Query         002887
Match_columns 870
No_of_seqs    630 out of 3800
Neff          8.0 
Searched_HMMs 13730
Date          Mon Mar 25 05:27:36 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002887.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/002887hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 3.9E-48 2.8E-52  414.5  20.7  256  564-834    11-271 (276)
  2 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0   9E-48 6.6E-52  416.5  20.2  266  552-835     6-292 (299)
  3 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 1.5E-47 1.1E-51  407.4  20.0  251  564-834     8-260 (263)
  4 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 2.6E-47 1.9E-51  407.4  21.1  253  563-834    15-268 (272)
  5 d1opja_ d.144.1.7 (A:) Abelson 100.0   2E-47 1.4E-51  411.4  19.4  254  563-834    19-274 (287)
  6 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 9.3E-47 6.8E-51  402.3  20.1  248  564-828     8-259 (271)
  7 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 2.6E-46 1.9E-50  400.5  20.7  248  567-834    13-268 (277)
  8 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 6.1E-46 4.5E-50  399.0  22.9  249  568-835    16-271 (285)
  9 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0   6E-46 4.3E-50  393.5  22.4  250  564-833     7-258 (258)
 10 d1yhwa1 d.144.1.7 (A:249-541)  100.0   6E-46 4.4E-50  400.4  22.1  245  564-828    23-269 (293)
 11 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 4.2E-46 3.1E-50  408.4  20.5  253  563-831    39-322 (325)
 12 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 8.2E-46 5.9E-50  398.2  22.2  254  565-835    11-272 (283)
 13 d2j4za1 d.144.1.7 (A:126-388)  100.0 3.8E-46 2.8E-50  396.0  19.2  242  563-828     8-254 (263)
 14 d2jfla1 d.144.1.7 (A:21-308) S 100.0 7.9E-46 5.8E-50  398.8  20.5  247  564-828    15-268 (288)
 15 d2java1 d.144.1.7 (A:3-271) Se 100.0 3.2E-46 2.3E-50  398.0  15.9  249  564-828     7-265 (269)
 16 d1byga_ d.144.1.7 (A:) Carboxy 100.0 8.5E-46 6.2E-50  393.0  18.3  249  564-836    10-260 (262)
 17 d1fmka3 d.144.1.7 (A:249-533)  100.0   1E-45 7.3E-50  397.2  18.9  253  563-834    19-272 (285)
 18 d1t4ha_ d.144.1.7 (A:) Protein 100.0 2.1E-45 1.6E-49  391.7  20.6  245  564-828    12-265 (270)
 19 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 9.2E-46 6.7E-50  398.1  15.9  246  563-828    10-260 (288)
 20 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 2.5E-45 1.8E-49  398.0  17.6  254  564-834    16-300 (301)
 21 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 7.3E-45 5.4E-49  388.7  19.5  257  563-839     9-272 (273)
 22 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 2.5E-45 1.8E-49  401.6  14.5  256  565-828    10-297 (322)
 23 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 2.2E-44 1.6E-48  393.4  21.7  253  564-835    12-272 (317)
 24 d1ywna1 d.144.1.7 (A:818-1166) 100.0 2.1E-44 1.5E-48  390.3  21.2  257  563-835    15-296 (299)
 25 d1koaa2 d.144.1.7 (A:5915-6264 100.0 1.9E-44 1.4E-48  398.3  21.1  248  563-828    28-279 (350)
 26 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 9.1E-45 6.6E-49  394.0  17.3  247  563-828    11-263 (307)
 27 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 3.8E-44 2.7E-48  389.4  21.9  241  564-828    18-266 (309)
 28 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 3.9E-44 2.8E-48  389.9  21.3  255  564-835    30-293 (311)
 29 d1koba_ d.144.1.7 (A:) Twitchi 100.0 5.6E-44   4E-48  394.9  20.6  248  563-828    31-282 (352)
 30 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0   1E-43 7.5E-48  387.0  22.4  257  563-835    25-307 (311)
 31 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 5.1E-44 3.7E-48  387.2  19.8  257  563-836    15-297 (299)
 32 d1jksa_ d.144.1.7 (A:) Death-a 100.0 7.2E-44 5.3E-48  384.9  19.6  247  563-828    12-270 (293)
 33 d1vjya_ d.144.1.7 (A:) Type I  100.0 8.6E-44 6.3E-48  386.0  19.9  265  565-837     7-299 (303)
 34 d1u46a_ d.144.1.7 (A:) Activat 100.0 6.2E-44 4.5E-48  381.2  16.9  252  564-833    11-272 (273)
 35 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 6.6E-44 4.8E-48  387.9  16.7  255  564-835    23-294 (308)
 36 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 1.3E-43 9.5E-48  385.8  18.2  252  564-835    13-285 (309)
 37 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 3.5E-43 2.6E-47  385.9  21.7  244  563-828     7-260 (337)
 38 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 2.5E-43 1.8E-47  377.5  19.7  256  563-834     9-275 (277)
 39 d1fota_ d.144.1.7 (A:) cAMP-de 100.0   5E-43 3.7E-47  381.8  20.0  241  563-828     6-256 (316)
 40 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.6E-42 1.2E-46  370.7  21.4  246  564-828     6-269 (277)
 41 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 1.4E-42   1E-46  381.4  18.9  244  567-828    18-271 (335)
 42 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 3.3E-42 2.4E-46  372.9  20.5  255  567-828     4-279 (299)
 43 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0 3.5E-42 2.5E-46  380.3  18.6  240  564-828    44-293 (350)
 44 d1xjda_ d.144.1.7 (A:) Protein 100.0 2.7E-42 1.9E-46  376.7  17.2  244  563-828     4-254 (320)
 45 d1tkia_ d.144.1.7 (A:) Titin,  100.0   5E-42 3.6E-46  374.9  18.0  246  564-828     8-257 (321)
 46 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.5E-41 1.1E-45  377.3  19.4  244  564-828     7-264 (364)
 47 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 2.6E-41 1.9E-45  365.7  20.8  258  565-828     6-282 (298)
 48 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 2.1E-41 1.5E-45  361.7  14.4  236  563-828     6-254 (273)
 49 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 8.7E-41 6.3E-45  359.4  18.8  257  565-828     6-280 (286)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 1.8E-40 1.3E-44  360.2  21.0  258  564-828    10-292 (305)
 51 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 1.4E-39 9.9E-44  360.2  21.2  255  564-828    23-302 (350)
 52 d1ckia_ d.144.1.7 (A:) Casein  100.0 5.5E-39   4E-43  347.5  20.9  259  563-835     9-278 (299)
 53 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 7.4E-39 5.4E-43  349.5  21.9  260  564-828    13-304 (318)
 54 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 3.6E-39 2.7E-43  352.2  18.4  249  563-828    26-291 (322)
 55 d1csna_ d.144.1.7 (A:) Casein  100.0 7.3E-39 5.3E-43  345.4  20.2  257  563-835     7-278 (293)
 56 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 5.9E-39 4.3E-43  354.5  18.9  257  564-833    21-307 (346)
 57 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 3.1E-39 2.3E-43  356.6  16.6  258  565-829    12-295 (345)
 58 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 4.3E-38 3.1E-42  345.0  24.3  252  563-828    37-318 (328)
 59 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 2.6E-38 1.9E-42  340.6  21.2  257  565-828     6-282 (292)
 60 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 2.1E-37 1.5E-41  343.2  23.7  254  565-829    21-311 (355)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 4.8E-37 3.5E-41  339.3  19.0  254  564-828    21-300 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 1.5E-33 1.1E-37  312.6  19.6  263  563-834    15-335 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.8 8.9E-21 6.5E-25  189.7  11.9  161  565-753     4-189 (191)
 64 d1ogqa_ c.10.2.8 (A:) Polygala  99.7 5.5E-18   4E-22  182.4   9.4  125  362-490     2-134 (313)
 65 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.0 1.1E-10   8E-15  115.3   7.9   98  394-491     8-112 (192)
 66 d1ogqa_ c.10.2.8 (A:) Polygala  99.0 3.5E-11 2.5E-15  128.3   4.4   91  408-502   220-312 (313)
 67 d2ifga3 c.10.2.7 (A:36-191) Hi  99.0 4.4E-10 3.2E-14  107.1   9.0  107  387-498     3-118 (156)
 68 d1w8aa_ c.10.2.7 (A:) Slit {Fr  98.8 1.7E-09 1.3E-13  106.5   5.9   89  408-498    53-141 (192)
 69 d1dcea3 c.10.2.2 (A:444-567) R  98.7 9.2E-09 6.7E-13   93.7   6.1   78  409-489    20-98  (124)
 70 d1dcea3 c.10.2.2 (A:444-567) R  98.6 1.4E-08   1E-12   92.4   6.7   74  413-491     2-75  (124)
 71 d1p9ag_ c.10.2.7 (G:) von Will  98.5   4E-08 2.9E-12  101.6   7.8   88  408-498   123-210 (266)
 72 d1p9ag_ c.10.2.7 (G:) von Will  98.5 5.5E-08   4E-12  100.5   7.3   94  399-495    15-114 (266)
 73 d1ozna_ c.10.2.7 (A:) Reticulo  98.5 3.4E-08 2.5E-12  103.1   4.4   89  408-498   152-240 (284)
 74 d1xkua_ c.10.2.7 (A:) Decorin   98.5 1.3E-07 9.3E-12   99.5   8.8   92  394-489    10-108 (305)
 75 d1a9na_ c.10.2.4 (A:) Spliceso  98.4 9.1E-08 6.6E-12   91.2   5.1   78  409-489    18-95  (162)
 76 d1a9na_ c.10.2.4 (A:) Spliceso  98.2 2.6E-07 1.9E-11   88.0   3.5   82  408-494    40-123 (162)
 77 d1j7la_ d.144.1.6 (A:) Type II  98.2 6.6E-06 4.8E-10   83.8  14.0  132  572-710    25-213 (263)
 78 d1xkua_ c.10.2.7 (A:) Decorin   98.2 6.8E-07   5E-11   93.7   6.0   79  410-489   172-250 (305)
 79 d1ozna_ c.10.2.7 (A:) Reticulo  98.1 8.7E-07 6.3E-11   92.0   5.9   83  408-490   128-210 (284)
 80 d2omza2 c.10.2.1 (A:33-416) In  98.1 8.6E-07 6.3E-11   95.5   5.1   76  408-489   306-381 (384)
 81 d1h6ua2 c.10.2.1 (A:36-262) In  98.0 2.6E-06 1.9E-10   85.2   5.3   76  408-489   150-225 (227)
 82 d2ifga3 c.10.2.7 (A:36-191) Hi  98.0   3E-06 2.2E-10   79.8   5.4   79  413-492    12-91  (156)
 83 d1xwdc1 c.10.2.7 (C:18-259) Fo  97.8 5.4E-06 3.9E-10   83.4   5.4   97  394-491     8-113 (242)
 84 d2omxa2 c.10.2.1 (A:37-235) In  97.8 1.2E-05 8.8E-10   78.5   6.2   73  410-488    63-135 (199)
 85 d1h6ta2 c.10.2.1 (A:31-240) In  97.7 1.2E-05   9E-10   79.2   5.6   75  409-489   134-208 (210)
 86 d2omza2 c.10.2.1 (A:33-416) In  97.7 1.6E-05 1.2E-09   85.2   5.9   75  409-489    44-118 (384)
 87 d1h6ta2 c.10.2.1 (A:31-240) In  97.6 2.1E-05 1.5E-09   77.5   6.0   74  410-489    69-142 (210)
 88 d1nd4a_ d.144.1.6 (A:) Aminogl  97.6 0.00015 1.1E-08   73.0  12.0  130  568-710    17-205 (255)
 89 d1m9la_ c.10.3.1 (A:) Outer ar  97.6 1.4E-06 9.8E-11   85.7  -3.7   78  408-490    47-124 (198)
 90 d1m9la_ c.10.3.1 (A:) Outer ar  97.4 1.9E-06 1.4E-10   84.6  -4.8   80  409-494    70-151 (198)
 91 d2omxa2 c.10.2.1 (A:37-235) In  97.4 5.9E-05 4.3E-09   73.4   5.8   76  409-490    40-115 (199)
 92 d1koha1 c.10.2.3 (A:201-362) m  97.3 1.9E-05 1.3E-09   74.6   0.8   41  430-470    62-104 (162)
 93 d1jl5a_ c.10.2.6 (A:) Leucine   97.3 0.00014   1E-08   76.2   7.3   74  408-491    57-130 (353)
 94 d1h6ua2 c.10.2.1 (A:36-262) In  97.2 0.00013 9.1E-09   72.4   5.9   76  409-490    41-116 (227)
 95 d1jl5a_ c.10.2.6 (A:) Leucine   97.2 0.00013 9.7E-09   76.4   5.7   64  408-480   283-346 (353)
 96 d2pula1 d.144.1.6 (A:5-396) Me  96.9  0.0011 8.3E-08   71.2  10.2   75  567-643    32-118 (392)
 97 d1xwdc1 c.10.2.7 (C:18-259) Fo  96.8 0.00064 4.6E-08   67.5   6.1   77  409-488   153-232 (242)
 98 d1koha1 c.10.2.3 (A:201-362) m  96.6 0.00017 1.3E-08   67.7   0.2   79  408-487    64-152 (162)
 99 d2astb2 c.10.1.3 (B:2136-2419)  96.1  0.0002 1.4E-08   73.8  -2.5   83  408-490    45-130 (284)
100 d1zyla1 d.144.1.6 (A:4-328) Rd  96.1   0.006 4.4E-07   63.4   8.8  133  575-710    36-220 (325)
101 d1z7xw1 c.10.1.1 (W:1-460) Rib  95.5 0.00074 5.4E-08   73.0  -1.5   17  429-445    51-67  (460)
102 d2astb2 c.10.1.3 (B:2136-2419)  95.4  0.0023 1.7E-07   65.4   2.2   59  430-488   172-232 (284)
103 d1nw1a_ d.144.1.8 (A:) Choline  95.3   0.027   2E-06   59.9  10.7   72  567-644    48-129 (395)
104 d2ppqa1 d.144.1.6 (A:5-320) Ho  95.1   0.042 3.1E-06   56.2  11.0  140  568-709    25-212 (316)
105 d2ca6a1 c.10.1.2 (A:2-345) Rna  94.5  0.0021 1.5E-07   67.4  -1.2   63  410-472   187-258 (344)
106 d1z7xw1 c.10.1.1 (W:1-460) Rib  94.4  0.0024 1.7E-07   68.8  -1.1   81  409-489     2-92  (460)
107 d2ca6a1 c.10.1.2 (A:2-345) Rna  93.4  0.0047 3.4E-07   64.6  -1.2   81  409-489   158-251 (344)
108 d1pgva_ c.10.1.1 (A:) Tropomod  93.2  0.0061 4.5E-07   56.9  -0.6   42  429-470    40-85  (167)
109 d1pgva_ c.10.1.1 (A:) Tropomod  91.1   0.031 2.2E-06   51.8   1.5   62  409-470    44-113 (167)
110 d1io0a_ c.10.1.1 (A:) Tropomod  88.8   0.027   2E-06   52.0  -1.0   85  409-493    17-114 (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  81.3   0.058 4.2E-06   49.6  -2.8   82  409-490    46-141 (166)
112 d2o14a1 b.18.1.32 (A:14-159) H  69.6      23  0.0017   30.7  11.8   82   88-182    62-144 (146)
113 d1ji6a1 b.18.1.3 (A:503-652) d  30.0 1.2E+02  0.0085   26.0   9.4   74  102-181    62-149 (150)
114 d1cjaa_ d.144.1.3 (A:) Actin-f  28.6      94  0.0069   30.2   9.1  135  569-708    76-235 (342)
115 d1dlca1 b.18.1.3 (A:500-644) d  20.6 2.3E+02   0.017   23.8  11.3   76  100-181    58-145 (145)

No 1  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-48  Score=414.45  Aligned_cols=256  Identities=30%  Similarity=0.509  Sum_probs=203.4

Q ss_pred             hccccccccCcEEEEEEEECCeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      .+.+.||+|+||+||+|++++ .||||+++..  .....+.|++|++++++++|||||++++++.+ ...++||||+++|
T Consensus        11 ~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g   88 (276)
T d1uwha_          11 TVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGS   88 (276)
T ss_dssp             CCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEE
T ss_pred             EEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCC
Confidence            346789999999999998765 5999998754  34456789999999999999999999999865 5689999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|.+++.... ..+++..++.|+.||++||+|||++   +|+||||||+|||+++++.+||+|||+++............
T Consensus        89 ~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~  164 (276)
T d1uwha_          89 SLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE  164 (276)
T ss_dssp             EHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC-----------
T ss_pred             CHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCccccc
Confidence            9999986533 4699999999999999999999998   99999999999999999999999999998765444444455


Q ss_pred             cccCCCCccCccccccC---CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887          722 TVVGTPGYLDPEYYISN---RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD  798 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~---~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  798 (870)
                      ...||+.|||||++.+.   .++.++|||||||++|||+||+.||........+...+.    .+..    .+.+ ....
T Consensus       165 ~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~----~~~~----~p~~-~~~~  235 (276)
T d1uwha_         165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG----RGYL----SPDL-SKVR  235 (276)
T ss_dssp             -CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH----HTSC----CCCG-GGSC
T ss_pred             ccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHh----cCCC----CCcc-hhcc
Confidence            67899999999999643   489999999999999999999999987654433332222    2211    1111 1112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      ...+..+.+++.+||+.+|++||||+||++.|+.+.
T Consensus       236 ~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~  271 (276)
T d1uwha_         236 SNCPKAMKRLMAECLKKKRDERPLFPQILASIELLA  271 (276)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            234567889999999999999999999999998754


No 2  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=9e-48  Score=416.54  Aligned_cols=266  Identities=26%  Similarity=0.418  Sum_probs=206.6

Q ss_pred             ccCHHHHHHHHhhc-----------cccccccCcEEEEEEEEC--C---eeEEEEEeecc-chhhhHHHHHHHHHHHHhc
Q 002887          552 KFSYFDVLKITNNF-----------ERVLGKGGFGTVYHGYLD--D---KQVAVKMLSSS-SVQGYKQFQAEVELLIRAH  614 (870)
Q Consensus       552 ~~~~~dl~~~t~~f-----------~~~LG~G~fG~Vy~~~~~--~---~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~  614 (870)
                      .++|+|+.+++.+|           .+.||+|+||+||+|++.  +   ..||||++... .....++|.+|+++|++++
T Consensus         6 ~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~   85 (299)
T d1jpaa_           6 PFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD   85 (299)
T ss_dssp             GGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC
Confidence            34566666666655           368999999999999985  2   25899988764 3345678999999999999


Q ss_pred             cccceeEEEEEecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEE
Q 002887          615 HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILL  694 (870)
Q Consensus       615 H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILl  694 (870)
                      |||||+++|+|.+++..++|||||++|+|.+++... ...++|.+++.++.|||+||+|||++   +|+||||||+||||
T Consensus        86 HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl  161 (299)
T d1jpaa_          86 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILV  161 (299)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred             CCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEE
Confidence            999999999999999999999999999999987643 34699999999999999999999998   99999999999999


Q ss_pred             cCCCcEEEEeccCCccccCCCCccc---cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccc
Q 002887          695 NEKFQAKLADFGLSRIFPVEGGTHV---STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRT  770 (870)
Q Consensus       695 d~~~~vkL~DFGla~~~~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~  770 (870)
                      ++++.+||+|||+++.+........   .....||+.|+|||.+.++.++.++|||||||++|||+| |++||.......
T Consensus       162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999987643322221   122457899999999999999999999999999999998 899998665433


Q ss_pred             hHHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          771 LIGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       771 ~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      ...    . +..+         .....+.+.+..+.+++.+||+.+|++||||.||++.|+++++
T Consensus       242 ~~~----~-i~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         242 VIN----A-IEQD---------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHH----H-HHTT---------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHH----H-HHcC---------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            221    1 1111         1112233455678899999999999999999999999998764


No 3  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-47  Score=407.40  Aligned_cols=251  Identities=25%  Similarity=0.426  Sum_probs=198.0

Q ss_pred             hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887          564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN  642 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs  642 (870)
                      .+.+.||+|+||.||+|++. ++.||||+++... ...++|.+|++++++++|||||+++|+|...+..++||||+++|+
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~   86 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC   86 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             EEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCc
Confidence            35678999999999999986 7789999997643 345789999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887          643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT  722 (870)
Q Consensus       643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~  722 (870)
                      |.+++... ...++|..++.|+.|+|+||+|||+.   +|+||||||+|||+++++.+||+|||+++..... .......
T Consensus        87 L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~-~~~~~~~  161 (263)
T d1sm2a_          87 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSSTG  161 (263)
T ss_dssp             HHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC----------------
T ss_pred             HHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCC-Cceeecc
Confidence            99988643 35789999999999999999999998   9999999999999999999999999999876432 2222344


Q ss_pred             ccCCCCccCccccccCCCCccchHHHHHHHHHHHHhC-CCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITG-QPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG-~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ..||+.|+|||++.+..++.++|||||||++|||+|+ ++|+..........    . +..+.         ....+...
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~----~-i~~~~---------~~~~p~~~  227 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----D-ISTGF---------RLYKPRLA  227 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHH----H-HHHTC---------CCCCCTTS
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHH----H-HHhcC---------CCCCcccc
Confidence            6789999999999999999999999999999999995 55555433322221    1 11121         11122233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      ..++.+++.+||+.+|++||||+||++.|+++.
T Consensus       228 ~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         228 STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            467889999999999999999999999999875


No 4  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-47  Score=407.42  Aligned_cols=253  Identities=28%  Similarity=0.405  Sum_probs=207.8

Q ss_pred             hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      ..+.+.||+|+||.||+|.++ ++.||||+++... ...++|.+|++++++++|||||+++|++.+ +..++||||+++|
T Consensus        15 ~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g   92 (272)
T d1qpca_          15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENG   92 (272)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred             eEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCC
Confidence            345678999999999999997 6789999997653 345679999999999999999999998865 5678999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|.+++.......++|..+++|+.||++||+|||++   +|+||||||+||||++++.+||+|||+|+.+.. .......
T Consensus        93 ~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~-~~~~~~~  168 (272)
T d1qpca_          93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTARE  168 (272)
T ss_dssp             BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS-SCEECCT
T ss_pred             cHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccC-Ccccccc
Confidence            999988766666799999999999999999999998   999999999999999999999999999987643 2233344


Q ss_pred             cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ...||+.|+|||++.++.++.++|||||||++|||+||..|+........+.+.    +..+.         ....+...
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~----i~~~~---------~~~~p~~~  235 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----LERGY---------RMVRPDNC  235 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH----HHTTC---------CCCCCTTC
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH----HHhcC---------CCCCcccC
Confidence            567999999999999999999999999999999999965554433322222111    11111         11122334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      +..+.+++.+||+.+|++||||.||+++|++..
T Consensus       236 ~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            457889999999999999999999999999865


No 5  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=2e-47  Score=411.45  Aligned_cols=254  Identities=27%  Similarity=0.384  Sum_probs=213.3

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      ..+.+.||+|+||+||+|++.  ++.||||+++... ...++|.+|++++++++|||||+++++|.+++..++||||+++
T Consensus        19 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   97 (287)
T d1opja_          19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY   97 (287)
T ss_dssp             EEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccC
Confidence            345689999999999999985  8899999987653 3457899999999999999999999999999999999999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS  720 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~  720 (870)
                      |+|.+++.+.....+++..++.|+.|+++||+|||++   +|+||||||+||||++++.+||+|||+++..... .....
T Consensus        98 g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~-~~~~~  173 (287)
T d1opja_          98 GNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-TYTAH  173 (287)
T ss_dssp             CBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS-SSEEE
T ss_pred             cchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCC-Cceee
Confidence            9999999877777899999999999999999999998   9999999999999999999999999999876432 22333


Q ss_pred             ccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887          721 TTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN  800 (870)
Q Consensus       721 ~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~  800 (870)
                      ....|++.|+|||++.++.++.++|||||||++|||++|+.|+........+.+.    +..+         .....+..
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~----i~~~---------~~~~~~~~  240 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL----LEKD---------YRMERPEG  240 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----HHTT---------CCCCCCTT
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHH----HhcC---------CCCCCCcc
Confidence            4456899999999999999999999999999999999977766544332222221    2211         11223334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      .+..+.+++.+||+.||++||||.||++.|+.+.
T Consensus       241 ~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4567899999999999999999999999998764


No 6  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.3e-47  Score=402.32  Aligned_cols=248  Identities=21%  Similarity=0.304  Sum_probs=202.5

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      ++.+.||+|+||+||+|+..  ++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~g   87 (271)
T d1nvra_           8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSG   87 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCC
Confidence            45689999999999999985  88999999976533 3456789999999999999999999999999999999999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS  720 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~  720 (870)
                      |+|.+++..  ...+++.++..++.|+++||+|||++   +|+||||||+|||+++++++||+|||+|+.+.........
T Consensus        88 g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~  162 (271)
T d1nvra_          88 GELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  162 (271)
T ss_dssp             EEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             CcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCccccc
Confidence            999999863  35799999999999999999999998   9999999999999999999999999999977544433445


Q ss_pred             ccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887          721 TTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT  799 (870)
Q Consensus       721 ~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  799 (870)
                      ...+||+.|||||++.+..+ +.++||||+||++|||++|++||...........   .......         ......
T Consensus       163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~---~~~~~~~---------~~~~~~  230 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS---DWKEKKT---------YLNPWK  230 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH---HHHTTCT---------TSTTGG
T ss_pred             cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH---HHhcCCC---------CCCccc
Confidence            56789999999999988775 5789999999999999999999976554322211   1111110         011112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          800 NTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .....+.+++.+||+.||++|||++|+++
T Consensus       231 ~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         231 KIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            33456789999999999999999999864


No 7  
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-46  Score=400.53  Aligned_cols=248  Identities=25%  Similarity=0.412  Sum_probs=202.4

Q ss_pred             ccccccCcEEEEEEEEC----CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          567 RVLGKGGFGTVYHGYLD----DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       567 ~~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      +.||+|+||.||+|.+.    ++.||||+++...  ....++|.+|++++++++|||||+++|+|.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999864    4679999997542  2345679999999999999999999999965 567899999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc-c
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH-V  719 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~-~  719 (870)
                      |+|.+++.+  ...+++..++.++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++.+....... .
T Consensus        92 g~L~~~l~~--~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CcHHHHHhh--ccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence            999998864  35699999999999999999999998   99999999999999999999999999998764332222 2


Q ss_pred             cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887          720 STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD  798 (870)
Q Consensus       720 ~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  798 (870)
                      .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.........     ..+..+..         ...+
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~-----~~i~~~~~---------~~~p  232 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT-----AMLEKGER---------MGCP  232 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-----HHHHTTCC---------CCCC
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHH-----HHHHcCCC---------CCCC
Confidence            334578999999999999999999999999999999998 89999875543221     12222211         1223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          799 TNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      ...+..+.+++.+||+.||++|||++||+++|++..
T Consensus       233 ~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            344567889999999999999999999999998864


No 8  
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.1e-46  Score=399.04  Aligned_cols=249  Identities=22%  Similarity=0.394  Sum_probs=206.4

Q ss_pred             cccccCcEEEEEEEEC----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887          568 VLGKGGFGTVYHGYLD----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN  642 (870)
Q Consensus       568 ~LG~G~fG~Vy~~~~~----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs  642 (870)
                      .||+|+||.||+|.+.    +..||||+++... ....++|.+|++++++++|||||+++|+|.. +..++||||+++|+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~   94 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP   94 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence            4999999999999864    4479999997653 3456789999999999999999999999965 56899999999999


Q ss_pred             hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc-ccc
Q 002887          643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH-VST  721 (870)
Q Consensus       643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~-~~~  721 (870)
                      |.+++... ...+++..++.++.|+++||+|||++   +|+||||||+|||++.++.+||+|||+++.+....... ...
T Consensus        95 L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~  170 (285)
T d1u59a_          95 LHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS  170 (285)
T ss_dssp             HHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred             HHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhccccccccccccc
Confidence            99987543 35799999999999999999999998   99999999999999999999999999998764433222 223


Q ss_pred             cccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHH
Q 002887          722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTN  800 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~  800 (870)
                      ...||+.|+|||++.++.++.++|||||||++|||+| |+.||......+...     .+..+..         ...+..
T Consensus       171 ~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~-----~i~~~~~---------~~~p~~  236 (285)
T d1u59a_         171 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA-----FIEQGKR---------MECPPE  236 (285)
T ss_dssp             SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH-----HHHTTCC---------CCCCTT
T ss_pred             ccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCC---------CCCCCc
Confidence            4568999999999999999999999999999999998 999998765433221     2222221         122334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          801 TVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       801 ~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      .+..+.+++.+||+.+|++||||.+|++.|+.+..
T Consensus       237 ~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         237 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            45678899999999999999999999999998653


No 9  
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-46  Score=393.46  Aligned_cols=250  Identities=27%  Similarity=0.424  Sum_probs=210.5

Q ss_pred             hccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCCc
Q 002887          564 NFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANGN  642 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~gs  642 (870)
                      .|.+.||+|+||+||+|+++ ++.||||+++.... ..++|.+|++++++++||||++++|+|.+....++||||+++|+
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~   85 (258)
T d1k2pa_           7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC   85 (258)
T ss_dssp             CCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEE
T ss_pred             EEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCc
Confidence            35689999999999999997 67899999987543 45689999999999999999999999999999999999999999


Q ss_pred             hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887          643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT  722 (870)
Q Consensus       643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~  722 (870)
                      |.+++... ...+++..+++++.|+++||+|||+.   +|+||||||+|||+++++.+||+|||+++..... .......
T Consensus        86 l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~~~  160 (258)
T d1k2pa_          86 LLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYTSSVG  160 (258)
T ss_dssp             HHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS-SCCCCCC
T ss_pred             HHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCC-Cceeecc
Confidence            99987543 35688999999999999999999998   9999999999999999999999999999876433 2223344


Q ss_pred             ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ..||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+....     +..+.         ....+...
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~-----i~~~~---------~~~~p~~~  226 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-----IAQGL---------RLYRPHLA  226 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH-----HHTTC---------CCCCCTTC
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHH-----HHhCC---------CCCCcccc
Confidence            678999999999999999999999999999999998 8999987654433222     22221         11122234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVIELNDC  833 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~  833 (870)
                      ...+.+++.+||+.+|++|||++|+++.|.++
T Consensus       227 ~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         227 SEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             cHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            46788999999999999999999999998763


No 10 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-46  Score=400.38  Aligned_cols=245  Identities=22%  Similarity=0.339  Sum_probs=206.8

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      .+.+.||+|+||+||+|+..  ++.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus        23 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg  102 (293)
T d1yhwa1          23 TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG  102 (293)
T ss_dssp             CSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred             EEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCC
Confidence            34578999999999999975  8999999998776666678999999999999999999999999999999999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|.+++.+   ..+++.++..++.|++.||+|||++   +|+||||||+|||++.++++||+|||+++.+...  .....
T Consensus       103 ~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~--~~~~~  174 (293)
T d1yhwa1         103 SLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRS  174 (293)
T ss_dssp             BHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST--TCCBC
T ss_pred             cHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccc--ccccc
Confidence            99987743   4699999999999999999999998   9999999999999999999999999999876432  22335


Q ss_pred             cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ...||+.|+|||++.++.++.++|||||||++|||++|+.||........+...    ...+..      .  ...+...
T Consensus       175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~----~~~~~~------~--~~~~~~~  242 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI----ATNGTP------E--LQNPEKL  242 (293)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHHCSC------C--CSSGGGS
T ss_pred             ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHH----HhCCCC------C--CCCcccC
Confidence            568999999999999999999999999999999999999999865543333222    111110      0  1112334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      ...+.+++.+||+.||++|||+.|+++
T Consensus       243 s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         243 SAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            567889999999999999999999875


No 11 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-46  Score=408.40  Aligned_cols=253  Identities=27%  Similarity=0.415  Sum_probs=209.1

Q ss_pred             hhccccccccCcEEEEEEEECC-------eeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLDD-------KQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL  633 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~~-------~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L  633 (870)
                      ..+.+.||+|+||+||+|++.+       ..||||++.... ......+.+|+.++.++ +|||||+++++|.+.+..++
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  118 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEE
Confidence            3456899999999999998742       369999986543 34456789999999998 89999999999999999999


Q ss_pred             EEEEccCCchhhhhhhccc---------------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCE
Q 002887          634 IYEFMANGNLQAHLLEDKA---------------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANI  692 (870)
Q Consensus       634 V~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NI  692 (870)
                      ||||+++|+|.+++...+.                     ..+++..++.++.||++||+|||++   +|+||||||+||
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~Ni  195 (325)
T d1rjba_         119 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNV  195 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGE
T ss_pred             EEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhcc
Confidence            9999999999999975432                     3589999999999999999999998   999999999999


Q ss_pred             EEcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccch
Q 002887          693 LLNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTL  771 (870)
Q Consensus       693 Lld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~  771 (870)
                      |++.++.+||+|||+|+...............||+.|||||++.++.++.++|||||||++|||+| |++||.+......
T Consensus       196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            999999999999999987755444444456678999999999999999999999999999999998 8999987665444


Q ss_pred             HHHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 002887          772 IGQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELN  831 (870)
Q Consensus       772 l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~  831 (870)
                      +.+.+    ..+         ...+.+...+..+.+|+.+||+.+|++||||+||++.|.
T Consensus       276 ~~~~~----~~~---------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         276 FYKLI----QNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHH----HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHH----hcC---------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            43332    222         111223344567889999999999999999999999985


No 12 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.2e-46  Score=398.17  Aligned_cols=254  Identities=27%  Similarity=0.391  Sum_probs=200.2

Q ss_pred             ccccccccCcEEEEEEEECC------eeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887          565 FERVLGKGGFGTVYHGYLDD------KQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~~------~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      +.++||+|+||.||+|.+.+      ..||||++.... .....+|.+|++++++++|||||+++|+|.+....++||||
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~   90 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY   90 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEe
Confidence            45789999999999998752      369999997643 33456799999999999999999999999999999999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC-
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG-  716 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~-  716 (870)
                      +.+|++.+.+... ...++|.+++.++.|++.||+|||+.   +|+||||||+||||+.++.+||+|||+++.+..... 
T Consensus        91 ~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~  166 (283)
T d1mqba_          91 MENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  166 (283)
T ss_dssp             CTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred             cccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCcc
Confidence            9999998877543 35799999999999999999999998   999999999999999999999999999987643322 


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD  796 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  796 (870)
                      ........||+.|+|||++.++.++.++|||||||++|||++|..|+........+.+   . +..+         ....
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~---~-i~~~---------~~~~  233 (283)
T d1mqba_         167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK---A-INDG---------FRLP  233 (283)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH---H-HHTT---------CCCC
T ss_pred             ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH---H-Hhcc---------CCCC
Confidence            2223345689999999999999999999999999999999997655543332222221   1 2222         1122


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      .+...+..+.+|+.+||+.+|++||||.||+++|+++++
T Consensus       234 ~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         234 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            333455678999999999999999999999999998764


No 13 
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-46  Score=395.99  Aligned_cols=242  Identities=29%  Similarity=0.407  Sum_probs=204.6

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      +.+.+.||+|+||.||+|+..  ++.||+|++....   ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy   87 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   87 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEee
Confidence            455689999999999999986  7899999997543   23456789999999999999999999999999999999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT  717 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~  717 (870)
                      +++|+|.+++.+.  ..+++..+..++.||++||+|||++   +|+||||||+|||+++++.+||+|||+++.....   
T Consensus        88 ~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~---  159 (263)
T d2j4za1          88 APLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---  159 (263)
T ss_dssp             CTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC---
T ss_pred             cCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCC---
Confidence            9999999998643  4699999999999999999999998   9999999999999999999999999999865322   


Q ss_pred             cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887          718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF  797 (870)
Q Consensus       718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  797 (870)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........    .. .+.          ...
T Consensus       160 -~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~----i~-~~~----------~~~  223 (263)
T d2j4za1         160 -RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----IS-RVE----------FTF  223 (263)
T ss_dssp             -CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH----HH-TTC----------CCC
T ss_pred             -cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHH----HH-cCC----------CCC
Confidence             23456799999999999999999999999999999999999999976554333222    11 111          112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      +......+.+++.+||+.||++|||++|+++
T Consensus       224 p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         224 PDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            2233457889999999999999999999976


No 14 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.9e-46  Score=398.76  Aligned_cols=247  Identities=24%  Similarity=0.367  Sum_probs=207.0

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      ++.+.||+|+||.||+|+..  ++.||||++........+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus        15 ~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g   94 (288)
T d2jfla1          15 EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   94 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCC
Confidence            44578999999999999985  7889999998877777788999999999999999999999999999999999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|.+++.+. ...+++.++..++.||++||+|||++   +|+||||||+|||++.++++||+|||+++.....  .....
T Consensus        95 ~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~~~~~  168 (288)
T d2jfla1          95 AVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQRRD  168 (288)
T ss_dssp             EHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHH--HHHHT
T ss_pred             cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCC--ccccc
Confidence            999987643 35699999999999999999999998   9999999999999999999999999999764221  12234


Q ss_pred             cccCCCCccCccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887          722 TVVGTPGYLDPEYYI-----SNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD  796 (870)
Q Consensus       722 ~~~gt~~y~APE~~~-----~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  796 (870)
                      ...||+.|+|||++.     +..++.++|||||||++|||++|+.||........+.+...     +...     .  ..
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~-----~~~~-----~--~~  236 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK-----SEPP-----T--LA  236 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHH-----SCCC-----C--CS
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHc-----CCCC-----C--CC
Confidence            568999999999984     45588999999999999999999999987665554433221     1111     0  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .+......+.+++.+||+.||++|||+.|+++
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            12234567889999999999999999999875


No 15 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-46  Score=397.99  Aligned_cols=249  Identities=25%  Similarity=0.377  Sum_probs=192.5

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec--CCeEEEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE--GANMGLIYEF  637 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--~~~~~LV~Ey  637 (870)
                      ++.+.||+|+||+||+|+..  ++.||||++....  ....+.+.+|++++++++|||||++++++.+  ....++||||
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy   86 (269)
T d2java1           7 EVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEY   86 (269)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEEC
T ss_pred             EEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEec
Confidence            45689999999999999985  8899999997653  3345678999999999999999999999865  4568999999


Q ss_pred             ccCCchhhhhhhc--ccccccHHHHHHHHHHHHHHHHHHHhCC--CCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887          638 MANGNLQAHLLED--KADTLCWERRLQIASESAQGLEYLHNGC--KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV  713 (870)
Q Consensus       638 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~aL~yLH~~~--~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~  713 (870)
                      +++|+|.+++.+.  ....+++..++.++.|++.||+|||++.  ..+|+||||||+|||+++++.+||+|||+++.+..
T Consensus        87 ~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  166 (269)
T d2java1          87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH  166 (269)
T ss_dssp             CTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--
T ss_pred             CCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeeccc
Confidence            9999999998653  3457999999999999999999999862  12599999999999999999999999999987643


Q ss_pred             CCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887          714 EGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL  793 (870)
Q Consensus       714 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  793 (870)
                      .  ........||+.|+|||++.+..++.++|||||||++|||+||++||...........     +..+...       
T Consensus       167 ~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~-----i~~~~~~-------  232 (269)
T d2java1         167 D--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGK-----IREGKFR-------  232 (269)
T ss_dssp             -----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-----HHHTCCC-------
T ss_pred             C--CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHH-----HHcCCCC-------
Confidence            2  2233457899999999999999999999999999999999999999986554332222     2222221       


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                        ..+......+.+++.+||+.||++|||+.|+++
T Consensus       233 --~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         233 --RIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence              112223456889999999999999999999875


No 16 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.5e-46  Score=393.05  Aligned_cols=249  Identities=27%  Similarity=0.414  Sum_probs=202.3

Q ss_pred             hccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec-CCeEEEEEEEccCCc
Q 002887          564 NFERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE-GANMGLIYEFMANGN  642 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-~~~~~LV~Ey~~~gs  642 (870)
                      .+.+.||+|+||.||+|+++++.||||+++...  ..++|.+|++++++++||||++++|+|.+ ....++||||+++|+
T Consensus        10 ~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~   87 (262)
T d1byga_          10 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS   87 (262)
T ss_dssp             EEEEEEEECSSCEEEEEEETTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred             EEeEEEecCCCeEEEEEEECCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCC
Confidence            356889999999999999999999999997643  45779999999999999999999999865 456899999999999


Q ss_pred             hhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccccc
Q 002887          643 LQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVSTT  722 (870)
Q Consensus       643 L~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~~  722 (870)
                      |.+++.......++|..+++|+.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....     ....
T Consensus        88 L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~-----~~~~  159 (262)
T d1byga_          88 LVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-----TQDT  159 (262)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------------
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCC-----CCcc
Confidence            99999776656799999999999999999999998   999999999999999999999999999986522     2234


Q ss_pred             ccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          723 VVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       723 ~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ..+++.|+|||++.++.++.++|||||||++|||+| |++||........ ..++    ..+.         ..+.+...
T Consensus       160 ~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~-~~~i----~~~~---------~~~~~~~~  225 (262)
T d1byga_         160 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-VPRV----EKGY---------KMDAPDGC  225 (262)
T ss_dssp             --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-HHHH----TTTC---------CCCCCTTC
T ss_pred             ccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH-HHHH----HcCC---------CCCCCccC
Confidence            568899999999999999999999999999999998 6888876554432 2222    1121         12223334


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM  836 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~  836 (870)
                      ...+.+++.+||+.||++||||.||+++|+++..-
T Consensus       226 ~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         226 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            46788999999999999999999999999987543


No 17 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-45  Score=397.22  Aligned_cols=253  Identities=27%  Similarity=0.398  Sum_probs=202.9

Q ss_pred             hhccccccccCcEEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          563 NNFERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      ..+.+.||+|+||.||+|++. ++.||||+++... ...+.|.+|+.++++++|||||+++|+|.+ ++.++||||+++|
T Consensus        19 ~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g   96 (285)
T d1fmka3          19 LRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKG   96 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTC
T ss_pred             EEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCC
Confidence            456789999999999999997 6789999997553 345789999999999999999999999965 5688999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|...+.......++|.+++.|+.||++||+|||++   +|+||||||+||||++++++||+|||+++..... ......
T Consensus        97 ~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~-~~~~~~  172 (285)
T d1fmka3          97 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYTARQ  172 (285)
T ss_dssp             BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred             chhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCC-Cceeec
Confidence            999988776667799999999999999999999998   9999999999999999999999999999876322 223334


Q ss_pred             cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCHHH
Q 002887          722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDTNT  801 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~~~  801 (870)
                      ...||+.|+|||++..+.++.++|||||||++|||++|..|+........+...+    ..+         ...+.+...
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i----~~~---------~~~~~~~~~  239 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV----ERG---------YRMPCPPEC  239 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH----HTT---------CCCCCCTTS
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH----Hhc---------CCCCCCccc
Confidence            5679999999999999999999999999999999999766654433322222221    111         111223344


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          802 VWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       802 ~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      ..++.+++.+||+.+|++||+|.+|+++|++..
T Consensus       240 ~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         240 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            567889999999999999999999999999865


No 18 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-45  Score=391.68  Aligned_cols=245  Identities=27%  Similarity=0.447  Sum_probs=197.3

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec----CCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE----GANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~----~~~~~LV~  635 (870)
                      .|.+.||+|+||+||+|+..  ++.||+|++....  ....+.|.+|++++++++|||||++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            45678999999999999986  7789999987653  3345679999999999999999999999854    34678999


Q ss_pred             EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc-CCCcEEEEeccCCccccCC
Q 002887          636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN-EKFQAKLADFGLSRIFPVE  714 (870)
Q Consensus       636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld-~~~~vkL~DFGla~~~~~~  714 (870)
                      ||+++|+|.+++.+.  ..+++..+..++.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+++.... 
T Consensus        92 E~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~-  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  167 (270)
T ss_dssp             ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             eCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC-
Confidence            999999999998643  4789999999999999999999987 22399999999999996 578999999999986421 


Q ss_pred             CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887          715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ  794 (870)
Q Consensus       715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  794 (870)
                         .......||+.|+|||++.+ .++.++|||||||++|||++|+.||........+.+   . +..+.....      
T Consensus       168 ---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~---~-i~~~~~~~~------  233 (270)
T d1t4ha_         168 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYR---R-VTSGVKPAS------  233 (270)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHH---H-HTTTCCCGG------
T ss_pred             ---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHH---H-HHcCCCCcc------
Confidence               22345689999999998865 699999999999999999999999976543332222   1 112211111      


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                        .+.....++.+++.+||+.||++|||+.|+++
T Consensus       234 --~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         234 --FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             --GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --cCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence              11122346789999999999999999999975


No 19 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-46  Score=398.11  Aligned_cols=246  Identities=23%  Similarity=0.357  Sum_probs=203.1

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      +.+.+.||+|+||+||+|+..  ++.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy   89 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSY   89 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECC
T ss_pred             CEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEc
Confidence            456789999999999999985  8899999997643   23346789999999999999999999999999999999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT  717 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~  717 (870)
                      +++|+|.+++...  ..+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+|+.+......
T Consensus        90 ~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          90 AKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             cCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence            9999999988643  5799999999999999999999998   9999999999999999999999999999987544444


Q ss_pred             cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887          718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF  797 (870)
Q Consensus       718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  797 (870)
                      .......||+.|+|||++.+..++.++||||+||++|||++|+.||..........+.    . .+..          .+
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i----~-~~~~----------~~  229 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI----I-KLEY----------DF  229 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-TTCC----------CC
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHH----H-cCCC----------CC
Confidence            4455678999999999999999999999999999999999999999865543332221    1 1111          12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          798 DTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       798 ~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      +......+.+++.+||+.||++|||++|+++
T Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            2233456889999999999999999999754


No 20 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.5e-45  Score=398.00  Aligned_cols=254  Identities=29%  Similarity=0.432  Sum_probs=209.5

Q ss_pred             hccccccccCcEEEEEEEEC-------CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~  635 (870)
                      ++.+.||+|+||+||+|++.       ++.||||++..... ...++|.+|++++++++||||++++++|......++||
T Consensus        16 ~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~   95 (301)
T d1lufa_          16 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF   95 (301)
T ss_dssp             EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEE
Confidence            34578999999999999874       36899999976533 34567999999999999999999999999999999999


Q ss_pred             EEccCCchhhhhhhcc----------------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEE
Q 002887          636 EFMANGNLQAHLLEDK----------------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANIL  693 (870)
Q Consensus       636 Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NIL  693 (870)
                      ||+++|+|.+++....                      ...+++..++.|+.|++.||+|||+.   +|+||||||+|||
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~NIL  172 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL  172 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcccceE
Confidence            9999999999986432                      13589999999999999999999998   9999999999999


Q ss_pred             EcCCCcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCC-CCCCCCCccchH
Q 002887          694 LNEKFQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTLI  772 (870)
Q Consensus       694 ld~~~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~-~p~~~~~~~~~l  772 (870)
                      +|.++.+||+|||+++.+.............|++.|+|||.+.+..++.++|||||||++|||++|. +||......+..
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~  252 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI  252 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHH
Confidence            9999999999999998764444444445677899999999999999999999999999999999996 577765543332


Q ss_pred             HHHHHHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhh
Q 002887          773 GQWVSSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCL  834 (870)
Q Consensus       773 ~~~~~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~  834 (870)
                      ..     +.++...         ..+...+..+.+|+.+||+.+|++||||.||+++|+++.
T Consensus       253 ~~-----v~~~~~~---------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         253 YY-----VRDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HH-----HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HH-----HHcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            21     2223211         122334557889999999999999999999999999864


No 21 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-45  Score=388.69  Aligned_cols=257  Identities=25%  Similarity=0.344  Sum_probs=201.1

Q ss_pred             hhccccccccCcEEEEEEEEC-----CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE  636 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E  636 (870)
                      +++.+.||+|+||.||+|++.     +..||||.++... ....+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus         9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv~E   87 (273)
T d1mp8a_           9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME   87 (273)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEEEE
Confidence            445689999999999999874     3458899886543 3445679999999999999999999999964 67899999


Q ss_pred             EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887          637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~  716 (870)
                      |+++|+|.+++... ...+++..++.++.||++||+|||++   +|+||||||+||++++++.+||+|||+++.+... .
T Consensus        88 ~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~-~  162 (273)
T d1mp8a_          88 LCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-T  162 (273)
T ss_dssp             CCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             eccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCC-c
Confidence            99999999887543 35789999999999999999999998   9999999999999999999999999999876322 2


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG  795 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  795 (870)
                      ........||+.|+|||++.++.++.++|||||||++|||++ |++||............     ..+..         .
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i-----~~~~~---------~  228 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI-----ENGER---------L  228 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCC---------C
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHH-----HcCCC---------C
Confidence            223345678999999999999999999999999999999998 89999876655443321     12211         1


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHhHh
Q 002887          796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAMEIA  839 (870)
Q Consensus       796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e~~  839 (870)
                      ..+...+..+.+++.+||+.||++|||+.||++.|+.+++.+.+
T Consensus       229 ~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k~  272 (273)
T d1mp8a_         229 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA  272 (273)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhC
Confidence            12334456788999999999999999999999999998766543


No 22 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-45  Score=401.64  Aligned_cols=256  Identities=22%  Similarity=0.302  Sum_probs=200.1

Q ss_pred             ccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      +.+.||+|+||+||+|+..  ++.||+|+++... ....+++.+|+.+|++++|||||+++++|.+..+.++||||+++|
T Consensus        10 ~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg   89 (322)
T d1s9ja_          10 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   89 (322)
T ss_dssp             EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            4578999999999999985  8899999997653 334567899999999999999999999999999999999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      +|.+++.+.  ..+++..+..++.|+++||.|||+++  +|+||||||+|||+++++++||+|||+|+.+..    ....
T Consensus        90 ~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~--~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----~~~~  161 (322)
T d1s9ja_          90 SLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMAN  161 (322)
T ss_dssp             EHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH----HTC-
T ss_pred             cHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEccccCHHHeeECCCCCEEEeeCCCccccCC----Cccc
Confidence            999998643  46999999999999999999999731  799999999999999999999999999986532    1234


Q ss_pred             cccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc-------------------
Q 002887          722 TVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR-------------------  782 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~-------------------  782 (870)
                      ..+||+.|+|||++.+..++.++||||+||++|||++|+.||...........+.......                   
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG  241 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------------
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccc
Confidence            5689999999999999999999999999999999999999997654322111100000000                   


Q ss_pred             ------CCcchhccccc---CCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          783 ------GDIKNIVDHRL---QGDFD-TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       783 ------~~~~~i~d~~l---~~~~~-~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                            ....+..+...   ..... .....++.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                  00000000000   00000 112356889999999999999999999987


No 23 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-44  Score=393.36  Aligned_cols=253  Identities=26%  Similarity=0.405  Sum_probs=203.6

Q ss_pred             hccccccccCcEEEEEEEEC--Ce----eEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DK----QVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYE  636 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~----~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~E  636 (870)
                      ++.+.||+|+||+||+|.+.  ++    .||+|+++.. .....++|.+|++++++++|||||+++|+|.++ ..++++|
T Consensus        12 ~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e   90 (317)
T d1xkka_          12 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQ   90 (317)
T ss_dssp             EEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEE
T ss_pred             EEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEE
Confidence            45589999999999999975  33    5899988654 334567899999999999999999999999875 5678899


Q ss_pred             EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887          637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~  716 (870)
                      |+.+|+|.+.+... ...+++..++.++.|||+||+|||++   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        91 ~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          91 LMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             CCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred             eccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence            99999999987653 46799999999999999999999998   999999999999999999999999999998754444


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG  795 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  795 (870)
                      ........||+.|+|||++.++.++.++|||||||++|||+| |++||......... ..    +..+.         ..
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~-~~----i~~~~---------~~  232 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SI----LEKGE---------RL  232 (317)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH-HH----HHHTC---------CC
T ss_pred             cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH-HH----HHcCC---------CC
Confidence            444455679999999999999999999999999999999999 78998866544322 21    22221         11


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      ..+...+..+.+++.+||+.+|++|||+.||++.|+.+..
T Consensus       233 ~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         233 PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            2233445678899999999999999999999999988653


No 24 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-44  Score=390.28  Aligned_cols=257  Identities=29%  Similarity=0.397  Sum_probs=201.1

Q ss_pred             hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecC-CeEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEG-ANMG  632 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~-~~~~  632 (870)
                      +.+.+.||+|+||.||+|++.       ++.||||+++... ....+.+.+|...+.++ +|+||+.+++++.+. ...+
T Consensus        15 y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~   94 (299)
T d1ywna1          15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM   94 (299)
T ss_dssp             EEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred             EEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEE
Confidence            445689999999999999863       3679999997543 34456788888888887 789999999998664 4689


Q ss_pred             EEEEEccCCchhhhhhhccc--------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC
Q 002887          633 LIYEFMANGNLQAHLLEDKA--------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF  698 (870)
Q Consensus       633 LV~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~  698 (870)
                      +|||||++|+|.+++...+.              ..+++.+++.++.||++||+|||++   +|+||||||+||||++++
T Consensus        95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~  171 (299)
T d1ywna1          95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGG
T ss_pred             EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCC
Confidence            99999999999999975432              3589999999999999999999998   999999999999999999


Q ss_pred             cEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCC-CCCCCCCccchHHHHHH
Q 002887          699 QAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTLIGQWVS  777 (870)
Q Consensus       699 ~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~-~p~~~~~~~~~l~~~~~  777 (870)
                      ++||+|||+++...............||+.|+|||++.++.++.++|||||||++|||+||. +||........+.+   
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~---  248 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---  248 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH---
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH---
Confidence            99999999998765444444455678999999999999999999999999999999999974 67765544333322   


Q ss_pred             HHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          778 SMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       778 ~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                       .+..+..         ...+......+.+++.+||+.||++|||+.||+++|+++++
T Consensus       249 -~~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         249 -RLKEGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             -HHHHTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHhcCCC---------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             2222211         12223345578899999999999999999999999999864


No 25 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=1.9e-44  Score=398.34  Aligned_cols=248  Identities=20%  Similarity=0.299  Sum_probs=207.5

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      +.+.+.||+|+||.||+|+..  |+.||||++........+.+.+|+++|++++|||||++++++.+++..++|||||++
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  107 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG  107 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            456689999999999999985  899999999877666678899999999999999999999999999999999999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC--CCcEEEEeccCCccccCCCCcc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE--KFQAKLADFGLSRIFPVEGGTH  718 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~--~~~vkL~DFGla~~~~~~~~~~  718 (870)
                      |+|.+++.+. ...+++..+..|+.||+.||+|||++   +|+||||||+|||++.  ++.+||+|||+++.+...   .
T Consensus       108 g~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~---~  180 (350)
T d1koaa2         108 GELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK---Q  180 (350)
T ss_dssp             CBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT---S
T ss_pred             CCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccc---c
Confidence            9999988543 34699999999999999999999998   9999999999999964  678999999999876322   2


Q ss_pred             ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887          719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD  798 (870)
Q Consensus       719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  798 (870)
                      ......||+.|||||++.+..++.++|||||||++|||++|+.||........+...    .. +..      .+.....
T Consensus       181 ~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i----~~-~~~------~~~~~~~  249 (350)
T d1koaa2         181 SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV----KS-CDW------NMDDSAF  249 (350)
T ss_dssp             CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----HH-TCC------CSCCGGG
T ss_pred             ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH----Hh-CCC------CCCcccc
Confidence            334568999999999999999999999999999999999999999866544333222    11 110      0001111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          799 TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      ......+.+++.+||+.||++|||++|+++
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            223457889999999999999999999987


No 26 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=9.1e-45  Score=394.04  Aligned_cols=247  Identities=25%  Similarity=0.400  Sum_probs=189.5

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch-hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV-QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA  639 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~  639 (870)
                      +++.+.||+|+||+||+|+..  ++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~   90 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS   90 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence            456789999999999999986  78899999976543 234568899999999999999999999999999999999999


Q ss_pred             CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc---CCCcEEEEeccCCccccCCCC
Q 002887          640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN---EKFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld---~~~~vkL~DFGla~~~~~~~~  716 (870)
                      +|+|.+++.+  ...+++..+..++.|++.||+|||++   +|+||||||+|||+.   +++.+||+|||+++.....  
T Consensus        91 gg~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~--  163 (307)
T d1a06a_          91 GGELFDRIVE--KGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--  163 (307)
T ss_dssp             SCBHHHHHHT--CSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred             CCcHHHhhhc--ccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCC--
Confidence            9999999964  35799999999999999999999998   999999999999994   5789999999999865322  


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD  796 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  796 (870)
                       .......||+.|+|||++.+..++.++|||||||++|||++|++||...........    ... +..      .....
T Consensus       164 -~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~----i~~-~~~------~~~~~  231 (307)
T d1a06a_         164 -SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQ----ILK-AEY------EFDSP  231 (307)
T ss_dssp             ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH----HHT-TCC------CCCTT
T ss_pred             -CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHH----Hhc-cCC------CCCCc
Confidence             223456799999999999999999999999999999999999999986554332222    111 111      11111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .....+..+.+++.+||+.||++|||+.|+++
T Consensus       232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            22234567889999999999999999999986


No 27 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=3.8e-44  Score=389.35  Aligned_cols=241  Identities=26%  Similarity=0.372  Sum_probs=199.3

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM  638 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~  638 (870)
                      ...+.||+|+||.||+|+..  ++.||||++.....   ...+.+.+|++++++++|||||++++++.++...++|||||
T Consensus        18 ~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~   97 (309)
T d1u5ra_          18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC   97 (309)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEec
Confidence            34578999999999999975  88999999976532   34467899999999999999999999999999999999999


Q ss_pred             cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887          639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH  718 (870)
Q Consensus       639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~  718 (870)
                      ++|+|..++..  ...+++.++..++.||+.||.|||++   +|+||||||+|||+++++.+||+|||+++....     
T Consensus        98 ~~g~l~~~~~~--~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-----  167 (309)
T d1u5ra_          98 LGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  167 (309)
T ss_dssp             SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred             CCCchHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC-----
Confidence            99999766543  35799999999999999999999998   999999999999999999999999999986532     


Q ss_pred             ccccccCCCCccCcccccc---CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCC
Q 002887          719 VSTTVVGTPGYLDPEYYIS---NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQG  795 (870)
Q Consensus       719 ~~~~~~gt~~y~APE~~~~---~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~  795 (870)
                       .....||+.|||||++.+   +.++.++|||||||++|||++|+.||........+..    ..... ...     +  
T Consensus       168 -~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~----i~~~~-~~~-----~--  234 (309)
T d1u5ra_         168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNE-SPA-----L--  234 (309)
T ss_dssp             -BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH----HHHSC-CCC-----C--
T ss_pred             -CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHH----HHhCC-CCC-----C--
Confidence             234679999999999864   4589999999999999999999999976544332222    11111 111     1  


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          796 DFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       796 ~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                       .+......+.+++.+||+.||++|||+.|+++
T Consensus       235 -~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         235 -QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             -SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence             11223457889999999999999999999975


No 28 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-44  Score=389.93  Aligned_cols=255  Identities=28%  Similarity=0.412  Sum_probs=205.4

Q ss_pred             hccccccccCcEEEEEEEECC-----eeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEec-CCeEEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLDD-----KQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDE-GANMGLIYE  636 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~~-----~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-~~~~~LV~E  636 (870)
                      +|.++||+|+||+||+|++..     ..||||+++.. .....++|.+|++++++++||||++++|+|.+ +...++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            457899999999999999742     35899999753 44556789999999999999999999999865 568899999


Q ss_pred             EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887          637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~  716 (870)
                      ||++|+|.+++.. ....+++..+++++.|+++||.|||+.   +|+||||||+|||+++++.+||+|||+++.......
T Consensus       110 ~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~  185 (311)
T d1r0pa_         110 YMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  185 (311)
T ss_dssp             CCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTC
T ss_pred             EeecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhcccccc
Confidence            9999999998754 345688999999999999999999998   999999999999999999999999999987643322


Q ss_pred             c--cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887          717 T--HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ  794 (870)
Q Consensus       717 ~--~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  794 (870)
                      .  .......||+.|+|||.+.++.++.++||||||+++|||+||+.||........+..++    ..+..         
T Consensus       186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i----~~g~~---------  252 (311)
T d1r0pa_         186 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL----LQGRR---------  252 (311)
T ss_dssp             CCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHH----HTTCC---------
T ss_pred             ccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHH----HcCCC---------
Confidence            2  12234578999999999999999999999999999999999888876543322222221    12211         


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          795 GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      ...+......+.+++.+||+.||++||+|.||++.|++++.
T Consensus       253 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         253 LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            11122334578899999999999999999999999998864


No 29 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=5.6e-44  Score=394.90  Aligned_cols=248  Identities=19%  Similarity=0.295  Sum_probs=208.1

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      +++.+.||+|+||.||+|+..  ++.||||++........+.+++|+++|++++|||||++++++.++...++||||+++
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~g  110 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSG  110 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCC
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            456689999999999999985  889999999877666667889999999999999999999999999999999999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEc--CCCcEEEEeccCCccccCCCCcc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLN--EKFQAKLADFGLSRIFPVEGGTH  718 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld--~~~~vkL~DFGla~~~~~~~~~~  718 (870)
                      |+|.+.+.. ....+++.++..|+.||+.||+|||++   +|+||||||+|||++  .++.+||+|||+|+.+...   .
T Consensus       111 g~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~---~  183 (352)
T d1koba_         111 GELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD---E  183 (352)
T ss_dssp             CBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT---S
T ss_pred             ChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCC---C
Confidence            999887753 334699999999999999999999998   999999999999998  6789999999999876432   2


Q ss_pred             ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887          719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD  798 (870)
Q Consensus       719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  798 (870)
                      ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+......+...    . .+..      .......
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i----~-~~~~------~~~~~~~  252 (352)
T d1koba_         184 IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV----K-RCDW------EFDEDAF  252 (352)
T ss_dssp             CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHH----H-HCCC------CCCSSTT
T ss_pred             ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----H-hCCC------CCCcccc
Confidence            334567999999999999999999999999999999999999999866544333222    1 1111      1111112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          799 TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       799 ~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      ......+.+++.+||+.||++|||+.|+++
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            234457889999999999999999999986


No 30 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-43  Score=386.97  Aligned_cols=257  Identities=26%  Similarity=0.394  Sum_probs=213.9

Q ss_pred             hhccccccccCcEEEEEEEEC-------CeeEEEEEeeccc-hhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSSS-VQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGL  633 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~L  633 (870)
                      ..+.+.||+|+||.||+|++.       ++.||||+++... .....+|.+|+.+++++ +|||||+++++|.+....++
T Consensus        25 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~l  104 (311)
T d1t46a_          25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV  104 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEE
Confidence            446789999999999999862       4689999997653 34456789999999999 69999999999999999999


Q ss_pred             EEEEccCCchhhhhhhccc----------------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887          634 IYEFMANGNLQAHLLEDKA----------------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK  697 (870)
Q Consensus       634 V~Ey~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~  697 (870)
                      ||||+++|+|.+++.+...                ..+++..++.++.||++||+|||++   +++||||||+|||++.+
T Consensus       105 vmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHG  181 (311)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETT
T ss_pred             EEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccccccc
Confidence            9999999999999875432                3689999999999999999999999   99999999999999999


Q ss_pred             CcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002887          698 FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWV  776 (870)
Q Consensus       698 ~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~  776 (870)
                      +.+|++|||+++...............||+.|+|||++.++.++.++|||||||++|||+| |++|+........+.+.+
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i  261 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            9999999999997754444444556789999999999999999999999999999999999 556665554444333332


Q ss_pred             HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      ..    +         .....+...+..+.+|+.+||+.||++||||.||+++|++++.
T Consensus       262 ~~----~---------~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         262 KE----G---------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             HH----T---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hc----C---------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            22    1         1122223345678999999999999999999999999998764


No 31 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.1e-44  Score=387.21  Aligned_cols=257  Identities=30%  Similarity=0.461  Sum_probs=209.2

Q ss_pred             hhccccccccCcEEEEEEEEC---------CeeEEEEEeeccch-hhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSSV-QGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANM  631 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~~-~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~  631 (870)
                      +.+.+.||+|+||.||+|+..         +..||||+++.... ....++.+|...+.++ +|||||+++++|.++...
T Consensus        15 ~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~   94 (299)
T d1fgka_          15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL   94 (299)
T ss_dssp             EEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeE
Confidence            345689999999999999863         24699999976543 4457789999999998 899999999999999999


Q ss_pred             EEEEEEccCCchhhhhhhcc--------------cccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC
Q 002887          632 GLIYEFMANGNLQAHLLEDK--------------ADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK  697 (870)
Q Consensus       632 ~LV~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~  697 (870)
                      ++||||+++|+|.+++....              ...+++.+++.++.|++.||+|||+.   +|+||||||+|||++.+
T Consensus        95 ~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          95 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTED  171 (299)
T ss_dssp             EEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred             EEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecCC
Confidence            99999999999999997543              24689999999999999999999999   99999999999999999


Q ss_pred             CcEEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHH
Q 002887          698 FQAKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWV  776 (870)
Q Consensus       698 ~~vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~  776 (870)
                      +.+||+|||+++...............|++.|+|||.+.++.++.++|||||||++|||++ |++||.........    
T Consensus       172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~----  247 (299)
T d1fgka_         172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF----  247 (299)
T ss_dssp             CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH----
T ss_pred             CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHH----
Confidence            9999999999997755544444556779999999999999999999999999999999998 68888765543221    


Q ss_pred             HHHhhcCCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhH
Q 002887          777 SSMLARGDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAM  836 (870)
Q Consensus       777 ~~~~~~~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~  836 (870)
                       ..+..+.         ....+...+..+.+++.+||+.+|++|||+.||+++|+++++.
T Consensus       248 -~~i~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a~  297 (299)
T d1fgka_         248 -KLLKEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  297 (299)
T ss_dssp             -HHHHTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -HHHHcCC---------CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhhc
Confidence             1222221         1122223445788999999999999999999999999998764


No 32 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.2e-44  Score=384.91  Aligned_cols=247  Identities=23%  Similarity=0.337  Sum_probs=203.6

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch------hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV------QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLI  634 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV  634 (870)
                      +++.+.||+|+||+||+|+..  ++.||||++.....      ...+.+.+|+++|++++|||||++++++.+....++|
T Consensus        12 Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (293)
T d1jksa_          12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI   91 (293)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            455689999999999999985  88999999975422      2356799999999999999999999999999999999


Q ss_pred             EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC----cEEEEeccCCcc
Q 002887          635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF----QAKLADFGLSRI  710 (870)
Q Consensus       635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~----~vkL~DFGla~~  710 (870)
                      ||||++|+|.+++.+.  ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++    .+|++|||+++.
T Consensus        92 ~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          92 LELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            9999999999998653  4799999999999999999999998   999999999999998876    599999999987


Q ss_pred             ccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887          711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD  790 (870)
Q Consensus       711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d  790 (870)
                      ....   .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+......+..+    . .+...    
T Consensus       167 ~~~~---~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i----~-~~~~~----  234 (293)
T d1jksa_         167 IDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV----S-AVNYE----  234 (293)
T ss_dssp             CTTS---CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-TTCCC----
T ss_pred             cCCC---ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHH----H-hcCCC----
Confidence            6322   2334567999999999999999999999999999999999999999876544333221    1 11100    


Q ss_pred             cccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                        .........+..+.+++.+||+.||++|||++|+++
T Consensus       235 --~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         235 --FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             --CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              000001123456789999999999999999999975


No 33 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.6e-44  Score=385.96  Aligned_cols=265  Identities=23%  Similarity=0.322  Sum_probs=201.4

Q ss_pred             ccccccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCC----eEEEEEEEccC
Q 002887          565 FERVLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----NMGLIYEFMAN  640 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~LV~Ey~~~  640 (870)
                      +.+.||+|+||.||+|+++|+.||||+++..... ...++.|+..+.+++||||++++++|.+..    ..++|||||++
T Consensus         7 l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~   85 (303)
T d1vjya_           7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEEEECCSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccC
Confidence            4678999999999999999999999999755322 122344555566789999999999997643    57899999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCC-----CCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGC-----KPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG  715 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~-----~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~  715 (870)
                      |+|.+++.+   ..++|..+++++.|+|.||+|||+..     .++|+||||||+||||++++.+||+|||+++......
T Consensus        86 g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~  162 (303)
T d1vjya_          86 GSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT  162 (303)
T ss_dssp             CBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred             CCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCC
Confidence            999999964   46999999999999999999999731     3599999999999999999999999999998775433


Q ss_pred             Ccc--ccccccCCCCccCccccccCC------CCccchHHHHHHHHHHHHhCCCCCCCCCccc----------hHHHHHH
Q 002887          716 GTH--VSTTVVGTPGYLDPEYYISNR------LTEKSDVYSFGVVLLELITGQPVIQKTPQRT----------LIGQWVS  777 (870)
Q Consensus       716 ~~~--~~~~~~gt~~y~APE~~~~~~------~~~ksDVwS~GvvL~elltG~~p~~~~~~~~----------~l~~~~~  777 (870)
                      ...  ......||+.|+|||++.+..      ++.++|||||||+||||+||..|+.......          .......
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (303)
T d1vjya_         163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR  242 (303)
T ss_dssp             TEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred             cceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHH
Confidence            222  234568999999999987643      5678999999999999999998875432111          0111111


Q ss_pred             HHhhcCCcchhcccccCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhhHh
Q 002887          778 SMLARGDIKNIVDHRLQGDF-DTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLAME  837 (870)
Q Consensus       778 ~~~~~~~~~~i~d~~l~~~~-~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~~e  837 (870)
                      .....+.    .++.+.... ..+....+.+++.+||+.||++||||.||++.|+++...+
T Consensus       243 ~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         243 KVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence            2221111    111111111 2346677999999999999999999999999999877554


No 34 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.2e-44  Score=381.18  Aligned_cols=252  Identities=25%  Similarity=0.355  Sum_probs=197.0

Q ss_pred             hccccccccCcEEEEEEEEC-----CeeEEEEEeecc---chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD-----DKQVAVKMLSSS---SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~-----~~~vAVK~l~~~---~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~  635 (870)
                      ++.+.||+|+||.||+|++.     ...||||++...   .....++|.+|++++++++||||++++|+|.+ ...++||
T Consensus        11 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~   89 (273)
T d1u46a_          11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVT   89 (273)
T ss_dssp             EEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             EEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheee
Confidence            45678999999999999864     236899998754   23445789999999999999999999999976 4678999


Q ss_pred             EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887          636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG  715 (870)
Q Consensus       636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~  715 (870)
                      ||+++|++.+.+... ...+++..++.++.|+|+||.|||++   +|+||||||+|||++.++++||+|||+++......
T Consensus        90 e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          90 ELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             ECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             eeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            999999999887653 35699999999999999999999998   99999999999999999999999999999764433


Q ss_pred             Cccc-cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHh-CCCCCCCCCccchHHHHHHHHhhcCCcchhccccc
Q 002887          716 GTHV-STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELIT-GQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRL  793 (870)
Q Consensus       716 ~~~~-~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~ellt-G~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l  793 (870)
                      .... .....|+..|+|||++.+..++.++|||||||++|||+| |+.||..........    ...+.+.         
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~----~i~~~~~---------  232 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH----KIDKEGE---------  232 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH----HHHTSCC---------
T ss_pred             CcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHH----HHHhCCC---------
Confidence            3222 234567889999999999999999999999999999998 899998665443322    2222221         


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHh
Q 002887          794 QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDC  833 (870)
Q Consensus       794 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~  833 (870)
                      ..+.....+..+.+++.+||+.||++||||.||++.|++.
T Consensus       233 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            1112233445788999999999999999999999999874


No 35 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.6e-44  Score=387.88  Aligned_cols=255  Identities=25%  Similarity=0.410  Sum_probs=210.6

Q ss_pred             hccccccccCcEEEEEEEEC-------CeeEEEEEeecc-chhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD-------DKQVAVKMLSSS-SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~-------~~~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~  635 (870)
                      .+.+.||+|+||.||+|.+.       ++.||||+++.. .......|.+|++++++++||||+++++.|......++||
T Consensus        23 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          23 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEE
Confidence            45688999999999999874       468999999754 3344567899999999999999999999999999999999


Q ss_pred             EEccCCchhhhhhhccc--------ccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccC
Q 002887          636 EFMANGNLQAHLLEDKA--------DTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGL  707 (870)
Q Consensus       636 Ey~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGl  707 (870)
                      ||+++|+|.+++...+.        ..+++..+.+++.|+|+||.|||++   +|+||||||+|||+++++++||+|||+
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeeccc
Confidence            99999999998865432        3478999999999999999999998   999999999999999999999999999


Q ss_pred             CccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCC-CCCCCCCccchHHHHHHHHhhcCCcc
Q 002887          708 SRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTLIGQWVSSMLARGDIK  786 (870)
Q Consensus       708 a~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~-~p~~~~~~~~~l~~~~~~~~~~~~~~  786 (870)
                      ++.+.............||+.|+|||.+.++.++.++|||||||++|||+||+ +||........    ..... ++.. 
T Consensus       180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~----~~~i~-~~~~-  253 (308)
T d1p4oa_         180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----LRFVM-EGGL-  253 (308)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH----HHHHH-TTCC-
T ss_pred             ceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH----HHHHH-hCCC-
Confidence            98775444444445567899999999999999999999999999999999985 67765443322    22222 2221 


Q ss_pred             hhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          787 NIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       787 ~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                              ...+...+..+.+++.+||+.+|++||||.||+++|++.++
T Consensus       254 --------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         254 --------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             --------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                    11122344678999999999999999999999999987644


No 36 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-43  Score=385.78  Aligned_cols=252  Identities=29%  Similarity=0.448  Sum_probs=202.9

Q ss_pred             hccccccccCcEEEEEEEEC--Ce--eEEEEEeecc-chhhhHHHHHHHHHHHHh-ccccceeEEEEEecCCeEEEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DK--QVAVKMLSSS-SVQGYKQFQAEVELLIRA-HHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~--~vAVK~l~~~-~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      .+.+.||+|+||.||+|++.  +.  .||||+++.. .....+.|.+|+++|.++ +|||||+++|+|.+++..++||||
T Consensus        13 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey   92 (309)
T d1fvra_          13 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY   92 (309)
T ss_dssp             EEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             EEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEe
Confidence            35689999999999999985  43  5788888654 334567899999999998 799999999999999999999999


Q ss_pred             ccCCchhhhhhhc--------------ccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEE
Q 002887          638 MANGNLQAHLLED--------------KADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLA  703 (870)
Q Consensus       638 ~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~  703 (870)
                      +++|+|.+++...              ....++|..++.++.|||+||.|||+.   +|+||||||+|||++.++.+||+
T Consensus        93 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          93 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             CTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEEC
T ss_pred             cCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEEc
Confidence            9999999998653              236799999999999999999999998   99999999999999999999999


Q ss_pred             eccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCC-CCCCCCCccchHHHHHHHHhhc
Q 002887          704 DFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQ-PVIQKTPQRTLIGQWVSSMLAR  782 (870)
Q Consensus       704 DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~-~p~~~~~~~~~l~~~~~~~~~~  782 (870)
                      |||+++.....   .......||..|+|||.+.++.++.++|||||||++|||++|. +||.........    . .+.+
T Consensus       170 DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~----~-~i~~  241 (309)
T d1fvra_         170 DFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY----E-KLPQ  241 (309)
T ss_dssp             CTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH----H-HGGG
T ss_pred             ccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHH----H-HHHh
Confidence            99999764321   2223456899999999999999999999999999999999976 466554432221    1 1222


Q ss_pred             CCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          783 GDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       783 ~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      +.         ....+...+..+.+++.+||+.||++||||+||++.|+++++
T Consensus       242 ~~---------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         242 GY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             TC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cC---------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            21         112233445678899999999999999999999999999864


No 37 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.5e-43  Score=385.91  Aligned_cols=244  Identities=25%  Similarity=0.349  Sum_probs=205.0

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      +++.+.||+|+||.||+|+..  ++.||||++....   ....+.+.+|+.+|++++||||+++++++.+.+..++||||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey   86 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceec
Confidence            345689999999999999975  8899999998653   23456789999999999999999999999999999999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT  717 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~  717 (870)
                      |++|+|.+++.+.  ..+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+|+.....  .
T Consensus        87 ~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~--~  159 (337)
T d1o6la_          87 ANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--G  159 (337)
T ss_dssp             CTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT--T
T ss_pred             cCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccC--C
Confidence            9999999988643  4689999999999999999999999   9999999999999999999999999999865322  2


Q ss_pred             cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887          718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF  797 (870)
Q Consensus       718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  797 (870)
                      ......+||+.|+|||++.+..++.++||||+||++|||++|++||...........+    . .+..          .+
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i----~-~~~~----------~~  224 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI----L-MEEI----------RF  224 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-HCCC----------CC
T ss_pred             cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHH----h-cCCC----------CC
Confidence            2345578999999999999999999999999999999999999999876544332221    1 1111          12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887          798 DTNTVWKAVEIALACIHTISTRRPT-----MNQVVI  828 (870)
Q Consensus       798 ~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~  828 (870)
                      +......+.+++.+||+.||++||+     +.|+++
T Consensus       225 p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            2234456789999999999999995     777765


No 38 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=2.5e-43  Score=377.52  Aligned_cols=256  Identities=23%  Similarity=0.358  Sum_probs=200.4

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCC----eEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----NMGL  633 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~L  633 (870)
                      +.+.+.||+|+||.||+|+..  ++.||||+++...   ....+.|.+|++++++++||||+++++++....    ..++
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~l   88 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI   88 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             eEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEE
Confidence            345689999999999999975  8999999997643   234567999999999999999999999986543    3789


Q ss_pred             EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887          634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV  713 (870)
Q Consensus       634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~  713 (870)
                      ||||+++|+|.+++...  ..+++.++..++.|+++||+|||++   +|+||||||+|||++.++..+++|||.++....
T Consensus        89 vmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          89 VMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhcc
Confidence            99999999999987643  4799999999999999999999998   999999999999999999999999999876533


Q ss_pred             CCC-ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccc
Q 002887          714 EGG-THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHR  792 (870)
Q Consensus       714 ~~~-~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~  792 (870)
                      ... ........||+.|+|||++.+..++.++|||||||++|||+||++||..........    .....+...    + 
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~----~~~~~~~~~----~-  234 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY----QHVREDPIP----P-  234 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH----HHHHCCCCC----G-
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHH----HHHhcCCCC----C-
Confidence            222 223345689999999999999999999999999999999999999998655433322    222222111    0 


Q ss_pred             cCCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHhh
Q 002887          793 LQGDFDTNTVWKAVEIALACIHTISTRRP-TMNQVVIELNDCL  834 (870)
Q Consensus       793 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-sm~eVl~~L~~~~  834 (870)
                        .......+..+.+++.+|++.||++|| |++++++.|..+.
T Consensus       235 --~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         235 --SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             --GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             --chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence              011122345788999999999999999 8999999887753


No 39 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=5e-43  Score=381.80  Aligned_cols=241  Identities=24%  Similarity=0.343  Sum_probs=202.8

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEF  637 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey  637 (870)
                      +++.+.||+|+||+||+|+..  ++.||||+++...   ....+.+.+|+.++++++||||+++++++.+....++||||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~   85 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   85 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeee
Confidence            345689999999999999985  8899999997642   23456789999999999999999999999999999999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT  717 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~  717 (870)
                      +++|+|..++...  ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+....    
T Consensus        86 ~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~----  156 (316)
T d1fota_          86 IEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----  156 (316)
T ss_dssp             CCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS----
T ss_pred             cCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEecc----
Confidence            9999999888643  4678889999999999999999998   999999999999999999999999999987632    


Q ss_pred             cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCC
Q 002887          718 HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDF  797 (870)
Q Consensus       718 ~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~  797 (870)
                       ......||+.|+|||++.+..++.++||||+||++|||++|+.||..........+.    .. +..          ..
T Consensus       157 -~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i----~~-~~~----------~~  220 (316)
T d1fota_         157 -VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI----LN-AEL----------RF  220 (316)
T ss_dssp             -CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----HH-CCC----------CC
T ss_pred             -ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHH----Hc-CCC----------CC
Confidence             223568999999999999999999999999999999999999999876543333222    11 111          11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887          798 DTNTVWKAVEIALACIHTISTRRP-----TMNQVVI  828 (870)
Q Consensus       798 ~~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~  828 (870)
                      +......+.+++.+|++.+|++||     |++|+++
T Consensus       221 p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         221 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            222345688999999999999996     8999875


No 40 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.6e-42  Score=370.71  Aligned_cols=246  Identities=24%  Similarity=0.324  Sum_probs=202.4

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccchh---------hhHHHHHHHHHHHHhc-cccceeEEEEEecCCeE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ---------GYKQFQAEVELLIRAH-HKNLTILVGYCDEGANM  631 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~---------~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~  631 (870)
                      .+.+.||+|+||+||+|+..  ++.||||+++.....         ..+.+.+|+.++++++ ||||+++++++.+.+..
T Consensus         6 ~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~   85 (277)
T d1phka_           6 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFF   85 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             EEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcce
Confidence            45689999999999999984  899999999764321         2346889999999997 99999999999999999


Q ss_pred             EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccc
Q 002887          632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF  711 (870)
Q Consensus       632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~  711 (870)
                      ++||||+++|+|.+++...  ..+++.++..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++.+
T Consensus        86 ~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~  160 (277)
T d1phka_          86 FLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQL  160 (277)
T ss_dssp             EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEc
Confidence            9999999999999999653  4799999999999999999999998   9999999999999999999999999999876


Q ss_pred             cCCCCccccccccCCCCccCcccccc------CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc
Q 002887          712 PVEGGTHVSTTVVGTPGYLDPEYYIS------NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI  785 (870)
Q Consensus       712 ~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~  785 (870)
                      ...   .......||+.|+|||++.+      ..++.++||||+||++|||++|+.||.............     .+..
T Consensus       161 ~~~---~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~-----~~~~  232 (277)
T d1phka_         161 DPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM-----SGNY  232 (277)
T ss_dssp             CTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-----HTCC
T ss_pred             cCC---CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHH-----hCCC
Confidence            432   22345689999999999863      346889999999999999999999998765433322221     1111


Q ss_pred             chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          786 KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       786 ~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .      +........+.++.+++.+||+.+|++|||+.||++
T Consensus       233 ~------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         233 Q------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             C------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             C------CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1      111112234567889999999999999999999865


No 41 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-42  Score=381.43  Aligned_cols=244  Identities=23%  Similarity=0.326  Sum_probs=195.1

Q ss_pred             ccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHh-ccccceeEEEEEec----CCeEEEEEEEcc
Q 002887          567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRA-HHKNLTILVGYCDE----GANMGLIYEFMA  639 (870)
Q Consensus       567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l-~H~nIv~l~g~~~~----~~~~~LV~Ey~~  639 (870)
                      +.||+|+||.||+|+..  ++.||||+++..     +.+.+|++++.++ +|||||++++++.+    ....++|||||+
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~   92 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   92 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC
Confidence            57999999999999975  889999998653     4578899987665 89999999999864    456899999999


Q ss_pred             CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCC
Q 002887          640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~  716 (870)
                      +|+|.+++.+.....+++.++..|+.|++.||+|||+.   +|+||||||+|||+++   ++.+||+|||+++.....  
T Consensus        93 gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~--  167 (335)
T d2ozaa1          93 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--  167 (335)
T ss_dssp             SEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC--
T ss_pred             CCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeeccCC--
Confidence            99999999765556899999999999999999999998   9999999999999986   457999999999876432  


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD  796 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  796 (870)
                       .......||+.|+|||++.+..++.++|||||||++|||+||++||............. .....+..      .+...
T Consensus       168 -~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~-~~i~~~~~------~~~~~  239 (335)
T d2ozaa1         168 -NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK-TRIRMGQY------EFPNP  239 (335)
T ss_dssp             -CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------CCCSCSS------SCCTT
T ss_pred             -CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHH-HHHhcCCC------CCCCc
Confidence             22345689999999999999999999999999999999999999997654332221111 11111100      00001


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          797 FDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      ........+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         240 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            11234567899999999999999999999976


No 42 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.3e-42  Score=372.90  Aligned_cols=255  Identities=24%  Similarity=0.283  Sum_probs=197.7

Q ss_pred             ccccccCcEEEEEEEEC--CeeEEEEEeeccchh-----hhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEcc
Q 002887          567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQ-----GYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMA  639 (870)
Q Consensus       567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~-----~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~  639 (870)
                      ++||+|+||+||+|+..  ++.||||+++.....     ..+.+.+|++++++++|||||++++++..++..++||||+.
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            57999999999999975  889999998754322     23568899999999999999999999999999999999999


Q ss_pred             CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccc
Q 002887          640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHV  719 (870)
Q Consensus       640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~  719 (870)
                      ++++.....  ....+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++.....  ...
T Consensus        84 ~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~--~~~  156 (299)
T d1ua2a_          84 TDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRA  156 (299)
T ss_dssp             EEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC--CCC
T ss_pred             chHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCC--ccc
Confidence            988776553  345688999999999999999999998   9999999999999999999999999999865432  222


Q ss_pred             cccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccch---hcccc-
Q 002887          720 STTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIKN---IVDHR-  792 (870)
Q Consensus       720 ~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~~---i~d~~-  792 (870)
                      .....||+.|+|||++... .++.++|||||||++|||++|++||......+.+.......-...  ....   ..... 
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ua2a_         157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVT  236 (299)
T ss_dssp             CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhh
Confidence            3456799999999998755 579999999999999999999999987665555444433221110  0000   00000 


Q ss_pred             c--CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          793 L--QGDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       793 l--~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .  .....     ......+.+++.+||+.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            0  00011     122357889999999999999999999875


No 43 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=3.5e-42  Score=380.31  Aligned_cols=240  Identities=21%  Similarity=0.324  Sum_probs=202.0

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEc
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFM  638 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~  638 (870)
                      ++.+.||+|+||.||+|+..  ++.||||++....   ....+.+.+|+++|++++||||+++++++......++||||+
T Consensus        44 ~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~  123 (350)
T d1rdqe_          44 DRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV  123 (350)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccc
Confidence            34579999999999999985  8899999997543   233467899999999999999999999999999999999999


Q ss_pred             cCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcc
Q 002887          639 ANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTH  718 (870)
Q Consensus       639 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~  718 (870)
                      .+|+|..++.+.  ..+++..+..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||+|+.+..     
T Consensus       124 ~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~-----  193 (350)
T d1rdqe_         124 AGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----  193 (350)
T ss_dssp             TTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS-----
T ss_pred             cccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeeccc-----
Confidence            999999998654  4699999999999999999999998   999999999999999999999999999987632     


Q ss_pred             ccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCC
Q 002887          719 VSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFD  798 (870)
Q Consensus       719 ~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~  798 (870)
                      ......||+.|||||++.+..++.++|||||||++|||+||+.||..........+.    . .+..          ..+
T Consensus       194 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i----~-~~~~----------~~p  258 (350)
T d1rdqe_         194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI----V-SGKV----------RFP  258 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----H-HCCC----------CCC
T ss_pred             ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHH----h-cCCC----------CCC
Confidence            123567999999999999999999999999999999999999999865433322221    1 1111          112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 002887          799 TNTVWKAVEIALACIHTISTRRP-----TMNQVVI  828 (870)
Q Consensus       799 ~~~~~~l~~l~~~Cl~~dP~~RP-----sm~eVl~  828 (870)
                      ......+.+++.+||+.||++|+     |++|+++
T Consensus       259 ~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            23345688999999999999994     8899875


No 44 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-42  Score=376.72  Aligned_cols=244  Identities=25%  Similarity=0.370  Sum_probs=201.2

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccc---hhhhHHHHHHHHHHH-HhccccceeEEEEEecCCeEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS---VQGYKQFQAEVELLI-RAHHKNLTILVGYCDEGANMGLIYE  636 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~---~~~~~~f~~Ei~~l~-~l~H~nIv~l~g~~~~~~~~~LV~E  636 (870)
                      +.+.+.||+|+||+||+|+..  ++.||||+++...   ....+.+..|..++. .++||||+++++++.+++..++|||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmE   83 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   83 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEe
Confidence            346789999999999999985  8999999997642   233455677777765 6899999999999999999999999


Q ss_pred             EccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCC
Q 002887          637 FMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       637 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~  716 (870)
                      |+++|+|.+++...  ..+++.++..++.||+.||+|||++   +|+||||||+|||+++++++||+|||+++.....  
T Consensus        84 y~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~--  156 (320)
T d1xjda_          84 YLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG--  156 (320)
T ss_dssp             CCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT--
T ss_pred             ecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhcccc--
Confidence            99999999998643  4688999999999999999999999   9999999999999999999999999999865322  


Q ss_pred             ccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCC
Q 002887          717 THVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGD  796 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~  796 (870)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........     +..+.          ..
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~-----i~~~~----------~~  221 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHS-----IRMDN----------PF  221 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-----HHHCC----------CC
T ss_pred             cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHH-----HHcCC----------CC
Confidence            2233456899999999999999999999999999999999999999987654333222     11111          11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 002887          797 FDTNTVWKAVEIALACIHTISTRRPTMN-QVVI  828 (870)
Q Consensus       797 ~~~~~~~~l~~l~~~Cl~~dP~~RPsm~-eVl~  828 (870)
                      ++......+.+++.+||+.||++||++. |+++
T Consensus       222 ~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            2223345688999999999999999996 6753


No 45 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-42  Score=374.88  Aligned_cols=246  Identities=18%  Similarity=0.289  Sum_probs=202.3

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      .+.+.||+|+||+||+|...  ++.||||+++.... ....+.+|+++|++++||||+++++++.+....++|||||++|
T Consensus         8 ~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg   86 (321)
T d1tkia_           8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGL   86 (321)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCC
T ss_pred             EEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCC
Confidence            45689999999999999985  88999999976543 3456889999999999999999999999999999999999999


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCC--CcEEEEeccCCccccCCCCccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEK--FQAKLADFGLSRIFPVEGGTHV  719 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~--~~vkL~DFGla~~~~~~~~~~~  719 (870)
                      +|.+++.+. ...+++.++..++.||++||+|||+.   +|+||||||+|||++.+  ..+||+|||+++....   ...
T Consensus        87 ~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~---~~~  159 (321)
T d1tkia_          87 DIFERINTS-AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP---GDN  159 (321)
T ss_dssp             BHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT---TCE
T ss_pred             cHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcccc---CCc
Confidence            999988643 34689999999999999999999998   99999999999999854  5899999999986532   223


Q ss_pred             cccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccCCCCCH
Q 002887          720 STTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQGDFDT  799 (870)
Q Consensus       720 ~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~~~~~~  799 (870)
                      .....+|+.|+|||.+.+..++.++||||+||++|||++|+.||............    .. +...  ++....    .
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i----~~-~~~~--~~~~~~----~  228 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENI----MN-AEYT--FDEEAF----K  228 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----HH-TCCC--CCHHHH----T
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh-CCCC--CChhhc----c
Confidence            34567999999999999999999999999999999999999999876544333222    11 1100  000000    0


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          800 NTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       800 ~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .....+.+++.+|++.||++|||+.|+++
T Consensus       229 ~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         229 EISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            12346789999999999999999999987


No 46 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.5e-41  Score=377.33  Aligned_cols=244  Identities=25%  Similarity=0.346  Sum_probs=195.0

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccch---hhhHHHHHH---HHHHHHhccccceeEEEEEecCCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV---QGYKQFQAE---VELLIRAHHKNLTILVGYCDEGANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~---~~~~~f~~E---i~~l~~l~H~nIv~l~g~~~~~~~~~LV~  635 (870)
                      .+.+.||+|+||.||+|+..  ++.||||++.....   .....+.+|   +++++.++|||||++++++.+.+..++||
T Consensus         7 ~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivm   86 (364)
T d1omwa3           7 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL   86 (364)
T ss_dssp             EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEE
Confidence            45689999999999999985  88999999975422   222334444   55666678999999999999999999999


Q ss_pred             EEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCC
Q 002887          636 EFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEG  715 (870)
Q Consensus       636 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~  715 (870)
                      ||+++|+|.+++.+.  ..+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+|+.+... 
T Consensus        87 E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-  160 (364)
T d1omwa3          87 DLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-  160 (364)
T ss_dssp             CCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSSS-
T ss_pred             EecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCCC-
Confidence            999999999998643  4688999999999999999999998   9999999999999999999999999999876432 


Q ss_pred             CccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcccccC
Q 002887          716 GTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDHRLQ  794 (870)
Q Consensus       716 ~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~~l~  794 (870)
                         ......||+.|+|||++.. ..++.++|||||||++|||+||+.||......... ....... ..          .
T Consensus       161 ---~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~~~~~~-~~----------~  225 (364)
T d1omwa3         161 ---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTL-TM----------A  225 (364)
T ss_dssp             ---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH-HHHHHSS-SC----------C
T ss_pred             ---cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcc-cC----------C
Confidence               2345679999999999975 56899999999999999999999999865433221 1111111 00          0


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887          795 GDFDTNTVWKAVEIALACIHTISTRRPT-----MNQVVI  828 (870)
Q Consensus       795 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~  828 (870)
                      ...+......+.+++.+||+.||++|||     ++|+++
T Consensus       226 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         226 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            1112234457889999999999999999     577764


No 47 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-41  Score=365.66  Aligned_cols=258  Identities=21%  Similarity=0.295  Sum_probs=200.1

Q ss_pred             ccccccccCcEEEEEEEEC--CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      ..+.||+|+||+||+|+..  ++.||||+++....  ...+++.+|++++++++||||+++++++.++.+.++||||+.+
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~   85 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ   85 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCC
Confidence            3478999999999999985  88999999965432  2357889999999999999999999999999999999999986


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS  720 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~  720 (870)
                      + +.+.+.......+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        86 ~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--~~~~  159 (298)
T d1gz8a_          86 D-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTY  159 (298)
T ss_dssp             E-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--SBCT
T ss_pred             c-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCC--cccc
Confidence            5 44555555556799999999999999999999998   9999999999999999999999999999876322  2334


Q ss_pred             ccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc--chhc-ccccCCC
Q 002887          721 TTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI--KNIV-DHRLQGD  796 (870)
Q Consensus       721 ~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~--~~i~-d~~l~~~  796 (870)
                      ....||+.|+|||.+.... ++.++||||+||++|||++|+.||........+.+...........  .... .+.....
T Consensus       160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T d1gz8a_         160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS  239 (298)
T ss_dssp             TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence            4568999999999987665 5789999999999999999999998766544444333222111100  0000 0000000


Q ss_pred             ------CC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          797 ------FD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       797 ------~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                            ..     ......+.+++.+|++.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                  00     122356789999999999999999999975


No 48 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-41  Score=361.65  Aligned_cols=236  Identities=25%  Similarity=0.388  Sum_probs=193.1

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccch------hhhHHHHHHHHHHHHhc--cccceeEEEEEecCCeEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSV------QGYKQFQAEVELLIRAH--HKNLTILVGYCDEGANMG  632 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~------~~~~~f~~Ei~~l~~l~--H~nIv~l~g~~~~~~~~~  632 (870)
                      +.+.+.||+|+||.||+|+..  ++.||||++.....      ....++.+|+.++++++  ||||+++++++.+.+..+
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~   85 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFV   85 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEE
Confidence            345689999999999999985  88999999975432      12345789999999996  899999999999999999


Q ss_pred             EEEEEccC-CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-CCcEEEEeccCCcc
Q 002887          633 LIYEFMAN-GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-KFQAKLADFGLSRI  710 (870)
Q Consensus       633 LV~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-~~~vkL~DFGla~~  710 (870)
                      +||||+.+ +++.+++..  ...+++.++..++.|+++||+|||++   +|+||||||+|||++. ++.+||+|||+++.
T Consensus        86 lv~e~~~~~~~l~~~~~~--~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          86 LILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEeccCcchHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcccccee
Confidence            99999986 567777653  35799999999999999999999998   9999999999999985 47999999999986


Q ss_pred             ccCCCCccccccccCCCCccCccccccCCC-CccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhc
Q 002887          711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRL-TEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIV  789 (870)
Q Consensus       711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~  789 (870)
                      ...    .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....      +    .. .+..    
T Consensus       161 ~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~------~----i~-~~~~----  221 (273)
T d1xwsa_         161 LKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------E----II-RGQV----  221 (273)
T ss_dssp             CCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------H----HH-HCCC----
T ss_pred             ccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch------H----Hh-hccc----
Confidence            532    22345689999999999987765 577999999999999999999997421      1    11 1110    


Q ss_pred             ccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          790 DHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       790 d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                            .++...+..+.+++.+|++.||++|||++|+++
T Consensus       222 ------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         222 ------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             ------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                  111223456889999999999999999999976


No 49 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=8.7e-41  Score=359.36  Aligned_cols=257  Identities=19%  Similarity=0.286  Sum_probs=198.5

Q ss_pred             ccccccccCcEEEEEEEEC-CeeEEEEEeeccch--hhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccCC
Q 002887          565 FERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSV--QGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMANG  641 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~g  641 (870)
                      ..+.||+|+||+||+|+.. ++.||||++.....  ...+.+.+|+.+|++++||||+++++++...+..++++||+.++
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~   85 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD   85 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEE
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhh
Confidence            3478999999999999987 88999999976532  23568999999999999999999999999999999999999987


Q ss_pred             chhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCccccc
Q 002887          642 NLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVST  721 (870)
Q Consensus       642 sL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~~  721 (870)
                      .+.....  ....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+|++|||++......  .....
T Consensus        86 ~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~~  158 (286)
T d1ob3a_          86 LKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VRKYT  158 (286)
T ss_dssp             HHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--------
T ss_pred             hHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccC--ccccc
Confidence            7766653  346799999999999999999999998   9999999999999999999999999999876322  22234


Q ss_pred             cccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Cc---chhc--cccc
Q 002887          722 TVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DI---KNIV--DHRL  793 (870)
Q Consensus       722 ~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~---~~i~--d~~l  793 (870)
                      ...|++.|+|||.+.+. .++.++||||+||+++||++|+.||......+.+.+.....-...  ..   ....  +...
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence            45689999999999764 578999999999999999999999987665444444332211110  00   0000  0000


Q ss_pred             C-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          794 Q-------GDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       794 ~-------~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .       ..........+.+++.+||+.||++|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0       0011123457889999999999999999999974


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-40  Score=360.19  Aligned_cols=258  Identities=22%  Similarity=0.319  Sum_probs=198.1

Q ss_pred             hccccccccCcEEEEEEEEC---CeeEEEEEeeccch--hhhHHHHHHHHHHHHh---ccccceeEEEEEec-----CCe
Q 002887          564 NFERVLGKGGFGTVYHGYLD---DKQVAVKMLSSSSV--QGYKQFQAEVELLIRA---HHKNLTILVGYCDE-----GAN  630 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~---~~~vAVK~l~~~~~--~~~~~f~~Ei~~l~~l---~H~nIv~l~g~~~~-----~~~  630 (870)
                      ++.+.||+|+||+||+|+..   ++.||||+++....  .....+.+|+.+++.+   +||||++++++|..     ...
T Consensus        10 ~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~   89 (305)
T d1blxa_          10 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETK   89 (305)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEE
T ss_pred             EEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCce
Confidence            34578999999999999973   56799999876432  2344567888887776   79999999999843     346


Q ss_pred             EEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887          631 MGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRI  710 (870)
Q Consensus       631 ~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~  710 (870)
                      .+++|||+.++.+.... ......+++..+..++.|++.||+|||++   +|+||||||+|||+++++.+||+|||+++.
T Consensus        90 ~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          90 LTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             EEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             EEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence            88999999988765443 33456789999999999999999999998   999999999999999999999999999875


Q ss_pred             ccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCc-----
Q 002887          711 FPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDI-----  785 (870)
Q Consensus       711 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~-----  785 (870)
                      ..   .........||+.|+|||++.+..++.++||||+||++|||++|++||........+.............     
T Consensus       166 ~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  242 (305)
T d1blxa_         166 YS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  242 (305)
T ss_dssp             CC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             hc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccc
Confidence            42   2233456789999999999999999999999999999999999999998776555444433322111100     


Q ss_pred             ---c-hhccccc---CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          786 ---K-NIVDHRL---QGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       786 ---~-~i~d~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                         . .......   ...........+.+|+.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         243 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence               0 0000000   00111223456789999999999999999999875


No 51 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-39  Score=360.18  Aligned_cols=255  Identities=22%  Similarity=0.288  Sum_probs=194.0

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEec------CCeEEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCDE------GANMGLIY  635 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~LV~  635 (870)
                      ...++||+|+||+||+|+..  ++.||||++....    ..+.+|+++|++++|+||+++++++..      ....++||
T Consensus        23 ~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          23 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             EeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc----hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence            34578999999999999985  8899999997653    233579999999999999999999843      23478999


Q ss_pred             EEccCCchhhhhhh-cccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC-cEEEEeccCCccccC
Q 002887          636 EFMANGNLQAHLLE-DKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF-QAKLADFGLSRIFPV  713 (870)
Q Consensus       636 Ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~vkL~DFGla~~~~~  713 (870)
                      ||++++.+...... .....+++.++..++.||++||+|||++   +|+||||||+|||++.++ .+||+|||+++....
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence            99987654443322 2345799999999999999999999998   999999999999999775 899999999987633


Q ss_pred             CCCccccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc----------
Q 002887          714 EGGTHVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR----------  782 (870)
Q Consensus       714 ~~~~~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~----------  782 (870)
                      .   .......|++.|+|||.+.+ ..++.++||||+||++|||++|++||........+.++++..-..          
T Consensus       176 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~  252 (350)
T d1q5ka_         176 G---EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP  252 (350)
T ss_dssp             T---SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_pred             C---cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhcc
Confidence            2   22345679999999999875 468999999999999999999999998766544444433211000          


Q ss_pred             ----CCcchhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          783 ----GDIKNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       783 ----~~~~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                          ..........+...........+.+|+.+||+.||++|||+.|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             ---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                0000000000000111233456889999999999999999999986


No 52 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=5.5e-39  Score=347.45  Aligned_cols=259  Identities=18%  Similarity=0.205  Sum_probs=195.9

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeE-EEEEecCCeEEEEEEEcc
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTIL-VGYCDEGANMGLIYEFMA  639 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l-~g~~~~~~~~~LV~Ey~~  639 (870)
                      +.+.+.||+|+||.||+|+..  ++.||||++....  ..+++..|++++++++|+|++.. .++..+....++||||+.
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            345689999999999999975  8899999987653  23568899999999987775554 555577788899999985


Q ss_pred             CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC---CCcEEEEeccCCccccCCCC
Q 002887          640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE---KFQAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~---~~~vkL~DFGla~~~~~~~~  716 (870)
                      + ++...+.. ....+++..+..++.|++.||+|||++   +|+||||||+|||++.   +..+||+|||+|+.+.....
T Consensus        87 ~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          87 P-SLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             C-BHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             C-chhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            4 55555433 345799999999999999999999998   9999999999999864   55799999999997743322


Q ss_pred             c-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhccc
Q 002887          717 T-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVDH  791 (870)
Q Consensus       717 ~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d~  791 (870)
                      .     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...................  . ....+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~-~~~~~  238 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK--M-STPIE  238 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH--H-HSCHH
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhccc--C-CCChh
Confidence            1     12345679999999999999999999999999999999999999998755433222111110000  0 00001


Q ss_pred             ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          792 RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       792 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                      .+.    ...+.++.+++..|++.+|++||++.++.+.|+.+..
T Consensus       239 ~~~----~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         239 VLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHT----TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             Hhc----cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            111    1233568899999999999999999999999988653


No 53 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.4e-39  Score=349.49  Aligned_cols=260  Identities=20%  Similarity=0.260  Sum_probs=194.0

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec--------CCeE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE--------GANM  631 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~--------~~~~  631 (870)
                      .+.+.||+|+||+||+|+..  ++.||||++....  ....+++.+|+++|++++|+|++++++.+..        ....
T Consensus        13 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~   92 (318)
T d3blha1          13 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSI   92 (318)
T ss_dssp             EEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CE
T ss_pred             EEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceE
Confidence            34578999999999999985  8899999986542  2345678999999999999999999999855        3458


Q ss_pred             EEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccc
Q 002887          632 GLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIF  711 (870)
Q Consensus       632 ~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~  711 (870)
                      ++||||++++.+.....  ....++...+..++.|+++||.|||++   +|+||||||+|||++.++.+||+|||+++.+
T Consensus        93 ~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1          93 YLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF  167 (318)
T ss_dssp             EEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeeec
Confidence            89999999887765443  345788899999999999999999998   9999999999999999999999999999876


Q ss_pred             cCCCCc--cccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcC--Ccc
Q 002887          712 PVEGGT--HVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARG--DIK  786 (870)
Q Consensus       712 ~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~--~~~  786 (870)
                      ......  .......||+.|+|||++.+. .++.++||||+||++|||++|+.||........+...........  ...
T Consensus       168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  247 (318)
T d3blha1         168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  247 (318)
T ss_dssp             CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhcc
Confidence            432211  222345799999999999865 689999999999999999999999987665444333322221110  000


Q ss_pred             hhccccc--------CCCCCHH-------HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          787 NIVDHRL--------QGDFDTN-------TVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       787 ~i~d~~l--------~~~~~~~-------~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                      .......        .......       ....+++|+.+||+.||++|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         248 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             TCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            0000000        0001111       1235678999999999999999999874


No 54 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-39  Score=352.19  Aligned_cols=249  Identities=22%  Similarity=0.314  Sum_probs=203.0

Q ss_pred             hhccccccccCcEEEEEEEE-----CCeeEEEEEeeccc----hhhhHHHHHHHHHHHHhcc-ccceeEEEEEecCCeEE
Q 002887          563 NNFERVLGKGGFGTVYHGYL-----DDKQVAVKMLSSSS----VQGYKQFQAEVELLIRAHH-KNLTILVGYCDEGANMG  632 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~-----~~~~vAVK~l~~~~----~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~~~~~  632 (870)
                      +++.+.||+|+||+||+|+.     +++.||||+++...    ....+.+.+|++++++++| |||+++++++.+....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            45678999999999999986     26889999986542    2345678899999999977 79999999999999999


Q ss_pred             EEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCcccc
Q 002887          633 LIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFP  712 (870)
Q Consensus       633 LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~  712 (870)
                      ++|||+.+|+|.+++...  ..+.......++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+.
T Consensus       106 ~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence            999999999999998654  3567888899999999999999998   99999999999999999999999999998663


Q ss_pred             CCCCccccccccCCCCccCccccccC--CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcchhcc
Q 002887          713 VEGGTHVSTTVVGTPGYLDPEYYISN--RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIKNIVD  790 (870)
Q Consensus       713 ~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~~i~d  790 (870)
                      .. .........|++.|+|||.+.+.  .++.++|||||||+||||++|+.||..........+.........       
T Consensus       181 ~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~-------  252 (322)
T d1vzoa_         181 AD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE-------  252 (322)
T ss_dssp             GG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC-------
T ss_pred             cc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCC-------
Confidence            22 22233456799999999999764  478899999999999999999999987766555544443333211       


Q ss_pred             cccCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 002887          791 HRLQGDFDTNTVWKAVEIALACIHTISTRRPT-----MNQVVI  828 (870)
Q Consensus       791 ~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs-----m~eVl~  828 (870)
                          ...+.....++.+++.+|++.+|++|||     ++|+++
T Consensus       253 ----~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         253 ----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                1122345567889999999999999994     788865


No 55 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=7.3e-39  Score=345.41  Aligned_cols=257  Identities=16%  Similarity=0.209  Sum_probs=204.8

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhcc-ccceeEEEEEecCCeEEEEEEEcc
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHH-KNLTILVGYCDEGANMGLIYEFMA  639 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H-~nIv~l~g~~~~~~~~~LV~Ey~~  639 (870)
                      +.+.+.||+|+||.||+|+..  ++.||||++....  ....+.+|++.++.++| +|++.+++++.++...++||||+ 
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-   83 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-   83 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-
Confidence            345689999999999999975  8899999986543  33567899999999965 89999999999999999999998 


Q ss_pred             CCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcC-----CCcEEEEeccCCccccCC
Q 002887          640 NGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNE-----KFQAKLADFGLSRIFPVE  714 (870)
Q Consensus       640 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~-----~~~vkL~DFGla~~~~~~  714 (870)
                      +++|.+++.. ....+++.++..++.|++.||+|||++   +|+||||||+|||++.     ++.+||+|||+++.+...
T Consensus        84 ~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          84 GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence            6799887754 345799999999999999999999998   9999999999999974     578999999999976433


Q ss_pred             CCc-----cccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHH--HHHhhcCCcch
Q 002887          715 GGT-----HVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWV--SSMLARGDIKN  787 (870)
Q Consensus       715 ~~~-----~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~--~~~~~~~~~~~  787 (870)
                      ...     .......||+.|||||++.+..++.++|||||||++|||++|+.||...........+.  .......... 
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-  238 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLR-  238 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH-
T ss_pred             ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChH-
Confidence            221     12335679999999999999999999999999999999999999998665433322211  1111111111 


Q ss_pred             hcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHHhhh
Q 002887          788 IVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIELNDCLA  835 (870)
Q Consensus       788 i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~L~~~~~  835 (870)
                          .+..    ..+.++.+++..|+..+|++||+++.+.+.|++++.
T Consensus       239 ----~l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         239 ----ELCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             ----HHTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ----HhcC----CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence                1111    123568889999999999999999999999988753


No 56 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.9e-39  Score=354.55  Aligned_cols=257  Identities=24%  Similarity=0.309  Sum_probs=192.9

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeecc--chhhhHHHHHHHHHHHHhccccceeEEEEEecCC------eEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSS--SVQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA------NMGL  633 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~--~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~------~~~L  633 (870)
                      ...+.||+|+||+||+|...  ++.||||+++..  .....+.+.+|+++|++++|||||+++++|...+      +.++
T Consensus        21 ~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  100 (346)
T d1cm8a_          21 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL  100 (346)
T ss_dssp             EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEE
Confidence            34578999999999999975  889999999754  2334567899999999999999999999997654      5799


Q ss_pred             EEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccC
Q 002887          634 IYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPV  713 (870)
Q Consensus       634 V~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~  713 (870)
                      ||||+ +.+|.....   ...+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+|++|||+++....
T Consensus       101 v~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_         101 VMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             EEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCC
Confidence            99999 456666553   34699999999999999999999998   999999999999999999999999999986532


Q ss_pred             CCCccccccccCCCCccCccccccC-CCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhc-------CCc
Q 002887          714 EGGTHVSTTVVGTPGYLDPEYYISN-RLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLAR-------GDI  785 (870)
Q Consensus       714 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~-------~~~  785 (870)
                           ..+...||+.|+|||++.+. .++.++||||+||+++||++|++||........+..........       ...
T Consensus       174 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T d1cm8a_         174 -----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQS  248 (346)
T ss_dssp             -----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSC
T ss_pred             -----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcc
Confidence                 23456799999999998764 57899999999999999999999998766544443332211100       000


Q ss_pred             ----------chhcccccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHh
Q 002887          786 ----------KNIVDHRLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVIE--LNDC  833 (870)
Q Consensus       786 ----------~~i~d~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~--L~~~  833 (870)
                                .+.....+. .........+.+|+.+||+.||++|||+.|+++.  ++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         249 DEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence                      000000000 0111223567899999999999999999999874  5443


No 57 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-39  Score=356.56  Aligned_cols=258  Identities=21%  Similarity=0.318  Sum_probs=193.9

Q ss_pred             ccccccccCcEEEEEEEEC--CeeEEEEEeeccc-hhhhHHHHHHHHHHHHhccccceeEEEEEecCC----eEEEEEEE
Q 002887          565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGA----NMGLIYEF  637 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~----~~~LV~Ey  637 (870)
                      ..+.||+|+||+||+|+..  ++.||||++.... ....+++++|+++|++++||||+++++++....    ..+++++|
T Consensus        12 ~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~   91 (345)
T d1pmea_          12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH   91 (345)
T ss_dssp             EEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred             EEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEe
Confidence            4579999999999999975  8899999997543 334567899999999999999999999996543    34566677


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCc
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGT  717 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~  717 (870)
                      +.+|+|.+++..   ..+++..+..++.|+++||+|||++   +|+||||||+|||+++++.+||+|||+++........
T Consensus        92 ~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~  165 (345)
T d1pmea_          92 LMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH  165 (345)
T ss_dssp             CCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred             ecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcc
Confidence            889999999853   4699999999999999999999998   9999999999999999999999999999865332221


Q ss_pred             -cccccccCCCCccCcccccc-CCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCCcc---------
Q 002887          718 -HVSTTVVGTPGYLDPEYYIS-NRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGDIK---------  786 (870)
Q Consensus       718 -~~~~~~~gt~~y~APE~~~~-~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~~~---------  786 (870)
                       .......||+.|+|||++.. ..++.++||||+||+++||++|+.||................. .....         
T Consensus       166 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  244 (345)
T d1pmea_         166 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG-SPSQEDLNCIINLK  244 (345)
T ss_dssp             CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-SCCHHHHHTCCCHH
T ss_pred             ceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhcc-CCChhhhhhhhhhh
Confidence             22345679999999999854 5678999999999999999999999987654333222211111 00000         


Q ss_pred             --hhcccccC-CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887          787 --NIVDHRLQ-GDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVIE  829 (870)
Q Consensus       787 --~i~d~~l~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~  829 (870)
                        ........ ...+     .....++.+++.+|++.||++|||+.|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              00000000 0001     0122468899999999999999999999864


No 58 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=4.3e-38  Score=344.97  Aligned_cols=252  Identities=19%  Similarity=0.288  Sum_probs=194.1

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEec--CCeEEEEEEE
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDE--GANMGLIYEF  637 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~--~~~~~LV~Ey  637 (870)
                      +.+.+.||+|+||+||+|+..  ++.||||+++...   .+++.+|+++|++++ ||||+++++++..  ....++||||
T Consensus        37 y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~  113 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH  113 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEEC
T ss_pred             eEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEee
Confidence            345689999999999999985  8999999997543   467889999999995 9999999999874  4568999999


Q ss_pred             ccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCC-cEEEEeccCCccccCCCC
Q 002887          638 MANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKF-QAKLADFGLSRIFPVEGG  716 (870)
Q Consensus       638 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~-~vkL~DFGla~~~~~~~~  716 (870)
                      +.+++|....     +.+++..+..++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||+++.....  
T Consensus       114 ~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~--  183 (328)
T d3bqca1         114 VNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG--  183 (328)
T ss_dssp             CCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT--
T ss_pred             cCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCC--
Confidence            9999997764     3689999999999999999999999   999999999999998655 6999999999876432  


Q ss_pred             ccccccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHh---------hcCCc-
Q 002887          717 THVSTTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSML---------ARGDI-  785 (870)
Q Consensus       717 ~~~~~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~---------~~~~~-  785 (870)
                       .......+|+.|+|||.+.+.. ++.++||||+||+++||++|+.||............+...+         ..... 
T Consensus       184 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         184 -QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             -CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             -CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence             2234567899999999988654 79999999999999999999999976553221111111100         00000 


Q ss_pred             -----chhccc--------ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          786 -----KNIVDH--------RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       786 -----~~i~d~--------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                           ......        .............+.+|+.+||+.||++|||++|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 000000        0011111223456889999999999999999999975


No 59 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-38  Score=340.61  Aligned_cols=257  Identities=19%  Similarity=0.222  Sum_probs=199.9

Q ss_pred             ccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEecCCeEEEEEEEccC
Q 002887          565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDEGANMGLIYEFMAN  640 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~~~~~~LV~Ey~~~  640 (870)
                      ..+.||+|+||+||+|+..  ++.||||+++...  ....+++++|+.++++++||||+++++++.+....++|+|++.+
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~   85 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccc
Confidence            4578999999999999985  7889999997553  23457889999999999999999999999999999999999999


Q ss_pred             CchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCCCCcccc
Q 002887          641 GNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVEGGTHVS  720 (870)
Q Consensus       641 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~~~~~~~  720 (870)
                      +++..++.  ..+.+++..+..++.|+++||+|||++   +|+||||||+|||++.++.+||+|||.++......  ...
T Consensus        86 ~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~--~~~  158 (292)
T d1unla_          86 DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RCY  158 (292)
T ss_dssp             EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC--SCC
T ss_pred             cccccccc--cccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCC--ccc
Confidence            99887765  345788999999999999999999998   99999999999999999999999999998764322  223


Q ss_pred             ccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC---c---chhcccc-
Q 002887          721 TTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD---I---KNIVDHR-  792 (870)
Q Consensus       721 ~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~---~---~~i~d~~-  792 (870)
                      ....+++.|+|||.+.... ++.++||||+||+++||++|+.||..........+-+........   .   ....+.. 
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence            3456788999999988665 689999999999999999999997654432222221221111110   0   0000000 


Q ss_pred             --------cCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          793 --------LQGDFDTNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       793 --------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                              -...........+.+++.+|++.||++|||++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    000111223456789999999999999999999875


No 60 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-37  Score=343.24  Aligned_cols=254  Identities=22%  Similarity=0.270  Sum_probs=188.7

Q ss_pred             ccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec------CCeEEEE
Q 002887          565 FERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE------GANMGLI  634 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~------~~~~~LV  634 (870)
                      ..++||+|+||+||+|+..  ++.||||++....  ....+++.+|+.++++++||||+++++++..      ....++|
T Consensus        21 i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv  100 (355)
T d2b1pa1          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV  100 (355)
T ss_dssp             EEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred             EEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEE
Confidence            3479999999999999986  8999999997643  3344678999999999999999999999953      4688999


Q ss_pred             EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887          635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE  714 (870)
Q Consensus       635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~  714 (870)
                      |||+.++.+.. +.    ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+|++|||+++.... 
T Consensus       101 ~Ey~~~~l~~~-~~----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~-  171 (355)
T d2b1pa1         101 MELMDANLCQV-IQ----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-  171 (355)
T ss_dssp             EECCSEEHHHH-HT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EeccchHHHHh-hh----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhcccc-
Confidence            99998765543 32    4588999999999999999999999   999999999999999999999999999876532 


Q ss_pred             CCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHh--------------
Q 002887          715 GGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSML--------------  780 (870)
Q Consensus       715 ~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~--------------  780 (870)
                        ........||+.|+|||++.+..++.++||||+||+++||++|+.||..........+......              
T Consensus       172 --~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (355)
T d2b1pa1         172 --SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_dssp             -----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH
T ss_pred             --ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH
Confidence              2333456799999999999999999999999999999999999999986654333332221111              


Q ss_pred             ----hcC-C-----cchhcccccCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 002887          781 ----ARG-D-----IKNIVDHRLQGDF---DTNTVWKAVEIALACIHTISTRRPTMNQVVIE  829 (870)
Q Consensus       781 ----~~~-~-----~~~i~d~~l~~~~---~~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~~  829 (870)
                          ... .     ....+........   .......+.+|+.+|++.||++|||++|+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                000 0     0111111111111   12346678999999999999999999999853


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-37  Score=339.31  Aligned_cols=254  Identities=24%  Similarity=0.310  Sum_probs=193.2

Q ss_pred             hccccccccCcEEEEEEEEC--CeeEEEEEeeccc--hhhhHHHHHHHHHHHHhccccceeEEEEEec-----CCeEEEE
Q 002887          564 NFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS--VQGYKQFQAEVELLIRAHHKNLTILVGYCDE-----GANMGLI  634 (870)
Q Consensus       564 ~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~--~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~~-----~~~~~LV  634 (870)
                      ...+.||+|+||+||+|+..  ++.||||++....  ....+++.+|+++|++++|||++++++++..     ....+++
T Consensus        21 ~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i  100 (348)
T d2gfsa1          21 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL  100 (348)
T ss_dssp             EEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred             EEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEE
Confidence            34578999999999999975  8999999997543  3345678899999999999999999999853     3345777


Q ss_pred             EEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEeccCCccccCC
Q 002887          635 YEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADFGLSRIFPVE  714 (870)
Q Consensus       635 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DFGla~~~~~~  714 (870)
                      ++|+.+|+|.+++..   +.+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+|++|||++....  
T Consensus       101 ~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~--  172 (348)
T d2gfsa1         101 VTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTD--  172 (348)
T ss_dssp             EEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCT--
T ss_pred             EEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccC--
Confidence            888999999998843   4699999999999999999999998   99999999999999999999999999987542  


Q ss_pred             CCccccccccCCCCccCccccccCC-CCccchHHHHHHHHHHHHhCCCCCCCCCccchHHHHHHHHhhcCC------c--
Q 002887          715 GGTHVSTTVVGTPGYLDPEYYISNR-LTEKSDVYSFGVVLLELITGQPVIQKTPQRTLIGQWVSSMLARGD------I--  785 (870)
Q Consensus       715 ~~~~~~~~~~gt~~y~APE~~~~~~-~~~ksDVwS~GvvL~elltG~~p~~~~~~~~~l~~~~~~~~~~~~------~--  785 (870)
                         .......|++.|+|||...+.. ++.++||||+||++|||++|++||.....................      .  
T Consensus       173 ---~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  249 (348)
T d2gfsa1         173 ---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  249 (348)
T ss_dssp             ---GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCH
T ss_pred             ---cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccch
Confidence               2334567889999999877654 689999999999999999999999876644433333222111000      0  


Q ss_pred             --chhcccccC-CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 002887          786 --KNIVDHRLQ-GDFD-----TNTVWKAVEIALACIHTISTRRPTMNQVVI  828 (870)
Q Consensus       786 --~~i~d~~l~-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPsm~eVl~  828 (870)
                        ......... ....     ......+.+|+.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence              000000000 0000     112356789999999999999999999986


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1.5e-33  Score=312.59  Aligned_cols=263  Identities=22%  Similarity=0.303  Sum_probs=191.3

Q ss_pred             hhccccccccCcEEEEEEEEC--CeeEEEEEeeccchhhhHHHHHHHHHHHHhc-----------cccceeEEEEEec--
Q 002887          563 NNFERVLGKGGFGTVYHGYLD--DKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-----------HKNLTILVGYCDE--  627 (870)
Q Consensus       563 ~~f~~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-----------H~nIv~l~g~~~~--  627 (870)
                      +.+.+.||+|+||+||+|+..  ++.||||+++.... ..+.+++|++++++++           |+||+++++++..  
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~-~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecccc-chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            456789999999999999975  89999999986543 3457788999988875           5789999988754  


Q ss_pred             CCeEEEEEEEccCCch-hhhhhhcccccccHHHHHHHHHHHHHHHHHHHh-CCCCCceeCCCCCCCEEEcCCC------c
Q 002887          628 GANMGLIYEFMANGNL-QAHLLEDKADTLCWERRLQIASESAQGLEYLHN-GCKPPIVHRDVKSANILLNEKF------Q  699 (870)
Q Consensus       628 ~~~~~LV~Ey~~~gsL-~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~-~~~~~IvHrDLKp~NILld~~~------~  699 (870)
                      ....+++++++..+.. ...........+++..+..++.|++.||+|||+ .   +|+||||||+|||++.++      .
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccccce
Confidence            3566677777655443 333333445678899999999999999999998 5   899999999999998765      4


Q ss_pred             EEEEeccCCccccCCCCccccccccCCCCccCccccccCCCCccchHHHHHHHHHHHHhCCCCCCCCCcc------chHH
Q 002887          700 AKLADFGLSRIFPVEGGTHVSTTVVGTPGYLDPEYYISNRLTEKSDVYSFGVVLLELITGQPVIQKTPQR------TLIG  773 (870)
Q Consensus       700 vkL~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~ksDVwS~GvvL~elltG~~p~~~~~~~------~~l~  773 (870)
                      +|++|||.+.....     ......||+.|+|||++....++.++||||+||+++||++|+.||......      ..+.
T Consensus       171 ~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         171 IKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            99999999976532     224567999999999999999999999999999999999999999754321      1111


Q ss_pred             HHHHHH-------hhcCC-cchhccc-------------------ccCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 002887          774 QWVSSM-------LARGD-IKNIVDH-------------------RLQGDFDTNTVWKAVEIALACIHTISTRRPTMNQV  826 (870)
Q Consensus       774 ~~~~~~-------~~~~~-~~~i~d~-------------------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPsm~eV  826 (870)
                      +.+...       ...+. .....+.                   .............+.+++.+|++.||++|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            111110       00000 0000000                   00122345667789999999999999999999999


Q ss_pred             HHH--HHHhh
Q 002887          827 VIE--LNDCL  834 (870)
Q Consensus       827 l~~--L~~~~  834 (870)
                      ++.  +++..
T Consensus       326 L~Hp~f~~~~  335 (362)
T d1q8ya_         326 VNHPWLKDTL  335 (362)
T ss_dssp             HTCGGGTTCT
T ss_pred             hcCcccCCCC
Confidence            863  44433


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82  E-value=8.9e-21  Score=189.73  Aligned_cols=161  Identities=17%  Similarity=0.214  Sum_probs=118.2

Q ss_pred             ccccccccCcEEEEEEEEC-CeeEEEEEeeccch------------------hhhHHHHHHHHHHHHhccccceeEEEEE
Q 002887          565 FERVLGKGGFGTVYHGYLD-DKQVAVKMLSSSSV------------------QGYKQFQAEVELLIRAHHKNLTILVGYC  625 (870)
Q Consensus       565 f~~~LG~G~fG~Vy~~~~~-~~~vAVK~l~~~~~------------------~~~~~f~~Ei~~l~~l~H~nIv~l~g~~  625 (870)
                      +.+.||+|+||.||+|+.. |+.||||+++....                  .....+..|+..+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4689999999999999975 89999998753211                  1123356788899999999999888764


Q ss_pred             ecCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCCCEEEcCCCcEEEEec
Q 002887          626 DEGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDVKSANILLNEKFQAKLADF  705 (870)
Q Consensus       626 ~~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDLKp~NILld~~~~vkL~DF  705 (870)
                      .    .+++|||++++.+.+         ++......++.|+++||+|||+.   +|+||||||+|||++++ .++|+||
T Consensus        84 ~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          84 G----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             T----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCC
T ss_pred             C----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEEC
Confidence            3    379999999865543         23344567899999999999998   99999999999999975 5899999


Q ss_pred             cCCccccCCCCccccccccCCCCccC------ccccccCCCCccchHHHHHHHH
Q 002887          706 GLSRIFPVEGGTHVSTTVVGTPGYLD------PEYYISNRLTEKSDVYSFGVVL  753 (870)
Q Consensus       706 Gla~~~~~~~~~~~~~~~~gt~~y~A------PE~~~~~~~~~ksDVwS~GvvL  753 (870)
                      |+|.........          .|..      .| +..+++..++|+||..--+
T Consensus       147 G~a~~~~~~~~~----------~~l~rd~~~~~~-~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         147 PQSVEVGEEGWR----------EILERDVRNIIT-YFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TTCEETTSTTHH----------HHHHHHHHHHHH-HHHHHHCCCCCHHHHHHHH
T ss_pred             CCcccCCCCCcH----------HHHHHHHHHHHH-HHcCCCCCcccHHHHHHHH
Confidence            999764221110          0111      01 1245678889999975433


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.71  E-value=5.5e-18  Score=182.37  Aligned_cols=125  Identities=30%  Similarity=0.504  Sum_probs=109.4

Q ss_pred             cCChhhHHHHHHHHhhcC---CCCCCC--CCCCCCCCCCccceecCCCCCCCCcEEEEEcCCCCCcc--cCcccccccCc
Q 002887          362 LTNQQDVDAIMKIKSKYE---VKRDWQ--GDPCAPKVYMWQGINCSYDANQSPRIISINLSSSGIAG--DIVPYIFSLTS  434 (870)
Q Consensus       362 ~~~~~d~~al~~~k~~~~---~~~~w~--~~pC~~~~~~W~Gv~C~~~~~~~~~l~~l~L~~n~l~G--~ip~~~~~l~~  434 (870)
                      -|.++|.+||++||+.+.   .+.+|.  +|+|.   +.|.||+|+.+ +...||+.|+|++|+++|  .||++|++|++
T Consensus         2 ~c~~~e~~aLl~~k~~~~~~~~l~sW~~~~d~C~---~~w~gv~C~~~-~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~   77 (313)
T d1ogqa_           2 LCNPQDKQALLQIKKDLGNPTTLSSWLPTTDCCN---RTWLGVLCDTD-TQTYRVNNLDLSGLNLPKPYPIPSSLANLPY   77 (313)
T ss_dssp             CSCHHHHHHHHHHHHHTTCCGGGTTCCTTSCTTT---TCSTTEEECCS-SSCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred             CCCHHHHHHHHHHHHHCCCCCcCCCCCCCCCCCC---CcCCCeEEeCC-CCcEEEEEEECCCCCCCCCCCCChHHhcCcc
Confidence            388999999999999873   467884  35552   36999999853 344689999999999999  68999999999


Q ss_pred             cccccccc-CcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccccc
Q 002887          435 IESLDLSK-NSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSV  490 (870)
Q Consensus       435 L~~L~Ls~-N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~  490 (870)
                      |++|+|++ |+|+|.||.+|++|++|++|+|++|+|+|.+|..+..+.++..++++.
T Consensus        78 L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~  134 (313)
T d1ogqa_          78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY  134 (313)
T ss_dssp             CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCS
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccccccchhhhccccccc
Confidence            99999996 899999999999999999999999999999999999999888887764


No 65 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.04  E-value=1.1e-10  Score=115.32  Aligned_cols=98  Identities=15%  Similarity=0.168  Sum_probs=85.3

Q ss_pred             CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCccccCcCCCCeEEecC
Q 002887          394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSG  466 (870)
Q Consensus       394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~  466 (870)
                      |.|..|.|++.+      ..+..++.|+|++|.|++.++. .|.++++|+.|+|++|++++..|..+..+++|+.|+|++
T Consensus         8 C~~~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~   87 (192)
T d1w8aa_           8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE   87 (192)
T ss_dssp             EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             EcCCEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence            579999998643      3446789999999999987754 578999999999999999999999999999999999999


Q ss_pred             CcCCCCCCCcccccccCCccccccC
Q 002887          467 NNLQGSLPSGLSEKVKNGSLSLSVD  491 (870)
Q Consensus       467 N~l~g~ip~~l~~~~~~~~l~~~~~  491 (870)
                      |+|++..|..+..+++|+.|+++.+
T Consensus        88 N~l~~l~~~~F~~l~~L~~L~L~~N  112 (192)
T d1w8aa_          88 NKIKEISNKMFLGLHQLKTLNLYDN  112 (192)
T ss_dssp             CCCCEECSSSSTTCTTCCEEECCSS
T ss_pred             ccccccCHHHHhCCCcccccccCCc
Confidence            9999777788899999999988743


No 66 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.04  E-value=3.5e-11  Score=128.29  Aligned_cols=91  Identities=29%  Similarity=0.409  Sum_probs=80.2

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ...++.|++++|+++|.+| +++.+++|+.|+|++|+|+|.||+.|++|++|++|||++|+|+|.||+ ++++.++..++
T Consensus       220 ~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~  297 (313)
T d1ogqa_         220 DKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSA  297 (313)
T ss_dssp             TSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGG
T ss_pred             ccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHH
Confidence            4578899999999998865 799999999999999999999999999999999999999999999995 57777777655


Q ss_pred             cccCCCCCCCCC--Ccc
Q 002887          488 LSVDGNRNLCPS--ASC  502 (870)
Q Consensus       488 ~~~~~n~~lc~~--~sc  502 (870)
                      +  .||+.+|+.  ++|
T Consensus       298 l--~~N~~l~g~plp~c  312 (313)
T d1ogqa_         298 Y--ANNKCLCGSPLPAC  312 (313)
T ss_dssp             T--CSSSEEESTTSSCC
T ss_pred             h--CCCccccCCCCCCC
Confidence            5  489989976  455


No 67 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.98  E-value=4.4e-10  Score=107.09  Aligned_cols=107  Identities=24%  Similarity=0.321  Sum_probs=84.7

Q ss_pred             CCCCCCCCCccceecCCCC--------CCCCcEEEEEcCCCC-CcccCcccccccCcccccccccCcCCCCCCccccCcC
Q 002887          387 DPCAPKVYMWQGINCSYDA--------NQSPRIISINLSSSG-IAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQ  457 (870)
Q Consensus       387 ~pC~~~~~~W~Gv~C~~~~--------~~~~~l~~l~L~~n~-l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~  457 (870)
                      +.|.+  ..+.+|+|+..+        ....+++.|+|.+|+ |+..-+..|.+|++|+.|+|++|+|++.-|..|..++
T Consensus         3 ~~C~c--~~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~   80 (156)
T d2ifga3           3 DACCP--HGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTP   80 (156)
T ss_dssp             SSSCC--SSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCS
T ss_pred             CCCCc--CCCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccc
Confidence            34543  368899998633        233578999998775 7744445699999999999999999977788899999


Q ss_pred             CCCeEEecCCcCCCCCCCcccccccCCccccccCCCCCCCC
Q 002887          458 SLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVDGNRNLCP  498 (870)
Q Consensus       458 ~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~~n~~lc~  498 (870)
                      +|+.|+|++|+|+ .+|.......++..|+++  +|+..|.
T Consensus        81 ~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~--~Np~~C~  118 (156)
T d2ifga3          81 RLSRLNLSFNALE-SLSWKTVQGLSLQELVLS--GNPLHCS  118 (156)
T ss_dssp             CCCEEECCSSCCS-CCCSTTTCSCCCCEEECC--SSCCCCC
T ss_pred             cccceeccCCCCc-ccChhhhccccccccccC--CCcccCC
Confidence            9999999999999 788777666677766665  8888775


No 68 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.79  E-value=1.7e-09  Score=106.48  Aligned_cols=89  Identities=21%  Similarity=0.333  Sum_probs=80.7

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      .++++.|+|++|++.+..+..+..+++|++|+|++|+|++..|..|.+|++|+.|+|++|+|++..|..+..+++++.|+
T Consensus        53 l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~  132 (192)
T d1w8aa_          53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN  132 (192)
T ss_dssp             CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred             CceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccc
Confidence            46899999999999999999999999999999999999987788899999999999999999988888899999999887


Q ss_pred             cccCCCCCCCC
Q 002887          488 LSVDGNRNLCP  498 (870)
Q Consensus       488 ~~~~~n~~lc~  498 (870)
                      ++  +|+..|.
T Consensus       133 L~--~N~~~~~  141 (192)
T d1w8aa_         133 LA--SNPFNCN  141 (192)
T ss_dssp             CT--TCCBCCS
T ss_pred             cc--ccccccc
Confidence            76  7776664


No 69 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.66  E-value=9.2e-09  Score=93.70  Aligned_cols=78  Identities=28%  Similarity=0.304  Sum_probs=53.6

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCC-CCcccccccCCccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSL-PSGLSEKVKNGSLS  487 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~i-p~~l~~~~~~~~l~  487 (870)
                      ..++.|+|++|.|+ .+|+.++.+++|+.|+|++|.|+ .+|. ++++++|+.|++++|+++... +..+..++++..|+
T Consensus        20 ~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~~-~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L~   96 (124)
T d1dcea3          20 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN   96 (124)
T ss_dssp             TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred             CCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccCc-cccccccCeEECCCCccCCCCCchhhcCCCCCCEEE
Confidence            46777777777776 57777777777777777777777 3553 677777777777777776332 23566667776666


Q ss_pred             cc
Q 002887          488 LS  489 (870)
Q Consensus       488 ~~  489 (870)
                      ++
T Consensus        97 l~   98 (124)
T d1dcea3          97 LQ   98 (124)
T ss_dssp             CT
T ss_pred             CC
Confidence            54


No 70 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.64  E-value=1.4e-08  Score=92.40  Aligned_cols=74  Identities=28%  Similarity=0.405  Sum_probs=66.2

Q ss_pred             EEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887          413 SINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD  491 (870)
Q Consensus       413 ~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~  491 (870)
                      .|+|++|+|+ .++ .+.+|++|++|+|++|+|+ .+|+.++.+++|+.|+|++|+|+ .+| .+..+++++.|+++.+
T Consensus         2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N   75 (124)
T d1dcea3           2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN   75 (124)
T ss_dssp             EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred             EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence            6899999998 665 5999999999999999998 78999999999999999999999 455 5889999999888744


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.55  E-value=4e-08  Score=101.58  Aligned_cols=88  Identities=24%  Similarity=0.268  Sum_probs=79.6

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ..++..|++++|.+++..+..+..+++|+.|+|++|+|++..|..|..+++|+.|||++|+|+ .||+++..+.+++.|+
T Consensus       123 l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~  201 (266)
T d1p9ag_         123 LGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAF  201 (266)
T ss_dssp             CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEE
T ss_pred             ccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEE
Confidence            457899999999999666667888999999999999999888888999999999999999999 9999999999998877


Q ss_pred             cccCCCCCCCC
Q 002887          488 LSVDGNRNLCP  498 (870)
Q Consensus       488 ~~~~~n~~lc~  498 (870)
                      ++  ||+..|.
T Consensus       202 L~--~Np~~Cd  210 (266)
T d1p9ag_         202 LH--GNPWLCN  210 (266)
T ss_dssp             CC--SCCBCCS
T ss_pred             ec--CCCCCCC
Confidence            76  9998886


No 72 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50  E-value=5.5e-08  Score=100.54  Aligned_cols=94  Identities=22%  Similarity=0.236  Sum_probs=78.0

Q ss_pred             eecCCCC------CCCCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCC
Q 002887          399 INCSYDA------NQSPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGS  472 (870)
Q Consensus       399 v~C~~~~------~~~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~  472 (870)
                      |.|++.+      ..++.++.|+|++|.|++.-+..|.+|++|++|+|++|+|+ .||. ++.+++|+.|+|++|+|++ 
T Consensus        15 v~C~~~~L~~iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls~N~l~~-   91 (266)
T d1p9ag_          15 VNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQS-   91 (266)
T ss_dssp             EECTTSCCSSCCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTTCCEEECCSSCCSS-
T ss_pred             EEccCCCCCeeCcCcCcCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc-ccccccccccccccccccc-
Confidence            7897632      24457999999999999665677999999999999999998 5775 5889999999999999994 


Q ss_pred             CCCcccccccCCccccccCCCCC
Q 002887          473 LPSGLSEKVKNGSLSLSVDGNRN  495 (870)
Q Consensus       473 ip~~l~~~~~~~~l~~~~~~n~~  495 (870)
                      +|..+..+++++.|+++.+....
T Consensus        92 ~~~~~~~l~~L~~L~l~~~~~~~  114 (266)
T d1p9ag_          92 LPLLGQTLPALTVLDVSFNRLTS  114 (266)
T ss_dssp             CCCCTTTCTTCCEEECCSSCCCC
T ss_pred             cccccccccccccccccccccce
Confidence            57788899999999887654433


No 73 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.46  E-value=3.4e-08  Score=103.06  Aligned_cols=89  Identities=22%  Similarity=0.210  Sum_probs=77.5

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ..+++.|+|++|+|++..+..|.++++|+.|+|++|++++..|..|..+++|+.||+++|++++..|..+..+.+++.|+
T Consensus       152 ~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~  231 (284)
T d1ozna_         152 LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLR  231 (284)
T ss_dssp             CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEE
T ss_pred             ccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEE
Confidence            35788999999999977778889999999999999999998899999999999999999999988888888888888776


Q ss_pred             cccCCCCCCCC
Q 002887          488 LSVDGNRNLCP  498 (870)
Q Consensus       488 ~~~~~n~~lc~  498 (870)
                      ++  +|+..|.
T Consensus       232 l~--~N~l~C~  240 (284)
T d1ozna_         232 LN--DNPWVCD  240 (284)
T ss_dssp             CC--SSCEECS
T ss_pred             ec--CCCCCCC
Confidence            65  8887764


No 74 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.45  E-value=1.3e-07  Score=99.46  Aligned_cols=92  Identities=24%  Similarity=0.317  Sum_probs=75.0

Q ss_pred             CCccceecCCCC------CCCCcEEEEEcCCCCCcccCc-ccccccCcccccccccCcCCCCCCccccCcCCCCeEEecC
Q 002887          394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIV-PYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSG  466 (870)
Q Consensus       394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip-~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~  466 (870)
                      |.|.+|+|++.+      ..++.++.|+|++|+|+ .|| ..|.+|++|++|++++|.++...|..|.+|++|+.|+|++
T Consensus        10 c~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~   88 (305)
T d1xkua_          10 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK   88 (305)
T ss_dssp             EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred             ecCCEEEecCCCCCccCCCCCCCCCEEECcCCcCC-CcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence            689999998632      23467999999999999 555 4799999999999999999987788999999999999999


Q ss_pred             CcCCCCCCCcccccccCCccccc
Q 002887          467 NNLQGSLPSGLSEKVKNGSLSLS  489 (870)
Q Consensus       467 N~l~g~ip~~l~~~~~~~~l~~~  489 (870)
                      |+++ .+|....  ..+..|..+
T Consensus        89 n~l~-~l~~~~~--~~l~~L~~~  108 (305)
T d1xkua_          89 NQLK-ELPEKMP--KTLQELRVH  108 (305)
T ss_dssp             SCCS-BCCSSCC--TTCCEEECC
T ss_pred             CccC-cCccchh--hhhhhhhcc
Confidence            9999 6776543  234444443


No 75 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39  E-value=9.1e-08  Score=91.21  Aligned_cols=78  Identities=18%  Similarity=0.124  Sum_probs=61.8

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      .+++.|+|++|+|+ .||..+..+++|+.|||++|+|+ .++ .++.|++|+.|+|++|+++...+..+..++++..|++
T Consensus        18 ~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L   94 (162)
T d1a9na_          18 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL   94 (162)
T ss_dssp             TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred             CcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence            46888999999998 67776778899999999999988 565 4788899999999999998443334456788888777


Q ss_pred             c
Q 002887          489 S  489 (870)
Q Consensus       489 ~  489 (870)
                      +
T Consensus        95 ~   95 (162)
T d1a9na_          95 T   95 (162)
T ss_dssp             C
T ss_pred             c
Confidence            6


No 76 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.20  E-value=2.6e-07  Score=87.97  Aligned_cols=82  Identities=20%  Similarity=0.146  Sum_probs=66.9

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCC--CcccccccCCc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLP--SGLSEKVKNGS  485 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip--~~l~~~~~~~~  485 (870)
                      ...++.|+|++|.|+ .++ .|..|++|+.|+|++|+++..-|..+..+++|+.|+|++|+++ .++  ..+..+++|..
T Consensus        40 l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~-~~~~l~~l~~l~~L~~  116 (162)
T d1a9na_          40 LDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY  116 (162)
T ss_dssp             TTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred             cccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccceecccccc-ccccccccccccccch
Confidence            357999999999999 664 5899999999999999999544444578999999999999998 444  36777888887


Q ss_pred             cccccCCCC
Q 002887          486 LSLSVDGNR  494 (870)
Q Consensus       486 l~~~~~~n~  494 (870)
                      |+++  +|+
T Consensus       117 L~l~--~N~  123 (162)
T d1a9na_         117 LCIL--RNP  123 (162)
T ss_dssp             EECC--SSG
T ss_pred             hhcC--CCc
Confidence            7766  553


No 77 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.18  E-value=6.6e-06  Score=83.78  Aligned_cols=132  Identities=13%  Similarity=0.116  Sum_probs=95.5

Q ss_pred             cCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhc-cccceeEEEEEecCCeEEEEEEEccCCchhhhhhhc
Q 002887          572 GGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAH-HKNLTILVGYCDEGANMGLIYEFMANGNLQAHLLED  650 (870)
Q Consensus       572 G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~-H~nIv~l~g~~~~~~~~~LV~Ey~~~gsL~~~l~~~  650 (870)
                      ++.+.||+...+++.+.+|+...........+.+|...+..+. +--+.+++.++..++..++||+++++..+.+.....
T Consensus        25 ~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~~  104 (263)
T d1j7la_          25 MSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE  104 (263)
T ss_dssp             CSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTTC
T ss_pred             CCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccccccc
Confidence            3446899988888889999987765555667889999988874 333567888888888899999999998876543211


Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhC-----------------------------------------------------
Q 002887          651 KADTLCWERRLQIASESAQGLEYLHNG-----------------------------------------------------  677 (870)
Q Consensus       651 ~~~~l~~~~~~~i~~~ia~aL~yLH~~-----------------------------------------------------  677 (870)
                      .       ....++.++++.+..||+.                                                     
T Consensus       105 ~-------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  177 (263)
T d1j7la_         105 Q-------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTE  177 (263)
T ss_dssp             S-------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHS
T ss_pred             c-------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhc
Confidence            1       1223455555556666642                                                     


Q ss_pred             C---CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887          678 C---KPPIVHRDVKSANILLNEKFQAKLADFGLSRI  710 (870)
Q Consensus       678 ~---~~~IvHrDLKp~NILld~~~~vkL~DFGla~~  710 (870)
                      .   ...++|+|+.+.|||+++++..-|+||+.+..
T Consensus       178 ~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         178 KPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             CCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence            0   12378999999999999877778999998753


No 78 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.16  E-value=6.8e-07  Score=93.70  Aligned_cols=79  Identities=25%  Similarity=0.310  Sum_probs=38.1

Q ss_pred             cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887          410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS  489 (870)
Q Consensus       410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~  489 (870)
                      +++.|+|++|.+++.++..+.+++.+++|++++|.+++..|..+.++++|++|+|++|+|+ .||.++..+++|+.|+++
T Consensus       172 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls  250 (305)
T d1xkua_         172 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH  250 (305)
T ss_dssp             TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred             ccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECC
Confidence            4444445444444444444444444455555544444444444444444555555555444 344444444444444443


No 79 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.12  E-value=8.7e-07  Score=92.01  Aligned_cols=83  Identities=17%  Similarity=0.111  Sum_probs=75.8

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ...++.|++++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..+..++++..|+
T Consensus       128 ~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~  207 (284)
T d1ozna_         128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY  207 (284)
T ss_dssp             CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred             hcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccc
Confidence            45789999999999966667789999999999999999988888999999999999999999999999999999999988


Q ss_pred             ccc
Q 002887          488 LSV  490 (870)
Q Consensus       488 ~~~  490 (870)
                      ++.
T Consensus       208 l~~  210 (284)
T d1ozna_         208 LFA  210 (284)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            873


No 80 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.09  E-value=8.6e-07  Score=95.48  Aligned_cols=76  Identities=22%  Similarity=0.280  Sum_probs=66.3

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      .+.++.|+|++|+|++. + .+..+++|+.|+|++|+|++ +| .|++|++|+.|+|++|+|++.+|  +.++++|+.|+
T Consensus       306 ~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~  379 (384)
T d2omza2         306 LKNLTYLTLYFNNISDI-S-PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLG  379 (384)
T ss_dssp             CTTCSEEECCSSCCSCC-G-GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEE
T ss_pred             hcccCeEECCCCCCCCC-c-ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEee
Confidence            35788999999999975 3 38999999999999999995 56 58999999999999999997655  88899999988


Q ss_pred             cc
Q 002887          488 LS  489 (870)
Q Consensus       488 ~~  489 (870)
                      ++
T Consensus       380 L~  381 (384)
T d2omza2         380 LN  381 (384)
T ss_dssp             CC
T ss_pred             CC
Confidence            87


No 81 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.95  E-value=2.6e-06  Score=85.22  Aligned_cols=76  Identities=14%  Similarity=0.265  Sum_probs=64.4

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      .++++.|++++|.+.+..  .+++|++|+.|+|++|++++ +|. +++|++|+.|+|++|++++ +| .+.++++|..|+
T Consensus       150 ~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~-i~-~l~~l~~L~~L~  223 (227)
T d1h6ua2         150 LTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISD-VS-PLANTSNLFIVT  223 (227)
T ss_dssp             CTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCB-CG-GGTTCTTCCEEE
T ss_pred             ccccccccccccccccch--hhcccccceecccCCCccCC-Chh-hcCCCCCCEEECcCCcCCC-Cc-ccccCCCCCEEE
Confidence            357899999999998543  38999999999999999995 655 8999999999999999994 55 378888888887


Q ss_pred             cc
Q 002887          488 LS  489 (870)
Q Consensus       488 ~~  489 (870)
                      ++
T Consensus       224 ls  225 (227)
T d1h6ua2         224 LT  225 (227)
T ss_dssp             EE
T ss_pred             ee
Confidence            75


No 82 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.95  E-value=3e-06  Score=79.78  Aligned_cols=79  Identities=18%  Similarity=0.192  Sum_probs=67.9

Q ss_pred             EEEcCCCCCcccCcccccccCcccccccccCc-CCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccccC
Q 002887          413 SINLSSSGIAGDIVPYIFSLTSIESLDLSKNS-LTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLSVD  491 (870)
Q Consensus       413 ~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~-l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~~~  491 (870)
                      .++..++++. .+|..+..+++|+.|+|++|+ |+..-+..|.+|++|+.|+|++|+|++.-|..+..+++++.|+++.|
T Consensus        12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N   90 (156)
T d2ifga3          12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN   90 (156)
T ss_dssp             CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred             eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence            4788999988 788899999999999998765 88544567999999999999999999777888999999999999854


Q ss_pred             C
Q 002887          492 G  492 (870)
Q Consensus       492 ~  492 (870)
                      .
T Consensus        91 ~   91 (156)
T d2ifga3          91 A   91 (156)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 83 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.84  E-value=5.4e-06  Score=83.38  Aligned_cols=97  Identities=14%  Similarity=0.182  Sum_probs=78.8

Q ss_pred             CCccceecCCCC------CCCCcEEEEEcCCCCCcccCcc-cccccCcccccccccCcCCCCCCc-cccCcCCCCeEEec
Q 002887          394 YMWQGINCSYDA------NQSPRIISINLSSSGIAGDIVP-YIFSLTSIESLDLSKNSLTGPVPE-FLAELQSLRVLNLS  465 (870)
Q Consensus       394 ~~W~Gv~C~~~~------~~~~~l~~l~L~~n~l~G~ip~-~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~L~ls  465 (870)
                      |.+..|.|++.+      ..+..++.|+|++|.|+ .||+ .|.+|++|++|+|++|.+...+|. .|..+++|+.|++.
T Consensus         8 C~~~~i~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~   86 (242)
T d1xwdc1           8 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE   86 (242)
T ss_dssp             ECSSEEEEESCSCSSCCSCSCSCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE
T ss_pred             CcCCEEEEeCCCCCCcCCCCCCCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccc
Confidence            577889998632      22347899999999998 5555 689999999999999999877764 57889999999986


Q ss_pred             C-CcCCCCCCCcccccccCCccccccC
Q 002887          466 G-NNLQGSLPSGLSEKVKNGSLSLSVD  491 (870)
Q Consensus       466 ~-N~l~g~ip~~l~~~~~~~~l~~~~~  491 (870)
                      . |+++...|..+..+++++.+.++.+
T Consensus        87 ~~n~l~~~~~~~~~~l~~L~~l~l~~~  113 (242)
T d1xwdc1          87 KANNLLYINPEAFQNLPNLQYLLISNT  113 (242)
T ss_dssp             CCTTCCEECTTSEECCTTCCEEEEESC
T ss_pred             ccccccccccccccccccccccccchh
Confidence            4 7888788888899999998888643


No 84 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.75  E-value=1.2e-05  Score=78.54  Aligned_cols=73  Identities=23%  Similarity=0.350  Sum_probs=32.1

Q ss_pred             cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      .++.|+|++|+|++. ++ +++|++|++|++++|.+. .+|. ++++++|+.|++++|.+...  ..+..++++..|++
T Consensus        63 nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~-~~~~-l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l  135 (199)
T d2omxa2          63 NLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLEL  135 (199)
T ss_dssp             TCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG-GTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred             CcCcCccccccccCc-cc-ccCCcccccccccccccc-cccc-cccccccccccccccccccc--cccchhhhhHHhhh
Confidence            444455555554432 21 444555555555555444 2332 44445555555554444421  12334444444444


No 85 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.71  E-value=1.2e-05  Score=79.22  Aligned_cols=75  Identities=28%  Similarity=0.410  Sum_probs=62.7

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      +.+..++++.|.+++  +..+++|++|+.|++++|++++ +++ +++|++|+.|+|++|+++ .+| .+..+++|+.|++
T Consensus       134 ~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~~-l~~l~~L~~L~Ls~N~i~-~l~-~l~~l~~L~~L~L  207 (210)
T d1h6ta2         134 PQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IVP-LAGLTKLQNLYLSKNHIS-DLR-ALAGLKNLDVLEL  207 (210)
T ss_dssp             TTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-BCG-GGTTCTTCSEEEE
T ss_pred             ccccccccccccccc--cccccccccccccccccccccc-ccc-ccCCCCCCEEECCCCCCC-CCh-hhcCCCCCCEEEc
Confidence            467889999999875  3468889999999999999985 554 889999999999999998 566 5888888888877


Q ss_pred             c
Q 002887          489 S  489 (870)
Q Consensus       489 ~  489 (870)
                      +
T Consensus       208 s  208 (210)
T d1h6ta2         208 F  208 (210)
T ss_dssp             E
T ss_pred             c
Confidence            5


No 86 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.66  E-value=1.6e-05  Score=85.18  Aligned_cols=75  Identities=20%  Similarity=0.301  Sum_probs=61.1

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      ..|+.|+|++++++ .| ..|..|++|++|+|++|+|++ +|. +++|++|++|+|++|++++. + .++.+++++.|++
T Consensus        44 ~~l~~L~l~~~~I~-~l-~gl~~L~nL~~L~Ls~N~l~~-l~~-l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~  117 (384)
T d2omza2          44 DQVTTLQADRLGIK-SI-DGVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTL  117 (384)
T ss_dssp             TTCCEEECCSSCCC-CC-TTGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEEC
T ss_pred             CCCCEEECCCCCCC-Cc-cccccCCCCCEEeCcCCcCCC-Ccc-ccCCcccccccccccccccc-c-ccccccccccccc
Confidence            46889999999988 45 468889999999999999995 554 88999999999999999854 3 3778888887776


Q ss_pred             c
Q 002887          489 S  489 (870)
Q Consensus       489 ~  489 (870)
                      +
T Consensus       118 ~  118 (384)
T d2omza2         118 F  118 (384)
T ss_dssp             C
T ss_pred             c
Confidence            5


No 87 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.64  E-value=2.1e-05  Score=77.54  Aligned_cols=74  Identities=23%  Similarity=0.340  Sum_probs=36.9

Q ss_pred             cEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccccc
Q 002887          410 RIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSLS  489 (870)
Q Consensus       410 ~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~~  489 (870)
                      +++.|+|++|.|++ ++ .+++|++|+.|+|++|++++ +| .+..+++|+.|++++|.++ .+ ..+..++.+..+.++
T Consensus        69 ~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~~l~~~  142 (210)
T d1h6ta2          69 NVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLG  142 (210)
T ss_dssp             TCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEECC
T ss_pred             CCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-ccccccccccccccccccc-cc-ccccccccccccccc
Confidence            45555555555553 22 24555555555555555552 44 2455555555555555554 22 234444444444433


No 88 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=97.60  E-value=0.00015  Score=73.01  Aligned_cols=130  Identities=16%  Similarity=0.106  Sum_probs=84.4

Q ss_pred             cccccCc-EEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhcccc--ceeEEEEEecCCeEEEEEEEccCCch
Q 002887          568 VLGKGGF-GTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKN--LTILVGYCDEGANMGLIYEFMANGNL  643 (870)
Q Consensus       568 ~LG~G~f-G~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~n--Iv~l~g~~~~~~~~~LV~Ey~~~gsL  643 (870)
                      .+..|.. +.||+...+ +..+.+|.-....   ...+..|+..++.+....  +.++++++.+....++||+++++.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            3444543 679998877 5567888765442   345678888888875433  45678888888889999999998766


Q ss_pred             hhhhhhcccccccHHHHHHHHHHHHHH---------------------------------------------------HH
Q 002887          644 QAHLLEDKADTLCWERRLQIASESAQG---------------------------------------------------LE  672 (870)
Q Consensus       644 ~~~l~~~~~~~l~~~~~~~i~~~ia~a---------------------------------------------------L~  672 (870)
                      .+....          ....+.++++.                                                   +.
T Consensus        94 ~~~~~~----------~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (255)
T d1nd4a_          94 LSSHLA----------PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA  163 (255)
T ss_dssp             TTSCCC----------HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred             cccccc----------HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHH
Confidence            442100          00111222222                                                   23


Q ss_pred             HHHhCC----CCCceeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887          673 YLHNGC----KPPIVHRDVKSANILLNEKFQAKLADFGLSRI  710 (870)
Q Consensus       673 yLH~~~----~~~IvHrDLKp~NILld~~~~vkL~DFGla~~  710 (870)
                      .+....    .+.++|+|+.|.|||++++..+-|+||+.+..
T Consensus       164 ~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         164 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            332221    22379999999999999887778999997753


No 89 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.59  E-value=1.4e-06  Score=85.71  Aligned_cols=78  Identities=22%  Similarity=0.272  Sum_probs=62.2

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ...++.|+|++|+|+ .|+ .|.+|++|+.|+|++|.|+ .||.....+++|+.|+|++|+++. ++ .+..+++++.|+
T Consensus        47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~  121 (198)
T d1m9la_          47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY  121 (198)
T ss_dssp             TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEE
T ss_pred             ccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cc-cccccccccccc
Confidence            357888999999988 665 5889999999999999987 678766667789999999999884 43 477778888887


Q ss_pred             ccc
Q 002887          488 LSV  490 (870)
Q Consensus       488 ~~~  490 (870)
                      ++.
T Consensus       122 L~~  124 (198)
T d1m9la_         122 MSN  124 (198)
T ss_dssp             ESE
T ss_pred             ccc
Confidence            763


No 90 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.45  E-value=1.9e-06  Score=84.59  Aligned_cols=80  Identities=25%  Similarity=0.267  Sum_probs=66.0

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCC--CcccccccCCcc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLP--SGLSEKVKNGSL  486 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip--~~l~~~~~~~~l  486 (870)
                      .+++.|+|++|.|+ .||..+..+.+|+.|+|++|+++. ++ .+..+++|+.|+|++|+++ .++  ..+..+++|+.|
T Consensus        70 ~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L  145 (198)
T d1m9la_          70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT-NWGEIDKLAALDKLEDL  145 (198)
T ss_dssp             TTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HH-HHHHHHHSSEEEESEEECC-CHHHHHHHTTTTTCSEE
T ss_pred             ccccChhhcccccc-cccccccccccccccccccccccc-cc-cccccccccccccccchhc-cccccccccCCCcccee
Confidence            47899999999997 788777778899999999999994 54 4789999999999999998 444  367888888887


Q ss_pred             ccccCCCC
Q 002887          487 SLSVDGNR  494 (870)
Q Consensus       487 ~~~~~~n~  494 (870)
                      +++  ||+
T Consensus       146 ~L~--~N~  151 (198)
T d1m9la_         146 LLA--GNP  151 (198)
T ss_dssp             EEC--SSH
T ss_pred             ecC--CCc
Confidence            776  553


No 91 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.42  E-value=5.9e-05  Score=73.41  Aligned_cols=76  Identities=20%  Similarity=0.275  Sum_probs=60.6

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      .+++.|+|++|+++ .++ .+..|++|++|+|++|++++. |. +++|++|+.|++++|.+. .+| .+..++.++.|++
T Consensus        40 ~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~-~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l  113 (199)
T d2omxa2          40 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL  113 (199)
T ss_dssp             TTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred             cCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCc-cc-ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence            47888999999988 453 588899999999999999864 43 889999999999999887 444 4777888887777


Q ss_pred             cc
Q 002887          489 SV  490 (870)
Q Consensus       489 ~~  490 (870)
                      +.
T Consensus       114 ~~  115 (199)
T d2omxa2         114 FN  115 (199)
T ss_dssp             CS
T ss_pred             cc
Confidence            53


No 92 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.33  E-value=1.9e-05  Score=74.63  Aligned_cols=41  Identities=34%  Similarity=0.521  Sum_probs=19.1

Q ss_pred             cccCcccccccccCcCCCC--CCccccCcCCCCeEEecCCcCC
Q 002887          430 FSLTSIESLDLSKNSLTGP--VPEFLAELQSLRVLNLSGNNLQ  470 (870)
Q Consensus       430 ~~l~~L~~L~Ls~N~l~g~--iP~~~~~l~~L~~L~ls~N~l~  470 (870)
                      .++++|++|+|++|+|+..  ++..+..+++|+.|||++|+++
T Consensus        62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~  104 (162)
T d1koha1          62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK  104 (162)
T ss_dssp             HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC
T ss_pred             HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc
Confidence            3445555555555555421  1223344455555555555554


No 93 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.28  E-value=0.00014  Score=76.17  Aligned_cols=74  Identities=22%  Similarity=0.342  Sum_probs=50.9

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLS  487 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~  487 (870)
                      ++.++.|+|++|+|+ .||..+   .+|+.|++++|+++ .|++.   .++|++|+|++|+++ .+|. .+.+.+++.|+
T Consensus        57 ~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~  126 (353)
T d1jl5a_          57 PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIID  126 (353)
T ss_dssp             CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred             CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccccccccc-cccc-hhhhccceeec
Confidence            456778888888887 777654   45677777777776 45432   145888888888887 5664 56677777777


Q ss_pred             cccC
Q 002887          488 LSVD  491 (870)
Q Consensus       488 ~~~~  491 (870)
                      ++.+
T Consensus       127 l~~~  130 (353)
T d1jl5a_         127 VDNN  130 (353)
T ss_dssp             CCSS
T ss_pred             cccc
Confidence            6543


No 94 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.24  E-value=0.00013  Score=72.44  Aligned_cols=76  Identities=25%  Similarity=0.392  Sum_probs=61.8

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCcccccccCCcccc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      ..++.|+|.+|+|+ .++ .|.+|++|+.|+|++|++++..|  +..+++|+.|++++|.++ .++ .+..++.+..+.+
T Consensus        41 ~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l  114 (227)
T d1h6ua2          41 DGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDL  114 (227)
T ss_dssp             HTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEEC
T ss_pred             CCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-ccccccccccccc
Confidence            36889999999998 564 68999999999999999986544  789999999999999987 554 5777777777766


Q ss_pred             cc
Q 002887          489 SV  490 (870)
Q Consensus       489 ~~  490 (870)
                      +.
T Consensus       115 ~~  116 (227)
T d1h6ua2         115 TS  116 (227)
T ss_dssp             TT
T ss_pred             cc
Confidence            53


No 95 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.18  E-value=0.00013  Score=76.40  Aligned_cols=64  Identities=27%  Similarity=0.375  Sum_probs=51.4

Q ss_pred             CCcEEEEEcCCCCCcccCcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCCcCCCCCCCccccc
Q 002887          408 SPRIISINLSSSGIAGDIVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGNNLQGSLPSGLSEK  480 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N~l~g~ip~~l~~~  480 (870)
                      .+.++.|+|++|+|+ .||..   +++|+.|+|++|+|+ .||..   +++|+.|+|++|+|+ .+|.....+
T Consensus       283 ~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~~L  346 (353)
T d1jl5a_         283 PPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPESV  346 (353)
T ss_dssp             CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCCTTC
T ss_pred             CCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCcccccc
Confidence            467899999999998 78864   567889999999998 78864   468999999999998 777644333


No 96 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=96.92  E-value=0.0011  Score=71.21  Aligned_cols=75  Identities=17%  Similarity=0.198  Sum_probs=48.3

Q ss_pred             ccccccCcEEEEEEEEC--CeeEEEEEeeccc-------hhhhHHHHHHHHHHHHhc-c--ccceeEEEEEecCCeEEEE
Q 002887          567 RVLGKGGFGTVYHGYLD--DKQVAVKMLSSSS-------VQGYKQFQAEVELLIRAH-H--KNLTILVGYCDEGANMGLI  634 (870)
Q Consensus       567 ~~LG~G~fG~Vy~~~~~--~~~vAVK~l~~~~-------~~~~~~f~~Ei~~l~~l~-H--~nIv~l~g~~~~~~~~~LV  634 (870)
                      +.||.|....||+....  ++.++||.-...-       .....+...|.+.|+.+. +  ..+.+++.+.  ....++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEEE
Confidence            46899999999999864  5678999754311       112334566888887763 2  3345555543  3456789


Q ss_pred             EEEccCCch
Q 002887          635 YEFMANGNL  643 (870)
Q Consensus       635 ~Ey~~~gsL  643 (870)
                      ||++.+..+
T Consensus       110 mE~L~~~~~  118 (392)
T d2pula1         110 MEDLSHLKI  118 (392)
T ss_dssp             ECCCTTSEE
T ss_pred             EeccCCccc
Confidence            999987543


No 97 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.76  E-value=0.00064  Score=67.54  Aligned_cols=77  Identities=26%  Similarity=0.349  Sum_probs=60.7

Q ss_pred             CcEEEEEcCCCCCcccCcccccccCccccc-ccccCcCCCCCCc-cccCcCCCCeEEecCCcCCCCCCC-cccccccCCc
Q 002887          409 PRIISINLSSSGIAGDIVPYIFSLTSIESL-DLSKNSLTGPVPE-FLAELQSLRVLNLSGNNLQGSLPS-GLSEKVKNGS  485 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~ip~~~~~l~~L~~L-~Ls~N~l~g~iP~-~~~~l~~L~~L~ls~N~l~g~ip~-~l~~~~~~~~  485 (870)
                      ..++.|++.+|+++ .++..+.+.++++.+ ++++|+|+ .||. .|..+++|+.|+|++|+|+ .+|. .+.++++|+.
T Consensus       153 ~~l~~L~l~~n~l~-~i~~~~~~~~~l~~~~~l~~n~l~-~l~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~  229 (242)
T d1xwdc1         153 FESVILWLNKNGIQ-EIHNCAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIH-SLPSYGLENLKKLRA  229 (242)
T ss_dssp             SSCEEEECCSSCCC-EECTTTTTTCCEEEEECTTCTTCC-CCCTTTTTTSCCCSEEECTTSCCC-CCCSSSCTTCCEEES
T ss_pred             ccceeeeccccccc-ccccccccchhhhccccccccccc-cccHHHhcCCCCCCEEECCCCcCC-ccCHHHHcCCccccc
Confidence            47889999999999 677777777776655 67888898 5665 5789999999999999999 5554 5777777776


Q ss_pred             ccc
Q 002887          486 LSL  488 (870)
Q Consensus       486 l~~  488 (870)
                      +++
T Consensus       230 l~~  232 (242)
T d1xwdc1         230 RST  232 (242)
T ss_dssp             SSE
T ss_pred             CcC
Confidence            654


No 98 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.59  E-value=0.00017  Score=67.67  Aligned_cols=79  Identities=24%  Similarity=0.230  Sum_probs=61.0

Q ss_pred             CCcEEEEEcCCCCCccc--CcccccccCcccccccccCcCCCCCCc-cccCcCCCCeEEecCCcCCCCCCCc-------c
Q 002887          408 SPRIISINLSSSGIAGD--IVPYIFSLTSIESLDLSKNSLTGPVPE-FLAELQSLRVLNLSGNNLQGSLPSG-------L  477 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~--ip~~~~~l~~L~~L~Ls~N~l~g~iP~-~~~~l~~L~~L~ls~N~l~g~ip~~-------l  477 (870)
                      .+.++.|+|++|+|+..  ++..+..|++|+.|+|++|.++ .+++ ......+|+.|+|++|.+++.....       +
T Consensus        64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~  142 (162)
T d1koha1          64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR  142 (162)
T ss_dssp             CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred             CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCcccchhHHHHHH
Confidence            45799999999999853  4556888999999999999999 5554 2334467999999999998766543       4


Q ss_pred             cccccCCccc
Q 002887          478 SEKVKNGSLS  487 (870)
Q Consensus       478 ~~~~~~~~l~  487 (870)
                      ..++++..|+
T Consensus       143 ~~~P~L~~LD  152 (162)
T d1koha1         143 ERFPKLLRLD  152 (162)
T ss_dssp             TTSTTCCEET
T ss_pred             HHCCCCCEEC
Confidence            4567776654


No 99 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.14  E-value=0.0002  Score=73.76  Aligned_cols=83  Identities=28%  Similarity=0.289  Sum_probs=65.9

Q ss_pred             CCcEEEEEcCCCCCccc-CcccccccCcccccccccCcCCCCCCccccCcCCCCeEEecCC-cCCCC-CCCcccccccCC
Q 002887          408 SPRIISINLSSSGIAGD-IVPYIFSLTSIESLDLSKNSLTGPVPEFLAELQSLRVLNLSGN-NLQGS-LPSGLSEKVKNG  484 (870)
Q Consensus       408 ~~~l~~l~L~~n~l~G~-ip~~~~~l~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~L~ls~N-~l~g~-ip~~l~~~~~~~  484 (870)
                      ..+++.|+|+++.+++. ++.-+.++++|++|+|+++++++..+..++++++|+.|+|+++ .++.. +..-...+++|+
T Consensus        45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~  124 (284)
T d2astb2          45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD  124 (284)
T ss_dssp             CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred             CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence            45899999999998865 4556788999999999999999999999999999999999995 56521 122234567888


Q ss_pred             cccccc
Q 002887          485 SLSLSV  490 (870)
Q Consensus       485 ~l~~~~  490 (870)
                      .|++++
T Consensus       125 ~L~ls~  130 (284)
T d2astb2         125 ELNLSW  130 (284)
T ss_dssp             EEECCC
T ss_pred             cccccc
Confidence            888763


No 100
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=96.06  E-value=0.006  Score=63.45  Aligned_cols=133  Identities=12%  Similarity=0.153  Sum_probs=76.6

Q ss_pred             EEEEEEEEC-CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccce--eEEE-----EEecCCeEEEEEEEccCCchhhh
Q 002887          575 GTVYHGYLD-DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILVG-----YCDEGANMGLIYEFMANGNLQAH  646 (870)
Q Consensus       575 G~Vy~~~~~-~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv--~l~g-----~~~~~~~~~LV~Ey~~~gsL~~~  646 (870)
                      -.||+...+ |+.+++|+.+.. ....+++..|...+..|....+.  ..+.     ....+...+.++++++|..+...
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            479999886 778999997654 23456788899998888544332  1111     12334567889999987543210


Q ss_pred             --------------hhhc-------ccccccHHH-------------------HHHHHHHHHHHHHHHHh----CCCCCc
Q 002887          647 --------------LLED-------KADTLCWER-------------------RLQIASESAQGLEYLHN----GCKPPI  682 (870)
Q Consensus       647 --------------l~~~-------~~~~l~~~~-------------------~~~i~~~ia~aL~yLH~----~~~~~I  682 (870)
                                    ++..       ....+++..                   +..+...+.+.++.+..    ....++
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence                          0100       001111110                   11122222233333322    224478


Q ss_pred             eeCCCCCCCEEEcCCCcEEEEeccCCcc
Q 002887          683 VHRDVKSANILLNEKFQAKLADFGLSRI  710 (870)
Q Consensus       683 vHrDLKp~NILld~~~~vkL~DFGla~~  710 (870)
                      +|+|+.+.|||++++  ..++||+-++.
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ecCCCCcccEEEeCC--ceEEechhccc
Confidence            999999999999754  45899998764


No 101
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48  E-value=0.00074  Score=73.01  Aligned_cols=17  Identities=24%  Similarity=0.352  Sum_probs=7.9

Q ss_pred             ccccCcccccccccCcC
Q 002887          429 IFSLTSIESLDLSKNSL  445 (870)
Q Consensus       429 ~~~l~~L~~L~Ls~N~l  445 (870)
                      +..+++|+.|||++|+|
T Consensus        51 L~~~~~L~~LdLs~N~i   67 (460)
T d1z7xw1          51 LRVNPALAELNLRSNEL   67 (460)
T ss_dssp             HHTCTTCCEEECTTCCC
T ss_pred             HhcCCCCCEEECcCCcC
Confidence            34444444444444444


No 102
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.42  E-value=0.0023  Score=65.39  Aligned_cols=59  Identities=22%  Similarity=0.164  Sum_probs=28.5

Q ss_pred             cccCcccccccccC-cCCCCCCccccCcCCCCeEEecC-CcCCCCCCCcccccccCCcccc
Q 002887          430 FSLTSIESLDLSKN-SLTGPVPEFLAELQSLRVLNLSG-NNLQGSLPSGLSEKVKNGSLSL  488 (870)
Q Consensus       430 ~~l~~L~~L~Ls~N-~l~g~iP~~~~~l~~L~~L~ls~-N~l~g~ip~~l~~~~~~~~l~~  488 (870)
                      .++++|+.|+|++| .+++..+..++++++|+.|+|++ +++++.....++++++|+.|++
T Consensus       172 ~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l  232 (284)
T d2astb2         172 RRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV  232 (284)
T ss_dssp             HHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEEC
T ss_pred             cccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEee
Confidence            34455555555543 34444444455555555555555 3444444444444455554444


No 103
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=95.31  E-value=0.027  Score=59.93  Aligned_cols=72  Identities=15%  Similarity=0.229  Sum_probs=49.2

Q ss_pred             ccccccCcEEEEEEEEC---------CeeEEEEEeeccchhhhHHHHHHHHHHHHhccccc-eeEEEEEecCCeEEEEEE
Q 002887          567 RVLGKGGFGTVYHGYLD---------DKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNL-TILVGYCDEGANMGLIYE  636 (870)
Q Consensus       567 ~~LG~G~fG~Vy~~~~~---------~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nI-v~l~g~~~~~~~~~LV~E  636 (870)
                      +.|+.|-.-.+|+....         .+.|.+++....  .......+|..+++.+.-.++ .++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            46888999999999864         234666665432  223345689999988854454 477787754    58999


Q ss_pred             EccCCchh
Q 002887          637 FMANGNLQ  644 (870)
Q Consensus       637 y~~~gsL~  644 (870)
                      |+++..+.
T Consensus       122 fi~g~~l~  129 (395)
T d1nw1a_         122 YIPSRPLS  129 (395)
T ss_dssp             CCCEEECC
T ss_pred             EeccccCC
Confidence            99876553


No 104
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.09  E-value=0.042  Score=56.20  Aligned_cols=140  Identities=9%  Similarity=0.038  Sum_probs=74.4

Q ss_pred             cccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccce--eEEE------EEecCCeEEEEEEEcc
Q 002887          568 VLGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLT--ILVG------YCDEGANMGLIYEFMA  639 (870)
Q Consensus       568 ~LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv--~l~g------~~~~~~~~~LV~Ey~~  639 (870)
                      .|..|---+.|+...++..+++|+.....  ..++...|++++..+.+.++.  ..+.      ..........++.++.
T Consensus        25 ~i~~G~~N~ny~v~t~~g~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~~~~~~~  102 (316)
T d2ppqa1          25 GIAEGVENSNFLLHTTKDPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLE  102 (316)
T ss_dssp             EECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECCC
T ss_pred             cCCCCcccCeEEEEECCCcEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccceeeeecc
Confidence            35567778889998887779999876532  234556677777777544332  1111      0112344566677766


Q ss_pred             CCchhhhh--------------hhc-------cc--ccccH----------------HHHHHHHHHHHHHHHHHHh-CCC
Q 002887          640 NGNLQAHL--------------LED-------KA--DTLCW----------------ERRLQIASESAQGLEYLHN-GCK  679 (870)
Q Consensus       640 ~gsL~~~l--------------~~~-------~~--~~l~~----------------~~~~~i~~~ia~aL~yLH~-~~~  679 (870)
                      +......-              +..       ..  ....|                ......+......+.-.+. ...
T Consensus       103 g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L~  182 (316)
T d2ppqa1         103 GMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLP  182 (316)
T ss_dssp             CBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCSSC
T ss_pred             cccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhccCccccc
Confidence            54332110              000       00  00000                0011122222222232222 224


Q ss_pred             CCceeCCCCCCCEEEcCCCcEEEEeccCCc
Q 002887          680 PPIVHRDVKSANILLNEKFQAKLADFGLSR  709 (870)
Q Consensus       680 ~~IvHrDLKp~NILld~~~~vkL~DFGla~  709 (870)
                      .++||+|+.+.||+++++...-|.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            479999999999999998777899999875


No 105
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=94.53  E-value=0.0021  Score=67.41  Aligned_cols=63  Identities=21%  Similarity=0.290  Sum_probs=44.7

Q ss_pred             cEEEEEcCCCCCccc-----CcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCCC
Q 002887          410 RIISINLSSSGIAGD-----IVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQGS  472 (870)
Q Consensus       410 ~l~~l~L~~n~l~G~-----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g~  472 (870)
                      .++.|+|++|+++..     +...+..+++|+.|+|++|.++..    +...+..+++|+.|+|++|++++.
T Consensus       187 ~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~  258 (344)
T d2ca6a1         187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR  258 (344)
T ss_dssp             TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred             hhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCch
Confidence            577788888887632     344567778888888888887532    445566778888888888887643


No 106
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.44  E-value=0.0024  Score=68.82  Aligned_cols=81  Identities=23%  Similarity=0.260  Sum_probs=59.4

Q ss_pred             CcEEEEEcCCCCCccc-CcccccccCcccccccccCcCC----CCCCccccCcCCCCeEEecCCcCCCC----CCCcccc
Q 002887          409 PRIISINLSSSGIAGD-IVPYIFSLTSIESLDLSKNSLT----GPVPEFLAELQSLRVLNLSGNNLQGS----LPSGLSE  479 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~-ip~~~~~l~~L~~L~Ls~N~l~----g~iP~~~~~l~~L~~L~ls~N~l~g~----ip~~l~~  479 (870)
                      ..|+.|||++|++++. +..-+..|++|+.|+|++|+++    ..|+..+..+++|+.|||++|+++..    +...+..
T Consensus         2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~   81 (460)
T d1z7xw1           2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT   81 (460)
T ss_dssp             EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred             CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence            4789999999999974 2444677899999999999987    24566678899999999999998621    1122221


Q ss_pred             -cccCCccccc
Q 002887          480 -KVKNGSLSLS  489 (870)
Q Consensus       480 -~~~~~~l~~~  489 (870)
                       ..+++.|+++
T Consensus        82 ~~~~L~~L~L~   92 (460)
T d1z7xw1          82 PSCKIQKLSLQ   92 (460)
T ss_dssp             TTCCCCEEECT
T ss_pred             CCCCCCEEECC
Confidence             2356666665


No 107
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=93.39  E-value=0.0047  Score=64.59  Aligned_cols=81  Identities=22%  Similarity=0.236  Sum_probs=62.1

Q ss_pred             CcEEEEEcCCCCCcc----cCcccccccCcccccccccCcCCCC-----CCccccCcCCCCeEEecCCcCCCC----CCC
Q 002887          409 PRIISINLSSSGIAG----DIVPYIFSLTSIESLDLSKNSLTGP-----VPEFLAELQSLRVLNLSGNNLQGS----LPS  475 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G----~ip~~~~~l~~L~~L~Ls~N~l~g~-----iP~~~~~l~~L~~L~ls~N~l~g~----ip~  475 (870)
                      +.++.|++++|.++-    .+...+..++.|+.|+|++|+++..     +...+..+++|+.|+|++|+++..    +..
T Consensus       158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~  237 (344)
T d2ca6a1         158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI  237 (344)
T ss_dssp             CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred             cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc
Confidence            467889999998863    3455577889999999999998742     345577889999999999998633    444


Q ss_pred             cccccccCCccccc
Q 002887          476 GLSEKVKNGSLSLS  489 (870)
Q Consensus       476 ~l~~~~~~~~l~~~  489 (870)
                      .+..+++++.|+++
T Consensus       238 ~l~~~~~L~~L~Ls  251 (344)
T d2ca6a1         238 ALKSWPNLRELGLN  251 (344)
T ss_dssp             HGGGCTTCCEEECT
T ss_pred             cccccccchhhhhh
Confidence            56677788877775


No 108
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=93.20  E-value=0.0061  Score=56.86  Aligned_cols=42  Identities=29%  Similarity=0.430  Sum_probs=18.5

Q ss_pred             ccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCC
Q 002887          429 IFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQ  470 (870)
Q Consensus       429 ~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~  470 (870)
                      +...+.|+.|+|++|.++..    +-+.+...+.|+.|+|++|+++
T Consensus        40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~   85 (167)
T d1pgva_          40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT   85 (167)
T ss_dssp             HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred             HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence            33444455555555544321    1122333344555555555544


No 109
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=91.10  E-value=0.031  Score=51.81  Aligned_cols=62  Identities=18%  Similarity=0.203  Sum_probs=47.9

Q ss_pred             CcEEEEEcCCCCCccc----CcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCC
Q 002887          409 PRIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQ  470 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~  470 (870)
                      ..|+.|+|++|++...    +...+...+.|+.|+|++|.++..    +=..+...++|+.|+|++|.+.
T Consensus        44 ~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          44 KHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             SCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred             CccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence            4789999999999743    334456678999999999998853    2234566688999999999765


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=88.78  E-value=0.027  Score=51.96  Aligned_cols=85  Identities=19%  Similarity=0.255  Sum_probs=53.9

Q ss_pred             CcEEEEEcCC-CCCccc----CcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEecCCcCCCCC----CC
Q 002887          409 PRIISINLSS-SGIAGD----IVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNLSGNNLQGSL----PS  475 (870)
Q Consensus       409 ~~l~~l~L~~-n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~ls~N~l~g~i----p~  475 (870)
                      +.++.|+|++ +.++..    +-..+...++|+.|+|++|.++..    |-..+...++|+.|++++|.++..-    -.
T Consensus        17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~   96 (166)
T d1io0a_          17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE   96 (166)
T ss_dssp             TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred             CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence            5788888887 456532    334456778899999999887654    2233455688899999988876331    12


Q ss_pred             cccccccCCccccccCCC
Q 002887          476 GLSEKVKNGSLSLSVDGN  493 (870)
Q Consensus       476 ~l~~~~~~~~l~~~~~~n  493 (870)
                      .+...+.++.+++..++|
T Consensus        97 ~l~~~~~L~~l~L~l~~n  114 (166)
T d1io0a_          97 ALQSNTSLIELRIDNQSQ  114 (166)
T ss_dssp             GGGGCSSCCEEECCCCSS
T ss_pred             HHHhCccccEEeeccCCC
Confidence            344455555555543333


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=81.25  E-value=0.058  Score=49.62  Aligned_cols=82  Identities=13%  Similarity=0.184  Sum_probs=57.5

Q ss_pred             CcEEEEEcCCCCCccc----CcccccccCcccccccccCcCCCC----CCccccCcCCCCeEEe--cCCcCCC----CCC
Q 002887          409 PRIISINLSSSGIAGD----IVPYIFSLTSIESLDLSKNSLTGP----VPEFLAELQSLRVLNL--SGNNLQG----SLP  474 (870)
Q Consensus       409 ~~l~~l~L~~n~l~G~----ip~~~~~l~~L~~L~Ls~N~l~g~----iP~~~~~l~~L~~L~l--s~N~l~g----~ip  474 (870)
                      +.++.|+|++|+++..    |-..+...++|+.|++++|.++..    +-..+...++|+.++|  ++|++..    .|-
T Consensus        46 ~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La  125 (166)
T d1io0a_          46 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA  125 (166)
T ss_dssp             CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred             CccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHH
Confidence            4789999999998754    334566789999999999998754    3355677889998666  5666642    233


Q ss_pred             CcccccccCCcccccc
Q 002887          475 SGLSEKVKNGSLSLSV  490 (870)
Q Consensus       475 ~~l~~~~~~~~l~~~~  490 (870)
                      ..+...+.+..|++++
T Consensus       126 ~~L~~n~~L~~L~l~~  141 (166)
T d1io0a_         126 NMLEKNTTLLKFGYHF  141 (166)
T ss_dssp             HHHHHCSSCCEEECCC
T ss_pred             HHHHhCCCcCEEeCcC
Confidence            3445666677766654


No 112
>d2o14a1 b.18.1.32 (A:14-159) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=69.60  E-value=23  Score=30.74  Aligned_cols=82  Identities=9%  Similarity=0.055  Sum_probs=53.3

Q ss_pred             CcccceecCCCCCCccEEEEeeeeeccCCCCCCCCceEEEEcceeeEEEEcCCCccceeEEEEEecCCCceEEEEeecCC
Q 002887           88 GIRNCYTLRPPNGDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAWDSVQLQDPRSIITKEIIHMPNKDYIHVCLVNTDS  167 (870)
Q Consensus        88 g~~ncY~l~~~~~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~v~~~~~~~~~~~e~~~~~~~~~~~vcl~~t~~  167 (870)
                      +...-|.+..  +.|.|-|++.+.  +      +-..++.+.|-.-..-.   ..........+-+.++.+.+=|.....
T Consensus        62 ~~~~~f~v~v--PnG~Y~Vtv~~G--d------~~~~~~~~eg~~~~~~~---~g~~~~~~~~V~VtDG~L~l~ft~~~~  128 (146)
T d2o14a1          62 KSNNTFNVDL--PNGLYEVKVTLG--N------TARASVAAEGVFQVINM---TGDGAEDTFQIPVTDGQLNLLVTEGKA  128 (146)
T ss_dssp             TCSCCEEEEC--CSEEEEEEEEES--S------CSEEEEEETTEEEEEEE---ESTTCEEEEEEEECSSEEEEEEEESST
T ss_pred             CCCceEEEEC--CCCeEEEEEEEe--c------CCCccEEEeeEEecccc---CCccEEEEEEEEEECCeEEEEEecCCC
Confidence            3455677733  367999999874  2      22356777664321111   112233456778889999998877765


Q ss_pred             C-CceeeeeeeeecCC
Q 002887          168 G-IPFISALELRPLTN  182 (870)
Q Consensus       168 ~-~pfis~lEl~~l~~  182 (870)
                      | .|=||+||+.++.+
T Consensus       129 G~~~~in~l~I~~~~d  144 (146)
T d2o14a1         129 GTAFTLSALKIKKLSD  144 (146)
T ss_dssp             TSCCEEEEEEEEEEES
T ss_pred             CCccEEEEEEEEeccc
Confidence            5 59999999998754


No 113
>d1ji6a1 b.18.1.3 (A:503-652) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]}
Probab=29.96  E-value=1.2e+02  Score=25.98  Aligned_cols=74  Identities=8%  Similarity=0.147  Sum_probs=44.0

Q ss_pred             ccEEEEeeeeeccCCCCCCCCceEEEEcceeeEEEEcCCC-----c----cceeEEE---EEe-cCCCceEEEEeecC-C
Q 002887          102 VKFLIRARFMYGNYDGLDKAPSFDLMLGADAWDSVQLQDP-----R----SIITKEI---IHM-PNKDYIHVCLVNTD-S  167 (870)
Q Consensus       102 ~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~v~~~~~-----~----~~~~~e~---~~~-~~~~~~~vcl~~t~-~  167 (870)
                      .||-||..|---      ..-.|++..+++.+..++....     .    +..+.|.   +-+ ...+.+.+-+-+.. .
T Consensus        62 q~YrVRIRYAS~------~~~~l~v~~~~~~~~~~~~~~T~~~~~~l~y~sF~Y~~~~~~~~~~~~~~~~~i~~~~~~~~  135 (150)
T d1ji6a1          62 QRYRVRIRYAST------TNLRLFVQNSNNDFLVIYINKTMNKDDDLTYQTFDLATTNSNMGFSGDKNELIIGAESFVSN  135 (150)
T ss_dssp             CEEEEEEEEEES------SCEEEEEEETTCCEEEEEECCCSCTTCCCCGGGCEEEECSCCEECCSSCEEEEEEECCCCTT
T ss_pred             eEEEEEEEEeeC------CCcEEEEEeCCcceEEeeccccccCCCCccccceEeEEeeeeeEeeCCCceEEEEEeecCCC
Confidence            589999998752      2346888888888877764211     1    1123453   222 22333444444433 3


Q ss_pred             CCceeeeeeeeecC
Q 002887          168 GIPFISALELRPLT  181 (870)
Q Consensus       168 ~~pfis~lEl~~l~  181 (870)
                      +.=+|-.||+.|++
T Consensus       136 ~~vyIDrIEFIPVd  149 (150)
T d1ji6a1         136 EKIYIDKIEFIPVQ  149 (150)
T ss_dssp             CCEEEEEEEEEECC
T ss_pred             CcEEEEeEEEEccc
Confidence            43459999999986


No 114
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=28.61  E-value=94  Score=30.23  Aligned_cols=135  Identities=13%  Similarity=0.091  Sum_probs=75.9

Q ss_pred             ccccCcEEEEEEEECCeeEEEEEeeccchhhhHHHHHHHHHHHHhccccceeEEEEEe----------------------
Q 002887          569 LGKGGFGTVYHGYLDDKQVAVKMLSSSSVQGYKQFQAEVELLIRAHHKNLTILVGYCD----------------------  626 (870)
Q Consensus       569 LG~G~fG~Vy~~~~~~~~vAVK~l~~~~~~~~~~f~~Ei~~l~~l~H~nIv~l~g~~~----------------------  626 (870)
                      +..+|.+-|+-+..++..+++|.-..   ...+.|-.|+...-.++-|...-+ ..+.                      
T Consensus        76 ~s~~Gs~Gv~FV~~e~gaiVlK~s~t---ta~E~y~~eLAr~LGvpvPqmRvI-~~~~~E~~~~~~~~l~~~e~d~~I~s  151 (342)
T d1cjaa_          76 RSEKGTEGLFFVETESGVFIVKRSTN---IESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDKSFRVITT  151 (342)
T ss_dssp             ECCSTTSCEEEEEESSCEEEEECCTT---HHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred             EeecCCceEEEEEcCCceEEEecCCc---hHHHHHHHHHHHHhCCCCCceEEe-cCCCHHHHHHHHHHhcCCChhHHHHH
Confidence            34444544555566667777887331   223455666666666677775543 2221                      


Q ss_pred             -cCCeEEEEEEEccCCchhhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCCCceeCCC-CCCCEEEcCCC-cEEEE
Q 002887          627 -EGANMGLIYEFMANGNLQAHLLEDKADTLCWERRLQIASESAQGLEYLHNGCKPPIVHRDV-KSANILLNEKF-QAKLA  703 (870)
Q Consensus       627 -~~~~~~LV~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~IvHrDL-Kp~NILld~~~-~vkL~  703 (870)
                       -.....++|||.+|..+.+.-.......+... +++=+..|+--=.++|..++.++.+|+- .+.||++++++ .+..+
T Consensus       152 el~~A~~liMeYvpG~~l~e~~~~~a~~~fs~~-~l~~LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~~~~~I  230 (342)
T d1cjaa_         152 LANQANILLMELVRGITLNKLTTTSAPEVLTKS-TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPI  230 (342)
T ss_dssp             HTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH-HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEEC
T ss_pred             HHhcccceeeeccCCccccccccccchhhhcHH-HHHHhhhHHHHHHHHcCCccccccccCCCCccceEEecCCcEEEEe
Confidence             12346789999998877654321111122222 2221222333335677777778888843 88999998876 56777


Q ss_pred             eccCC
Q 002887          704 DFGLS  708 (870)
Q Consensus       704 DFGla  708 (870)
                      |=|..
T Consensus       231 Ds~i~  235 (342)
T d1cjaa_         231 DSKII  235 (342)
T ss_dssp             SCCCC
T ss_pred             cCCcc
Confidence            74443


No 115
>d1dlca1 b.18.1.3 (A:500-644) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=20.62  E-value=2.3e+02  Score=23.78  Aligned_cols=76  Identities=13%  Similarity=0.232  Sum_probs=46.3

Q ss_pred             CCccEEEEeeeeeccCCCCCCCCceEEEEcceeeEEEEcCCC--------c-cceeEEE--EEecCCCceEEEEeecCCC
Q 002887          100 GDVKFLIRARFMYGNYDGLDKAPSFDLMLGADAWDSVQLQDP--------R-SIITKEI--IHMPNKDYIHVCLVNTDSG  168 (870)
Q Consensus       100 ~~~~ylvR~~f~ygnyd~~~~~p~Fd~~~~~~~w~~v~~~~~--------~-~~~~~e~--~~~~~~~~~~vcl~~t~~~  168 (870)
                      ...||-||..|--.      ..-.+.+.+++..+...+.+..        + +..+.|+  .|....+.+.+-+-+..++
T Consensus        58 ~~q~YrvRIRYAs~------~~~~~~~~~~~~~~~~~~~~~T~~~~~~l~y~~F~y~~~~~~~~~~~~~~~i~i~~~~~~  131 (145)
T d1dlca1          58 YSQKYRARIHYAST------SQITFTLSLDGAPFNQYYFDKTINKGDTLTYNSFNLASFSTPFELSGNNLQIGVTGLSAG  131 (145)
T ss_dssp             SCCEEEEEEEEEES------SCEEEEEEETTEEEEEEEECCCCCTTCCCCGGGCEEEECSSCEECCCSEEEEEEECCCTT
T ss_pred             CceEEEEEEEEecC------CCcEEEEEeCCcceEEEEecceeecCCCccEeeeEeEEEeEEEEecCCcEEEEEEECCCC
Confidence            34589999998752      2346888888887766553211        1 1122343  2344556666655554344


Q ss_pred             Cc-eeeeeeeeecC
Q 002887          169 IP-FISALELRPLT  181 (870)
Q Consensus       169 ~p-fis~lEl~~l~  181 (870)
                      .+ +|-.||+.|++
T Consensus       132 ~~v~IDrIEFIPvd  145 (145)
T d1dlca1         132 DKVYIDKIEFIPVN  145 (145)
T ss_dssp             CCEEEEEEEEEEEC
T ss_pred             CcEEEEeEEEEeCC
Confidence            34 69999999975


Done!