred ccCC
Confidence 8744
No 344
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.37 E-value=2.6e-07 Score=99.99 Aligned_cols=81 Identities=20% Similarity=0.109 Sum_probs=59.3
Q ss_pred cEEEEEcCCCCCcccCcccc--cccCcccccccccCcCCCCCC----ccccCcCCCCeEEecCCcCCCCCCCcccccccC
Q 002887 410 RIISINLSSSGIAGDIVPYI--FSLTSIESLDLSKNSLTGPVP----EFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKN 483 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~--~~l~~L~~L~Ls~N~l~g~iP----~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~ 483 (870)
+++.|+|++|+++|.+|..+ +++++|++|+|++|++++.+| ..+..+++|+.|+|++|++++..|..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 47777777777777777777 777777777777777777666 334567777777777777777777777777777
Q ss_pred Ccccccc
Q 002887 484 GSLSLSV 490 (870)
Q Consensus 484 ~~l~~~~ 490 (870)
+.|+++.
T Consensus 172 ~~L~Ls~ 178 (310)
T 4glp_A 172 TSLDLSD 178 (310)
T ss_dssp CEEECCS
T ss_pred CEEECCC
Confidence 7777763
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.36 E-value=1.9e-07 Score=103.11 Aligned_cols=97 Identities=14% Similarity=0.140 Sum_probs=81.6
Q ss_pred CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCc-cccCcCCCCe-EEe
Q 002887 394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPE-FLAELQSLRV-LNL 464 (870)
Q Consensus 394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~-L~l 464 (870)
|.|..|.|++.+ ..+..++.|+|++|+|+ .||+ .|.+|++|++|+|++|++.+.||. .|.+|++|+. +++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 689999998632 23457899999999999 6665 689999999999999999988885 5788988775 777
Q ss_pred cCCcCCCCCCCcccccccCCccccccC
Q 002887 465 SGNNLQGSLPSGLSEKVKNGSLSLSVD 491 (870)
Q Consensus 465 s~N~l~g~ip~~l~~~~~~~~l~~~~~ 491 (870)
++|+|++..|..+..+++|+.|+++.+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n 114 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNT 114 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEE
T ss_pred cCCcccccCchhhhhcccccccccccc
Confidence 889999877888999999999988754
No 346
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.35 E-value=3e-07 Score=100.36 Aligned_cols=81 Identities=26% Similarity=0.324 Sum_probs=72.3
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|.+++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+++ .+|..+..+++++.|++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 270 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYL 270 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEEC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEEC
Confidence 57889999999999888888999999999999999999888888899999999999999998 88988988888888887
Q ss_pred cc
Q 002887 489 SV 490 (870)
Q Consensus 489 ~~ 490 (870)
+.
T Consensus 271 ~~ 272 (330)
T 1xku_A 271 HN 272 (330)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 347
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.34 E-value=3e-07 Score=105.73 Aligned_cols=89 Identities=26% Similarity=0.226 Sum_probs=75.6
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|.|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 326 (477)
T 2id5_A 247 LVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326 (477)
T ss_dssp CTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEE
T ss_pred ccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEE
Confidence 35788999999999987777899999999999999999988899999999999999999999976666778888888777
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|.
T Consensus 327 l~--~N~l~c~ 335 (477)
T 2id5_A 327 LD--SNPLACD 335 (477)
T ss_dssp CC--SSCEECS
T ss_pred cc--CCCccCc
Confidence 65 7776664
No 348
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.33 E-value=3.5e-07 Score=107.39 Aligned_cols=85 Identities=20% Similarity=0.131 Sum_probs=68.6
Q ss_pred CCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 407 QSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 407 ~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
.+..++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..+..+.+|+.|
T Consensus 26 l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 26 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp SCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred ccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 34578888888888887777788888888888888888887777778888888888888888887777788888888877
Q ss_pred ccccC
Q 002887 487 SLSVD 491 (870)
Q Consensus 487 ~~~~~ 491 (870)
+++.+
T Consensus 106 ~L~~n 110 (570)
T 2z63_A 106 VAVET 110 (570)
T ss_dssp ECTTS
T ss_pred ccccc
Confidence 77644
No 349
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.32 E-value=3.1e-07 Score=100.36 Aligned_cols=81 Identities=21% Similarity=0.258 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|.+++..|..+.++++|+.|+|++|++++..|..++.+++|+.|+|++|+++ .+|..+..+++++.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 47888999999999888888999999999999999999887878889999999999999998 88888888888888887
Q ss_pred cc
Q 002887 489 SV 490 (870)
Q Consensus 489 ~~ 490 (870)
+.
T Consensus 272 ~~ 273 (332)
T 2ft3_A 272 HT 273 (332)
T ss_dssp CS
T ss_pred CC
Confidence 73
No 350
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.32 E-value=5e-07 Score=107.20 Aligned_cols=84 Identities=18% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|.|++..|..|++|++|++|+|++|.|++..|..|+++++|+.|+|++|+|++..|..++.+++|..|+
T Consensus 98 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 177 (597)
T 3oja_B 98 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 177 (597)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEE
Confidence 45788888888888887777788888888888888888854445568888888888888888888888888888888887
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 178 L~~N 181 (597)
T 3oja_B 178 LSSN 181 (597)
T ss_dssp CTTS
T ss_pred CcCC
Confidence 7643
No 351
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.32 E-value=3.2e-07 Score=107.29 Aligned_cols=84 Identities=30% Similarity=0.320 Sum_probs=63.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC-CCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG-SLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g-~ip~~l~~~~~~~~l 486 (870)
.++++.|+|++|++++..|..|++|++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..+..+++++.|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 3567778888888887777778888888888888888887666667778888888888888776 466777777777777
Q ss_pred ccccC
Q 002887 487 SLSVD 491 (870)
Q Consensus 487 ~~~~~ 491 (870)
+++.+
T Consensus 129 ~L~~n 133 (549)
T 2z81_A 129 RIGNV 133 (549)
T ss_dssp EEEES
T ss_pred ECCCC
Confidence 77643
No 352
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.31 E-value=1.3e-07 Score=102.63 Aligned_cols=81 Identities=22% Similarity=0.228 Sum_probs=70.4
Q ss_pred CCcEEEEEcCCCCCcccCccccccc-----CcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCC--CCCcc--c
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSL-----TSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGS--LPSGL--S 478 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l-----~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~--ip~~l--~ 478 (870)
.++++.|+|++|+|++. |..++++ ++|++|+|++|++++..|..|+.+++|+.|+|++|+++|. +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 46899999999999987 8888888 9999999999999988889999999999999999999876 34455 7
Q ss_pred ccccCCccccc
Q 002887 479 EKVKNGSLSLS 489 (870)
Q Consensus 479 ~~~~~~~l~~~ 489 (870)
.+++++.|+++
T Consensus 199 ~l~~L~~L~L~ 209 (312)
T 1wwl_A 199 KFPTLQVLALR 209 (312)
T ss_dssp SCTTCCEEECT
T ss_pred cCCCCCEEECC
Confidence 78888888876
No 353
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.31 E-value=2.3e-07 Score=107.90 Aligned_cols=78 Identities=22% Similarity=0.183 Sum_probs=41.9
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC-CCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG-SLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g-~ip~~l~~~~~~~~l~ 487 (870)
++++.|+|++|+|++..|..|++|++|++|+|++|+|+ .||.. .+++|++|+|++|++++ .+|..++.+++|+.|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~ 121 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLG 121 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEE
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEE
Confidence 34555555555555544555555555555555555555 34544 45555555555555554 3555555555555555
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 122 L~ 123 (520)
T 2z7x_B 122 LS 123 (520)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 354
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.31 E-value=3e-06 Score=92.20 Aligned_cols=131 Identities=20% Similarity=0.213 Sum_probs=97.9
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhcc---c-cceeEEEEEecCCeEEEEEEEccCCc
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH---K-NLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H---~-nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
+.++.|....||+. ++.+++|+..... ....+.+|.+++..+.+ + .+.+++++ +..++||||++|.+
T Consensus 43 ~~l~~G~~n~vy~v---g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 43 RYLSSGDDSDTFLC---NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred EeCCCCCCceEEEE---CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 57899999999998 7788888864432 23558999999999976 1 23445554 45689999999988
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCC-------------------------------------------
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCK------------------------------------------- 679 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~------------------------------------------- 679 (870)
+..... ..++..++..++.++++.|+.||+...
T Consensus 114 l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (320)
T 3r70_A 114 ITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHI 189 (320)
T ss_dssp CCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred cccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHH
Confidence 864321 235566677788888888888885421
Q ss_pred -----------------CCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 680 -----------------PPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 680 -----------------~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 190 ~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 190 ETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999976679999998864
No 355
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.30 E-value=3.4e-07 Score=106.42 Aligned_cols=78 Identities=26% Similarity=0.221 Sum_probs=43.3
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|++++..|..|.+|++|++|+|++|++++..|..|++|++|++|||++|+++ .||.. .+++|+.|++
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 35555555555555555555555555555555555555555555555555555555555555 45544 4555555555
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 98 ~ 98 (520)
T 2z7x_B 98 S 98 (520)
T ss_dssp C
T ss_pred c
Confidence 4
No 356
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.28 E-value=4e-07 Score=105.29 Aligned_cols=85 Identities=21% Similarity=0.194 Sum_probs=73.0
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|.|+|. +.+..+++|+.|+|++|+|+| +|..++.+++|+.|+|++|+|++ +|..+..++++..|+
T Consensus 168 l~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~ 243 (487)
T 3oja_A 168 SDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFD 243 (487)
T ss_dssp TTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEE
T ss_pred CCcccEEecCCCccccc--cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEE
Confidence 46899999999999976 345579999999999999997 55559999999999999999995 898899999988877
Q ss_pred cccCCCCCCCC
Q 002887 488 LSVDGNRNLCP 498 (870)
Q Consensus 488 ~~~~~n~~lc~ 498 (870)
++ +|+..|+
T Consensus 244 l~--~N~l~c~ 252 (487)
T 3oja_A 244 LR--GNGFHCG 252 (487)
T ss_dssp CT--TCCBCHH
T ss_pred cC--CCCCcCc
Confidence 75 7777664
No 357
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.28 E-value=3.5e-07 Score=90.31 Aligned_cols=79 Identities=22% Similarity=0.189 Sum_probs=69.5
Q ss_pred CCcEEEEEcCCCCCcccCccc-ccccCcccccccccCcCCCCCCc--cccCcCCCCeEEecCCcCCCCCCCc----cccc
Q 002887 408 SPRIISINLSSSGIAGDIVPY-IFSLTSIESLDLSKNSLTGPVPE--FLAELQSLRVLNLSGNNLQGSLPSG----LSEK 480 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~-~~~l~~L~~L~Ls~N~l~g~iP~--~~~~l~~L~~L~ls~N~l~g~ip~~----l~~~ 480 (870)
.++++.|+|++|.|++ +|+. ++.+++|++|+|++|+|+ .+|. .+..+++|+.|+|++|.++ .+|.. +..+
T Consensus 63 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l 139 (176)
T 1a9n_A 63 LRRLKTLLVNNNRICR-IGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKV 139 (176)
T ss_dssp CSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHC
T ss_pred CCCCCEEECCCCcccc-cCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHC
Confidence 4689999999999995 5555 599999999999999995 7887 8999999999999999998 67775 8889
Q ss_pred ccCCccccc
Q 002887 481 VKNGSLSLS 489 (870)
Q Consensus 481 ~~~~~l~~~ 489 (870)
++++.|+++
T Consensus 140 ~~L~~Ld~~ 148 (176)
T 1a9n_A 140 PQVRVLDFQ 148 (176)
T ss_dssp TTCSEETTE
T ss_pred CccceeCCC
Confidence 999988876
No 358
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.27 E-value=3.1e-07 Score=107.90 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=59.7
Q ss_pred CCCCCCCCCCccce-ecCCCCCCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEe
Q 002887 386 GDPCAPKVYMWQGI-NCSYDANQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNL 464 (870)
Q Consensus 386 ~~pC~~~~~~W~Gv-~C~~~~~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~l 464 (870)
++||.-....|.|+ .|.. .+++.|+|++|+|+| ||..+. ++|++|+|++|+|+ .|| +.+++|+.|+|
T Consensus 40 ~~~~~~~~~~~~~l~~C~~-----~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~L 107 (571)
T 3cvr_A 40 ALPGENRNEAVSLLKECLI-----NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDA 107 (571)
T ss_dssp CCTTCCHHHHHHHHHHHHH-----TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEEC
T ss_pred CCccccccchhhhcccccc-----CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEc
Confidence 56774322369998 6753 267778888888876 777663 67777777777777 677 34677777777
Q ss_pred cCCcCCCCCCCcccccccCCccccc
Q 002887 465 SGNNLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 465 s~N~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
++|+|++ ||. +.. +|..|+++
T Consensus 108 s~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 108 CDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp CSSCCSC-CCC-CCT--TCCEEECC
T ss_pred cCCCCCC-cch-hhc--CCCEEECC
Confidence 7777776 666 544 55666655
No 359
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.26 E-value=9.6e-07 Score=109.13 Aligned_cols=80 Identities=21% Similarity=0.145 Sum_probs=39.8
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCcc--ccCcCCCCeEEecCCcCCCCCC-CcccccccCCcc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEF--LAELQSLRVLNLSGNNLQGSLP-SGLSEKVKNGSL 486 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~--~~~l~~L~~L~ls~N~l~g~ip-~~l~~~~~~~~l 486 (870)
+++.|+|++|+|++..|..|++|++|++|+|++|++++.+|.. +++|++|+.|||++|++++..| ..++++++|+.|
T Consensus 74 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L 153 (844)
T 3j0a_A 74 NLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSI 153 (844)
T ss_dssp TCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEE
T ss_pred CCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEE
Confidence 4555555555555544555555555555555555555544433 4555555555555555544433 244445555444
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 154 ~Ls 156 (844)
T 3j0a_A 154 DFS 156 (844)
T ss_dssp EEE
T ss_pred ECC
Confidence 443
No 360
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.24 E-value=3e-06 Score=90.85 Aligned_cols=137 Identities=18% Similarity=0.153 Sum_probs=91.7
Q ss_pred ccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccc---cceeEEEEEecCCeEEEEEEEccCCc
Q 002887 567 RVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHK---NLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
+.|+.|.++.||++... |+.++||+...........|.+|++.|+.+++. .+.+++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 57999999999999876 788999997554333456789999999999875 477787764 3689999999987
Q ss_pred hhh-----------hhhhcccc-------------------cccHHHHHH--------------------HHHHHHHHHH
Q 002887 643 LQA-----------HLLEDKAD-------------------TLCWERRLQ--------------------IASESAQGLE 672 (870)
Q Consensus 643 L~~-----------~l~~~~~~-------------------~l~~~~~~~--------------------i~~~ia~aL~ 672 (870)
+.. .|+..... .-+|..... ....+-+.++
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 531 12211100 013432210 0111122233
Q ss_pred HHH----hCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887 673 YLH----NGCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709 (870)
Q Consensus 673 yLH----~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~ 709 (870)
.|. ....+.++|+|+.+.||+++++ .+.|+|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 332 2235689999999999999984 6889999 654
No 361
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.24 E-value=1.1e-06 Score=98.19 Aligned_cols=82 Identities=20% Similarity=0.195 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCcc-ccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEF-LAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~-~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
.+.++.|+|++|++++..|..|+++++|++|+|++|+++ .+|.. |+++++|+.|+|++|++++..|..+..+++++.|
T Consensus 92 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 92 AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 457888888888888777777888888888888888888 45544 5888888888888888887777778888888888
Q ss_pred cccc
Q 002887 487 SLSV 490 (870)
Q Consensus 487 ~~~~ 490 (870)
+++.
T Consensus 171 ~l~~ 174 (390)
T 3o6n_A 171 QLSS 174 (390)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7763
No 362
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.22 E-value=1e-06 Score=95.37 Aligned_cols=76 Identities=32% Similarity=0.416 Sum_probs=43.1
Q ss_pred CcEEEEEcCCCCCcccCccccccc---CcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSL---TSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGS 485 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l---~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~ 485 (870)
+.++.|+|++|.|++.+|+.++.+ ++|++|+|++|+|+ .||..+. ++|+.|||++|+|+|. |. +..+++++.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 355566666666666656655555 46666666666666 5565553 5666666666666642 22 344455555
Q ss_pred cccc
Q 002887 486 LSLS 489 (870)
Q Consensus 486 l~~~ 489 (870)
|+++
T Consensus 299 L~L~ 302 (310)
T 4glp_A 299 LTLD 302 (310)
T ss_dssp EECS
T ss_pred EECc
Confidence 5444
No 363
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.22 E-value=7.6e-07 Score=104.67 Aligned_cols=80 Identities=25% Similarity=0.224 Sum_probs=66.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCC-CCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQG-SLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g-~ip~~l~~~~~~~~l 486 (870)
.++++.|+|++|+|++..|..|++|++|++|+|++|+|+ .||.. .+++|+.|+|++|++++ ++|..++.+++|+.|
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L 151 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFL 151 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEE
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEE
Confidence 457888888888888877888888888888888888888 68876 78888888888888887 567888888888888
Q ss_pred cccc
Q 002887 487 SLSV 490 (870)
Q Consensus 487 ~~~~ 490 (870)
+++.
T Consensus 152 ~L~~ 155 (562)
T 3a79_B 152 GLSA 155 (562)
T ss_dssp EEEC
T ss_pred ecCC
Confidence 8774
No 364
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.22 E-value=1.1e-06 Score=98.25 Aligned_cols=79 Identities=27% Similarity=0.288 Sum_probs=42.0
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCc-ccccccCCcccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSG-LSEKVKNGSLSL 488 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~-l~~~~~~~~l~~ 488 (870)
+++.|+|++|++++..+..|+++++|++|+|++|++++..|..|+++++|+.|+|++|+++ .+|.. +..+++|+.|++
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEEC
Confidence 4455555555555444445555555555555555555555555555555555555555555 33333 345555555555
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 149 ~ 149 (390)
T 3o6n_A 149 S 149 (390)
T ss_dssp C
T ss_pred C
Confidence 4
No 365
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.20 E-value=5.6e-07 Score=95.01 Aligned_cols=78 Identities=26% Similarity=0.314 Sum_probs=66.0
Q ss_pred CCcEEEEEcCCCCCcc--cCcccccccCcccccccccCcCCCCCCccccCcC--CCCeEEecCCcCCCCCCC-------c
Q 002887 408 SPRIISINLSSSGIAG--DIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQ--SLRVLNLSGNNLQGSLPS-------G 476 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G--~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~--~L~~L~ls~N~l~g~ip~-------~ 476 (870)
.+.|+.|+|++|+|++ .+|..+..|++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|. .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 4689999999999998 7888899999999999999999975 4456666 999999999999998884 2
Q ss_pred ccccccCCccc
Q 002887 477 LSEKVKNGSLS 487 (870)
Q Consensus 477 l~~~~~~~~l~ 487 (870)
+..+++|..|+
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 56677777664
No 366
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.19 E-value=1e-06 Score=97.18 Aligned_cols=83 Identities=31% Similarity=0.297 Sum_probs=71.3
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCC--cccccccCCc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPS--GLSEKVKNGS 485 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~--~l~~~~~~~~ 485 (870)
.++++.|+|++|++++..|..|+++++|++|+|++|++++..+..++++++|+.|+|++|+++ .+|. .+..+++++.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 468999999999999888888999999999999999999644445899999999999999999 4665 7888999999
Q ss_pred cccccC
Q 002887 486 LSLSVD 491 (870)
Q Consensus 486 l~~~~~ 491 (870)
|+++.+
T Consensus 154 L~l~~n 159 (353)
T 2z80_A 154 LRVGNM 159 (353)
T ss_dssp EEEEES
T ss_pred EECCCC
Confidence 888744
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.19 E-value=6.7e-08 Score=97.52 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=48.4
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|+|++ +| .+.++++|++|+|++|+++ .+|..+..+++|+.|+|++|++++ +| .+..+++++.|++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 356666666666665 55 6666666666666666666 566666666666666666666664 44 4566666666655
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 123 ~ 123 (198)
T 1ds9_A 123 S 123 (198)
T ss_dssp S
T ss_pred C
Confidence 5
No 368
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.17 E-value=1.5e-05 Score=86.21 Aligned_cols=135 Identities=20% Similarity=0.173 Sum_probs=93.3
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccc---cceeEEEEEe-cCCeEEEEEEEccCCc
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHK---NLTILVGYCD-EGANMGLIYEFMANGN 642 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~-~~~~~~LV~Ey~~~gs 642 (870)
+.++.|....||+. +..+++|+-.. ......+.+|+++|..+.+. .+.+.+.++. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v---g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV---NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE---TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE---CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 45788999999987 67788888432 23456789999999999753 2556666664 4456789999999988
Q ss_pred hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC---------------------------------------------
Q 002887 643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNG--------------------------------------------- 677 (870)
Q Consensus 643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~--------------------------------------------- 677 (870)
+..... ..++..++..++.++++.|+.||+.
T Consensus 100 l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 100 LGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred Cchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 765321 1223344444555555555555532
Q ss_pred ------------CCCCceeCCCCCCCEEEcC---CCc-EEEEeccCCcc
Q 002887 678 ------------CKPPIVHRDVKSANILLNE---KFQ-AKLADFGLSRI 710 (870)
Q Consensus 678 ------------~~~~IvHrDLKp~NILld~---~~~-vkL~DFGla~~ 710 (870)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999998 455 48999998764
No 369
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.15 E-value=7.9e-06 Score=90.04 Aligned_cols=79 Identities=5% Similarity=-0.003 Sum_probs=57.3
Q ss_pred ccc-cccCcEEEEEEEEC--------CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhcc---ccceeEEEEEecC---
Q 002887 567 RVL-GKGGFGTVYHGYLD--------DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHH---KNLTILVGYCDEG--- 628 (870)
Q Consensus 567 ~~L-G~G~fG~Vy~~~~~--------~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H---~nIv~l~g~~~~~--- 628 (870)
+.| +.|....+|+.... ++.+++|+..... ......+.+|+.+++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88999999998765 6778888865432 1123567899999998853 2466788887665
Q ss_pred CeEEEEEEEccCCchhh
Q 002887 629 ANMGLIYEFMANGNLQA 645 (870)
Q Consensus 629 ~~~~LV~Ey~~~gsL~~ 645 (870)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 370
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.15 E-value=1.1e-06 Score=91.28 Aligned_cols=80 Identities=21% Similarity=0.318 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCC-CcccCcccccccCccccccccc-CcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCC-
Q 002887 408 SPRIISINLSSSG-IAGDIVPYIFSLTSIESLDLSK-NSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNG- 484 (870)
Q Consensus 408 ~~~l~~l~L~~n~-l~G~ip~~~~~l~~L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~- 484 (870)
.++++.|+|++|. +++..+..|.++++|++|+|++ |+|++..|..|.++++|+.|+|++|++++ +|. +..+.++.
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 3577888888886 6644444678888888888887 88886556677788888888888888875 676 66666666
Q ss_pred --ccccc
Q 002887 485 --SLSLS 489 (870)
Q Consensus 485 --~l~~~ 489 (870)
.|+++
T Consensus 132 L~~L~l~ 138 (239)
T 2xwt_C 132 FFILEIT 138 (239)
T ss_dssp EEEEEEE
T ss_pred ccEEECC
Confidence 66665
No 371
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.14 E-value=2e-06 Score=103.46 Aligned_cols=81 Identities=25% Similarity=0.246 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCccc--ccccCCcc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLS--EKVKNGSL 486 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~--~~~~~~~l 486 (870)
.+++.|+|++|++++..|..|++|++|++|+|++|++++..|..++++++|+.|+|++|++++..|..+. .+++++.|
T Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp TTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 4566666666666655555566666666666666666666666666666666666666666655554433 23555555
Q ss_pred ccc
Q 002887 487 SLS 489 (870)
Q Consensus 487 ~~~ 489 (870)
+++
T Consensus 177 ~L~ 179 (680)
T 1ziw_A 177 ELS 179 (680)
T ss_dssp ECT
T ss_pred ECC
Confidence 554
No 372
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.13 E-value=7.7e-08 Score=97.04 Aligned_cols=79 Identities=20% Similarity=0.300 Sum_probs=59.0
Q ss_pred cEEEEEcCCCCCcccCcc------cccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccC
Q 002887 410 RIISINLSSSGIAGDIVP------YIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKN 483 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~------~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~ 483 (870)
.++.++|+.+.|+|.+|. .++++++|++|+|++|++++ +| .+..+++|+.|+|++|+++ .+|..+..++++
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455566666677777666 78888888888888888876 77 6778888888888888887 677777777777
Q ss_pred CccccccC
Q 002887 484 GSLSLSVD 491 (870)
Q Consensus 484 ~~l~~~~~ 491 (870)
+.|+++.+
T Consensus 96 ~~L~L~~N 103 (198)
T 1ds9_A 96 EELWISYN 103 (198)
T ss_dssp SEEEEEEE
T ss_pred CEEECcCC
Confidence 77777644
No 373
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.13 E-value=1.3e-05 Score=84.44 Aligned_cols=134 Identities=19% Similarity=0.114 Sum_probs=95.2
Q ss_pred cccccCcE-EEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 568 VLGKGGFG-TVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 568 ~LG~G~fG-~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
.+..|..| .||+.... +..+.+|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34445554 68987654 567889986543 3456788999999884 33466788999888999999999999887
Q ss_pred hhhhhhcccccccHHHHHHHHHHHHHHHHHHHhC----------------------------------------------
Q 002887 644 QAHLLEDKADTLCWERRLQIASESAQGLEYLHNG---------------------------------------------- 677 (870)
Q Consensus 644 ~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~---------------------------------------------- 677 (870)
.+...... .....++.++++.|..||+.
T Consensus 108 ~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 66543211 12234556666666666642
Q ss_pred ---------CCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 678 ---------CKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 678 ---------~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
..+.++|+|+++.|||+++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999887778999998754
No 374
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.11 E-value=1.2e-06 Score=95.00 Aligned_cols=82 Identities=20% Similarity=0.156 Sum_probs=46.5
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|.|++. | ....+++|+.|+|++|++++ +|..+..+++|+.|+|++|+|+ .+|..+..+++++.|++
T Consensus 169 ~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l 244 (317)
T 3o53_A 169 DTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDL 244 (317)
T ss_dssp TTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEEC
T ss_pred CcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEc
Confidence 3556666666666533 2 23346666666666666663 4444666666666666666666 45666666666665555
Q ss_pred ccCCCCCC
Q 002887 489 SVDGNRNL 496 (870)
Q Consensus 489 ~~~~n~~l 496 (870)
+ +|+..
T Consensus 245 ~--~N~~~ 250 (317)
T 3o53_A 245 R--GNGFH 250 (317)
T ss_dssp T--TCCCB
T ss_pred c--CCCcc
Confidence 4 44433
No 375
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.09 E-value=1.7e-05 Score=87.95 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=90.6
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc--ceeEEEEEecC-CeEEEEEEEccCCch
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN--LTILVGYCDEG-ANMGLIYEFMANGNL 643 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~-~~~~LV~Ey~~~gsL 643 (870)
+.++.|....+|+....++.+++|+.... ..+..|+.++..+.... +.++++++... ...++||||+++..+
T Consensus 47 ~~l~gG~~n~~y~v~~~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDVGGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTL 121 (362)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEET
T ss_pred EECCCCCcceEEEEEECCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCc
Confidence 46889999999999888999999987543 25889999999986544 45677777654 568999999998766
Q ss_pred hhh------------------hhhcccc---------------cccHHHHH---------------------HHHHHHHH
Q 002887 644 QAH------------------LLEDKAD---------------TLCWERRL---------------------QIASESAQ 669 (870)
Q Consensus 644 ~~~------------------l~~~~~~---------------~l~~~~~~---------------------~i~~~ia~ 669 (870)
.+. |+..... .-+|...+ .....+..
T Consensus 122 ~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 201 (362)
T 3ovc_A 122 QDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDE 201 (362)
T ss_dssp TTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHH
Confidence 421 0000000 00111110 11111222
Q ss_pred HHHHHHhC-CCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 670 GLEYLHNG-CKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 670 aL~yLH~~-~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
.+.++... ..+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 202 l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 202 LMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 22233211 014689999999999999887788999998865
No 376
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.02 E-value=2.3e-06 Score=93.77 Aligned_cols=78 Identities=26% Similarity=0.304 Sum_probs=63.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.+++. +.+..+++|+.|+|++|++++..|..++.+++|+.|+|++|++++..| +..+++++.|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 45788888888888864 458888888888888888888888888888888888888888887666 77778888777
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 340 l~ 341 (347)
T 4fmz_A 340 FA 341 (347)
T ss_dssp SS
T ss_pred hh
Confidence 65
No 377
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.02 E-value=4.7e-06 Score=89.38 Aligned_cols=74 Identities=30% Similarity=0.383 Sum_probs=35.9
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
.++.|+|++|++++. +.++++++|+.|+|++|++++..| +..+++|+.|+|++|++++ +| .+..+++|..|+++
T Consensus 135 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~ 208 (291)
T 1h6t_A 135 QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELF 208 (291)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEE
T ss_pred CCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECc
Confidence 455555555555532 345555555555555555554322 4555555555555555543 33 24444444444443
No 378
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.00 E-value=4.4e-06 Score=88.20 Aligned_cols=75 Identities=24% Similarity=0.393 Sum_probs=64.1
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
..++.|+|++|+|++ ++ .++++++|+.|+|++|++++ +| .++.+++|+.|+|++|++++. ..+..+++++.|++
T Consensus 106 ~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l 179 (263)
T 1xeu_A 106 ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDL 179 (263)
T ss_dssp SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEE
T ss_pred CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeC
Confidence 578899999999986 44 69999999999999999996 45 688999999999999999976 67888888888877
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 180 ~ 180 (263)
T 1xeu_A 180 T 180 (263)
T ss_dssp E
T ss_pred C
Confidence 6
No 379
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=97.98 E-value=4.3e-06 Score=89.67 Aligned_cols=78 Identities=31% Similarity=0.428 Sum_probs=68.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|++++ + +.+.+|++|+.|+|++|++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 111 l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 111 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 4689999999999996 3 5799999999999999999975 578999999999999999997655 88899999988
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 185 L~~N 188 (291)
T 1h6t_A 185 LSKN 188 (291)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 8744
No 380
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=97.97 E-value=6.2e-06 Score=87.08 Aligned_cols=76 Identities=24% Similarity=0.279 Sum_probs=57.4
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.+.++.|+|++|+|++. |+ +++|++|+.|+|++|++++ +|... . ++|+.|+|++|++++ +| .+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TD-SLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC-Ch-hhcCcccccEEE
Confidence 35788888888888854 44 8888888888888888885 55533 3 888888888888886 33 577888888877
Q ss_pred ccc
Q 002887 488 LSV 490 (870)
Q Consensus 488 ~~~ 490 (870)
++.
T Consensus 135 Ls~ 137 (263)
T 1xeu_A 135 IRN 137 (263)
T ss_dssp CTT
T ss_pred CCC
Confidence 763
No 381
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.96 E-value=6.3e-06 Score=97.59 Aligned_cols=75 Identities=31% Similarity=0.412 Sum_probs=40.8
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++|+.|+|++|.|++. +.|++|++|+.|+|++|+|++..| +..|++|+.|+|++|+|++ +| .+..+++|..|++
T Consensus 131 ~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L 204 (605)
T 1m9s_A 131 PQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLEL 204 (605)
T ss_dssp TTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEC
T ss_pred CccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEc
Confidence 3455555555555543 445555555555555555555444 5555555555555555554 22 3555555555554
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 205 ~ 205 (605)
T 1m9s_A 205 F 205 (605)
T ss_dssp C
T ss_pred c
Confidence 4
No 382
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=97.95 E-value=5.7e-06 Score=89.72 Aligned_cols=81 Identities=20% Similarity=0.193 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCCCcccCccccc-ccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIF-SLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
.+.++.|+|++|.+++..|..+. ++++|++|+|++|++++. |. ...+++|+.|+|++|++++ +|..+..+++++.|
T Consensus 143 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L 219 (317)
T 3o53_A 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWI 219 (317)
T ss_dssp GSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEE
T ss_pred cCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCcccEE
Confidence 35899999999999988887774 789999999999999855 43 3468999999999999995 56668889999988
Q ss_pred ccccC
Q 002887 487 SLSVD 491 (870)
Q Consensus 487 ~~~~~ 491 (870)
+++.+
T Consensus 220 ~L~~N 224 (317)
T 3o53_A 220 SLRNN 224 (317)
T ss_dssp ECTTS
T ss_pred ECcCC
Confidence 88744
No 383
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=97.94 E-value=5e-06 Score=98.49 Aligned_cols=78 Identities=31% Similarity=0.428 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++|+.|+|++|.|++ + +.+.+|++|+.|+|++|+|++. ..|+.|++|+.|+|++|+|++.+| +..+++|..|+
T Consensus 108 l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 4688999999999986 3 5699999999999999999975 568899999999999999997766 88889999888
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 182 Ls~N 185 (605)
T 1m9s_A 182 LSKN 185 (605)
T ss_dssp CCSS
T ss_pred CcCC
Confidence 8744
No 384
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.94 E-value=7.6e-06 Score=93.65 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=58.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|+| +| ++++++|++|+|++|+|++ +| ++++++|+.|+|++|+|++ +| ++.+++++.|+
T Consensus 63 l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~ 133 (457)
T 3bz5_A 63 LTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLN 133 (457)
T ss_dssp CTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEE
Confidence 3578888888888886 44 8888888888888888886 44 7888888888888888886 55 77778888777
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 134 l~~N 137 (457)
T 3bz5_A 134 CARN 137 (457)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7643
No 385
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.93 E-value=7.1e-06 Score=88.69 Aligned_cols=76 Identities=20% Similarity=0.286 Sum_probs=44.9
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.+++.. + ++++++|+.|+|++|++++ +|. +..+++|+.|+|++|++++..| +..+++++.|+
T Consensus 128 l~~L~~L~l~~n~l~~~~-~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 201 (308)
T 1h6u_A 128 LSNLQVLYLDLNQITNIS-P-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVH 201 (308)
T ss_dssp CTTCCEEECCSSCCCCCG-G-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcCc-c-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEE
Confidence 345666666666666432 2 6666666666666666664 333 5666666666666666664322 55566666655
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 202 L~ 203 (308)
T 1h6u_A 202 LK 203 (308)
T ss_dssp CT
T ss_pred cc
Confidence 55
No 386
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=97.92 E-value=7.8e-06 Score=93.56 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=59.6
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|+|+|. | +++|++|++|+|++|+|++ +| ++.+++|+.|+|++|+|++ +| ++.+++++.|+
T Consensus 84 l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~ 154 (457)
T 3bz5_A 84 NTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELD 154 (457)
T ss_dssp CTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEE
Confidence 46788888888888873 3 8888888888888888886 55 7888888888888888887 43 77778888777
Q ss_pred cccC
Q 002887 488 LSVD 491 (870)
Q Consensus 488 ~~~~ 491 (870)
++.+
T Consensus 155 l~~n 158 (457)
T 3bz5_A 155 CHLN 158 (457)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 7643
No 387
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=97.91 E-value=1.3e-06 Score=100.01 Aligned_cols=63 Identities=13% Similarity=0.012 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCC-------------CeEEecCCcCCC
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSL-------------RVLNLSGNNLQG 471 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L-------------~~L~ls~N~l~g 471 (870)
..+++.|+|++|+| |.||++|++|++|++|+|++|+++|.+|..++++++| +.|+|++|+|+|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~ 85 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS 85 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc
Confidence 45889999999999 8999999999999999999999999999999887764 677777777664
No 388
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=97.90 E-value=9.3e-06 Score=92.85 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=56.9
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
+.++.|+|++|++++ +| +|+++++|++|+|++|++++ +|..+ .+|+.|+|++|++++ +| .++.+++++.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 477888888888886 77 58888888888888888885 77643 478888888888886 66 5777787777776
Q ss_pred cc
Q 002887 489 SV 490 (870)
Q Consensus 489 ~~ 490 (870)
+.
T Consensus 203 ~~ 204 (454)
T 1jl5_A 203 DN 204 (454)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 389
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=97.90 E-value=8.9e-06 Score=87.91 Aligned_cols=76 Identities=17% Similarity=0.336 Sum_probs=56.2
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|++++ +++ +.++++|+.|+|++|++++. |. +..+++|+.|+|++|++++..| +..+++++.|+
T Consensus 150 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 223 (308)
T 1h6u_A 150 LTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVT 223 (308)
T ss_dssp CTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEE
T ss_pred CCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcC-hh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEE
Confidence 3577888888888875 444 78888888888888888754 33 7778888888888888875543 67777777777
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 224 l~ 225 (308)
T 1h6u_A 224 LT 225 (308)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 390
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=97.87 E-value=8.1e-06 Score=95.79 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=47.9
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCC-------CeEEecCCcCCCCCCCcccccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSL-------RVLNLSGNNLQGSLPSGLSEKV 481 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L-------~~L~ls~N~l~g~ip~~l~~~~ 481 (870)
+.++.|+|++|.|++ ||. |. ++|+.|+|++|+|+ .||. +.. +| +.|+|++|+|+ .||..+..++
T Consensus 160 ~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~ 230 (571)
T 3cvr_A 160 TSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLD 230 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSC
T ss_pred CCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCC
Confidence 466777777777775 666 55 77777777777777 6666 543 55 77777777777 5777777777
Q ss_pred cCCccccc
Q 002887 482 KNGSLSLS 489 (870)
Q Consensus 482 ~~~~l~~~ 489 (870)
++..|+++
T Consensus 231 ~L~~L~L~ 238 (571)
T 3cvr_A 231 PTCTIILE 238 (571)
T ss_dssp TTEEEECC
T ss_pred CCCEEEee
Confidence 76666655
No 391
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.86 E-value=7.9e-07 Score=96.96 Aligned_cols=80 Identities=21% Similarity=0.284 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCC-CCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGP-VPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~-iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
..++.|+|++|.+.+.++. +.++++|++|+|++|++++. +|..+..+++|+.|+|++|++++.+|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4677777888777766554 56777788888888777765 777777777888888888877777777777777777777
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 149 L~ 150 (336)
T 2ast_B 149 LS 150 (336)
T ss_dssp CT
T ss_pred CC
Confidence 66
No 392
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.82 E-value=1.1e-05 Score=92.53 Aligned_cols=75 Identities=21% Similarity=0.259 Sum_probs=53.3
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|+++|..| ++.+++|+.|+|++|++++. ..++++++|+.|+|++|+++|.+| +..+++++.|++
T Consensus 309 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 382 (466)
T 1o6v_A 309 KNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGL 382 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEec
Confidence 467777777777776555 67777777777777777764 356777777777777777777666 666777776665
Q ss_pred c
Q 002887 489 S 489 (870)
Q Consensus 489 ~ 489 (870)
+
T Consensus 383 ~ 383 (466)
T 1o6v_A 383 N 383 (466)
T ss_dssp C
T ss_pred c
Confidence 4
No 393
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.82 E-value=1.6e-06 Score=94.45 Aligned_cols=81 Identities=28% Similarity=0.321 Sum_probs=49.9
Q ss_pred CcEEEEEcCCCCCccc-CcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC-cCCC-CCCCcccccccCCc
Q 002887 409 PRIISINLSSSGIAGD-IVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN-NLQG-SLPSGLSEKVKNGS 485 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N-~l~g-~ip~~l~~~~~~~~ 485 (870)
++++.|+|++|.+++. +|..+.++++|++|+|++|++++.+|..++++++|+.|+|++| .+++ .+|..+..+++|+.
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4566666666666654 6666666666666666666666666666666666666666666 4554 25555555666666
Q ss_pred cccc
Q 002887 486 LSLS 489 (870)
Q Consensus 486 l~~~ 489 (870)
|+++
T Consensus 173 L~l~ 176 (336)
T 2ast_B 173 LNLS 176 (336)
T ss_dssp EECC
T ss_pred EcCC
Confidence 5554
No 394
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.79 E-value=1.7e-05 Score=94.05 Aligned_cols=71 Identities=21% Similarity=0.287 Sum_probs=35.4
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
.++.|+|++|+|++ || ..+++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .||..+..+++|..|+++
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 45555555555553 44 33445555555555555 3444 3445555555555555 455555555555544443
No 395
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.79 E-value=1.5e-06 Score=96.88 Aligned_cols=81 Identities=17% Similarity=0.189 Sum_probs=63.7
Q ss_pred CcEEEEEcCCCCCc----ccCcccccccCcccccccccCcCCCC----CCccc--cCcCCCCeEEecCCcCCC----CCC
Q 002887 409 PRIISINLSSSGIA----GDIVPYIFSLTSIESLDLSKNSLTGP----VPEFL--AELQSLRVLNLSGNNLQG----SLP 474 (870)
Q Consensus 409 ~~l~~l~L~~n~l~----G~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~--~~l~~L~~L~ls~N~l~g----~ip 474 (870)
++++.|+|++|.|+ +.+|..+.++++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|++++ .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 47888888888886 67888888888888888888888876 66666 348888888888888887 477
Q ss_pred Ccc-cccccCCccccc
Q 002887 475 SGL-SEKVKNGSLSLS 489 (870)
Q Consensus 475 ~~l-~~~~~~~~l~~~ 489 (870)
..+ .+++++..|+++
T Consensus 296 ~~l~~~l~~L~~L~l~ 311 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELN 311 (386)
T ss_dssp HHHHHHCTTCCEEECT
T ss_pred HHHHhcCCCceEEEcc
Confidence 777 556788877776
No 396
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.75 E-value=3.3e-06 Score=94.19 Aligned_cols=81 Identities=25% Similarity=0.263 Sum_probs=62.3
Q ss_pred CcEEEEEcCCCCCcccCc----ccccccCccccccccc---CcCCCCCCccc-------cCcCCCCeEEecCCcCCC---
Q 002887 409 PRIISINLSSSGIAGDIV----PYIFSLTSIESLDLSK---NSLTGPVPEFL-------AELQSLRVLNLSGNNLQG--- 471 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip----~~~~~l~~L~~L~Ls~---N~l~g~iP~~~-------~~l~~L~~L~ls~N~l~g--- 471 (870)
+.++.|+|++|+|++..+ ..|.++++|+.|+|++ |+++|.+|..+ ..+++|+.|+|++|++++
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 467888888888887633 4466788888888887 46677777665 678888888888888887
Q ss_pred -CCCCcccccccCCccccc
Q 002887 472 -SLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 472 -~ip~~l~~~~~~~~l~~~ 489 (870)
.+|..+..+++++.|+++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~ 130 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLH 130 (386)
T ss_dssp HHHHHHHHHCTTCCEEECC
T ss_pred HHHHHHHHhCCCCCEEECc
Confidence 477778888888887776
No 397
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=97.73 E-value=1.6e-05 Score=87.06 Aligned_cols=78 Identities=21% Similarity=0.284 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++++.|+|++|.+++ + +.+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..|..+..+++++.|+
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 4578899999999886 3 568889999999999999986 44 478889999999999999988888888888888888
Q ss_pred cc
Q 002887 488 LS 489 (870)
Q Consensus 488 ~~ 489 (870)
++
T Consensus 318 L~ 319 (347)
T 4fmz_A 318 LS 319 (347)
T ss_dssp CC
T ss_pred cc
Confidence 77
No 398
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.73 E-value=5.5e-06 Score=91.67 Aligned_cols=80 Identities=28% Similarity=0.261 Sum_probs=46.8
Q ss_pred cEEEEEcCCCCCcccCc----ccccccC-cccccccccCcCCCCCCccccCc-----CCCCeEEecCCcCCCCCCCcccc
Q 002887 410 RIISINLSSSGIAGDIV----PYIFSLT-SIESLDLSKNSLTGPVPEFLAEL-----QSLRVLNLSGNNLQGSLPSGLSE 479 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip----~~~~~l~-~L~~L~Ls~N~l~g~iP~~~~~l-----~~L~~L~ls~N~l~g~ip~~l~~ 479 (870)
.++.|+|++|+|++.-+ ..+.+++ +|++|+|++|++++..|..++.+ ++|+.|+|++|++++..+..++.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 46666666666665444 4455565 66666666666666555555554 66666666666666555554433
Q ss_pred c-----ccCCccccc
Q 002887 480 K-----VKNGSLSLS 489 (870)
Q Consensus 480 ~-----~~~~~l~~~ 489 (870)
. ++++.|+++
T Consensus 103 ~l~~~~~~L~~L~Ls 117 (362)
T 3goz_A 103 TLAAIPFTITVLDLG 117 (362)
T ss_dssp HHHTSCTTCCEEECC
T ss_pred HHHhCCCCccEEECc
Confidence 3 455555554
No 399
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.73 E-value=0.00012 Score=79.72 Aligned_cols=138 Identities=16% Similarity=0.196 Sum_probs=81.3
Q ss_pred cccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccc--cceeEEEE------EecCCeEEEEEEEcc
Q 002887 568 VLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHK--NLTILVGY------CDEGANMGLIYEFMA 639 (870)
Q Consensus 568 ~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~--nIv~l~g~------~~~~~~~~LV~Ey~~ 639 (870)
.|+.|..+.||+....+..+++|+..... ..+..|+.++..+... .+.+++.. ....+..+++|+|++
T Consensus 39 ~l~gG~~n~~~~v~~~~~~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSGAVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTEEEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCCCEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 46667789999998887779999987531 3344566666665322 22333321 123556789999999
Q ss_pred CCchh--------------hhhhhcc-----c-------ccccHHHH-------------------------------HH
Q 002887 640 NGNLQ--------------AHLLEDK-----A-------DTLCWERR-------------------------------LQ 662 (870)
Q Consensus 640 ~gsL~--------------~~l~~~~-----~-------~~l~~~~~-------------------------------~~ 662 (870)
|..+. ..++... . ..-.|... ..
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 86542 1111110 0 00123211 01
Q ss_pred HHHHHHHHHHHHHh----------CCCCCceeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887 663 IASESAQGLEYLHN----------GCKPPIVHRDVKSANILLNEKFQAKLADFGLSR 709 (870)
Q Consensus 663 i~~~ia~aL~yLH~----------~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~ 709 (870)
+...+.+++++|+. .....++|+|+++.|||++.++.+.|+||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11224446667763 124589999999999999888899999999775
No 400
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=97.70 E-value=1.9e-05 Score=90.38 Aligned_cols=77 Identities=25% Similarity=0.359 Sum_probs=57.5
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL 488 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~ 488 (870)
++++.|+|++|.+++. |+ +++|++|++|+|++|++++..| ++++++|+.|+|++|++++. |. +..+++|+.|++
T Consensus 68 ~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l 141 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLEL 141 (466)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEE
T ss_pred cCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEEC
Confidence 4778888888888854 33 8888888888888888886544 78888888888888888754 33 777777777777
Q ss_pred ccC
Q 002887 489 SVD 491 (870)
Q Consensus 489 ~~~ 491 (870)
+.+
T Consensus 142 ~~n 144 (466)
T 1o6v_A 142 SSN 144 (466)
T ss_dssp EEE
T ss_pred CCC
Confidence 643
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=97.66 E-value=6.9e-06 Score=86.63 Aligned_cols=68 Identities=29% Similarity=0.381 Sum_probs=53.1
Q ss_pred ccCcccccccCcccccccccCcCCC--CCCccccCcCCCCeEEecCCcCCCCCCCcccccc--cCCccccccCCCC
Q 002887 423 GDIVPYIFSLTSIESLDLSKNSLTG--PVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKV--KNGSLSLSVDGNR 494 (870)
Q Consensus 423 G~ip~~~~~l~~L~~L~Ls~N~l~g--~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~--~~~~l~~~~~~n~ 494 (870)
+.++....+|++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|..|.++ +|+
T Consensus 160 ~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~--~Np 231 (267)
T 3rw6_A 160 ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLD--GNS 231 (267)
T ss_dssp HHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECT--TST
T ss_pred HHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEcc--CCc
Confidence 3333334678999999999999999 7788889999999999999999975 4455555 56655554 776
No 402
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.65 E-value=0.00015 Score=81.19 Aligned_cols=73 Identities=18% Similarity=0.183 Sum_probs=49.4
Q ss_pred ccccccCcEEEEEEEE--CCeeEEEEEeeccch-------hhhHHHHHHHHHHHHhcc--ccce-eEEEEEecCCeEEEE
Q 002887 567 RVLGKGGFGTVYHGYL--DDKQVAVKMLSSSSV-------QGYKQFQAEVELLIRAHH--KNLT-ILVGYCDEGANMGLI 634 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~--~~~~vAVK~l~~~~~-------~~~~~f~~Ei~~l~~l~H--~nIv-~l~g~~~~~~~~~LV 634 (870)
+.||.|..+.||++.. .++.++||....... .....+..|.+++..+.+ +..+ +++.+. ....++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEEE
Confidence 5799999999999965 367899998653211 123456789999988843 3444 555443 3456899
Q ss_pred EEEccCC
Q 002887 635 YEFMANG 641 (870)
Q Consensus 635 ~Ey~~~g 641 (870)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999864
No 403
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.58 E-value=0.00033 Score=75.71 Aligned_cols=136 Identities=18% Similarity=0.206 Sum_probs=92.7
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhcc---ccceeEEEEEecCCeEEEEEEEccCCch
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH---KNLTILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H---~nIv~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
+.|+.|....+|+....+..+++|+.... ....+..|...|+.+.. ..+.++++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 46899999999999887888999987643 24568899999998842 5677888888888889999999998765
Q ss_pred hh-----------hhhhccc-c-------------------cccHHHHH---HHH----------------HHHHHH-HH
Q 002887 644 QA-----------HLLEDKA-D-------------------TLCWERRL---QIA----------------SESAQG-LE 672 (870)
Q Consensus 644 ~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~----------------~~ia~a-L~ 672 (870)
.. .|+.... . .-+|.... ++. ..+... ..
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 21 1222111 0 12454322 111 111111 22
Q ss_pred HHHh-CCCCCceeCCCCCCCEEEcCCCcEEEEecc
Q 002887 673 YLHN-GCKPPIVHRDVKSANILLNEKFQAKLADFG 706 (870)
Q Consensus 673 yLH~-~~~~~IvHrDLKp~NILld~~~~vkL~DFG 706 (870)
.|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3421 2356899999999999999887 8899974
No 404
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.57 E-value=1.9e-05 Score=93.72 Aligned_cols=71 Identities=25% Similarity=0.320 Sum_probs=64.3
Q ss_pred CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccC
Q 002887 408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKN 483 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~ 483 (870)
.+.++.|+|++|+|+ .||. .+++|+.|+|++|+|+ .||..|.++++|+.|+|++|+|+|.+|..+..+...
T Consensus 240 l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~~~ 310 (622)
T 3g06_A 240 PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSA 310 (622)
T ss_dssp CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHHHS
T ss_pred CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcccc
Confidence 358999999999999 6887 7899999999999999 899999999999999999999999999988776643
No 405
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.53 E-value=1.8e-05 Score=87.52 Aligned_cols=78 Identities=28% Similarity=0.239 Sum_probs=69.6
Q ss_pred EEEcCCCCCcccCcccccccCcccccccccCcCCCCCC----ccccCcC-CCCeEEecCCcCCCCCCCccccc-----cc
Q 002887 413 SINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVP----EFLAELQ-SLRVLNLSGNNLQGSLPSGLSEK-----VK 482 (870)
Q Consensus 413 ~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP----~~~~~l~-~L~~L~ls~N~l~g~ip~~l~~~-----~~ 482 (870)
.+.|+.|+++|.+|..+...++|++|+|++|++++.-+ ..|..++ +|+.|+|++|++++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999999999999999999999997777 7788888 99999999999999888888776 88
Q ss_pred CCcccccc
Q 002887 483 NGSLSLSV 490 (870)
Q Consensus 483 ~~~l~~~~ 490 (870)
++.|+++.
T Consensus 82 L~~L~Ls~ 89 (362)
T 3goz_A 82 VTSLNLSG 89 (362)
T ss_dssp CCEEECCS
T ss_pred ccEEECcC
Confidence 88888873
No 406
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.41 E-value=9.1e-05 Score=81.39 Aligned_cols=76 Identities=26% Similarity=0.364 Sum_probs=61.7
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCc-cccCcCCCCeEEecCCcCCCCCCC-cccccccCCcc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPE-FLAELQSLRVLNLSGNNLQGSLPS-GLSEKVKNGSL 486 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~L~ls~N~l~g~ip~-~l~~~~~~~~l 486 (870)
..++.|+|++|+|+ .||+.+...++|+.|+|++|+.-+.||. .|..+++|+.|||++|+|+ .+|. .+.++.+|..+
T Consensus 154 ~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~~~L~~L~~l 231 (350)
T 4ay9_X 154 FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRAR 231 (350)
T ss_dssp SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSCTTCCEEECT
T ss_pred hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhhccchHhhhc
Confidence 46889999999999 7888888999999999997665558885 5799999999999999999 5555 45555555443
No 407
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.35 E-value=1.2e-05 Score=91.47 Aligned_cols=81 Identities=22% Similarity=0.191 Sum_probs=65.0
Q ss_pred CcEEEEEcCCCCCccc----CcccccccCcccccccccCcCCCCCCccccC-----cCCCCeEEecCCcCCC----CCCC
Q 002887 409 PRIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLTGPVPEFLAE-----LQSLRVLNLSGNNLQG----SLPS 475 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~-----l~~L~~L~ls~N~l~g----~ip~ 475 (870)
++++.|+|++|++++. ++..+.++++|+.|+|++|.+++..+..++. +++|+.|+|++|++++ .+|.
T Consensus 313 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~ 392 (461)
T 1z7x_W 313 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 392 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred ccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH
Confidence 4788888888888875 6777788889999999999888765555543 6788999999998886 7888
Q ss_pred cccccccCCccccc
Q 002887 476 GLSEKVKNGSLSLS 489 (870)
Q Consensus 476 ~l~~~~~~~~l~~~ 489 (870)
.+..+++++.|+++
T Consensus 393 ~l~~~~~L~~L~l~ 406 (461)
T 1z7x_W 393 TLLANHSLRELDLS 406 (461)
T ss_dssp HHHHCCCCCEEECC
T ss_pred HHHhCCCccEEECC
Confidence 88888888888776
No 408
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.29 E-value=0.00074 Score=76.08 Aligned_cols=77 Identities=10% Similarity=0.098 Sum_probs=47.0
Q ss_pred CCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccccc--CCCCccCccccccC---CCCccchHHHHHHHH
Q 002887 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTTVV--GTPGYLDPEYYISN---RLTEKSDVYSFGVVL 753 (870)
Q Consensus 679 ~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~~~--gt~~y~APE~~~~~---~~~~ksDVwS~GvvL 753 (870)
.+.++|+|+++.|||+++++ ++++||+.+..-... ....... -...|++|+..... +.....++......+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 45899999999999999876 999999988753110 0000000 01245666554311 112235566778888
Q ss_pred HHHHhC
Q 002887 754 LELITG 759 (870)
Q Consensus 754 ~elltG 759 (870)
|+..++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877765
No 409
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.28 E-value=0.00075 Score=71.78 Aligned_cols=73 Identities=18% Similarity=0.103 Sum_probs=53.9
Q ss_pred ccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccc---cceeEEEEEecCCeEEEEEEEccCCc
Q 002887 567 RVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHK---NLTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~---nIv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
+.+|.|..+.||+.... |+.+.+|+-..........|..|+..|+.+... -+.+++++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 46899999999999986 789999987655444445688999999998432 244555543 2478999998764
Q ss_pred h
Q 002887 643 L 643 (870)
Q Consensus 643 L 643 (870)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 410
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.06 E-value=3.5e-05 Score=87.69 Aligned_cols=81 Identities=20% Similarity=0.238 Sum_probs=51.8
Q ss_pred CcEEEEEcCCCCCccc----CcccccccCcccccccccCcCCCCCCccccCc-----CCCCeEEecCCcCCCC----CCC
Q 002887 409 PRIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLTGPVPEFLAEL-----QSLRVLNLSGNNLQGS----LPS 475 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l-----~~L~~L~ls~N~l~g~----ip~ 475 (870)
++++.|+|++|++++. ++..+.++++|+.|+|++|.+++.-+..+... ++|+.|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 4667777777777654 66666667777777777777665444444332 5777777777777654 455
Q ss_pred cccccccCCccccc
Q 002887 476 GLSEKVKNGSLSLS 489 (870)
Q Consensus 476 ~l~~~~~~~~l~~~ 489 (870)
.+..+++++.|+++
T Consensus 336 ~l~~~~~L~~L~Ls 349 (461)
T 1z7x_W 336 VLAQNRFLLELQIS 349 (461)
T ss_dssp HHHHCSSCCEEECC
T ss_pred HHhhCCCccEEEcc
Confidence 55566666666665
No 411
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.04 E-value=4.7e-05 Score=84.63 Aligned_cols=81 Identities=21% Similarity=0.213 Sum_probs=53.6
Q ss_pred CcEEEEEcCCCCCcc----cCcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCCC----CCCc
Q 002887 409 PRIISINLSSSGIAG----DIVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQGS----LPSG 476 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g~----ip~~ 476 (870)
+.++.|+|++|+|+. .++..+..+++|++|+|++|+|+.. ++..+..+++|+.|+|++|+|+.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 367777888887764 3455556777788888888877642 355566667788888888877642 3334
Q ss_pred ccccccCCccccc
Q 002887 477 LSEKVKNGSLSLS 489 (870)
Q Consensus 477 l~~~~~~~~l~~~ 489 (870)
+..++.+..|+++
T Consensus 235 L~~~~~L~~L~Ls 247 (372)
T 3un9_A 235 AREHPSLELLHLY 247 (372)
T ss_dssp HHHCSSCCEEECT
T ss_pred HHhCCCCCEEecc
Confidence 4455667777666
No 412
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.97 E-value=0.002 Score=69.34 Aligned_cols=141 Identities=11% Similarity=0.142 Sum_probs=82.4
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc--eeEEEEE------ecCCeEEEEEEEc
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL--TILVGYC------DEGANMGLIYEFM 638 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI--v~l~g~~------~~~~~~~LV~Ey~ 638 (870)
+.|+.|....+|+....+..+++|+.... .....+..|+.++..+....+ .+++... ...+..+++++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred eccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 35777888999999887668889988653 123456678888887753332 2333211 1234578999999
Q ss_pred cCCchhh--------------hhhhcc-----c-----ccccHHHHHH------------HHHHHHHHHHHHHhC----C
Q 002887 639 ANGNLQA--------------HLLEDK-----A-----DTLCWERRLQ------------IASESAQGLEYLHNG----C 678 (870)
Q Consensus 639 ~~gsL~~--------------~l~~~~-----~-----~~l~~~~~~~------------i~~~ia~aL~yLH~~----~ 678 (870)
+|..+.. .++... . ....|..... +...+.+.++.+++. .
T Consensus 106 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~~ 185 (322)
T 2ppq_A 106 EGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDL 185 (322)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcccC
Confidence 9865421 011100 0 0122433111 011244556666532 2
Q ss_pred CCCceeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887 679 KPPIVHRDVKSANILLNEKFQAKLADFGLSR 709 (870)
Q Consensus 679 ~~~IvHrDLKp~NILld~~~~vkL~DFGla~ 709 (870)
...++|+|+++.|||++++..+.|+||+.+.
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 3479999999999999987666899998775
No 413
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.91 E-value=0.0029 Score=67.61 Aligned_cols=127 Identities=12% Similarity=0.130 Sum_probs=76.3
Q ss_pred ccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEEEEc-cCCchh
Q 002887 567 RVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIYEFM-ANGNLQ 644 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~Ey~-~~gsL~ 644 (870)
+.|+.|....+|+. +.+++|+-...... .....+|+.+++.+....+ .++++++. +.-++++||+ ++.++.
T Consensus 24 ~~l~gG~tN~~~~~----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 24 LERLGGLTNLVFRA----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp EEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEECC
T ss_pred eEcCCcccccccee----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCccCC
Confidence 56888999999998 66888887653221 2234678888888754444 35555543 3346899999 554443
Q ss_pred hhhhhcccccccHHHHHHHHHHHHHHHHHHHh------------------------------------------------
Q 002887 645 AHLLEDKADTLCWERRLQIASESAQGLEYLHN------------------------------------------------ 676 (870)
Q Consensus 645 ~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~------------------------------------------------ 676 (870)
...... +..++.++++.|+-||+
T Consensus 97 ~~~~~~---------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~ 167 (301)
T 3dxq_A 97 PEKFKT---------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA 167 (301)
T ss_dssp HHHHHH---------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred HhhHhh---------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence 210000 00112222222222222
Q ss_pred --CCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 677 --GCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 677 --~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
.....++|+|+.+.||+ .+++.+.++||..+..
T Consensus 168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12235899999999999 5667889999988764
No 414
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.87 E-value=0.0036 Score=67.91 Aligned_cols=139 Identities=14% Similarity=0.037 Sum_probs=73.7
Q ss_pred ccccccCcEE-EEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc--ceeEEEEEecCCeEEEEEEEccCCc
Q 002887 567 RVLGKGGFGT-VYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN--LTILVGYCDEGANMGLIYEFMANGN 642 (870)
Q Consensus 567 ~~LG~G~fG~-Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~~~~~LV~Ey~~~gs 642 (870)
+.|+.|.... +|+.... ++.+++|...... ...+..|+.++..+.... +.+++.+..+.. +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3466565554 6677664 6777777654321 134567788887774333 456666644333 68999997766
Q ss_pred hhhhhhhccc------------------------ccccHHHHH--------------------HHHHHHHHHHHHHH---
Q 002887 643 LQAHLLEDKA------------------------DTLCWERRL--------------------QIASESAQGLEYLH--- 675 (870)
Q Consensus 643 L~~~l~~~~~------------------------~~l~~~~~~--------------------~i~~~ia~aL~yLH--- 675 (870)
+.+++..... ..++..... .....+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 5443321100 001110000 00011122223331
Q ss_pred hCCCCCceeCCCCCCCEEEcCC----CcEEEEeccCCcc
Q 002887 676 NGCKPPIVHRDVKSANILLNEK----FQAKLADFGLSRI 710 (870)
Q Consensus 676 ~~~~~~IvHrDLKp~NILld~~----~~vkL~DFGla~~ 710 (870)
......++|||+.+.||+++.+ ..+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123479999999999999875 6899999998864
No 415
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.78 E-value=0.0034 Score=70.95 Aligned_cols=71 Identities=15% Similarity=0.225 Sum_probs=49.9
Q ss_pred ccccccCcEEEEEEEEC---------CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEEE
Q 002887 567 RVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIYE 636 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~E 636 (870)
+.|+.|....+|+.... ++.+++|+..... ....+.+|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 46888989999999875 3678888874421 11455679999998854444 567776653 38999
Q ss_pred EccCCch
Q 002887 637 FMANGNL 643 (870)
Q Consensus 637 y~~~gsL 643 (870)
|+++.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986554
No 416
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.68 E-value=0.00018 Score=79.91 Aligned_cols=80 Identities=25% Similarity=0.243 Sum_probs=38.0
Q ss_pred cEEEEEcCCCCCcccCccccc-ccCcccccccccCcCCCCCCccc-----cCcCCCCeEEecCCcCCC----CCCCcccc
Q 002887 410 RIISINLSSSGIAGDIVPYIF-SLTSIESLDLSKNSLTGPVPEFL-----AELQSLRVLNLSGNNLQG----SLPSGLSE 479 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~-~l~~L~~L~Ls~N~l~g~iP~~~-----~~l~~L~~L~ls~N~l~g----~ip~~l~~ 479 (870)
.++.|+|++|+|+..-...+. .|++|+.|+|++|+|+..-...+ ...++|+.|+|++|+|+. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 566666666665543222222 34555666666665543322222 123455556666555542 12333344
Q ss_pred cccCCccccc
Q 002887 480 KVKNGSLSLS 489 (870)
Q Consensus 480 ~~~~~~l~~~ 489 (870)
++++..|+++
T Consensus 182 ~~~L~~L~Ls 191 (372)
T 3un9_A 182 NTSVTHLSLL 191 (372)
T ss_dssp CSSCCEEECT
T ss_pred CCCcCEEeCC
Confidence 4455555544
No 417
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.64 E-value=0.01 Score=67.53 Aligned_cols=72 Identities=14% Similarity=0.132 Sum_probs=49.0
Q ss_pred ccccccCcEEEEEEEECC--eeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEEEEccCCch
Q 002887 567 RVLGKGGFGTVYHGYLDD--KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIYEFMANGNL 643 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~--~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~Ey~~~gsL 643 (870)
+.|+.|-...+|+....+ ..+++|+...... ..-...+|..++..+...++ .++++.+.. .+||||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 468889999999999876 7888888744321 11123689999999965555 467777642 259999997655
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.61 E-value=0.00021 Score=71.02 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=38.3
Q ss_pred cEEEEEcCCC-CCcc----cCcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCCC----CCCc
Q 002887 410 RIISINLSSS-GIAG----DIVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQGS----LPSG 476 (870)
Q Consensus 410 ~l~~l~L~~n-~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g~----ip~~ 476 (870)
.++.|+|++| +|.. .+...+...++|++|+|++|+|+.. |...+...++|+.|+|++|+++.. +...
T Consensus 37 ~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~ 116 (185)
T 1io0_A 37 DLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEA 116 (185)
T ss_dssp TCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHG
T ss_pred CCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHH
Confidence 4555555555 5543 1333344455556666666555421 223333445555666666655432 2333
Q ss_pred ccccccCCcccc
Q 002887 477 LSEKVKNGSLSL 488 (870)
Q Consensus 477 l~~~~~~~~l~~ 488 (870)
+.....+..|++
T Consensus 117 L~~n~~L~~L~L 128 (185)
T 1io0_A 117 LQSNTSLIELRI 128 (185)
T ss_dssp GGGCSSCCEEEC
T ss_pred HHhCCCceEEEe
Confidence 444444555555
No 419
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.59 E-value=0.0071 Score=67.01 Aligned_cols=139 Identities=17% Similarity=0.220 Sum_probs=82.5
Q ss_pred ccccccCcEEEEEEEEC---------CeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc-ceeEEEEEecCCeEEEEEE
Q 002887 567 RVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN-LTILVGYCDEGANMGLIYE 636 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n-Iv~l~g~~~~~~~~~LV~E 636 (870)
+.|..|-...+|+.... ++.+.+|+-... ......+.+|..+++.+.... ..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35777888889998863 367888885332 223455678999998885333 3566776654 29999
Q ss_pred EccCCchhhh-h----------------hhcc---cccc--cHHHHHHHHHHHHH-------------------HHHHHH
Q 002887 637 FMANGNLQAH-L----------------LEDK---ADTL--CWERRLQIASESAQ-------------------GLEYLH 675 (870)
Q Consensus 637 y~~~gsL~~~-l----------------~~~~---~~~l--~~~~~~~i~~~ia~-------------------aL~yLH 675 (870)
|++|..|... + +... .+.. -|.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998665421 1 1000 0112 24454444443321 233332
Q ss_pred ----hC-CCCCceeCCCCCCCEEEcCC----CcEEEEeccCCcc
Q 002887 676 ----NG-CKPPIVHRDVKSANILLNEK----FQAKLADFGLSRI 710 (870)
Q Consensus 676 ----~~-~~~~IvHrDLKp~NILld~~----~~vkL~DFGla~~ 710 (870)
.. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 23468999999999999887 7899999988753
No 420
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.44 E-value=0.011 Score=65.19 Aligned_cols=72 Identities=14% Similarity=0.155 Sum_probs=45.3
Q ss_pred ccccccCcEEEEEEEECC----------eeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEE
Q 002887 567 RVLGKGGFGTVYHGYLDD----------KQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIY 635 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~----------~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~ 635 (870)
+.|+.|....+|+....+ +.+++|+...... .......|.++++.+...++ .++++... -.+||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 457788888999998764 6788887654322 12234688888888854444 36665542 26899
Q ss_pred EEccCCch
Q 002887 636 EFMANGNL 643 (870)
Q Consensus 636 Ey~~~gsL 643 (870)
||+++..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99997654
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.43 E-value=0.00028 Score=70.12 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=62.9
Q ss_pred CcEEEEEcCCCCCcc----cCcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEe--cCCcCCCC----CC
Q 002887 409 PRIISINLSSSGIAG----DIVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNL--SGNNLQGS----LP 474 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~l--s~N~l~g~----ip 474 (870)
..++.|+|++|+|.. .|...+...++|++|+|++|+|+.. +...+...++|+.|+| ++|.++.. +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 478999999999975 3555667778999999999999864 5677888899999999 88998754 23
Q ss_pred CcccccccCCccccc
Q 002887 475 SGLSEKVKNGSLSLS 489 (870)
Q Consensus 475 ~~l~~~~~~~~l~~~ 489 (870)
..+...+.+..|+++
T Consensus 145 ~~L~~n~~L~~L~L~ 159 (185)
T 1io0_A 145 NMLEKNTTLLKFGYH 159 (185)
T ss_dssp HHHHHCSSCCEEECC
T ss_pred HHHHhCCCcCEEecc
Confidence 344455677777775
No 422
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.36 E-value=0.00025 Score=83.27 Aligned_cols=79 Identities=11% Similarity=0.111 Sum_probs=43.0
Q ss_pred cEEEEEcCCCCCccc----CcccccccCcccccccccCcCC----CCCCccccCcCCCCeEEecCCcCCCCCCCcccccc
Q 002887 410 RIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLT----GPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKV 481 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~----g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~ 481 (870)
.++.|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+++ +|..+..++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~ 243 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA 243 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh
Confidence 455566666655544 4444455566666666666655 2333334455666666666666554 455555555
Q ss_pred cCCccccc
Q 002887 482 KNGSLSLS 489 (870)
Q Consensus 482 ~~~~l~~~ 489 (870)
++..|.++
T Consensus 244 ~L~~L~l~ 251 (592)
T 3ogk_B 244 NLEEFCGG 251 (592)
T ss_dssp TCCEEEEC
T ss_pred HHHhhccc
Confidence 55555544
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.31 E-value=0.0043 Score=57.75 Aligned_cols=56 Identities=23% Similarity=0.338 Sum_probs=38.6
Q ss_pred EEEcCCCCCc-ccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCC
Q 002887 413 SINLSSSGIA-GDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQ 470 (870)
Q Consensus 413 ~l~L~~n~l~-G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~ 470 (870)
.++.++++|+ ..+|..|. ++|+.|+|++|+|+..-+..|..|++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566677775 45665432 46788888888888443455677888888888888764
No 424
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.16 E-value=0.011 Score=63.68 Aligned_cols=139 Identities=12% Similarity=0.137 Sum_probs=80.0
Q ss_pred cccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc--ceeEEEE-----EecCCeEEEEEEEcc
Q 002887 568 VLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN--LTILVGY-----CDEGANMGLIYEFMA 639 (870)
Q Consensus 568 ~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~-----~~~~~~~~LV~Ey~~ 639 (870)
.++ |....||+.... |+.+++|+..... .....+..|..++..+.... +.+++.. ....+..+++|+|++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 777899988765 5679999986432 12356677888888875333 3334433 112345678999999
Q ss_pred CCchhh----h----------hhhcc-------cccccHHHH----HHH---------------HHHHHHHHHHHHhC--
Q 002887 640 NGNLQA----H----------LLEDK-------ADTLCWERR----LQI---------------ASESAQGLEYLHNG-- 677 (870)
Q Consensus 640 ~gsL~~----~----------l~~~~-------~~~l~~~~~----~~i---------------~~~ia~aL~yLH~~-- 677 (870)
|..+.. . ++... ....++... ..+ ...+.+.++.+...
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 865421 0 11100 011222211 001 11111223333321
Q ss_pred --CCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887 678 --CKPPIVHRDVKSANILLNEKFQAKLADFGLSRI 710 (870)
Q Consensus 678 --~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~ 710 (870)
....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999987753
No 425
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.89 E-value=0.002 Score=75.54 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=44.8
Q ss_pred CcEEEEEcCCCCCc----ccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC
Q 002887 409 PRIISINLSSSGIA----GDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 409 ~~l~~l~L~~n~l~----G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N 467 (870)
+.++.|+|++|+++ +.++..+.++++|+.|+|++|.++| +|..+.++++|+.|+++.+
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~ 253 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSL 253 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBC
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccc
Confidence 47888888888887 5666667788888888888888875 6777777777777777753
No 426
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.89 E-value=0.00062 Score=79.88 Aligned_cols=80 Identities=18% Similarity=0.137 Sum_probs=59.3
Q ss_pred CcEEEEEcCCCCCcccCcccccc-cCcccccccccCcCCCCCCccc-cCcCCCCeEEecCCcCCCCCCC-cccccccCCc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFS-LTSIESLDLSKNSLTGPVPEFL-AELQSLRVLNLSGNNLQGSLPS-GLSEKVKNGS 485 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~-l~~L~~L~Ls~N~l~g~iP~~~-~~l~~L~~L~ls~N~l~g~ip~-~l~~~~~~~~ 485 (870)
++++.|+|++ ++++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+. .+..+++|+.
T Consensus 432 ~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~ 510 (594)
T 2p1m_B 432 KDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRS 510 (594)
T ss_dssp TTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSE
T ss_pred CCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCE
Confidence 4688888876 777777777776 8888888888888877655555 5688888888888888654443 3344777887
Q ss_pred cccc
Q 002887 486 LSLS 489 (870)
Q Consensus 486 l~~~ 489 (870)
|+++
T Consensus 511 L~l~ 514 (594)
T 2p1m_B 511 LWMS 514 (594)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 7776
No 427
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.83 E-value=0.00094 Score=78.35 Aligned_cols=82 Identities=21% Similarity=0.216 Sum_probs=51.2
Q ss_pred CcEEEEEcCCCCCcccCccccc-ccCcccccccccC-cCCCC-CCccccCcCCCCeEEecCCcCCCCCCCccc----ccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIF-SLTSIESLDLSKN-SLTGP-VPEFLAELQSLRVLNLSGNNLQGSLPSGLS----EKV 481 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~-~l~~L~~L~Ls~N-~l~g~-iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~----~~~ 481 (870)
++++.|+|++|.+++..+..+. ++++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3567777777777776666665 5777777777777 44432 444445677777777777776665544443 344
Q ss_pred cCCcccccc
Q 002887 482 KNGSLSLSV 490 (870)
Q Consensus 482 ~~~~l~~~~ 490 (870)
+|+.|+++.
T Consensus 185 ~L~~L~l~~ 193 (594)
T 2p1m_B 185 SLVSLNISC 193 (594)
T ss_dssp CCCEEECTT
T ss_pred cCcEEEecc
Confidence 566666653
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=95.64 E-value=0.011 Score=54.82 Aligned_cols=59 Identities=25% Similarity=0.302 Sum_probs=46.5
Q ss_pred cccccccCcCC-CCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccCCCCCCCC
Q 002887 436 ESLDLSKNSLT-GPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVDGNRNLCP 498 (870)
Q Consensus 436 ~~L~Ls~N~l~-g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~~n~~lc~ 498 (870)
..++.++++|+ ..||..+. ++|+.|+|++|+|+..-+..+..+++|+.|+++ +|+..|.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~--~NP~~Cd 70 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLG--ANPWRCD 70 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECC--SSCCBCS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEec--CCCeecc
Confidence 47899999997 67887543 479999999999995444556778888877665 8998886
No 429
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.50 E-value=0.066 Score=59.53 Aligned_cols=140 Identities=19% Similarity=0.213 Sum_probs=81.6
Q ss_pred ccccccCcEEEEEEEECC---------eeEEEEEeeccchh-----------hh-------HHHHHHHHHHHHhcccc-c
Q 002887 567 RVLGKGGFGTVYHGYLDD---------KQVAVKMLSSSSVQ-----------GY-------KQFQAEVELLIRAHHKN-L 618 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~~---------~~vAVK~l~~~~~~-----------~~-------~~f~~Ei~~l~~l~H~n-I 618 (870)
+.|..|-...+|+....+ +.+.+++.-..... .. .....|..+++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888999988752 56778776443211 01 12235888888885444 4
Q ss_pred eeEEEEEecCCeEEEEEEEccCCchhhh-h----------------hhcc---ccccc--HHHHHHHHHHHH--------
Q 002887 619 TILVGYCDEGANMGLIYEFMANGNLQAH-L----------------LEDK---ADTLC--WERRLQIASESA-------- 668 (870)
Q Consensus 619 v~l~g~~~~~~~~~LV~Ey~~~gsL~~~-l----------------~~~~---~~~l~--~~~~~~i~~~ia-------- 668 (870)
.++++++.++ +|+||+++-+|... + +... .+... |....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776542 89999997555321 1 0000 01122 333333333221
Q ss_pred --------------HHH----HHHHhC-CCCCceeCCCCCCCEEEcCC------CcEEEEeccCCcc
Q 002887 669 --------------QGL----EYLHNG-CKPPIVHRDVKSANILLNEK------FQAKLADFGLSRI 710 (870)
Q Consensus 669 --------------~aL----~yLH~~-~~~~IvHrDLKp~NILld~~------~~vkL~DFGla~~ 710 (870)
+-+ .+|... ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 23468899999999999887 7899999987753
No 430
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.33 E-value=0.04 Score=59.94 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=44.0
Q ss_pred cccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc---ceeEEEE------EecCCeEEEEEEEccC
Q 002887 570 GKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN---LTILVGY------CDEGANMGLIYEFMAN 640 (870)
Q Consensus 570 G~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n---Iv~l~g~------~~~~~~~~LV~Ey~~~ 640 (870)
|.|....||+....+..+++|+...... ..|+.++..+.... +.+.+.. .......+++|+|++|
T Consensus 32 G~g~~N~vy~v~~~~g~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSESKSYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSSCEEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCCCCEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 4444689999987655899998765431 45666776663222 3444432 1234667899999998
Q ss_pred Cch
Q 002887 641 GNL 643 (870)
Q Consensus 641 gsL 643 (870)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.32 E-value=0.0023 Score=70.51 Aligned_cols=64 Identities=19% Similarity=0.353 Sum_probs=48.7
Q ss_pred CCcEEEEEcCCCCCcccCccccc---ccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCC
Q 002887 408 SPRIISINLSSSGIAGDIVPYIF---SLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQG 471 (870)
Q Consensus 408 ~~~l~~l~L~~n~l~G~ip~~~~---~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g 471 (870)
.++++.|+|.+|.+.+..+..+. .+++|+.|+|+.|.|++. ++..+..+++|+.|+|++|.++.
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 46888888888888866555554 478888888988888763 55556677888888888887763
No 432
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=94.74 E-value=0.018 Score=62.29 Aligned_cols=76 Identities=12% Similarity=0.099 Sum_probs=48.3
Q ss_pred cEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCccccCcCCCC-eEEecCCcCCCCCCCcccccccCCccc
Q 002887 410 RIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPEFLAELQSLR-VLNLSGNNLQGSLPSGLSEKVKNGSLS 487 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~-~L~ls~N~l~g~ip~~l~~~~~~~~l~ 487 (870)
.++.|+|++|+++ .||. .|.+|++|+.|+|++| ++..=+..|.++++|+ .|+|.+ +++.--+..+..+.+|+.++
T Consensus 227 ~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 227 NLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 5677777777776 4554 3777777777777776 5532234567777777 777776 55533335666666666665
Q ss_pred c
Q 002887 488 L 488 (870)
Q Consensus 488 ~ 488 (870)
+
T Consensus 304 l 304 (329)
T 3sb4_A 304 A 304 (329)
T ss_dssp E
T ss_pred e
Confidence 4
No 433
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.50 E-value=0.15 Score=51.33 Aligned_cols=166 Identities=13% Similarity=0.069 Sum_probs=89.0
Q ss_pred CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887 641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS 720 (870)
Q Consensus 641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~ 720 (870)
-+|.+.|. ..+.++++.+++.++.|.+.+|.-+-.+.. + ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 36777764 356799999999999999999877622111 1 1344456899999999988764 1110
Q ss_pred ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCC-CCccchHHHHHHHHhhcCCcchhcccccCC--CC
Q 002887 721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQK-TPQRTLIGQWVSSMLARGDIKNIVDHRLQG--DF 797 (870)
Q Consensus 721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~-~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~--~~ 797 (870)
.....+.|||... ...+++.=|||+|+++|.-+-=..|-+. ..-...+.+.+..+.....-....|..+.. +.
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg 173 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEG 173 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTCCC---------------
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhcccccccccccccccccc
Confidence 1123466888763 4557889999999999998864333221 111223334333333221111112221110 00
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887 798 DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA 835 (870)
Q Consensus 798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~ 835 (870)
+.++. . ...+..|++.++|++.=...+.
T Consensus 174 ~~d~~-~---------~~~~~~~~sl~~Vi~~C~~hl~ 201 (229)
T 2yle_A 174 LGDED-E---------KRKISAIRSYRDVMKLCAAHLP 201 (229)
T ss_dssp ------C---------CSCCCCCCSHHHHHHHHHTTSS
T ss_pred ccccc-c---------cccccCcCCHHHHHHHHHhhcc
Confidence 00000 0 2456789999999877666543
No 434
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=94.22 E-value=0.0065 Score=59.49 Aligned_cols=81 Identities=20% Similarity=0.123 Sum_probs=59.7
Q ss_pred CcEEEEEcCCCCCcccCcccccccCcccccccccCc-CCCCCCccccCc----CCCCeEEecCCc-CCCCCCCccccccc
Q 002887 409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNS-LTGPVPEFLAEL----QSLRVLNLSGNN-LQGSLPSGLSEKVK 482 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l----~~L~~L~ls~N~-l~g~ip~~l~~~~~ 482 (870)
.+|+.|||+++.++..=-..+.+|++|+.|+|+++. ++..==..++.+ ++|+.|+|+++. +|..==..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886545668899999999999985 653211224443 479999999975 66322235677888
Q ss_pred CCccccc
Q 002887 483 NGSLSLS 489 (870)
Q Consensus 483 ~~~l~~~ 489 (870)
|+.|+++
T Consensus 141 L~~L~L~ 147 (176)
T 3e4g_A 141 LKYLFLS 147 (176)
T ss_dssp CCEEEEE
T ss_pred CCEEECC
Confidence 8888876
No 435
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=94.05 E-value=0.03 Score=60.41 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=62.0
Q ss_pred CcEEEEEcCCCCCcccCcc-cccccCccc-ccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 409 PRIISINLSSSGIAGDIVP-YIFSLTSIE-SLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip~-~~~~l~~L~-~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
..++.|+|.+| ++ .|++ .|.+|++|+ .|+|.+ +++-.-+..|.+|++|+.|+|++|+++.--+..+.++++|+.+
T Consensus 250 ~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 250 KYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 47899999998 77 5655 599999999 999999 7774445789999999999999999995555577888877765
Q ss_pred c
Q 002887 487 S 487 (870)
Q Consensus 487 ~ 487 (870)
.
T Consensus 327 y 327 (329)
T 3sb4_A 327 Y 327 (329)
T ss_dssp E
T ss_pred c
Confidence 3
No 436
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.72 E-value=0.29 Score=54.84 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=48.6
Q ss_pred ccccccCcEEEEEEEEC---------CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEEE
Q 002887 567 RVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIYE 636 (870)
Q Consensus 567 ~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~E 636 (870)
+.+..|-...+|+.... ++.+++|+-.... ...-...+|..+++.+...++ .++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 45777888899998876 5778888864432 222234688999988854344 45555443 268999
Q ss_pred EccCCch
Q 002887 637 FMANGNL 643 (870)
Q Consensus 637 y~~~gsL 643 (870)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998765
No 437
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=93.20 E-value=0.01 Score=65.31 Aligned_cols=58 Identities=14% Similarity=0.191 Sum_probs=30.1
Q ss_pred cCcccccccccCcCCCCCCcccc---CcCCCCeEEecCCcCCCC----CCCcccccccCCccccc
Q 002887 432 LTSIESLDLSKNSLTGPVPEFLA---ELQSLRVLNLSGNNLQGS----LPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 432 l~~L~~L~Ls~N~l~g~iP~~~~---~l~~L~~L~ls~N~l~g~----ip~~l~~~~~~~~l~~~ 489 (870)
+++|+.|+|++|.+++..+..+. .+++|+.|+|+.|+|++. ++..+..+++|..|+++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~ 315 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMK 315 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECC
Confidence 55666666666665543333232 355666666666666542 33334445555555554
No 438
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.28 E-value=3.2 Score=45.77 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=24.4
Q ss_pred ceeCCCCCCCEEE------cCCCcEEEEeccCCcc
Q 002887 682 IVHRDVKSANILL------NEKFQAKLADFGLSRI 710 (870)
Q Consensus 682 IvHrDLKp~NILl------d~~~~vkL~DFGla~~ 710 (870)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4566799999988753
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=84.64 E-value=0.1 Score=51.98 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCCccc----CcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCC
Q 002887 410 RIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N 467 (870)
.|+.|+|++|+|... |...+..=+.|+.|+|++|+|+.. |-+.|..-+.|+.|+|++|
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 455566666655532 222233345556666666655432 1222333344555666543
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=83.69 E-value=0.23 Score=49.35 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=56.2
Q ss_pred CcEEEEEcCCC-CCcc----cCcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCCCCC----C
Q 002887 409 PRIISINLSSS-GIAG----DIVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQGSLP----S 475 (870)
Q Consensus 409 ~~l~~l~L~~n-~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g~ip----~ 475 (870)
..++.|+|++| +|.. .|-..+..=+.|+.|+|++|++.-. |-+.|..-+.|+.|+|++|+|+..-- +
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 47889999986 7653 2455566678999999999999732 33445456899999999999974311 2
Q ss_pred cccccccCCccccc
Q 002887 476 GLSEKVKNGSLSLS 489 (870)
Q Consensus 476 ~l~~~~~~~~l~~~ 489 (870)
.|.....|..|+++
T Consensus 121 aL~~N~tL~~L~L~ 134 (197)
T 1pgv_A 121 STLVTQSIVEFKAD 134 (197)
T ss_dssp HTTTTCCCSEEECC
T ss_pred HHhhCCceeEEECC
Confidence 23334446666665
No 441
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=81.23 E-value=1.1 Score=49.62 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=47.0
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS 489 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~ 489 (870)
.|+.|.|.+ ++.-.-+..|.+|++|+.|+|++|+++ .||...-...+|+.|.|.+| ++---...+..+.+|+.+.+.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 466677764 555222345777888888888888777 45544333577788877744 552223355566666666553
No 442
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=79.27 E-value=1.7 Score=48.13 Aligned_cols=76 Identities=9% Similarity=0.124 Sum_probs=47.5
Q ss_pred cEEEEEcCCCCCc----ccCc-ccccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCCcCCCCCCCcccccccC
Q 002887 410 RIISINLSSSGIA----GDIV-PYIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKN 483 (870)
Q Consensus 410 ~l~~l~L~~n~l~----G~ip-~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~ 483 (870)
.|+.|+|.+|.+. ..|+ ..|.+|++|+.|+|. |+++ .| ...|.+|++|+.|+|.+| ++---+..+..+ +|
T Consensus 272 ~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L 347 (401)
T 4fdw_A 272 ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GI 347 (401)
T ss_dssp TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CC
T ss_pred CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CC
Confidence 5677777766654 1243 347778888888887 4465 34 345677788888888554 552223455666 67
Q ss_pred Cccccc
Q 002887 484 GSLSLS 489 (870)
Q Consensus 484 ~~l~~~ 489 (870)
+.+.+.
T Consensus 348 ~~l~l~ 353 (401)
T 4fdw_A 348 KEVKVE 353 (401)
T ss_dssp CEEEEC
T ss_pred CEEEEc
Confidence 766665
No 443
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=76.10 E-value=7.2 Score=38.99 Aligned_cols=116 Identities=9% Similarity=0.083 Sum_probs=78.1
Q ss_pred ccccceeEEEEEecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL 693 (870)
Q Consensus 614 ~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL 693 (870)
.||+++.. ..-.+.+...+.|+.-+.+ ..+- .-+.++...+++++.+|+....+++.. +|--|+|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f~---~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNH--TPFD---NIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTS--EEGG---GGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCccc--CCHH---HHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence 67888766 4555555555555544322 2221 224677889999999999988776643 78899999999
Q ss_pred EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002887 694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQ 764 (870)
Q Consensus 694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~ 764 (870)
++.++.+++.=.|+...+ +|. ..++..=.-.+=+++..+++++..|.
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999877764333 121 11222223457788899999987764
No 444
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=70.52 E-value=7.5 Score=38.95 Aligned_cols=115 Identities=10% Similarity=0.075 Sum_probs=75.6
Q ss_pred ccccceeEEEEEecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHH-HHHhCCCCCceeCCCCCCCE
Q 002887 614 HHKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLE-YLHNGCKPPIVHRDVKSANI 692 (870)
Q Consensus 614 ~H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~-yLH~~~~~~IvHrDLKp~NI 692 (870)
.||.+ -...-.+.+...+.|+--+++.-...+ +.++...+++++.+++.... +++ .-+|--|+|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-----~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-----RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-----HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-----HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceE
Confidence 57777 334446666777767655443222233 35778889999999888766 555 347889999999
Q ss_pred EEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002887 693 LLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQ 764 (870)
Q Consensus 693 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~ 764 (870)
++|.++.+++.=.|+-..+ +|.-+ ++.-=.-.+=+++..++.++..|.
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999887764433 22211 111223356778888888876554
No 445
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=70.36 E-value=0.86 Score=44.33 Aligned_cols=65 Identities=11% Similarity=0.103 Sum_probs=43.2
Q ss_pred CcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCc-CCCCCCCccccc----ccCCccccc
Q 002887 425 IVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNN-LQGSLPSGLSEK----VKNGSLSLS 489 (870)
Q Consensus 425 ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~-l~g~ip~~l~~~----~~~~~l~~~ 489 (870)
+|.....--.|+.|||+++.++-.==..+..+++|+.|+|+++. ++..-=..++.+ ++|..|+++
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls 122 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEII 122 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEE
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcC
Confidence 34433223479999999998874423447889999999999995 653222234442 357888886
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=63.75 E-value=0.7 Score=52.36 Aligned_cols=59 Identities=7% Similarity=0.001 Sum_probs=17.6
Q ss_pred ccccccccCcEEEEEEEECC--eeEEE------EEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEe
Q 002887 565 FERVLGKGGFGTVYHGYLDD--KQVAV------KMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCD 626 (870)
Q Consensus 565 f~~~LG~G~fG~Vy~~~~~~--~~vAV------K~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~ 626 (870)
+.+.|| ||.||+|.+.+ .+||| |..+... ......|.+|..+++..+|+|+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 446777 99999999874 57888 7665432 223356888899999999999999887763
No 447
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=63.56 E-value=50 Score=30.47 Aligned_cols=89 Identities=11% Similarity=0.130 Sum_probs=56.8
Q ss_pred ccceecCCCCCCccEEEEeeeeeccCCCCCCCCceEEEEcceeeEEEEcCCCcc---ceeEEEEEecCCCceEEEEeec-
Q 002887 90 RNCYTLRPPNGDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAWDSVQLQDPRS---IITKEIIHMPNKDYIHVCLVNT- 165 (870)
Q Consensus 90 ~ncY~l~~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~v~~~~~~~---~~~~e~~~~~~~~~~~vcl~~t- 165 (870)
.=-|++ .+.+.|.|.|++.|--|..+ .-.++|+|+|..-.+|.++.... -....+-+--.++.=.|-|..+
T Consensus 40 ~v~~~V-~v~~aG~Y~l~~ryang~~~----~r~~~l~VNG~~~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~~~ 114 (145)
T 2w3j_A 40 SIVWSL-SAASAKTYTAQIRFGNGGTS----ARRATVVVNDSQIKTLDFPTNSNWTQWQTVNVDIPLKAGTNSIKLVAET 114 (145)
T ss_dssp EEEEEE-EESSCEEEEEEEEEECCSSS----CCCEEEEETTEEEEEECCCCCSCTTSCEEEEEEEEECSEEEEEEEEECS
T ss_pred EEEEEE-ECCCCeEEEEEEEEECCCCC----CeEEEEEECCeEeeEEEecCCCCCCeeEEEEEEEEECCCceEEEEEEec
Confidence 335666 34667899998887533322 35799999999888887643321 1112333334555556666664
Q ss_pred CCCCceeeeeeeeecCCC
Q 002887 166 DSGIPFISALELRPLTNS 183 (870)
Q Consensus 166 ~~~~pfis~lEl~~l~~~ 183 (870)
+.|-|-|..|+|.+.+..
T Consensus 115 ~~g~~niD~i~v~~~~~~ 132 (145)
T 2w3j_A 115 ADGLANIDSIRVTGNGIT 132 (145)
T ss_dssp TTCCCEEEEEEECSTTEE
T ss_pred CcCCEEEEEEEEEcCCCC
Confidence 356799999999876643
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=58.83 E-value=3.6 Score=30.04 Aligned_cols=13 Identities=38% Similarity=0.388 Sum_probs=5.8
Q ss_pred HHHhhhhhccccc
Q 002887 527 LAILQNLRRRKQA 539 (870)
Q Consensus 527 ~~~~~~~rrrk~~ 539 (870)
+.+++++|||+++
T Consensus 29 ~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 29 LGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHhhhhHhh
Confidence 3334445555443
No 449
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=55.41 E-value=9.8 Score=41.07 Aligned_cols=74 Identities=8% Similarity=0.219 Sum_probs=46.6
Q ss_pred cEEEEEcCCCCCcccCc-ccccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCCcCCCCCCC-cccccccCCcc
Q 002887 410 RIISINLSSSGIAGDIV-PYIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGNNLQGSLPS-GLSEKVKNGSL 486 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N~l~g~ip~-~l~~~~~~~~l 486 (870)
.++.+.|.. ++. .|+ ..|.+|++|+.+.|.+|.++ .| +..|.++.+|+.++|..| ++ .|+. .+.++.+|..+
T Consensus 264 ~l~~i~l~~-~i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 264 ALKTLNFYA-KVK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTI 338 (379)
T ss_dssp TCCEEEECC-CCS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCC
T ss_pred hhccccccc-cce-eccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEE
Confidence 455555543 344 333 34777888888888887777 44 356778888888888654 44 4433 45666666665
Q ss_pred cc
Q 002887 487 SL 488 (870)
Q Consensus 487 ~~ 488 (870)
.+
T Consensus 339 ~i 340 (379)
T 4h09_A 339 SY 340 (379)
T ss_dssp CC
T ss_pred EE
Confidence 54
No 450
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=54.70 E-value=8.3 Score=42.07 Aligned_cols=73 Identities=19% Similarity=0.192 Sum_probs=43.1
Q ss_pred cEEEEEcCCCCCcccCc-ccccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCCcCCCCCC-CcccccccCCcc
Q 002887 410 RIISINLSSSGIAGDIV-PYIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGNNLQGSLP-SGLSEKVKNGSL 486 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N~l~g~ip-~~l~~~~~~~~l 486 (870)
.++.+.|..+ ++ .|+ ..|.+|++|+.++|.++ ++ .| ...|.++++|+.++|..| ++ .|+ ..+..+.+|+.+
T Consensus 298 ~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i 371 (394)
T 4fs7_A 298 SLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKV 371 (394)
T ss_dssp TCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEE
T ss_pred cccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEE
Confidence 4556666543 44 343 34677777887777643 55 44 345677777887777665 54 333 345556666655
Q ss_pred cc
Q 002887 487 SL 488 (870)
Q Consensus 487 ~~ 488 (870)
.+
T Consensus 372 ~l 373 (394)
T 4fs7_A 372 EL 373 (394)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 451
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=54.05 E-value=1e+02 Score=28.05 Aligned_cols=89 Identities=10% Similarity=0.110 Sum_probs=56.0
Q ss_pred CcccceecCCCCCCccEEEEeeeeeccCCCCCCCCceEEEEcceee-EEEEcCCCcc--c-eeEEEEEecCCCceEEEEe
Q 002887 88 GIRNCYTLRPPNGDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAW-DSVQLQDPRS--I-ITKEIIHMPNKDYIHVCLV 163 (870)
Q Consensus 88 g~~ncY~l~~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w-~~v~~~~~~~--~-~~~e~~~~~~~~~~~vcl~ 163 (870)
|..=-|++ .+.+.|.|-|++.|.-|... .-.++|+|+|... .+|.++.... . ....+-+.-..+.=.|.|.
T Consensus 39 g~~v~~~V-~v~~aG~Y~l~~ryan~~~~----~~~~~l~VNG~~~~~~v~~p~Tg~w~~w~~~~~~v~L~aG~ntI~l~ 113 (144)
T 2w47_A 39 GGYIEWNV-NAPSSGSYALIFRYANGTTA----NRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVANLNQGNNVIRAT 113 (144)
T ss_dssp TCEEEEEE-EESSSEEEEEEEEEECCSSS----CCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEE
T ss_pred CCEEEEEE-ECCCCcEEEEEEEEECCCCC----CeEEEEEECCeEeeeEEEecCCCCCCeeEEEEEEEEECCCccEEEEE
Confidence 33445666 34667899998887755332 3579999999874 6776643221 1 1123224445555667776
Q ss_pred ec-CCCCceeeeeeeeecC
Q 002887 164 NT-DSGIPFISALELRPLT 181 (870)
Q Consensus 164 ~t-~~~~pfis~lEl~~l~ 181 (870)
.+ +.|-|.|..|+|.+.+
T Consensus 114 ~~~~~g~~niD~i~v~~~~ 132 (144)
T 2w47_A 114 AIASDGGPNVDYLKVFSAN 132 (144)
T ss_dssp ECSTTCCCEEEEEEEEECT
T ss_pred EeCCCCCEEEeEEEEEeCC
Confidence 54 4567999999998864
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=51.28 E-value=3.3 Score=30.17 Aligned_cols=15 Identities=20% Similarity=0.151 Sum_probs=6.7
Q ss_pred HHHHHhhhhhccccc
Q 002887 525 ALLAILQNLRRRKQA 539 (870)
Q Consensus 525 ~~~~~~~~~rrrk~~ 539 (870)
+++.++.++|||+++
T Consensus 27 ~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 27 LGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHCSC
T ss_pred HHHHHHhheehhhhh
Confidence 333444445555444
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=48.53 E-value=4.6 Score=29.45 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=6.2
Q ss_pred HHHhhhhhcccccC
Q 002887 527 LAILQNLRRRKQAG 540 (870)
Q Consensus 527 ~~~~~~~rrrk~~~ 540 (870)
+.+++++|||++++
T Consensus 28 ~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 28 LTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHTTCSSC
T ss_pred HHHHHHhhhhhhhh
Confidence 33344455554443
No 454
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=46.90 E-value=7.9 Score=42.24 Aligned_cols=55 Identities=16% Similarity=0.273 Sum_probs=42.7
Q ss_pred CcEEEEEcCCCCCcccCc-ccccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCC
Q 002887 409 PRIISINLSSSGIAGDIV-PYIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGN 467 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N 467 (870)
..|+.++|.++ ++ .|+ ..|.+|++|+.++|..| ++ .| ...|.++++|+.++|..|
T Consensus 320 ~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 320 TSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 36778888643 65 554 45889999999999877 66 45 457899999999999765
No 455
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=45.34 E-value=18 Score=39.34 Aligned_cols=73 Identities=16% Similarity=0.335 Sum_probs=42.3
Q ss_pred cEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCC-CccccCcCCCCeEEecCCcCCCCCCC-cccccccCCcc
Q 002887 410 RIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPV-PEFLAELQSLRVLNLSGNNLQGSLPS-GLSEKVKNGSL 486 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~i-P~~~~~l~~L~~L~ls~N~l~g~ip~-~l~~~~~~~~l 486 (870)
.++.+.|. ++++ .|+. .|.+|++|+.++|..| ++ .| ...|.++.+|+.+.|..| ++ .|+. .+.++.+|+.+
T Consensus 289 ~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 289 ALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNI 362 (394)
T ss_dssp TCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEE
T ss_pred ccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEE
Confidence 45555554 3444 3443 3667777777777654 44 33 345677777777777544 44 4443 45566666655
Q ss_pred cc
Q 002887 487 SL 488 (870)
Q Consensus 487 ~~ 488 (870)
.+
T Consensus 363 ~~ 364 (394)
T 4gt6_A 363 EY 364 (394)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 456
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=40.94 E-value=15 Score=40.04 Aligned_cols=72 Identities=18% Similarity=0.295 Sum_probs=48.6
Q ss_pred CcEEEEEcCCCCCcccCc-ccccccCcccccccccCcCCCCCC-ccccCcCCCCeEEecCCcCCCCCCCcccccccCCcc
Q 002887 409 PRIISINLSSSGIAGDIV-PYIFSLTSIESLDLSKNSLTGPVP-EFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSL 486 (870)
Q Consensus 409 ~~l~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l 486 (870)
..|+.++|..+ ++ .|. ..|.+|++|+.+.|..| ++ .|+ ..|.++++|+.+++.+|.... ..+..+..|+.+
T Consensus 311 ~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i 383 (394)
T 4gt6_A 311 ISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNL 383 (394)
T ss_dssp TTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---
T ss_pred CCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEE
Confidence 36788888753 55 454 45889999999999754 66 565 578999999999999886431 233444444444
Q ss_pred c
Q 002887 487 S 487 (870)
Q Consensus 487 ~ 487 (870)
.
T Consensus 384 ~ 384 (394)
T 4gt6_A 384 P 384 (394)
T ss_dssp -
T ss_pred E
Confidence 3
No 457
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=40.00 E-value=1.4e+02 Score=27.16 Aligned_cols=85 Identities=16% Similarity=0.132 Sum_probs=53.4
Q ss_pred cceecCCCCCCccEEEEeeeeeccCCCCCCCCceEEEEcceee--EEEEcCCCcc--c-eeEEEEEecCCCceEEEEeec
Q 002887 91 NCYTLRPPNGDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAW--DSVQLQDPRS--I-ITKEIIHMPNKDYIHVCLVNT 165 (870)
Q Consensus 91 ncY~l~~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w--~~v~~~~~~~--~-~~~e~~~~~~~~~~~vcl~~t 165 (870)
=-|++ .+.+.|+|.+++.|--|.-+ .-..+|+|+|..- .+|.++.... . ...++-+--.++.-.|-|...
T Consensus 41 v~~~V-~v~~aG~Y~l~~ryang~~~----~r~~~l~VNG~~~g~~~v~~p~Tg~W~~w~t~~~~v~L~aG~ntI~l~~~ 115 (139)
T 2w87_A 41 VVWAI-DATSSGRRTLTIRYANGGTA----NRNGSLVINGGSNGNYTVSLPTTGAWTTWQTATIDVDLVQGNNIVQLSAT 115 (139)
T ss_dssp EEEEE-EESSCEEEEEEEEEECCSSS----CCCEEEEETTTTTCEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEEES
T ss_pred EEEEE-ECCCCcEEEEEEEEECCCCC----CceEEEEECCEEcceeEEEecCCCCCCccEEEEEEEEECCCceEEEEEEc
Confidence 35565 34667899998887554322 2469999999876 6787643321 1 112333334455555666665
Q ss_pred C-CCCceeeeeeeeec
Q 002887 166 D-SGIPFISALELRPL 180 (870)
Q Consensus 166 ~-~~~pfis~lEl~~l 180 (870)
+ .|-|-|..|+|.+-
T Consensus 116 ~~~g~~niD~i~v~~~ 131 (139)
T 2w87_A 116 TAEGLPNIDSLSVVGG 131 (139)
T ss_dssp STTCCCEEEEEEEESS
T ss_pred CCCCCEEEEEEEEecC
Confidence 3 56799999999763
No 458
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=37.34 E-value=2.1e+02 Score=25.16 Aligned_cols=85 Identities=13% Similarity=0.146 Sum_probs=51.1
Q ss_pred CcccceecCCCCCCccEEEEeeeeeccCCCCCCCCceEEEEcceeeE-EEEcCCCcc-ceeE--EEEEecCCCceEEEEe
Q 002887 88 GIRNCYTLRPPNGDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAWD-SVQLQDPRS-IITK--EIIHMPNKDYIHVCLV 163 (870)
Q Consensus 88 g~~ncY~l~~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~-~v~~~~~~~-~~~~--e~~~~~~~~~~~vcl~ 163 (870)
|..=-|++ .+...|.|-|++.|.-|.. ..-.++|+|+|.... ++.++.... ..+. .+-+.-.++.=.|-|.
T Consensus 38 g~~v~~~V-~v~~aG~Y~l~~rya~~~~----~~~~~~l~VnG~~~~~~v~~p~tg~W~~w~~~~~~v~L~aG~ntI~l~ 112 (127)
T 2vzp_A 38 GSSVEWTV-TVPSAGTYDVVVRYANGTT----TSRPLDFSVNGSISASGVAFGSTGTWPAWTTKTVRVTLAAGVNKIKAV 112 (127)
T ss_dssp TCEEEEEE-EESSSEEEEEEEEEECCSS----SCCCEEEEETTEEEEEEECCCCCSSTTCCEEEEEEEEECSEEEEEEEE
T ss_pred CCEEEEEE-EcCCCCEEEEEEEEEcCCC----CCeEEEEEECCEEeeeEEEecCCCCCCceEEEEEEEEECCCceEEEEE
Confidence 44446776 3466789999988776542 235799999998864 376643211 1122 2333345555556665
Q ss_pred ec-CCCCceeeeeee
Q 002887 164 NT-DSGIPFISALEL 177 (870)
Q Consensus 164 ~t-~~~~pfis~lEl 177 (870)
.. +.+.|-|..|+|
T Consensus 113 ~~~~~~~~niD~i~v 127 (127)
T 2vzp_A 113 ATTANGGPNVDKITL 127 (127)
T ss_dssp ECSTTCCCEEEEEEC
T ss_pred EeCCCCCeEEEEEEC
Confidence 54 456688887765
No 459
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=35.97 E-value=28 Score=37.33 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=53.2
Q ss_pred cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCC-ccccCcCCCCeEEecCCcCCCCCC-CcccccccCCccc
Q 002887 410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVP-EFLAELQSLRVLNLSGNNLQGSLP-SGLSEKVKNGSLS 487 (870)
Q Consensus 410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP-~~~~~l~~L~~L~ls~N~l~g~ip-~~l~~~~~~~~l~ 487 (870)
.++.+.|..+ ++-.=...+.++.+|+.+.|..+ ++ .|+ ..|.++++|+.++|.+|.++ .|+ ..+.++.+|..+.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~ 316 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVT 316 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEE
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCCCCCEEE
Confidence 5666677654 44222345788999999999754 54 344 45788999999999999887 454 4677778888776
Q ss_pred c
Q 002887 488 L 488 (870)
Q Consensus 488 ~ 488 (870)
+
T Consensus 317 l 317 (379)
T 4h09_A 317 L 317 (379)
T ss_dssp C
T ss_pred c
Confidence 5
No 460
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=27.25 E-value=2.7e+02 Score=25.78 Aligned_cols=84 Identities=12% Similarity=0.027 Sum_probs=51.4
Q ss_pred CCCCccEEEEeeeeeccCC-----C-CCCCCceEEEEcceeeEEEEcCCCc--cce-eEEEEEecCCCceEEEEeec--C
Q 002887 98 PNGDVKFLIRARFMYGNYD-----G-LDKAPSFDLMLGADAWDSVQLQDPR--SII-TKEIIHMPNKDYIHVCLVNT--D 166 (870)
Q Consensus 98 ~~~~~~ylvR~~f~ygnyd-----~-~~~~p~Fd~~~~~~~w~~v~~~~~~--~~~-~~e~~~~~~~~~~~vcl~~t--~ 166 (870)
+.+.|+|.++..|.-|... + ....-..+|+|+|..=.++.++... ... ...+-+--..+.-.|-|.+. .
T Consensus 56 ~~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~~v~fp~Tg~W~~~~~~tv~V~L~aG~NtI~~~~~~~~ 135 (156)
T 2wz8_A 56 VPQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEKGHYFFNTRGWNTYRTDIIDVYLNAGNNTIRFYNGTSG 135 (156)
T ss_dssp ESSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCEEEEECCCSSTTCCEEEEEEEEECSEEEEEEEECCSTT
T ss_pred cCCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceeeEEEeCCCCCCCcceEEEEEEEECCCceEEEEEecCCC
Confidence 4667899999987655321 0 1123569999999875566654221 222 22334445566677888776 4
Q ss_pred CCCceeeeeeeeecC
Q 002887 167 SGIPFISALELRPLT 181 (870)
Q Consensus 167 ~~~pfis~lEl~~l~ 181 (870)
..-|-|-.|+|.++.
T Consensus 136 ~~~pdiD~i~v~~~~ 150 (156)
T 2wz8_A 136 SYAPNIDKIAIAALE 150 (156)
T ss_dssp CBCCEEEEEEEEC--
T ss_pred CCCcEEEEEEEeccc
Confidence 445999999987764
No 461
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.56 E-value=2.2e+02 Score=30.30 Aligned_cols=77 Identities=17% Similarity=0.166 Sum_probs=43.6
Q ss_pred eEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHH--HHHHHHHHhCC-CCCcee-CCCCCCCEEEcCCCc-EEEEe
Q 002887 630 NMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASES--AQGLEYLHNGC-KPPIVH-RDVKSANILLNEKFQ-AKLAD 704 (870)
Q Consensus 630 ~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~i--a~aL~yLH~~~-~~~IvH-rDLKp~NILld~~~~-vkL~D 704 (870)
...++|+|.+|..|.+.-...-.+.+.. +.+.++ +-+++.+..+. ..+.+. .--.+.|||+++++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 4669999999776654321110112222 222332 33556665543 233332 235788999987555 88999
Q ss_pred ccCCcc
Q 002887 705 FGLSRI 710 (870)
Q Consensus 705 FGla~~ 710 (870)
-+++..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 988854
No 462
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.81 E-value=6.7e+02 Score=28.85 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=50.6
Q ss_pred eEEEEEecCCeEEEEEEEccCCchhhhhh----------hcccc-----cccHHHHHHHHHHHH--HHHHHHHhCCCCCc
Q 002887 620 ILVGYCDEGANMGLIYEFMANGNLQAHLL----------EDKAD-----TLCWERRLQIASESA--QGLEYLHNGCKPPI 682 (870)
Q Consensus 620 ~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~----------~~~~~-----~l~~~~~~~i~~~ia--~aL~yLH~~~~~~I 682 (870)
..+.....+....+ .|++++.++.+.+. +.... ...|..+..++..+| ..+.|+=.
T Consensus 403 ~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG------ 475 (614)
T 3ls8_A 403 TPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG------ 475 (614)
T ss_dssp CCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred eccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee------
Confidence 34444555555544 47777655554442 21111 123556666666655 34566643
Q ss_pred eeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887 683 VHRDVKSANILLNEKFQAKLADFGLSR 709 (870)
Q Consensus 683 vHrDLKp~NILld~~~~vkL~DFGla~ 709 (870)
-+|=+++|||++.+|++.=+|||.+-
T Consensus 476 -igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 -VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp -CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred -ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 26889999999999999999999873
Done!