Query 002891
Match_columns 870
No_of_seqs 240 out of 1008
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 05:35:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lq6_A Bromodomain-containing 99.2 4.8E-12 1.7E-16 113.4 3.0 64 576-639 10-84 (87)
2 2ku3_A Bromodomain-containing 99.0 2.5E-10 8.7E-15 98.8 4.1 55 456-510 13-68 (71)
3 2l43_A N-teminal domain from h 98.8 1.2E-09 4.1E-14 98.1 3.3 54 456-509 22-76 (88)
4 1wev_A Riken cDNA 1110020M19; 98.7 5.5E-09 1.9E-13 93.6 2.8 58 454-511 11-75 (88)
5 2yt5_A Metal-response element- 98.7 1.5E-08 5.3E-13 85.4 4.5 51 458-508 5-61 (66)
6 4gne_A Histone-lysine N-methyl 98.4 2.5E-07 8.5E-12 86.0 7.0 76 457-549 13-96 (107)
7 1xwh_A Autoimmune regulator; P 98.4 2.2E-07 7.7E-12 78.8 5.2 52 455-510 4-57 (66)
8 2yql_A PHD finger protein 21A; 98.4 2.6E-07 9E-12 75.9 4.5 49 455-507 5-55 (56)
9 1f62_A Transcription factor WS 98.3 2.3E-07 7.9E-12 74.6 3.0 46 461-507 2-49 (51)
10 1mm2_A MI2-beta; PHD, zinc fin 98.3 3.2E-07 1.1E-11 76.9 4.0 49 456-508 6-56 (61)
11 2l5u_A Chromodomain-helicase-D 98.3 6.4E-07 2.2E-11 75.1 4.8 51 454-508 6-58 (61)
12 2puy_A PHD finger protein 21A; 98.2 6E-07 2.1E-11 74.7 4.2 48 458-509 4-53 (60)
13 2e6r_A Jumonji/ARID domain-con 98.2 6.2E-07 2.1E-11 81.0 3.8 51 457-508 14-66 (92)
14 2lri_C Autoimmune regulator; Z 98.2 9.4E-07 3.2E-11 75.5 4.0 46 459-508 12-59 (66)
15 2ysm_A Myeloid/lymphoid or mix 98.2 2.9E-06 9.8E-11 78.3 7.3 94 457-589 5-103 (111)
16 1fp0_A KAP-1 corepressor; PHD 98.1 1.7E-06 5.8E-11 77.9 5.1 51 454-508 20-72 (88)
17 3v43_A Histone acetyltransfera 98.1 2.1E-06 7.3E-11 79.7 5.7 92 460-589 6-111 (112)
18 2e6s_A E3 ubiquitin-protein li 98.0 4.4E-06 1.5E-10 73.4 4.5 46 461-507 28-76 (77)
19 2kwj_A Zinc finger protein DPF 98.0 4.6E-06 1.6E-10 77.7 4.6 92 460-589 2-107 (114)
20 1wen_A Inhibitor of growth fam 97.9 1E-05 3.6E-10 69.9 5.1 49 458-509 15-66 (71)
21 3asl_A E3 ubiquitin-protein li 97.9 6.2E-06 2.1E-10 71.0 3.6 46 461-507 20-68 (70)
22 2kwj_A Zinc finger protein DPF 97.8 8.9E-06 3.1E-10 75.8 4.0 51 459-510 58-110 (114)
23 3shb_A E3 ubiquitin-protein li 97.8 8.8E-06 3E-10 71.5 3.6 46 461-507 28-76 (77)
24 3o36_A Transcription intermedi 97.8 1.5E-05 5E-10 79.5 4.4 48 458-509 3-52 (184)
25 2jmi_A Protein YNG1, ING1 homo 97.8 1.4E-05 4.8E-10 72.2 3.8 51 457-510 24-78 (90)
26 2vnf_A ING 4, P29ING4, inhibit 97.8 9.4E-06 3.2E-10 67.9 2.4 47 458-507 9-58 (60)
27 2k16_A Transcription initiatio 97.7 1.3E-05 4.4E-10 69.2 3.3 53 457-510 16-70 (75)
28 3u5n_A E3 ubiquitin-protein li 97.7 1.6E-05 5.3E-10 80.8 4.1 49 457-509 5-55 (207)
29 3c6w_A P28ING5, inhibitor of g 97.7 1.4E-05 4.8E-10 66.7 2.5 47 458-507 8-57 (59)
30 3v43_A Histone acetyltransfera 97.7 2.6E-05 8.8E-10 72.4 4.2 50 458-507 60-111 (112)
31 1weu_A Inhibitor of growth fam 97.6 3.2E-05 1.1E-09 70.0 4.0 50 457-509 34-86 (91)
32 2g6q_A Inhibitor of growth pro 97.6 2.2E-05 7.6E-10 66.2 2.5 47 458-507 10-59 (62)
33 2ro1_A Transcription intermedi 97.5 3.4E-05 1.2E-09 77.7 3.0 46 459-508 2-49 (189)
34 3ask_A E3 ubiquitin-protein li 97.4 6.6E-05 2.3E-09 78.0 4.0 47 460-507 175-224 (226)
35 2ysm_A Myeloid/lymphoid or mix 97.3 0.00012 4.2E-09 67.4 4.0 49 459-508 54-104 (111)
36 2lv9_A Histone-lysine N-methyl 97.3 0.00023 7.8E-09 64.8 5.6 45 460-507 29-75 (98)
37 1we9_A PHD finger family prote 97.3 0.00027 9.2E-09 59.1 5.4 53 456-508 3-58 (64)
38 1x4i_A Inhibitor of growth pro 97.2 0.00014 4.9E-09 62.6 2.7 48 459-509 6-56 (70)
39 1wee_A PHD finger family prote 97.0 0.00061 2.1E-08 58.5 4.5 51 458-509 15-67 (72)
40 3o70_A PHD finger protein 13; 96.9 0.00082 2.8E-08 57.6 4.8 48 458-507 18-66 (68)
41 1wew_A DNA-binding family prot 96.9 0.00069 2.4E-08 59.2 4.4 50 458-509 15-73 (78)
42 2vpb_A Hpygo1, pygopus homolog 96.9 0.00033 1.1E-08 59.6 2.1 49 458-506 7-64 (65)
43 1wem_A Death associated transc 96.7 0.00072 2.5E-08 58.5 2.9 50 458-509 15-71 (76)
44 1wep_A PHF8; structural genomi 96.6 0.00089 3E-08 58.5 2.4 51 458-509 11-64 (79)
45 2xb1_A Pygopus homolog 2, B-ce 96.4 0.0017 5.7E-08 60.0 3.4 50 460-509 4-62 (105)
46 2ri7_A Nucleosome-remodeling f 96.4 0.00058 2E-08 67.1 0.1 51 457-508 6-59 (174)
47 2rsd_A E3 SUMO-protein ligase 96.3 0.0034 1.2E-07 53.4 4.5 48 459-508 10-65 (68)
48 2kgg_A Histone demethylase jar 96.3 0.0015 5E-08 52.9 2.1 46 461-506 4-52 (52)
49 3o7a_A PHD finger protein 13 v 95.9 0.0052 1.8E-07 49.7 3.6 45 462-507 6-51 (52)
50 3kqi_A GRC5, PHD finger protei 95.6 0.004 1.4E-07 53.9 1.8 50 460-509 10-62 (75)
51 2lbm_A Transcriptional regulat 95.3 0.0053 1.8E-07 59.7 1.9 46 458-507 62-116 (142)
52 3ql9_A Transcriptional regulat 94.1 0.01 3.6E-07 56.8 0.5 46 458-507 56-110 (129)
53 3kv5_D JMJC domain-containing 93.9 0.014 4.8E-07 66.7 1.0 49 460-509 38-89 (488)
54 3lqh_A Histone-lysine N-methyl 92.9 0.031 1.1E-06 56.3 1.6 49 459-507 2-62 (183)
55 3kv4_A PHD finger protein 8; e 91.0 0.032 1.1E-06 63.2 -1.0 51 460-510 5-58 (447)
56 1we9_A PHD finger family prote 88.5 0.2 7E-06 41.5 2.3 31 581-613 6-39 (64)
57 1wew_A DNA-binding family prot 88.0 0.19 6.5E-06 43.7 1.9 32 581-613 16-49 (78)
58 2rsd_A E3 SUMO-protein ligase 87.3 0.26 8.9E-06 41.8 2.2 30 581-611 10-41 (68)
59 1wem_A Death associated transc 85.5 0.37 1.3E-05 41.4 2.3 30 581-613 16-47 (76)
60 3pur_A Lysine-specific demethy 84.9 0.51 1.7E-05 54.5 3.7 37 473-509 56-95 (528)
61 1weu_A Inhibitor of growth fam 84.9 0.73 2.5E-05 41.7 4.0 32 581-613 36-69 (91)
62 1wil_A KIAA1045 protein; ring 84.7 0.32 1.1E-05 43.7 1.5 49 458-508 14-76 (89)
63 1wen_A Inhibitor of growth fam 84.3 0.72 2.5E-05 39.7 3.6 33 580-613 15-49 (71)
64 3o70_A PHD finger protein 13; 84.1 0.46 1.6E-05 40.5 2.2 31 581-614 19-51 (68)
65 2zet_C Melanophilin; complex, 83.7 0.46 1.6E-05 46.6 2.3 48 460-508 69-117 (153)
66 2lv9_A Histone-lysine N-methyl 83.6 0.47 1.6E-05 43.0 2.2 46 582-639 29-76 (98)
67 1wep_A PHF8; structural genomi 83.4 0.4 1.4E-05 41.6 1.6 30 581-613 12-44 (79)
68 3c6w_A P28ING5, inhibitor of g 83.2 0.53 1.8E-05 39.0 2.2 32 581-613 9-42 (59)
69 2k16_A Transcription initiatio 82.8 0.42 1.5E-05 40.8 1.5 32 581-614 18-51 (75)
70 1xwh_A Autoimmune regulator; P 82.8 0.63 2.2E-05 39.1 2.5 31 581-614 8-38 (66)
71 2puy_A PHD finger protein 21A; 82.7 0.54 1.8E-05 38.7 2.0 48 581-639 5-52 (60)
72 2g6q_A Inhibitor of growth pro 82.4 0.54 1.8E-05 39.4 2.0 33 581-614 11-45 (62)
73 1wee_A PHD finger family prote 82.3 0.51 1.8E-05 40.2 1.8 31 581-614 16-49 (72)
74 2yql_A PHD finger protein 21A; 82.3 0.84 2.9E-05 37.1 3.0 31 581-614 9-39 (56)
75 2xb1_A Pygopus homolog 2, B-ce 81.9 0.68 2.3E-05 42.6 2.6 30 582-612 4-36 (105)
76 2lri_C Autoimmune regulator; Z 80.6 0.7 2.4E-05 39.2 2.1 31 581-614 12-42 (66)
77 1mm2_A MI2-beta; PHD, zinc fin 80.4 0.66 2.3E-05 38.5 1.8 31 581-614 9-39 (61)
78 2vnf_A ING 4, P29ING4, inhibit 79.5 0.79 2.7E-05 38.0 2.0 32 581-613 10-43 (60)
79 2l5u_A Chromodomain-helicase-D 79.2 0.7 2.4E-05 38.4 1.6 31 581-614 11-41 (61)
80 2ri7_A Nucleosome-remodeling f 79.2 0.49 1.7E-05 46.3 0.7 29 581-612 8-39 (174)
81 2kgg_A Histone demethylase jar 78.5 1 3.4E-05 36.2 2.2 30 583-613 4-36 (52)
82 2jmi_A Protein YNG1, ING1 homo 78.4 0.98 3.3E-05 40.8 2.4 31 581-612 26-58 (90)
83 4bbq_A Lysine-specific demethy 76.8 0.92 3.1E-05 41.6 1.7 37 472-508 72-114 (117)
84 3o7a_A PHD finger protein 13 v 76.6 1.1 3.9E-05 35.9 2.0 28 585-614 7-36 (52)
85 1f62_A Transcription factor WS 76.2 0.99 3.4E-05 35.8 1.6 29 583-613 2-32 (51)
86 4bbq_A Lysine-specific demethy 74.5 3 0.0001 38.1 4.6 81 459-562 7-97 (117)
87 2ku3_A Bromodomain-containing 73.6 1.7 5.9E-05 37.3 2.5 33 580-614 15-51 (71)
88 4gne_A Histone-lysine N-methyl 72.9 2.5 8.4E-05 39.2 3.5 32 580-612 14-45 (107)
89 2yt5_A Metal-response element- 72.4 1.7 6E-05 36.0 2.2 32 581-614 6-41 (66)
90 1zbd_B Rabphilin-3A; G protein 72.4 2.4 8.2E-05 40.7 3.5 49 460-508 56-107 (134)
91 2yuu_A NPKC-delta, protein kin 72.3 3.6 0.00012 35.9 4.3 34 459-492 28-62 (83)
92 4b6d_A RAC GTPase-activating p 72.2 1.7 5.9E-05 36.3 2.1 35 459-493 19-53 (61)
93 1faq_A RAF-1; transferase, ser 71.8 2.8 9.5E-05 33.1 3.2 32 459-493 14-45 (52)
94 2vpb_A Hpygo1, pygopus homolog 71.6 1.5 5.2E-05 37.1 1.7 31 581-612 8-41 (65)
95 2enn_A NPKC-theta, protein kin 71.0 2.8 9.6E-05 36.2 3.3 35 459-493 34-69 (77)
96 1ptq_A Protein kinase C delta 70.8 3 0.0001 32.5 3.2 34 459-492 11-45 (50)
97 3o36_A Transcription intermedi 70.8 1.6 5.4E-05 43.2 1.9 30 581-613 4-33 (184)
98 1fp0_A KAP-1 corepressor; PHD 70.8 1.8 6E-05 39.0 2.0 48 580-638 24-71 (88)
99 3asl_A E3 ubiquitin-protein li 70.2 1.9 6.5E-05 36.8 2.0 29 583-613 20-50 (70)
100 2enz_A NPKC-theta, protein kin 70.1 4.1 0.00014 33.9 4.0 34 459-492 23-57 (65)
101 3u5n_A E3 ubiquitin-protein li 68.9 1.9 6.6E-05 43.5 2.1 31 581-614 7-37 (207)
102 1wev_A Riken cDNA 1110020M19; 68.0 2.4 8.1E-05 37.7 2.2 32 581-614 16-51 (88)
103 3lqh_A Histone-lysine N-methyl 67.7 2.4 8.4E-05 42.6 2.5 30 582-613 3-38 (183)
104 3uej_A NPKC-delta, protein kin 67.7 2.9 0.0001 34.7 2.6 34 459-492 20-54 (65)
105 2e6s_A E3 ubiquitin-protein li 67.2 2.4 8.1E-05 37.0 2.0 30 583-614 28-59 (77)
106 3kqi_A GRC5, PHD finger protei 65.9 1.6 5.6E-05 37.4 0.7 28 584-613 12-42 (75)
107 2l43_A N-teminal domain from h 65.6 2.6 9E-05 37.5 2.0 33 580-614 24-60 (88)
108 1y8f_A UNC-13 homolog A, MUNC1 65.3 3.9 0.00013 34.2 2.9 34 459-492 24-58 (66)
109 2fnf_X Putative RAS effector N 64.3 3.8 0.00013 35.1 2.8 32 459-492 35-66 (72)
110 2eli_A Protein kinase C alpha 63.9 6.3 0.00021 34.6 4.1 35 458-492 27-62 (85)
111 2e6r_A Jumonji/ARID domain-con 63.6 2.8 9.7E-05 37.5 1.9 49 581-639 16-66 (92)
112 2ro1_A Transcription intermedi 62.6 2.7 9.4E-05 42.0 1.8 29 582-613 3-31 (189)
113 1wil_A KIAA1045 protein; ring 61.8 2 6.7E-05 38.7 0.5 36 581-618 15-51 (89)
114 2csz_A Synaptotagmin-like prot 61.4 3.7 0.00013 36.1 2.1 50 457-508 23-73 (76)
115 1x4i_A Inhibitor of growth pro 59.9 4.3 0.00015 34.7 2.2 32 582-614 7-40 (70)
116 3pfq_A PKC-B, PKC-beta, protei 59.9 3.2 0.00011 48.5 1.9 33 459-491 48-81 (674)
117 2db6_A SH3 and cysteine rich d 58.8 2.3 7.8E-05 36.5 0.3 34 459-492 28-62 (74)
118 2lbm_A Transcriptional regulat 57.5 3.6 0.00012 40.0 1.5 31 581-614 63-93 (142)
119 1kbe_A Kinase suppressor of RA 51.6 8.3 0.00028 31.0 2.5 29 460-491 15-43 (49)
120 1rfh_A RAS association (ralgds 50.4 4.2 0.00014 33.4 0.6 32 459-492 22-53 (59)
121 3ask_A E3 ubiquitin-protein li 48.8 6.4 0.00022 41.0 1.8 31 582-614 175-207 (226)
122 2a20_A Regulating synaptic mem 48.7 13 0.00045 31.4 3.3 51 457-507 7-59 (62)
123 3rsn_A SET1/ASH2 histone methy 48.0 12 0.00039 37.8 3.4 48 585-638 8-58 (177)
124 3shb_A E3 ubiquitin-protein li 47.5 7.6 0.00026 33.9 1.8 30 583-614 28-59 (77)
125 2yqk_A Arginine-glutamic acid 46.6 11 0.00037 31.5 2.5 46 295-350 8-55 (63)
126 2vrw_B P95VAV, VAV1, proto-onc 46.0 14 0.00048 40.2 4.1 37 456-492 354-391 (406)
127 3kv4_A PHD finger protein 8; e 45.3 5.5 0.00019 45.2 0.7 29 582-612 5-36 (447)
128 3ql9_A Transcriptional regulat 45.0 7.9 0.00027 37.1 1.7 31 581-614 57-87 (129)
129 1iym_A EL5; ring-H2 finger, ub 43.7 17 0.00058 28.0 3.2 33 458-490 4-36 (55)
130 2d8s_A Cellular modulator of i 42.2 20 0.00068 31.1 3.6 51 458-508 14-67 (80)
131 3kv5_D JMJC domain-containing 41.7 6.7 0.00023 44.9 0.7 29 583-613 38-69 (488)
132 1v5n_A PDI-like hypothetical p 41.6 11 0.00037 33.6 1.9 32 460-493 48-79 (89)
133 3ky9_A Proto-oncogene VAV; cal 41.4 18 0.00062 41.6 4.3 37 457-493 527-564 (587)
134 3nw0_A Non-structural maintena 41.1 11 0.00037 39.2 2.1 46 459-507 180-225 (238)
135 2row_A RHO-associated protein 40.8 9.5 0.00033 34.0 1.4 33 459-491 35-70 (84)
136 2ct0_A Non-SMC element 1 homol 39.9 11 0.00038 32.6 1.7 46 459-507 15-60 (74)
137 2ct0_A Non-SMC element 1 homol 39.5 13 0.00045 32.1 2.1 32 580-613 14-45 (74)
138 1weo_A Cellulose synthase, cat 34.8 4.8 0.00017 36.5 -1.5 48 459-507 16-66 (93)
139 1r79_A Diacylglycerol kinase, 34.2 20 0.00069 31.8 2.4 34 459-492 38-73 (84)
140 2crg_A Metastasis associated p 32.4 17 0.00059 30.9 1.6 46 296-351 8-55 (70)
141 2ku7_A MLL1 PHD3-CYP33 RRM chi 32.0 8.5 0.00029 34.9 -0.4 34 475-508 2-44 (140)
142 3rsn_A SET1/ASH2 histone methy 32.0 33 0.0011 34.5 3.8 71 464-558 9-81 (177)
143 1vyx_A ORF K3, K3RING; zinc-bi 31.9 2.8 9.5E-05 34.7 -3.3 50 457-507 4-55 (60)
144 2ecm_A Ring finger and CHY zin 31.6 34 0.0012 26.1 3.1 34 458-491 4-37 (55)
145 1weq_A PHD finger protein 7; s 31.2 33 0.0011 30.7 3.3 35 473-508 44-79 (85)
146 1v5n_A PDI-like hypothetical p 28.5 23 0.00079 31.4 1.8 60 550-614 19-79 (89)
147 2lq6_A Bromodomain-containing 23.8 45 0.0015 29.5 2.8 30 459-490 17-48 (87)
148 2ku7_A MLL1 PHD3-CYP33 RRM chi 22.4 19 0.00066 32.5 0.1 16 594-611 2-17 (140)
149 3cxl_A N-chimerin; SH2, RHO-GA 22.2 38 0.0013 37.9 2.5 33 459-491 220-253 (463)
150 3nw0_A Non-structural maintena 22.1 29 0.001 35.9 1.5 31 581-613 180-210 (238)
151 1x4j_A Ring finger protein 38; 21.6 44 0.0015 27.5 2.2 34 457-491 21-54 (75)
152 3pfq_A PKC-B, PKC-beta, protei 20.9 43 0.0015 39.0 2.7 35 458-492 112-147 (674)
153 3a1b_A DNA (cytosine-5)-methyl 20.0 22 0.00074 35.3 -0.1 45 459-507 79-133 (159)
No 1
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.19 E-value=4.8e-12 Score=113.43 Aligned_cols=64 Identities=34% Similarity=0.785 Sum_probs=53.6
Q ss_pred ccCCC--CcccccccCC-CceeeecCCCCCCccccccccccCCceEEEeeC--------CCceeeeEeCCCCChh
Q 002891 576 AFPKG--IDVCCICRHK-HGICIKCNYGNCQTTFHPTCARSAGFYLNVKST--------GGNFQHKAYCEKHSLE 639 (870)
Q Consensus 576 sI~k~--k~~CsIC~~~-~GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~--------~g~i~~kaYC~kHs~~ 639 (870)
+|++. +++|++|+++ .||||+|+.++|.++||++||+.+|++|++... .+.+++.+||++|+|.
T Consensus 10 NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~~~~~~~~~v~~~~yC~~HsPp 84 (87)
T 2lq6_A 10 NIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPP 84 (87)
T ss_dssp CCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEECTTTSCEEEEEEEECCGGGSSS
T ss_pred CCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeecccccccCCccccceECeECcCCCCc
Confidence 46665 6899999987 599999999999999999999999999987531 1234678999999984
No 2
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.97 E-value=2.5e-10 Score=98.76 Aligned_cols=55 Identities=33% Similarity=0.733 Sum_probs=48.2
Q ss_pred CCCCCcCcccCCCCC-CCCCEEEecCCCceeccccccCCCCCCCceecccchhhcc
Q 002891 456 KEHPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEELLS 510 (870)
Q Consensus 456 ke~~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~~s 510 (870)
..++..|.||++.+. ..|.||+||+|+.+||+.|||+..+|+|.|+|..|....+
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~~~ 68 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRA 68 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCcCc
Confidence 345678999998763 5789999999999999999999999999999999998643
No 3
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.83 E-value=1.2e-09 Score=98.06 Aligned_cols=54 Identities=33% Similarity=0.740 Sum_probs=47.4
Q ss_pred CCCCCcCcccCCCCC-CCCCEEEecCCCceeccccccCCCCCCCceecccchhhc
Q 002891 456 KEHPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEELL 509 (870)
Q Consensus 456 ke~~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~~ 509 (870)
.+++..|.||.+.+. ..|.||+||+|..+||+.|||+..+|+|.|+|..|....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHT
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCcc
Confidence 346689999998653 568999999999999999999998999999999999864
No 4
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.68 E-value=5.5e-09 Score=93.63 Aligned_cols=58 Identities=26% Similarity=0.639 Sum_probs=48.1
Q ss_pred CCCCCCCcCcccCCCCC-CCCCEEEecCCCceeccccccCCC------CCCCceecccchhhccC
Q 002891 454 FSKEHPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAK------ESTGPWYCELCEELLSS 511 (870)
Q Consensus 454 ~ske~~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~------ipeg~WLCd~C~~~~s~ 511 (870)
+..+++..|.||...+. ..|.||+||+|..++|+.||+.+. +|.+.|+|..|......
T Consensus 11 ~~~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~~ 75 (88)
T 1wev_A 11 FAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMKR 75 (88)
T ss_dssp CHHHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHCC
T ss_pred ccCCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhhh
Confidence 33456789999998764 368999999999999999999752 68999999999986543
No 5
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.65 E-value=1.5e-08 Score=85.40 Aligned_cols=51 Identities=25% Similarity=0.567 Sum_probs=43.6
Q ss_pred CCCcCcccCCCCC-CCCCEEEecCCCceeccccccCCC----C-CCCceecccchhh
Q 002891 458 HPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAK----E-STGPWYCELCEEL 508 (870)
Q Consensus 458 ~~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~----i-peg~WLCd~C~~~ 508 (870)
++..|.||...+. ..+.||+|++|..+||+.||++.. + |++.|+|..|...
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 4578999998653 468999999999999999999853 3 7899999999874
No 6
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.44 E-value=2.5e-07 Score=86.00 Aligned_cols=76 Identities=26% Similarity=0.468 Sum_probs=61.1
Q ss_pred CCCCcCcccCCCCCCCCCEEEec--CCCceeccccccCCCCCCCceecccchhhccCCCCCCCCCCccCCCCcccccccC
Q 002891 457 EHPRSCDICRRSETILNPILICS--GCKVAVHLDCYRNAKESTGPWYCELCEELLSSRSSGAPSVNFWEKPYFVAECSLC 534 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd--~C~IaVHq~CYGi~~ipeg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~~~C~LC 534 (870)
+++..|.||.+ +++||.|| .|...+|..|+|+..+|.|.|+|..|.-..-.+ .. .+.|.+|
T Consensus 13 ~~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C~~C~k-----------~~--~~~C~~C 75 (107)
T 4gne_A 13 MHEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSS-----------AA--VSFCEFC 75 (107)
T ss_dssp SSCSSCTTTCC----CSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBCTTTCS-----------BC--CEECSSS
T ss_pred CCCCCCCcCCC----CCcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCCCcCCC-----------CC--CcCcCCC
Confidence 45678999995 46899999 899999999999999999999999886432111 11 5789999
Q ss_pred CC------CCCCcccccCCce
Q 002891 535 GG------TTGAFRKSANGQW 549 (870)
Q Consensus 535 p~------~gGALK~Tsdg~W 549 (870)
+. ..|+|+.+..+.|
T Consensus 76 p~sfC~~c~~g~l~~~~~~~~ 96 (107)
T 4gne_A 76 PHSFCKDHEKGALVPSALEGR 96 (107)
T ss_dssp SCEECTTTCTTSCEECTTTTC
T ss_pred CcchhhhccCCcceecCCCCc
Confidence 96 4688888888788
No 7
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.41 E-value=2.2e-07 Score=78.84 Aligned_cols=52 Identities=27% Similarity=0.756 Sum_probs=44.1
Q ss_pred CCCCCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhhcc
Q 002891 455 SKEHPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEELLS 510 (870)
Q Consensus 455 ske~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~~s 510 (870)
...++..|.||.+ .+.||.||+|..++|..|++ +..+|.+.|+|..|.....
T Consensus 4 ~~~~~~~C~vC~~----~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 57 (66)
T 1xwh_A 4 AQKNEDECAVCRD----GGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATV 57 (66)
T ss_dssp CCSCCCSBSSSSC----CSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCC
T ss_pred CCCCCCCCccCCC----CCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccc
Confidence 3456789999997 36899999999999999999 4567899999999997543
No 8
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.6e-07 Score=75.95 Aligned_cols=49 Identities=35% Similarity=0.897 Sum_probs=42.1
Q ss_pred CCCCCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchh
Q 002891 455 SKEHPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEE 507 (870)
Q Consensus 455 ske~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~ 507 (870)
...++..|.||.+. +.||.|+.|..++|..|++ +..+|.+.|+|..|..
T Consensus 5 ~~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 5 SSGHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSSCCSCSSSCCS----SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred cCCCCCCCccCCCC----CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 44566889999973 6899999999999999999 4567899999999974
No 9
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.32 E-value=2.3e-07 Score=74.59 Aligned_cols=46 Identities=30% Similarity=0.873 Sum_probs=39.9
Q ss_pred cCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchh
Q 002891 461 SCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEE 507 (870)
Q Consensus 461 ~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~ 507 (870)
.|.||+..+. .+.||.||+|...+|..|++ +..+|.+.|+|..|..
T Consensus 2 ~C~vC~~~~~-~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGE-DDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCC-CCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 6999998643 57899999999999999995 5678899999999975
No 10
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.31 E-value=3.2e-07 Score=76.86 Aligned_cols=49 Identities=24% Similarity=0.716 Sum_probs=42.0
Q ss_pred CCCCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhh
Q 002891 456 KEHPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEEL 508 (870)
Q Consensus 456 ke~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~ 508 (870)
..++..|.||.+ .+.||.||.|..++|..|++ +..+|.+.|+|..|...
T Consensus 6 d~~~~~C~vC~~----~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKD----GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCC----CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCC----CCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 345678999987 46899999999999999999 45678999999999863
No 11
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.27 E-value=6.4e-07 Score=75.05 Aligned_cols=51 Identities=29% Similarity=0.851 Sum_probs=43.4
Q ss_pred CCCCCCCcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCceecccchhh
Q 002891 454 FSKEHPRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEEL 508 (870)
Q Consensus 454 ~ske~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~WLCd~C~~~ 508 (870)
...+++..|.||.+ .+.||.||.|..++|..|++. ..+|.+.|+|..|...
T Consensus 6 ~~~~~~~~C~vC~~----~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 6 YETDHQDYCEVCQQ----GGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCCCSSCTTTSC----CSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred ccCCCCCCCccCCC----CCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 34456789999997 368999999999999999998 4578999999999863
No 12
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.25 E-value=6e-07 Score=74.71 Aligned_cols=48 Identities=31% Similarity=0.883 Sum_probs=41.8
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~~ 509 (870)
++..|.||++ .+.||.||+|...+|..|++ +..+|.+.|+|..|....
T Consensus 4 ~~~~C~vC~~----~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRK----SGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCC----CSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCC----CCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 4578999997 36899999999999999999 456789999999998754
No 13
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=6.2e-07 Score=81.01 Aligned_cols=51 Identities=25% Similarity=0.656 Sum_probs=43.5
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhh
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEEL 508 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~ 508 (870)
.++..|.||..... .+.||.||+|...+|..|++ +..+|.+.|+|..|...
T Consensus 14 ~~~~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 14 IDSYICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 45578999998542 57899999999999999999 45688999999999875
No 14
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.18 E-value=9.4e-07 Score=75.46 Aligned_cols=46 Identities=22% Similarity=0.508 Sum_probs=39.7
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCceecccchhh
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEEL 508 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~WLCd~C~~~ 508 (870)
...|.||++ .+.||.||.|..++|..|+.. ..+|.+.|+|..|...
T Consensus 12 ~~~C~vC~~----~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGD----GTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSC----CTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCC----CCeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 467999986 467999999999999999964 4688999999999864
No 15
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.17 E-value=2.9e-06 Score=78.26 Aligned_cols=94 Identities=22% Similarity=0.462 Sum_probs=67.5
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCC--CCCceecccchhhccCCCCCCCCCCccCCCCcccccccC
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE--STGPWYCELCEELLSSRSSGAPSVNFWEKPYFVAECSLC 534 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~i--peg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~~~C~LC 534 (870)
.++..|.||.+.. +.+.||.|+.|..++|..|.++... +.+.|+|..|. .|.+|
T Consensus 5 ~~~~~C~~C~~~g-~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~-----------------------~C~~C 60 (111)
T 2ysm_A 5 SSGANCAVCDSPG-DLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK-----------------------VCQNC 60 (111)
T ss_dssp CCCSCBTTTCCCC-CTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC-----------------------CCTTT
T ss_pred CCCCCCcCCCCCC-CCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC-----------------------ccccc
Confidence 3567899999853 2467899999999999999998654 47899999985 26677
Q ss_pred CCCCC---CcccccCCceeeeeccccccceeeccCCcCccccccccCCCCcccccccC
Q 002891 535 GGTTG---AFRKSANGQWVHAFCAEWVFESTFRRGQVNPVAGMEAFPKGIDVCCICRH 589 (870)
Q Consensus 535 p~~gG---ALK~Tsdg~WVHVvCALWiPEv~f~n~~mepVeGIesI~k~k~~CsIC~~ 589 (870)
...+. .+....-..|.|+.|.-- | +..++...+.|..|..
T Consensus 61 ~~~~~~~~ll~Cd~C~~~yH~~Cl~p------------p---l~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 61 KQSGEDSKMLVCDTCDKGYHTFCLQP------------V---MKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCCSCCTTEEECSSSCCEEEGGGSSS------------C---CSSCCSSCCCCHHHHC
T ss_pred CccCCCCCeeECCCCCcHHhHHhcCC------------c---cccCCCCCcCCcCCcC
Confidence 76543 333444568999999531 1 2345556788887764
No 16
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.14 E-value=1.7e-06 Score=77.94 Aligned_cols=51 Identities=25% Similarity=0.770 Sum_probs=43.9
Q ss_pred CCCCCCCcCcccCCCCCCCCCEEEecCCCceeccccc--cCCCCCCCceecccchhh
Q 002891 454 FSKEHPRSCDICRRSETILNPILICSGCKVAVHLDCY--RNAKESTGPWYCELCEEL 508 (870)
Q Consensus 454 ~ske~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CY--Gi~~ipeg~WLCd~C~~~ 508 (870)
...+++..|.||++. +.||.||.|..++|..|+ ++..+|.|.|+|..|...
T Consensus 20 ~~d~n~~~C~vC~~~----g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 20 TLDDSATICRVCQKP----GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSSSCCSSSCSS----SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred ccCCCCCcCcCcCCC----CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 455677899999973 579999999999999999 556789999999999864
No 17
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.13 E-value=2.1e-06 Score=79.66 Aligned_cols=92 Identities=24% Similarity=0.615 Sum_probs=66.2
Q ss_pred CcCcccCCCCC-----CCCCEEEecCCCceeccccccCC-----CCCCCceecccchhhccCCCCCCCCCCccCCCCccc
Q 002891 460 RSCDICRRSET-----ILNPILICSGCKVAVHLDCYRNA-----KESTGPWYCELCEELLSSRSSGAPSVNFWEKPYFVA 529 (870)
Q Consensus 460 ~~CsVC~d~E~-----~~N~IV~Cd~C~IaVHq~CYGi~-----~ipeg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~~ 529 (870)
..|.+|...+. ..+.||.|++|+..+|..|++.. .++.+.|+|..|+.
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~---------------------- 63 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKT---------------------- 63 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCC----------------------
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCCc----------------------
Confidence 57999987542 34689999999999999999863 35688999999963
Q ss_pred ccccCCCCC---CC-cccccCCceeeeeccccccceeeccCCcCccccccccCCCCcccccccC
Q 002891 530 ECSLCGGTT---GA-FRKSANGQWVHAFCAEWVFESTFRRGQVNPVAGMEAFPKGIDVCCICRH 589 (870)
Q Consensus 530 ~C~LCp~~g---GA-LK~Tsdg~WVHVvCALWiPEv~f~n~~mepVeGIesI~k~k~~CsIC~~ 589 (870)
|.+|...+ +. |....-..++|+.|.. | .+..++.+.+.|..|..
T Consensus 64 -C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~-------------p--~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 64 -CSSCRDQGKNADNMLFCDSCDRGFHMECCD-------------P--PLTRMPKGMWICQICRP 111 (112)
T ss_dssp -BTTTCCCCCTTCCCEECTTTCCEECGGGCS-------------S--CCSSCCSSCCCCTTTSC
T ss_pred -cccccCcCCCccceEEcCCCCCeeecccCC-------------C--CCCCCCCCCeECCCCCC
Confidence 66676543 22 3333445899999943 1 23356677788988874
No 18
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.99 E-value=4.4e-06 Score=73.37 Aligned_cols=46 Identities=35% Similarity=0.828 Sum_probs=39.9
Q ss_pred cCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCC-ceecccchh
Q 002891 461 SCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTG-PWYCELCEE 507 (870)
Q Consensus 461 ~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg-~WLCd~C~~ 507 (870)
.|.||...+. .+.||.||+|..++|..|++ +..+|.| .|+|..|..
T Consensus 28 ~C~vC~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHE-PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCC-STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCC-CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 7999997543 68999999999999999999 4568888 999999964
No 19
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.97 E-value=4.6e-06 Score=77.69 Aligned_cols=92 Identities=24% Similarity=0.573 Sum_probs=64.9
Q ss_pred CcCcccCCCCC------CCCCEEEecCCCceeccccccCC-----CCCCCceecccchhhccCCCCCCCCCCccCCCCcc
Q 002891 460 RSCDICRRSET------ILNPILICSGCKVAVHLDCYRNA-----KESTGPWYCELCEELLSSRSSGAPSVNFWEKPYFV 528 (870)
Q Consensus 460 ~~CsVC~d~E~------~~N~IV~Cd~C~IaVHq~CYGi~-----~ipeg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~ 528 (870)
..|.+|...+. ....||+|+.|..++|..|.+.. .++.+.|.|..|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~---------------------- 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK---------------------- 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC----------------------
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC----------------------
Confidence 46999987541 24689999999999999999975 3567899999995
Q ss_pred cccccCCCC--CC-CcccccCCceeeeeccccccceeeccCCcCccccccccCCCCcccccccC
Q 002891 529 AECSLCGGT--TG-AFRKSANGQWVHAFCAEWVFESTFRRGQVNPVAGMEAFPKGIDVCCICRH 589 (870)
Q Consensus 529 ~~C~LCp~~--gG-ALK~Tsdg~WVHVvCALWiPEv~f~n~~mepVeGIesI~k~k~~CsIC~~ 589 (870)
.|.+|... ++ .+..-.-..|+|+.|.-- | +..++.+.+.|..|..
T Consensus 60 -~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~p------------p---l~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 60 -SCILCGTSENDDQLLFCDDCDRGYHMYCLNP------------P---VAEPPEGSWSCHLCWE 107 (114)
T ss_dssp -CCTTTTCCTTTTTEEECSSSCCEEETTTSSS------------C---CSSCCSSCCCCHHHHH
T ss_pred -ccCcccccCCCCceEEcCCCCccccccccCC------------C---ccCCCCCCeECccccc
Confidence 26667653 22 333334458999999531 1 2345666788888753
No 20
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=97.89 E-value=1e-05 Score=69.90 Aligned_cols=49 Identities=22% Similarity=0.743 Sum_probs=41.2
Q ss_pred CCCcCcccCCCCCCCCCEEEecC--CC-ceeccccccCCCCCCCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSG--CK-VAVHLDCYRNAKESTGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~--C~-IaVHq~CYGi~~ipeg~WLCd~C~~~~ 509 (870)
+..+| ||++.+. +.||.||+ |. -.+|..|+|+...|.+.|+|..|....
T Consensus 15 ~~~~C-~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSC--SSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCC--CCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccc
Confidence 45677 8998653 57999999 77 489999999999999999999998643
No 21
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=97.89 E-value=6.2e-06 Score=71.04 Aligned_cols=46 Identities=26% Similarity=0.834 Sum_probs=39.2
Q ss_pred cCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCC-ceecccchh
Q 002891 461 SCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTG-PWYCELCEE 507 (870)
Q Consensus 461 ~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg-~WLCd~C~~ 507 (870)
.|.||+..+. .+.||.||+|..++|..|++ +..+|.| .|+|..|..
T Consensus 20 ~C~~C~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSC-GGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCC-CCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 6778887542 57899999999999999999 5567888 999999974
No 22
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.84 E-value=8.9e-06 Score=75.77 Aligned_cols=51 Identities=37% Similarity=0.845 Sum_probs=42.7
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhhcc
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEELLS 510 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~~s 510 (870)
...|.||+..+. .+.||.||+|..++|..|++ +..+|.|.|+|..|.....
T Consensus 58 C~~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~~ 110 (114)
T 2kwj_A 58 CKSCILCGTSEN-DDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELLK 110 (114)
T ss_dssp GCCCTTTTCCTT-TTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHHH
T ss_pred cCccCcccccCC-CCceEEcCCCCccccccccCCCccCCCCCCeECccccchhh
Confidence 347889987543 57899999999999999999 4568899999999987643
No 23
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=97.83 E-value=8.8e-06 Score=71.51 Aligned_cols=46 Identities=26% Similarity=0.820 Sum_probs=38.0
Q ss_pred cCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCc-eecccchh
Q 002891 461 SCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGP-WYCELCEE 507 (870)
Q Consensus 461 ~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~-WLCd~C~~ 507 (870)
.|.||+..+ ..+.||.||+|..++|..|++. ..+|.+. |+|..|.+
T Consensus 28 ~C~vC~~~~-d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCC-CCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 577787654 2578999999999999999994 5678888 99999975
No 24
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=97.76 E-value=1.5e-05 Score=79.50 Aligned_cols=48 Identities=27% Similarity=0.775 Sum_probs=40.8
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~WLCd~C~~~~ 509 (870)
++..|.||.+ ++.+|.||+|..++|..|.+. ..+|.|.|+|..|....
T Consensus 3 ~~~~C~~C~~----~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQN----GGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCC----CSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCC----CCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 4578999997 367999999999999999954 46789999999998753
No 25
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=97.76 E-value=1.4e-05 Score=72.23 Aligned_cols=51 Identities=25% Similarity=0.716 Sum_probs=42.0
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCC---ceeccccccCCCCCCCceeccc-chhhcc
Q 002891 457 EHPRSCDICRRSETILNPILICSGCK---VAVHLDCYRNAKESTGPWYCEL-CEELLS 510 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~---IaVHq~CYGi~~ipeg~WLCd~-C~~~~s 510 (870)
+...+| ||...+. +.||.||+|+ --+|..|+|+...|.+.|+|.. |....+
T Consensus 24 ~~~~yC-iC~~~~~--g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~~~k 78 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY--GPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKEIAN 78 (90)
T ss_dssp CCSCCS-TTTCCCS--SSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHHHHH
T ss_pred CCCcEE-EeCCCCC--CCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcchhh
Confidence 345677 9998553 4799999977 7899999999999999999999 986543
No 26
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=97.75 E-value=9.4e-06 Score=67.88 Aligned_cols=47 Identities=23% Similarity=0.822 Sum_probs=39.3
Q ss_pred CCCcCcccCCCCCCCCCEEEecC--CC-ceeccccccCCCCCCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSG--CK-VAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~--C~-IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
+...| ||++.+ .+.||.||+ |. -.+|..|+|+..+|.+.|+|..|..
T Consensus 9 e~~~C-~C~~~~--~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVS--YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcC--CCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccC
Confidence 34566 999865 367999999 55 6899999999999999999999975
No 27
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=97.75 E-value=1.3e-05 Score=69.17 Aligned_cols=53 Identities=19% Similarity=0.562 Sum_probs=43.3
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCC--CCCceecccchhhcc
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE--STGPWYCELCEELLS 510 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~i--peg~WLCd~C~~~~s 510 (870)
++...|.||...+. +..+|.||+|...+|..|.|+... +.+.|+|..|.....
T Consensus 16 ~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 16 NQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp CEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34568999998653 457999999999999999998754 358999999988643
No 28
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=97.73 E-value=1.6e-05 Score=80.83 Aligned_cols=49 Identities=24% Similarity=0.710 Sum_probs=41.2
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCceecccchhhc
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEELL 509 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~WLCd~C~~~~ 509 (870)
+++..|.||.+ ++.+|.||+|..++|..|++. ..+|.|.|+|..|....
T Consensus 5 ~~~~~C~~C~~----~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 5 PNEDWCAVCQN----GGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SSCSSBTTTCC----CEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC----CCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 35678999987 356999999999999999964 46789999999998753
No 29
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=97.68 E-value=1.4e-05 Score=66.71 Aligned_cols=47 Identities=23% Similarity=0.810 Sum_probs=39.7
Q ss_pred CCCcCcccCCCCCCCCCEEEecC--CC-ceeccccccCCCCCCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSG--CK-VAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~--C~-IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
+...| ||++.+ .+.||.||+ |. -.+|..|.|+...|.+.|+|..|..
T Consensus 8 e~~yC-~C~~~~--~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYC-LCHQVS--YGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCcEE-ECCCCC--CCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 34567 999865 357999999 77 4999999999999999999999975
No 30
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.67 E-value=2.6e-05 Score=72.38 Aligned_cols=50 Identities=24% Similarity=0.806 Sum_probs=41.2
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~ 507 (870)
+...|.||++...+.+.||.|+.|..++|..|+. +..+|++.|+|..|..
T Consensus 60 ~C~~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 60 ECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp TTCCBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred cCCccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 3457999987543457899999999999999995 4568899999999963
No 31
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.62 E-value=3.2e-05 Score=70.03 Aligned_cols=50 Identities=22% Similarity=0.734 Sum_probs=41.3
Q ss_pred CCCCcCcccCCCCCCCCCEEEecC--CC-ceeccccccCCCCCCCceecccchhhc
Q 002891 457 EHPRSCDICRRSETILNPILICSG--CK-VAVHLDCYRNAKESTGPWYCELCEELL 509 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~--C~-IaVHq~CYGi~~ipeg~WLCd~C~~~~ 509 (870)
+...+| ||++.+. +.||.||+ |. --+|..|.|+...|.+.|+|..|....
T Consensus 34 ~e~~yC-iC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 34 NEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCBCS-TTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred CCCcEE-ECCCCCC--CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 345677 9998653 57999999 66 579999999999899999999998743
No 32
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=97.60 E-value=2.2e-05 Score=66.17 Aligned_cols=47 Identities=23% Similarity=0.716 Sum_probs=39.6
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCC---ceeccccccCCCCCCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSGCK---VAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~---IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
+...| ||++.+. +.||.||+|+ --+|..|.|+...|.+.|+|..|..
T Consensus 10 e~~yC-~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYC-LCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHT
T ss_pred CCcEE-ECCCCCC--CCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCccc
Confidence 34667 9998643 5799999955 7999999999988999999999975
No 33
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=97.51 E-value=3.4e-05 Score=77.69 Aligned_cols=46 Identities=28% Similarity=0.832 Sum_probs=39.6
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceecccccc--CCCCCCCceecccchhh
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYR--NAKESTGPWYCELCEEL 508 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG--i~~ipeg~WLCd~C~~~ 508 (870)
+..|.||++ ++.+|.||+|..++|..|.. +..+|.|.|+|..|...
T Consensus 2 ~~~C~~C~~----~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQK----PGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCC----CSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCC----CCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 357999997 35799999999999999994 56688999999999864
No 34
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=97.44 E-value=6.6e-05 Score=77.96 Aligned_cols=47 Identities=26% Similarity=0.815 Sum_probs=36.1
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCC-ceecccchh
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTG-PWYCELCEE 507 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg-~WLCd~C~~ 507 (870)
..|.||+..+. .+.||.||+|..++|..|.+. ..+|.| .|+|..|..
T Consensus 175 c~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 37999987543 578999999999999999994 467888 999999975
No 35
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.33 E-value=0.00012 Score=67.35 Aligned_cols=49 Identities=24% Similarity=0.633 Sum_probs=40.6
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccC--CCCCCCceecccchhh
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRN--AKESTGPWYCELCEEL 508 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi--~~ipeg~WLCd~C~~~ 508 (870)
-..|.||+.... .+.||.|+.|..++|..|++. ..+|.+.|+|..|..-
T Consensus 54 C~~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 54 CKVCQNCKQSGE-DSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp TCCCTTTCCCSC-CTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred CCcccccCccCC-CCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 447888987543 468999999999999999984 4578999999999863
No 36
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=97.32 E-value=0.00023 Score=64.85 Aligned_cols=45 Identities=27% Similarity=0.693 Sum_probs=36.6
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccCCC--CCCCceecccchh
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAK--ESTGPWYCELCEE 507 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~--ipeg~WLCd~C~~ 507 (870)
..| ||+..+. .+.||.|+.|...+|..|+|+.. +| ..|+|..|..
T Consensus 29 vrC-iC~~~~~-~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~~ 75 (98)
T 2lv9_A 29 TRC-ICGFTHD-DGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQP 75 (98)
T ss_dssp CCC-TTSCCSC-SSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTSS
T ss_pred EEe-ECCCccC-CCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCcC
Confidence 456 9987543 56899999999999999999863 34 4799999974
No 37
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.30 E-value=0.00027 Score=59.11 Aligned_cols=53 Identities=17% Similarity=0.396 Sum_probs=43.2
Q ss_pred CCCCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCC---CCceecccchhh
Q 002891 456 KEHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKES---TGPWYCELCEEL 508 (870)
Q Consensus 456 ke~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip---eg~WLCd~C~~~ 508 (870)
.++..+|.+|.........+|.|+.|..=+|..|.|+...+ ...|+|..|...
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 34568899999865445679999999999999999997543 368999999864
No 38
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.20 E-value=0.00014 Score=62.64 Aligned_cols=48 Identities=23% Similarity=0.663 Sum_probs=40.3
Q ss_pred CCcCcccCCCCCCCCCEEEecCCC---ceeccccccCCCCCCCceecccchhhc
Q 002891 459 PRSCDICRRSETILNPILICSGCK---VAVHLDCYRNAKESTGPWYCELCEELL 509 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~---IaVHq~CYGi~~ipeg~WLCd~C~~~~ 509 (870)
..+| +|...+ .+.||.||+|+ .-+|..|.|+...|.+.|+|..|....
T Consensus 6 ~~yC-~C~~~~--~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~~ 56 (70)
T 1x4i_A 6 SGYC-ICNQVS--YGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAAM 56 (70)
T ss_dssp CCCS-TTSCCC--CSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHHH
T ss_pred CeEE-EcCCCC--CCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCccc
Confidence 3566 698864 35899999985 789999999998899999999998754
No 39
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.97 E-value=0.00061 Score=58.52 Aligned_cols=51 Identities=25% Similarity=0.503 Sum_probs=40.7
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCC--CCCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE--STGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~i--peg~WLCd~C~~~~ 509 (870)
....| ||+..+..+..+|.|+.|..=+|..|.|+... ....|+|..|....
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 44678 89986543457999999999999999999753 24789999998753
No 40
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=96.92 E-value=0.00082 Score=57.57 Aligned_cols=48 Identities=23% Similarity=0.656 Sum_probs=39.2
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCC-CCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE-STGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~i-peg~WLCd~C~~ 507 (870)
+...| ||+..+. +..+|.|+.|..=+|..|.|+... ..+.|+|..|..
T Consensus 18 ~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 45678 9998653 567999999999999999999753 246899999975
No 41
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=96.91 E-value=0.00069 Score=59.15 Aligned_cols=50 Identities=24% Similarity=0.637 Sum_probs=40.9
Q ss_pred CCCcCcccCCCCCCCCCEEEec--CCCceeccccccCCCCC-------CCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICS--GCKVAVHLDCYRNAKES-------TGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd--~C~IaVHq~CYGi~~ip-------eg~WLCd~C~~~~ 509 (870)
....| ||+..+. ...+|.|+ .|..=+|..|+|+...+ ...|+|..|....
T Consensus 15 ~~~~C-iC~~~~~-~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLE-TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCC-CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCC-CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 45677 9998743 46899999 99999999999997654 2589999998753
No 42
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=96.88 E-value=0.00033 Score=59.56 Aligned_cols=49 Identities=22% Similarity=0.574 Sum_probs=40.6
Q ss_pred CCCcCcccCCCCCCCCCEEEec-CCCceeccccccCCC--------CCCCceecccch
Q 002891 458 HPRSCDICRRSETILNPILICS-GCKVAVHLDCYRNAK--------ESTGPWYCELCE 506 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd-~C~IaVHq~CYGi~~--------ipeg~WLCd~C~ 506 (870)
....|.+|.........+|.|| .|..=+|..|.|+.. .|.+.|+|+.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 3468999998755456899999 999999999999974 367899999996
No 43
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.71 E-value=0.00072 Score=58.49 Aligned_cols=50 Identities=24% Similarity=0.549 Sum_probs=40.3
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCC-------CCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKES-------TGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip-------eg~WLCd~C~~~~ 509 (870)
+..+| +|+.... +..+|.|+.|..=+|..|.|+...+ ...|+|..|....
T Consensus 15 ~~~~C-~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 15 NALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp TCCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCCEE-ECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 34667 9998653 4589999999999999999997532 4789999999754
No 44
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=96.56 E-value=0.00089 Score=58.46 Aligned_cols=51 Identities=24% Similarity=0.557 Sum_probs=40.7
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCC---CCceecccchhhc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKES---TGPWYCELCEELL 509 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip---eg~WLCd~C~~~~ 509 (870)
....| ||.........+|.|+.|..=+|..|.|+...+ ...|+|..|....
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 34566 999865445789999999999999999997532 3689999998753
No 45
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=96.40 E-value=0.0017 Score=59.96 Aligned_cols=50 Identities=24% Similarity=0.650 Sum_probs=41.9
Q ss_pred CcCcccCCCCCCCCCEEEec-CCCceeccccccCCC--------CCCCceecccchhhc
Q 002891 460 RSCDICRRSETILNPILICS-GCKVAVHLDCYRNAK--------ESTGPWYCELCEELL 509 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd-~C~IaVHq~CYGi~~--------ipeg~WLCd~C~~~~ 509 (870)
..|.+|.......+.+|.|+ .|.-=||..|.|+.. .+.+.|+|..|....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 57999998754456799998 999999999999974 366899999999753
No 46
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=96.37 E-value=0.00058 Score=67.14 Aligned_cols=51 Identities=20% Similarity=0.445 Sum_probs=41.2
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCC---CCCceecccchhh
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKE---STGPWYCELCEEL 508 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~i---peg~WLCd~C~~~ 508 (870)
++...| +|+........+|.|+.|..-+|..|.|+... ..+.|+|..|...
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 355788 99986444567999999999999999998643 3579999999875
No 47
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=96.31 E-value=0.0034 Score=53.43 Aligned_cols=48 Identities=29% Similarity=0.711 Sum_probs=37.3
Q ss_pred CCcCcccCCCCCCCCCEEEecC--CCceeccccccCCCCCC------Cceecccchhh
Q 002891 459 PRSCDICRRSETILNPILICSG--CKVAVHLDCYRNAKEST------GPWYCELCEEL 508 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~--C~IaVHq~CYGi~~ipe------g~WLCd~C~~~ 508 (870)
...| ||+..+. .+.+|.|++ |..=+|..|+|+...+. ..|+|..|+..
T Consensus 10 ~v~C-~C~~~~~-~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 10 KVRC-ICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp EECC-TTCCCSC-CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CEEe-ECCCCcC-CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 3556 9987543 468999995 99999999999965432 36999999864
No 48
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=96.31 E-value=0.0015 Score=52.95 Aligned_cols=46 Identities=22% Similarity=0.439 Sum_probs=37.7
Q ss_pred cCcccCCCCCCCCCEEEec-CCCceeccccccCCCCC--CCceecccch
Q 002891 461 SCDICRRSETILNPILICS-GCKVAVHLDCYRNAKES--TGPWYCELCE 506 (870)
Q Consensus 461 ~CsVC~d~E~~~N~IV~Cd-~C~IaVHq~CYGi~~ip--eg~WLCd~C~ 506 (870)
.|.+|......+..+|.|+ .|..=+|..|.|+...+ ...|+|..|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 5889998765556799999 89999999999997543 3789999984
No 49
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=95.92 E-value=0.0052 Score=49.65 Aligned_cols=45 Identities=22% Similarity=0.632 Sum_probs=36.7
Q ss_pred CcccCCCCCCCCCEEEecCCCceeccccccCCCCC-CCceecccchh
Q 002891 462 CDICRRSETILNPILICSGCKVAVHLDCYRNAKES-TGPWYCELCEE 507 (870)
Q Consensus 462 CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip-eg~WLCd~C~~ 507 (870)
=+||+..+. +..+|.|+.|+.=+|..|.|+...+ .+.|+|..|..
T Consensus 6 ~C~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 6 TCFCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp CSTTCCBCT-TCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EEEeCCcCC-CCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 358987543 5689999999999999999997632 46899999974
No 50
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=95.59 E-value=0.004 Score=53.90 Aligned_cols=50 Identities=22% Similarity=0.443 Sum_probs=39.9
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccCCCCCC---Cceecccchhhc
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAKEST---GPWYCELCEELL 509 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipe---g~WLCd~C~~~~ 509 (870)
..-+||.........+|.|+.|..=+|..|.|+...+. ..|+|..|....
T Consensus 10 ~~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 10 PVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred eeEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 34559997543356899999999999999999986542 679999998753
No 51
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=95.33 E-value=0.0053 Score=59.73 Aligned_cols=46 Identities=22% Similarity=0.655 Sum_probs=39.3
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCCC---------CCCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAK---------ESTGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~---------ipeg~WLCd~C~~ 507 (870)
.+..|.||.+ ++.++.||.|..++|..|..... .|.++|.|..|..
T Consensus 62 ~~d~C~vC~~----GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 62 MDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp CBCSCSSSCC----CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCeecccCC----CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 4578999998 57899999999999999997432 3789999999975
No 52
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=94.12 E-value=0.01 Score=56.84 Aligned_cols=46 Identities=22% Similarity=0.631 Sum_probs=38.6
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccCC-------CC--CCCceecccchh
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRNA-------KE--STGPWYCELCEE 507 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~-------~i--peg~WLCd~C~~ 507 (870)
.+..|.||.+ +++++.||.|..++|..|.... .+ +.++|.|-.|..
T Consensus 56 ~~~~C~vC~d----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCC----CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCC----CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4468999997 5789999999999999999742 23 789999999965
No 53
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=93.87 E-value=0.014 Score=66.70 Aligned_cols=49 Identities=22% Similarity=0.489 Sum_probs=39.6
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccCCCCCC---Cceecccchhhc
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAKEST---GPWYCELCEELL 509 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipe---g~WLCd~C~~~~ 509 (870)
..| +|+........+|.|+.|..=+|..|.|+...+. +.|+|..|....
T Consensus 38 ~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 38 VYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp EET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 445 9998643357899999999999999999986542 679999999754
No 54
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=92.89 E-value=0.031 Score=56.32 Aligned_cols=49 Identities=22% Similarity=0.505 Sum_probs=36.2
Q ss_pred CCcCcccCCCCCCC---CCEEEecCCCceeccccccCCCC--------CC-Cceecccchh
Q 002891 459 PRSCDICRRSETIL---NPILICSGCKVAVHLDCYRNAKE--------ST-GPWYCELCEE 507 (870)
Q Consensus 459 ~~~CsVC~d~E~~~---N~IV~Cd~C~IaVHq~CYGi~~i--------pe-g~WLCd~C~~ 507 (870)
+..|.||...-..+ ..+|.||.|..=||..|-|+... |+ ..|+|..|..
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~ 62 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTE 62 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCC
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCC
Confidence 35799999754322 35999999999999999998631 21 3678887765
No 55
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=90.96 E-value=0.032 Score=63.15 Aligned_cols=51 Identities=22% Similarity=0.406 Sum_probs=41.0
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccCCCCC---CCceecccchhhcc
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRNAKES---TGPWYCELCEELLS 510 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip---eg~WLCd~C~~~~s 510 (870)
...|+|+.....+..+|.|+.|..=+|..|.|+...+ .+.|+|..|.....
T Consensus 5 ~~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 5 PVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp CEETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred CeEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccC
Confidence 4577999864446789999999999999999997543 26899999987643
No 56
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=88.48 E-value=0.2 Score=41.54 Aligned_cols=31 Identities=26% Similarity=0.657 Sum_probs=26.6
Q ss_pred CcccccccCC---CceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHK---HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...|.+|++. .+.+|+|. .|..+||..|+-.
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cvgl 39 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCD--LCEMWFHGKCVKI 39 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECS--SSCCEEETTTTTC
T ss_pred CCCCCCCCCccCCCCCEEEcc--CCCCCCCccccCc
Confidence 4679999986 57899999 9999999999844
No 57
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=88.03 E-value=0.19 Score=43.70 Aligned_cols=32 Identities=22% Similarity=0.491 Sum_probs=27.9
Q ss_pred CcccccccCC--CceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...| +|++. .|.+|+|....|..+||..|.-.
T Consensus 16 ~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi 49 (78)
T 1wew_A 16 KVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVIL 49 (78)
T ss_dssp CCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSC
T ss_pred CEEe-ECCCcCCCCCEEEECCccCCccccCEEEcc
Confidence 5678 89985 78999999999999999999854
No 58
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=87.33 E-value=0.26 Score=41.76 Aligned_cols=30 Identities=30% Similarity=0.629 Sum_probs=25.2
Q ss_pred CcccccccCC--CceeeecCCCCCCcccccccc
Q 002891 581 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCA 611 (870)
Q Consensus 581 k~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA 611 (870)
...| +|+.. .|.+|+|....|..+||..|.
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cv 41 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCV 41 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTS
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhC
Confidence 3566 79864 689999997679999999997
No 59
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=85.51 E-value=0.37 Score=41.41 Aligned_cols=30 Identities=33% Similarity=0.796 Sum_probs=25.0
Q ss_pred CcccccccCC--CceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...| +|++. .+.+|+|. .|..+||..|.-.
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cvgl 47 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCD--RCEEWFHGDCVGI 47 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECS--SSCCEEEHHHHSC
T ss_pred CCEE-ECCCccCCCCEEEeC--CCCCcEeCeEEcc
Confidence 4667 89986 46899999 8999999999843
No 60
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=84.90 E-value=0.51 Score=54.46 Aligned_cols=37 Identities=16% Similarity=0.375 Sum_probs=31.4
Q ss_pred CCEEEecCCCceeccccccCCCCC---CCceecccchhhc
Q 002891 473 NPILICSGCKVAVHLDCYRNAKES---TGPWYCELCEELL 509 (870)
Q Consensus 473 N~IV~Cd~C~IaVHq~CYGi~~ip---eg~WLCd~C~~~~ 509 (870)
..+|.||.|.-=+|..|.|+.... -+.|+|..|....
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCC
Confidence 469999999999999999997543 3689999999753
No 61
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=84.89 E-value=0.73 Score=41.67 Aligned_cols=32 Identities=28% Similarity=0.679 Sum_probs=26.3
Q ss_pred CcccccccCC-CceeeecCCCCCC-cccccccccc
Q 002891 581 IDVCCICRHK-HGICIKCNYGNCQ-TTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~-~GAcIqCs~~~C~-~aFH~tCA~~ 613 (870)
...| +|++. .|.+|+|...+|. .+||..|.-.
T Consensus 36 ~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVgl 69 (91)
T 1weu_A 36 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 69 (91)
T ss_dssp CBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTTC
T ss_pred CcEE-ECCCCCCCCEeEecCCCCCCCCEecccCCc
Confidence 4667 99984 6889999966698 7999999863
No 62
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=84.69 E-value=0.32 Score=43.66 Aligned_cols=49 Identities=22% Similarity=0.708 Sum_probs=38.8
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccccC---C-----------CCCCCceecccchhh
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYRN---A-----------KESTGPWYCELCEEL 508 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi---~-----------~ipeg~WLCd~C~~~ 508 (870)
++..|.||...+ .+.++-|+-|+..+|..|..- . -.++..|.|..|.+.
T Consensus 14 ~D~~C~VC~~~t--~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEVWT--AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCCCC--SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCcccccc--ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 567899998755 478899999999999999832 1 124678999999874
No 63
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=84.33 E-value=0.72 Score=39.65 Aligned_cols=33 Identities=27% Similarity=0.651 Sum_probs=26.6
Q ss_pred CCcccccccCC-CceeeecCCCCCC-cccccccccc
Q 002891 580 GIDVCCICRHK-HGICIKCNYGNCQ-TTFHPTCARS 613 (870)
Q Consensus 580 ~k~~CsIC~~~-~GAcIqCs~~~C~-~aFH~tCA~~ 613 (870)
....| +|++. .|.+|+|...+|. .+||..|.-.
T Consensus 15 ~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvgl 49 (71)
T 1wen_A 15 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 49 (71)
T ss_dssp SCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTTC
T ss_pred CCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCCc
Confidence 35677 89984 6889999966698 6999999963
No 64
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=84.08 E-value=0.46 Score=40.52 Aligned_cols=31 Identities=32% Similarity=0.750 Sum_probs=25.5
Q ss_pred CcccccccCC--CceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...| +|++. ++.+|+|. .|..+||..|.-..
T Consensus 19 ~~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvgi~ 51 (68)
T 3o70_A 19 LVTC-FCMKPFAGRPMIECN--ECHTWIHLSCAKIR 51 (68)
T ss_dssp CCCS-TTCCCCTTCCEEECT--TTCCEEETTTTTCC
T ss_pred ceEe-ECCCcCCCCCEEECC--CCCccccccccCcC
Confidence 4678 99985 45799999 89999999999543
No 65
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=83.69 E-value=0.46 Score=46.63 Aligned_cols=48 Identities=25% Similarity=0.591 Sum_probs=39.3
Q ss_pred CcCcccCCCC-CCCCCEEEecCCCceeccccccCCCCCCCceecccchhh
Q 002891 460 RSCDICRRSE-TILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEEL 508 (870)
Q Consensus 460 ~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~ 508 (870)
..|.+|...- ...|.-..|..|...|=+.|- +..-+++.|+|..|...
T Consensus 69 ~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~-~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 69 THCARCLQPYRLLLNSRRQCLECSLFVCKSCS-HAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp TBCTTTCCBGGGCSSCCEECTTTCCEECGGGE-ECCSSSSSCEEHHHHHH
T ss_pred ccchhhcCccccccCCCCcCCCCCchhhcccc-cccCCCCcEeeHHHHHH
Confidence 5799999853 357888999999999999994 44345789999999875
No 66
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=83.61 E-value=0.47 Score=43.02 Aligned_cols=46 Identities=24% Similarity=0.507 Sum_probs=32.5
Q ss_pred cccccccCC--CceeeecCCCCCCccccccccccCCceEEEeeCCCceeeeEeCCCCChh
Q 002891 582 DVCCICRHK--HGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSLE 639 (870)
Q Consensus 582 ~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~~g~i~~kaYC~kHs~~ 639 (870)
.+| +|+.. .|.+|+|. .|..+||..|.-...-. +.-..||+.-.+.
T Consensus 29 vrC-iC~~~~~~~~mi~Cd--~C~~w~H~~C~~~~~~~---------~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCD--KCSVWQHIDCMGIDRQH---------IPDTYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBT--TTCBEEETTTTTCCTTS---------CCSSBCCTTTSSS
T ss_pred EEe-ECCCccCCCcEEEcC--CCCCcCcCcCCCCCccC---------CCCCEECCCCcCC
Confidence 567 78875 68999999 99999999998542111 1124688887653
No 67
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=83.43 E-value=0.4 Score=41.64 Aligned_cols=30 Identities=33% Similarity=0.788 Sum_probs=24.9
Q ss_pred CcccccccCC---CceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHK---HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...| +|++. .+.+|+|. .|..+||..|.-.
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cvgl 44 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCVGI 44 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHHTC
T ss_pred ccEE-EcCCccCCCCceEEcC--CCCCcEEeeecCc
Confidence 3556 99985 58899999 8999999999853
No 68
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=83.20 E-value=0.53 Score=39.05 Aligned_cols=32 Identities=28% Similarity=0.682 Sum_probs=25.9
Q ss_pred CcccccccCC-CceeeecCCCCCC-cccccccccc
Q 002891 581 IDVCCICRHK-HGICIKCNYGNCQ-TTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~-~GAcIqCs~~~C~-~aFH~tCA~~ 613 (870)
...| +|++. .|.+|+|...+|. .+||..|.-.
T Consensus 9 ~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvgl 42 (59)
T 3c6w_A 9 PTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVDL 42 (59)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCCc
Confidence 4566 89974 6889999966698 6999999863
No 69
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=82.82 E-value=0.42 Score=40.82 Aligned_cols=32 Identities=25% Similarity=0.575 Sum_probs=26.4
Q ss_pred CcccccccCC--CceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|++. ++.+|.|. .|..+||..|.-..
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~~~ 51 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCD--DCDDWYHWPCVGIM 51 (75)
T ss_dssp EECBTTTTBCCSSCCEEECS--SSSSEEEHHHHTCS
T ss_pred CcCCCCCCCCCCCCCEEEcC--CCCcccccccCCCC
Confidence 4679999985 34699999 89999999998543
No 70
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=82.79 E-value=0.63 Score=39.14 Aligned_cols=31 Identities=35% Similarity=0.880 Sum_probs=27.2
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|.+|.|. .|..+||..|....
T Consensus 8 ~~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~pp 38 (66)
T 1xwh_A 8 EDECAVCRD-GGELICCD--GCPRAFHLACLSPP 38 (66)
T ss_dssp CCSBSSSSC-CSSCEECS--SCCCEECTTTSSSC
T ss_pred CCCCccCCC-CCCEEEcC--CCChhhcccccCCC
Confidence 578999997 68899999 89999999998753
No 71
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=82.69 E-value=0.54 Score=38.73 Aligned_cols=48 Identities=23% Similarity=0.602 Sum_probs=34.6
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccCCceEEEeeCCCceeeeEeCCCCChh
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSLE 639 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~~g~i~~kaYC~kHs~~ 639 (870)
...|.+|+. .|..|.|. .|..+||..|....-..+ ..+ ..||+.....
T Consensus 5 ~~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~ppl~~~----p~g----~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRK-SGQLLMCD--TCSRVYHLDCLDPPLKTI----PKG----MWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCC-CSSCEECS--SSSCEECGGGSSSCCSSC----CCS----CCCCHHHHHH
T ss_pred CCCCcCCCC-CCcEEEcC--CCCcCEECCcCCCCcCCC----CCC----ceEChhccCh
Confidence 467999998 58999999 999999999998532211 122 3478776543
No 72
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=82.45 E-value=0.54 Score=39.44 Aligned_cols=33 Identities=27% Similarity=0.668 Sum_probs=26.4
Q ss_pred CcccccccCC-CceeeecCCCCCC-ccccccccccC
Q 002891 581 IDVCCICRHK-HGICIKCNYGNCQ-TTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~-~GAcIqCs~~~C~-~aFH~tCA~~a 614 (870)
...| +|++. .|.+|+|...+|. .+||..|.-..
T Consensus 11 ~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvgl~ 45 (62)
T 2g6q_A 11 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLT 45 (62)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGTCS
T ss_pred CcEE-ECCCCCCCCeeeeeCCCCCcccEecccCCcC
Confidence 4566 89984 6899999966688 99999999643
No 73
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=82.34 E-value=0.51 Score=40.24 Aligned_cols=31 Identities=26% Similarity=0.597 Sum_probs=25.3
Q ss_pred CcccccccCC--Cc-eeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHK--HG-ICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~--~G-AcIqCs~~~C~~aFH~tCA~~a 614 (870)
...| +|++. .| .+|+|. .|..+||..|+-..
T Consensus 16 ~~~C-~C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg~~ 49 (72)
T 1wee_A 16 KVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIGIN 49 (72)
T ss_dssp EECC-TTCCCSCCSSCEEECS--SSCEEEETTTTTCC
T ss_pred ceEe-eCCCccCCCCcEEECC--CCCCccCCeeeccC
Confidence 4678 79986 35 699999 89999999998543
No 74
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.29 E-value=0.84 Score=37.11 Aligned_cols=31 Identities=29% Similarity=0.894 Sum_probs=27.2
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. .|..|.|. .|..+||..|....
T Consensus 9 ~~~C~vC~~-~g~ll~Cd--~C~~~~H~~Cl~pp 39 (56)
T 2yql_A 9 EDFCSVCRK-SGQLLMCD--TCSRVYHLDCLDPP 39 (56)
T ss_dssp CCSCSSSCC-SSCCEECS--SSSCEECSSSSSSC
T ss_pred CCCCccCCC-CCeEEEcC--CCCcceECccCCCC
Confidence 478999998 58899999 99999999999753
No 75
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=81.94 E-value=0.68 Score=42.56 Aligned_cols=30 Identities=33% Similarity=0.745 Sum_probs=26.0
Q ss_pred cccccccCC---CceeeecCCCCCCccccccccc
Q 002891 582 DVCCICRHK---HGICIKCNYGNCQTTFHPTCAR 612 (870)
Q Consensus 582 ~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~ 612 (870)
..|.+|++. .|..|+|. ..|..+||..|.-
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cd-d~C~~WfH~~CVg 36 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCE-ASCQKWFHRECTG 36 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECT-TTTCCEEEGGGTT
T ss_pred CCCCCCCCccCCCCCEEEec-CCcccccccccCC
Confidence 579999987 57899998 5999999999984
No 76
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=80.61 E-value=0.7 Score=39.23 Aligned_cols=31 Identities=26% Similarity=0.642 Sum_probs=26.8
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|..|.|. .|...||..|....
T Consensus 12 ~~~C~vC~~-~~~ll~Cd--~C~~~~H~~Cl~P~ 42 (66)
T 2lri_C 12 GARCGVCGD-GTDVLRCT--HCAAAFHWRCHFPA 42 (66)
T ss_dssp TCCCTTTSC-CTTCEECS--SSCCEECHHHHCTT
T ss_pred CCCcCCCCC-CCeEEECC--CCCCceecccCCCc
Confidence 467999996 68899999 99999999998644
No 77
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=80.38 E-value=0.66 Score=38.53 Aligned_cols=31 Identities=23% Similarity=0.874 Sum_probs=27.1
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|..|.|. .|...||..|....
T Consensus 9 ~~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~pp 39 (61)
T 1mm2_A 9 MEFCRVCKD-GGELLCCD--TCPSSYHIHCLNPP 39 (61)
T ss_dssp CSSCTTTCC-CSSCBCCS--SSCCCBCSSSSSSC
T ss_pred CCcCCCCCC-CCCEEEcC--CCCHHHcccccCCC
Confidence 478999997 68899999 89999999999753
No 78
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=79.45 E-value=0.79 Score=38.04 Aligned_cols=32 Identities=28% Similarity=0.679 Sum_probs=25.6
Q ss_pred CcccccccCC-CceeeecCCCCCC-cccccccccc
Q 002891 581 IDVCCICRHK-HGICIKCNYGNCQ-TTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~-~GAcIqCs~~~C~-~aFH~tCA~~ 613 (870)
...| +|++. .|.+|.|...+|. .+||..|.-.
T Consensus 10 ~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvgl 43 (60)
T 2vnf_A 10 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVGL 43 (60)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGTC
T ss_pred CCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCCC
Confidence 3566 89974 6889999966688 7999999963
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=79.20 E-value=0.7 Score=38.38 Aligned_cols=31 Identities=29% Similarity=0.812 Sum_probs=27.6
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. .|.+|.|. .|..+||..|....
T Consensus 11 ~~~C~vC~~-~g~ll~CD--~C~~~fH~~Cl~p~ 41 (61)
T 2l5u_A 11 QDYCEVCQQ-GGEIILCD--TCPRAYHMVCLDPD 41 (61)
T ss_dssp CSSCTTTSC-CSSEEECS--SSSCEEEHHHHCTT
T ss_pred CCCCccCCC-CCcEEECC--CCChhhhhhccCCC
Confidence 578999998 68999999 99999999999764
No 80
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=79.16 E-value=0.49 Score=46.26 Aligned_cols=29 Identities=31% Similarity=0.791 Sum_probs=25.0
Q ss_pred CcccccccCC---CceeeecCCCCCCccccccccc
Q 002891 581 IDVCCICRHK---HGICIKCNYGNCQTTFHPTCAR 612 (870)
Q Consensus 581 k~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~ 612 (870)
...| +|++. .|..|+|. .|..+||..|.-
T Consensus 8 ~~~C-~C~~~~~~~~~mi~Cd--~C~~WfH~~Cv~ 39 (174)
T 2ri7_A 8 KLYC-ICKTPEDESKFYIGCD--RCQNWYHGRCVG 39 (174)
T ss_dssp CEET-TTTEECCTTSCEEECT--TTCCEEEHHHHT
T ss_pred CcEe-eCCCCCCCCCCEeECC--CCCchhChhhcC
Confidence 4678 99985 57799999 999999999983
No 81
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=78.50 E-value=1 Score=36.21 Aligned_cols=30 Identities=20% Similarity=0.521 Sum_probs=24.3
Q ss_pred ccccccCC---CceeeecCCCCCCcccccccccc
Q 002891 583 VCCICRHK---HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 583 ~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
.|.+|++. .+..|+|.. .|..+||..|+-.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cvgl 36 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDG-GCDEWFHQVCVGV 36 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTT-TTCCEEETTTTTC
T ss_pred cCCCCcCccCCCCcEEEeCC-CCCccCcccccCC
Confidence 47789886 356899997 8999999999743
No 82
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=78.41 E-value=0.98 Score=40.76 Aligned_cols=31 Identities=29% Similarity=0.693 Sum_probs=25.2
Q ss_pred CcccccccC-CCceeeecCCCCCC-ccccccccc
Q 002891 581 IDVCCICRH-KHGICIKCNYGNCQ-TTFHPTCAR 612 (870)
Q Consensus 581 k~~CsIC~~-~~GAcIqCs~~~C~-~aFH~tCA~ 612 (870)
...| +|++ ..|.+|.|...+|. .+||..|.-
T Consensus 26 ~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVg 58 (90)
T 2jmi_A 26 EVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVG 58 (90)
T ss_dssp SCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSS
T ss_pred CcEE-EeCCCCCCCEEEecCCCCccccCcCccCC
Confidence 4677 9997 36889999966677 799999984
No 83
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=76.75 E-value=0.92 Score=41.61 Aligned_cols=37 Identities=24% Similarity=0.547 Sum_probs=28.1
Q ss_pred CCCEEEecCCCceeccccccCCCC------CCCceecccchhh
Q 002891 472 LNPILICSGCKVAVHLDCYRNAKE------STGPWYCELCEEL 508 (870)
Q Consensus 472 ~N~IV~Cd~C~IaVHq~CYGi~~i------peg~WLCd~C~~~ 508 (870)
...|+.|+.|.-.||..|.++... ..+.|.|..|...
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 456999999999999999987521 2346999999753
No 84
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=76.56 E-value=1.1 Score=35.87 Aligned_cols=28 Identities=36% Similarity=0.832 Sum_probs=22.9
Q ss_pred ccccCC--CceeeecCCCCCCccccccccccC
Q 002891 585 CICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 585 sIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
.+|++. ++.+|+|. .|..+||..|.-..
T Consensus 7 C~C~~~~~~~~MI~Cd--~C~~W~H~~Cvgi~ 36 (52)
T 3o7a_A 7 CFCMKPFAGRPMIECN--ECHTWIHLSCAKIR 36 (52)
T ss_dssp STTCCBCTTCCEEECT--TTCCEEETTTTTCC
T ss_pred EEeCCcCCCCCEEEcC--CCCccccccccCCC
Confidence 468875 46899999 89999999998543
No 85
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=76.17 E-value=0.99 Score=35.78 Aligned_cols=29 Identities=38% Similarity=0.919 Sum_probs=24.7
Q ss_pred ccccccCC--CceeeecCCCCCCcccccccccc
Q 002891 583 VCCICRHK--HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 583 ~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
.|.+|++. .+.+|.|. .|..+||..|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCC
Confidence 58999974 35789999 9999999999964
No 86
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=74.47 E-value=3 Score=38.14 Aligned_cols=81 Identities=20% Similarity=0.358 Sum_probs=46.9
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCCCCceecccchhhccCCCCCCCCCCccCCCCcccccccCCCCC
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEELLSSRSSGAPSVNFWEKPYFVAECSLCGGTT 538 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~~~C~LCp~~g 538 (870)
-.+|.+|... .|+.|....|..|+|.. .|+|..|....-... .. + ....|.+|..-+
T Consensus 7 C~~C~~C~~~--------~C~~C~~c~~~~~~~~~-----~~~~~~c~~~~~~~~----~~-----~-~~~~c~~c~~c~ 63 (117)
T 4bbq_A 7 CRKCKACVQG--------ECGVCHYCRDMKKFGGP-----GRMKQSCVLRQCLAP----RL-----P-HSVTCSLCGEVD 63 (117)
T ss_dssp CSCSHHHHSC--------CCSCSHHHHHSGGGTSC-----CCSCCCCGGGCCSSC----BC-----C-TTCBCTTTCCBC
T ss_pred CCcCcCcCCc--------CCCCCCCCcCCcccCCC-----Cccccchhheeeccc----cc-----c-ccccccccCccc
Confidence 3567777763 29999999999987643 589998876432110 00 0 022344443311
Q ss_pred ---------CCcc-cccCCceeeeecccccccee
Q 002891 539 ---------GAFR-KSANGQWVHAFCAEWVFEST 562 (870)
Q Consensus 539 ---------GALK-~Tsdg~WVHVvCALWiPEv~ 562 (870)
..|. ...-..|+|..|.-...+..
T Consensus 64 ~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~ 97 (117)
T 4bbq_A 64 QNEETQDFEKKLMECCICNEIVHPGCLQMDGEGL 97 (117)
T ss_dssp CHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCE
T ss_pred ccccccccCcceEEeeecCCeEECCCCCCCcccc
Confidence 1232 33456899999976554443
No 87
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=73.59 E-value=1.7 Score=37.34 Aligned_cols=33 Identities=24% Similarity=0.626 Sum_probs=27.7
Q ss_pred CCcccccccCCC----ceeeecCCCCCCccccccccccC
Q 002891 580 GIDVCCICRHKH----GICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 580 ~k~~CsIC~~~~----GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
....|.+|+... +..|.|. .|..+||..|.-..
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD--~C~~~~H~~Cl~~~ 51 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVP 51 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECS--SSCCEEEHHHHTCS
T ss_pred CCCCCCCCCCCCCCCCCCEEECC--CCCCccccccCCCC
Confidence 457899999742 5899999 99999999998654
No 88
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=72.90 E-value=2.5 Score=39.24 Aligned_cols=32 Identities=25% Similarity=0.674 Sum_probs=28.2
Q ss_pred CCcccccccCCCceeeecCCCCCCccccccccc
Q 002891 580 GIDVCCICRHKHGICIKCNYGNCQTTFHPTCAR 612 (870)
Q Consensus 580 ~k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~ 612 (870)
....|.+|+. +|-+|.|....|..+||..|.-
T Consensus 14 ~~~~C~~C~~-~G~ll~CD~~~Cp~~fH~~Cl~ 45 (107)
T 4gne_A 14 HEDYCFQCGD-GGELVMCDKKDCPKAYHLLCLN 45 (107)
T ss_dssp SCSSCTTTCC-CSEEEECCSTTCCCEECTGGGT
T ss_pred CCCCCCcCCC-CCcEeEECCCCCCcccccccCc
Confidence 3578999995 7999999988999999999985
No 89
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=72.39 E-value=1.7 Score=36.01 Aligned_cols=32 Identities=25% Similarity=0.746 Sum_probs=27.4
Q ss_pred CcccccccCC----CceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHK----HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~----~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+.. .+.+|.|. .|...||..|....
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd--~C~~~~H~~C~~p~ 41 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICD--KCGQGYHQLCHTPH 41 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECS--SSCCEEETTTSSSC
T ss_pred CCCCCCCCCCCCCCCCCEEECC--CCChHHHhhhCCCc
Confidence 4689999975 38899999 99999999998753
No 90
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=72.39 E-value=2.4 Score=40.70 Aligned_cols=49 Identities=22% Similarity=0.619 Sum_probs=38.6
Q ss_pred CcCcccCCCCC-CCCCEEEecCCCceeccccccCCC--CCCCceecccchhh
Q 002891 460 RSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAK--ESTGPWYCELCEEL 508 (870)
Q Consensus 460 ~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~--ipeg~WLCd~C~~~ 508 (870)
..|.+|...-+ ..|.=..|..|...|=+.|-+... .....|+|..|...
T Consensus 56 ~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 56 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred ccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 57999998553 567789999999999999965432 23568999999875
No 91
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.27 E-value=3.6 Score=35.90 Aligned_cols=34 Identities=24% Similarity=0.619 Sum_probs=27.6
Q ss_pred CCcCcccCCCCC-CCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSET-ILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|...=. ...+-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 28 PTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 468999987432 3467899999999999999865
No 92
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=72.23 E-value=1.7 Score=36.33 Aligned_cols=35 Identities=29% Similarity=0.634 Sum_probs=27.4
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccCC
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNA 493 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~ 493 (870)
...|++|.+.-..+.+-+.|..|++.+|..|-...
T Consensus 19 ~~~C~~Cg~~i~~gkq~~kC~dC~~~cH~~C~~~~ 53 (61)
T 4b6d_A 19 PESCVPCGKRIKFGKLSLKCRDCRVVSHPECRDRC 53 (61)
T ss_dssp CEECTTTCCEECTTCEEEEESSSSCEECGGGGGGS
T ss_pred CcccccccCEEEEeeEeeECCCCCCeEchhHhhcC
Confidence 36899997633345688999999999999996543
No 93
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=71.76 E-value=2.8 Score=33.10 Aligned_cols=32 Identities=28% Similarity=0.587 Sum_probs=26.1
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccCC
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNA 493 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~ 493 (870)
...|++|...= . +-+.|..|++.||..|....
T Consensus 14 pt~C~~C~~~l--~-qG~~C~~C~~~~H~~C~~~v 45 (52)
T 1faq_A 14 LAFCDICQKFL--L-NGFRCQTCGYKFHEHCSTKV 45 (52)
T ss_dssp CEECTTSSSEE--C-SEEECTTTTCCBCSTTSSSS
T ss_pred CcCCCCccccc--c-cCCEeCCCCCeEChhHHhhC
Confidence 36899998632 2 78999999999999998654
No 94
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=71.58 E-value=1.5 Score=37.06 Aligned_cols=31 Identities=32% Similarity=0.733 Sum_probs=25.2
Q ss_pred CcccccccCC---CceeeecCCCCCCccccccccc
Q 002891 581 IDVCCICRHK---HGICIKCNYGNCQTTFHPTCAR 612 (870)
Q Consensus 581 k~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~ 612 (870)
...|.+|++. ....|+|.. .|..+||..|.-
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cvg 41 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEA-SCQKWFHRICTG 41 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHHT
T ss_pred cCcCccCCCccCCCCCeEeccc-CccccCchhccC
Confidence 3579999986 346899994 999999999973
No 95
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=70.97 E-value=2.8 Score=36.19 Aligned_cols=35 Identities=23% Similarity=0.614 Sum_probs=27.9
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceeccccccCC
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRNA 493 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi~ 493 (870)
...|++|...= ....+-+.|..|++.||..|....
T Consensus 34 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v 69 (77)
T 2enn_A 34 PTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKV 69 (77)
T ss_dssp CEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSC
T ss_pred CcCccccChhhccccccccCcCCCCCcCCHhHHhhC
Confidence 46899998742 234688999999999999998653
No 96
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=70.80 E-value=3 Score=32.54 Aligned_cols=34 Identities=29% Similarity=0.666 Sum_probs=27.2
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|...= +...+-+.|..|++.||..|...
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 45 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 45 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhhh
Confidence 36899998743 23468899999999999999764
No 97
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=70.77 E-value=1.6 Score=43.21 Aligned_cols=30 Identities=30% Similarity=0.840 Sum_probs=25.8
Q ss_pred CcccccccCCCceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...|.+|+. +|..+.|. .|...||..|...
T Consensus 4 ~~~C~~C~~-~g~ll~Cd--~C~~~~H~~C~~p 33 (184)
T 3o36_A 4 EDWCAVCQN-GGELLCCE--KCPKVFHLSCHVP 33 (184)
T ss_dssp CSSCTTTCC-CSSCEECS--SSSCEECTTTSSS
T ss_pred CCccccCCC-CCeeeecC--CCCcccCccccCC
Confidence 357999996 68899999 8999999999754
No 98
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=70.76 E-value=1.8 Score=39.02 Aligned_cols=48 Identities=25% Similarity=0.572 Sum_probs=34.7
Q ss_pred CCcccccccCCCceeeecCCCCCCccccccccccCCceEEEeeCCCceeeeEeCCCCCh
Q 002891 580 GIDVCCICRHKHGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSL 638 (870)
Q Consensus 580 ~k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~~g~i~~kaYC~kHs~ 638 (870)
+...|.+|+. +|..|.|. .|...||..|....-..+ ..+. .||+.-..
T Consensus 24 n~~~C~vC~~-~g~LL~CD--~C~~~fH~~Cl~PpL~~~----P~g~----W~C~~C~~ 71 (88)
T 1fp0_A 24 SATICRVCQK-PGDLVMCN--QCEFCFHLDCHLPALQDV----PGEE----WSCSLCHV 71 (88)
T ss_dssp SSSCCSSSCS-SSCCEECT--TSSCEECTTSSSTTCCCC----CSSS----CCCCSCCC
T ss_pred CCCcCcCcCC-CCCEEECC--CCCCceecccCCCCCCCC----cCCC----cCCccccC
Confidence 3578999997 58899999 999999999996542211 2232 37777764
No 99
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=70.20 E-value=1.9 Score=36.83 Aligned_cols=29 Identities=24% Similarity=0.767 Sum_probs=24.6
Q ss_pred ccccccCC--CceeeecCCCCCCcccccccccc
Q 002891 583 VCCICRHK--HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 583 ~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
.|.+|++. .|.+|.|. .|...||..|...
T Consensus 20 ~C~~C~~~~~~~~ll~CD--~C~~~yH~~Cl~P 50 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDP 50 (70)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEEGGGSSS
T ss_pred CCcCCCCcCCCCCEEEcC--CCCCceecccCCC
Confidence 56788863 68899999 9999999999874
No 100
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=70.15 E-value=4.1 Score=33.87 Aligned_cols=34 Identities=26% Similarity=0.606 Sum_probs=27.3
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|...= ....+-+.|..|++.||..|...
T Consensus 23 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 23 PTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 46899998743 23467899999999999999764
No 101
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=68.88 E-value=1.9 Score=43.47 Aligned_cols=31 Identities=32% Similarity=0.818 Sum_probs=26.4
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|..|.|. +|...||..|....
T Consensus 7 ~~~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~p~ 37 (207)
T 3u5n_A 7 EDWCAVCQN-GGDLLCCE--KCPKVFHLTCHVPT 37 (207)
T ss_dssp CSSBTTTCC-CEEEEECS--SSSCEECTTTSSSC
T ss_pred CCCCCCCCC-CCceEEcC--CCCCccCCccCCCC
Confidence 467999996 68899999 89999999998643
No 102
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.96 E-value=2.4 Score=37.71 Aligned_cols=32 Identities=22% Similarity=0.746 Sum_probs=27.3
Q ss_pred CcccccccCC----CceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHK----HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~----~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+.. .+..|.|. .|...||..|....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD--~C~~~yH~~Cl~Pp 51 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHKPQ 51 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSSSC
T ss_pred CCcCCCCCCCCCCCCCceEECC--CCCCeEcCccCCCc
Confidence 4689999985 37899999 99999999998754
No 103
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=67.74 E-value=2.4 Score=42.59 Aligned_cols=30 Identities=20% Similarity=0.689 Sum_probs=24.8
Q ss_pred cccccccCC------CceeeecCCCCCCcccccccccc
Q 002891 582 DVCCICRHK------HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 582 ~~CsIC~~~------~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
..|.+|++. .+.+|+|. .|..+||..|.-.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cvgi 38 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCENL 38 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGSSC
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhcccc
Confidence 569999985 23499999 9999999999843
No 104
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=67.67 E-value=2.9 Score=34.71 Aligned_cols=34 Identities=29% Similarity=0.666 Sum_probs=27.3
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|.+.= +...+-+.|..|++.||..|...
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 54 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREK 54 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhhh
Confidence 46899998743 23467899999999999999764
No 105
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.24 E-value=2.4 Score=37.01 Aligned_cols=30 Identities=23% Similarity=0.768 Sum_probs=25.6
Q ss_pred ccccccCC--CceeeecCCCCCCccccccccccC
Q 002891 583 VCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 583 ~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
.|.+|++. .|.+|.|. .|...||..|....
T Consensus 28 ~C~vC~~~~~~~~ll~CD--~C~~~yH~~Cl~Pp 59 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCD--ECNVAYHIYCLNPP 59 (77)
T ss_dssp SCSSSCCCCCSTTEEECS--SSCCEEETTSSSSC
T ss_pred CCcCcCCcCCCCCEEEcC--CCCccccccccCCC
Confidence 68899873 78899999 99999999998743
No 106
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=65.87 E-value=1.6 Score=37.42 Aligned_cols=28 Identities=32% Similarity=0.918 Sum_probs=23.3
Q ss_pred cccccCC---CceeeecCCCCCCcccccccccc
Q 002891 584 CCICRHK---HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 584 CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
-.+|++. .+.+|+|. .|..+||..|.-.
T Consensus 12 yCiC~~~~~~~~~MI~Cd--~C~~WfH~~Cvg~ 42 (75)
T 3kqi_A 12 YCVCRLPYDVTRFMIECD--ACKDWFHGSCVGV 42 (75)
T ss_dssp ETTTTEECCTTSCEEECT--TTCCEEEHHHHTC
T ss_pred EEECCCcCCCCCCEEEcC--CCCCCEecccccc
Confidence 3489875 46899999 8999999999954
No 107
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=65.59 E-value=2.6 Score=37.48 Aligned_cols=33 Identities=24% Similarity=0.626 Sum_probs=27.2
Q ss_pred CCcccccccCCC----ceeeecCCCCCCccccccccccC
Q 002891 580 GIDVCCICRHKH----GICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 580 ~k~~CsIC~~~~----GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
....|.+|+..+ +.+|.|. .|..+||..|....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD--~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVP 60 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECS--SSCCCCCHHHHTCS
T ss_pred CCCcCCcCCCCCCCCCCCEEECC--CCCchhhcccCCCC
Confidence 357899999732 3889999 99999999998754
No 108
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=65.31 E-value=3.9 Score=34.16 Aligned_cols=34 Identities=26% Similarity=0.501 Sum_probs=27.1
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|...= ....+-+.|..|++.||..|...
T Consensus 24 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 24 PTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 46899998743 22457899999999999999754
No 109
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=64.35 E-value=3.8 Score=35.13 Aligned_cols=32 Identities=38% Similarity=0.856 Sum_probs=26.5
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|+.|...= ..+-+.|..|++.+|..|...
T Consensus 35 pt~C~~C~~~l--~~qG~kC~~C~~~cHkkC~~~ 66 (72)
T 2fnf_X 35 PGWCDLCGREV--LRQALRCANCKFTCHSECRSL 66 (72)
T ss_dssp CCBCTTTSSBC--SSCCEECTTSSCEECTGGGGG
T ss_pred CcchhhhhHHH--HhCcCccCCCCCeechhhhcc
Confidence 36899998743 567789999999999999854
No 110
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.90 E-value=6.3 Score=34.61 Aligned_cols=35 Identities=29% Similarity=0.664 Sum_probs=27.8
Q ss_pred CCCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 458 HPRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 458 ~~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
....|++|...= ....+-+.|..|++.||..|...
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 346899998743 23468899999999999999764
No 111
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.64 E-value=2.8 Score=37.55 Aligned_cols=49 Identities=20% Similarity=0.444 Sum_probs=33.8
Q ss_pred CcccccccCCC--ceeeecCCCCCCccccccccccCCceEEEeeCCCceeeeEeCCCCChh
Q 002891 581 IDVCCICRHKH--GICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSLE 639 (870)
Q Consensus 581 k~~CsIC~~~~--GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~~g~i~~kaYC~kHs~~ 639 (870)
...|.+|+... +.+|.|. .|..+||..|....-..+ ..+ ..||+.....
T Consensus 16 ~~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~Ppl~~~----P~g----~W~C~~C~~~ 66 (92)
T 2e6r_A 16 SYICQVCSRGDEDDKLLFCD--GCDDNYHIFCLLPPLPEI----PRG----IWRCPKCILA 66 (92)
T ss_dssp CCCCSSSCCSGGGGGCEECT--TTCCEECSSSSSSCCSSC----CSS----CCCCHHHHHH
T ss_pred CCCCccCCCcCCCCCEEEcC--CCCchhccccCCCCcccC----CCC----CcCCccCcCc
Confidence 36799999853 4689999 899999999997432211 122 3478777543
No 112
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=62.59 E-value=2.7 Score=42.05 Aligned_cols=29 Identities=31% Similarity=0.886 Sum_probs=25.5
Q ss_pred cccccccCCCceeeecCCCCCCcccccccccc
Q 002891 582 DVCCICRHKHGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 582 ~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
..|.+|+. +|..+.|. +|...||..|...
T Consensus 3 ~~C~~C~~-~g~ll~Cd--~C~~~~H~~Cl~p 31 (189)
T 2ro1_A 3 TICRVCQK-PGDLVMCN--QCEFCFHLDCHLP 31 (189)
T ss_dssp CCBTTTCC-CSSCCCCT--TTCCBCCSTTSTT
T ss_pred CcCccCCC-CCceeECC--CCCchhccccCCC
Confidence 47999996 67889999 9999999999965
No 113
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=61.80 E-value=2 Score=38.68 Aligned_cols=36 Identities=25% Similarity=0.643 Sum_probs=30.7
Q ss_pred CcccccccCC-CceeeecCCCCCCccccccccccCCceE
Q 002891 581 IDVCCICRHK-HGICIKCNYGNCQTTFHPTCARSAGFYL 618 (870)
Q Consensus 581 k~~CsIC~~~-~GAcIqCs~~~C~~aFH~tCA~~aG~~m 618 (870)
...|.||+.- .+..+.|. -|.+.||..|.++.|+.-
T Consensus 15 D~~C~VC~~~t~~~l~pCR--vC~RvfH~~CL~r~gy~~ 51 (89)
T 1wil_A 15 DEMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYIQ 51 (89)
T ss_dssp SCCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSCC
T ss_pred CcccCccccccccceeccc--cccccccHhhcccccccc
Confidence 4789999963 67788899 999999999999987754
No 114
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.39 E-value=3.7 Score=36.14 Aligned_cols=50 Identities=32% Similarity=0.727 Sum_probs=38.9
Q ss_pred CCCCcCcccCCCCC-CCCCEEEecCCCceeccccccCCCCCCCceecccchhh
Q 002891 457 EHPRSCDICRRSET-ILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEEL 508 (870)
Q Consensus 457 e~~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~ 508 (870)
+....|.-|...=+ ..|.-..|..|...|=+.| ++.. ..+.|+|-.|...
T Consensus 23 ~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~C-rv~~-~~~~W~C~VC~k~ 73 (76)
T 2csz_A 23 YSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDC-RIQE-SNGTWRCKVCSGP 73 (76)
T ss_dssp CCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTS-EEEC-STTCEEEHHHHSS
T ss_pred CCccchhhhCccccccccCCCcCcccChhhcccc-cccC-CCCCEEEeeCchh
Confidence 34578999997543 5788889999999999999 4433 2378999999863
No 115
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.94 E-value=4.3 Score=34.74 Aligned_cols=32 Identities=28% Similarity=0.706 Sum_probs=24.7
Q ss_pred cccccccC-CCceeeecCCCCC-CccccccccccC
Q 002891 582 DVCCICRH-KHGICIKCNYGNC-QTTFHPTCARSA 614 (870)
Q Consensus 582 ~~CsIC~~-~~GAcIqCs~~~C-~~aFH~tCA~~a 614 (870)
..| +|++ ..|.+|+|...+| ..+||..|.-..
T Consensus 7 ~yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvgl~ 40 (70)
T 1x4i_A 7 GYC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVGLT 40 (70)
T ss_dssp CCS-TTSCCCCSSEECCSCTTCSCCCEEHHHHTCS
T ss_pred eEE-EcCCCCCCCEeEeCCCCCCccCCcccccccC
Confidence 456 5887 4789999996667 489999999643
No 116
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=59.91 E-value=3.2 Score=48.54 Aligned_cols=33 Identities=24% Similarity=0.491 Sum_probs=0.0
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceecccccc
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYR 491 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYG 491 (870)
..+|++|...= +...+=+.|..|++.||..|..
T Consensus 48 p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~ 81 (674)
T 3pfq_A 48 PTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHE 81 (674)
T ss_dssp ----------------------------------
T ss_pred CCccccccccccccCCceeECCCCCCCcChhhcC
Confidence 46899998742 2345778999999999999964
No 117
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.80 E-value=2.3 Score=36.49 Aligned_cols=34 Identities=32% Similarity=0.666 Sum_probs=26.9
Q ss_pred CCcCcccCCCCC-CCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSET-ILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E~-~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|++|...=. ...+-+.|..|++.||..|...
T Consensus 28 pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 28 PKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp CEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 468999986421 2357899999999999999864
No 118
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=57.50 E-value=3.6 Score=40.01 Aligned_cols=31 Identities=26% Similarity=0.602 Sum_probs=26.9
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|..|-|. .|...||..|....
T Consensus 63 ~d~C~vC~~-GG~LlcCD--~Cpr~Fh~~Cl~p~ 93 (142)
T 2lbm_A 63 DEQCRWCAE-GGNLICCD--FCHNAFCKKCILRN 93 (142)
T ss_dssp BCSCSSSCC-CSSEEECS--SSCCEEEHHHHHHH
T ss_pred CCeecccCC-CCcEEeCC--CCCCeeeHhhcCCC
Confidence 368999997 78899998 99999999999753
No 119
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=51.62 E-value=8.3 Score=31.02 Aligned_cols=29 Identities=24% Similarity=0.820 Sum_probs=23.3
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceecccccc
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYR 491 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG 491 (870)
..|++|...=- . =+.|..|+..+|+.|-.
T Consensus 15 t~C~~C~k~i~-~--G~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMI-F--GVKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSC-C--EEEETTTTEEESSSCTT
T ss_pred cCccccCceeE-C--cCCCCCCCCccchhhcC
Confidence 57999987432 2 28999999999999975
No 120
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=50.36 E-value=4.2 Score=33.42 Aligned_cols=32 Identities=38% Similarity=0.856 Sum_probs=26.3
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|+.|.+.= ..+-+.|..|++.+|..|...
T Consensus 22 pt~C~~C~~~i--~kqg~kC~~C~~~cH~kC~~~ 53 (59)
T 1rfh_A 22 PGWCDLCGREV--LRQALRCANCKFTCHSECRSL 53 (59)
T ss_dssp CEECTTTCSEE--CSCCEECTTTSCEECHHHHTT
T ss_pred CeEchhcchhh--hhCccEeCCCCCeEehhhhhh
Confidence 36899998643 467789999999999999854
No 121
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=48.81 E-value=6.4 Score=40.97 Aligned_cols=31 Identities=23% Similarity=0.686 Sum_probs=22.9
Q ss_pred cccccccCC--CceeeecCCCCCCccccccccccC
Q 002891 582 DVCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 582 ~~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
-.|.+|+.. .|.++.|. .|...||..|....
T Consensus 175 c~C~vC~~~~~~~~lL~CD--~C~~~yH~~CL~PP 207 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPP 207 (226)
T ss_dssp TSCSSSCCCCC--CCEECS--SSCCEECSCC--CC
T ss_pred CCCcCCCCCCCCCCeEEcC--CCCcceeCccCCCC
Confidence 368899874 67889999 99999999998753
No 122
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=48.72 E-value=13 Score=31.40 Aligned_cols=51 Identities=22% Similarity=0.493 Sum_probs=32.8
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCC--CCceecccchh
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKES--TGPWYCELCEE 507 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ip--eg~WLCd~C~~ 507 (870)
++...|.||......++-=-.|.-|++.+-..|=|-..+. .-.|.|..|..
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 4557899999754333333456666666666665544333 34699999975
No 123
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=48.03 E-value=12 Score=37.76 Aligned_cols=48 Identities=8% Similarity=-0.027 Sum_probs=29.6
Q ss_pred ccccCC---CceeeecCCCCCCccccccccccCCceEEEeeCCCceeeeEeCCCCCh
Q 002891 585 CICRHK---HGICIKCNYGNCQTTFHPTCARSAGFYLNVKSTGGNFQHKAYCEKHSL 638 (870)
Q Consensus 585 sIC~~~---~GAcIqCs~~~C~~aFH~tCA~~aG~~m~~k~~~g~i~~kaYC~kHs~ 638 (870)
++|+.. .-..++|. .|.++||..|-+.....+ ..+..-+.+.|..=++
T Consensus 8 CYCG~~~~~~~~mLqC~--~C~qWFH~~Cl~~~~~~~----lp~~~fY~F~C~~C~~ 58 (177)
T 3rsn_A 8 VDEENGRQLGEVELQCG--ICTKWFTADTFGIDTSSC----LPFMTNYSFHCNVCHH 58 (177)
T ss_dssp ---CTTCCTTSCEEECT--TTCCEEEGGGGTCCCTTC----CTTCCSEEEECTTTST
T ss_pred EEcCCCCCCCceeEeec--cccceecHHHhcccccCc----cccceeEEEEccccCC
Confidence 478874 33578999 899999999997543221 1112246677876654
No 124
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=47.46 E-value=7.6 Score=33.89 Aligned_cols=30 Identities=23% Similarity=0.744 Sum_probs=24.1
Q ss_pred ccccccCC--CceeeecCCCCCCccccccccccC
Q 002891 583 VCCICRHK--HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 583 ~CsIC~~~--~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
.|.+|++. .+..|.|. .|...||..|....
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~Pp 59 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDPP 59 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSSSC
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCCCc
Confidence 46677764 46789999 99999999998754
No 125
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.62 E-value=11 Score=31.49 Aligned_cols=46 Identities=15% Similarity=-0.076 Sum_probs=36.0
Q ss_pred CCCcchhhHHHHHHHHHhhhhhhhhhhhHHHHHH--HHHHhhHHHHhhhhcchhhHHH
Q 002891 295 SPTDEVEGEIIYFQHRLLGNAFSRKRLADNLVCK--AVKTLNQEIDVARGRRWDAVLV 350 (870)
Q Consensus 295 ~P~de~e~Ei~~~q~~Ll~~~~~~k~~~~~lv~e--V~k~l~~E~~~~~~r~~d~~~~ 350 (870)
.-..|+++|...|+..|...+-.... |.+ |..+...++.+++ +.|+
T Consensus 8 ~~~~WT~eE~~~Fe~~l~~yGKdf~~-----I~~~~v~~Kt~~~~v~fY-----Y~wK 55 (63)
T 2yqk_A 8 IEKCWTEDEVKRFVKGLRQYGKNFFR-----IRKELLPNKETGELITFY-----YYWK 55 (63)
T ss_dssp CCCSCCHHHHHHHHHHHHHTCSCHHH-----HHHHSCTTSCHHHHHHHH-----HHHH
T ss_pred CCCCcCHHHHHHHHHHHHHhCccHHH-----HHHHHcCCCcHHHHHHHH-----hccc
Confidence 34689999999999999999885432 332 5668889999998 7775
No 126
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=46.04 E-value=14 Score=40.18 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=30.1
Q ss_pred CCCCCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 456 KEHPRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 456 ke~~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
......|.+|...- +..++-..|..|+..||..|.+-
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~ 391 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGR 391 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGG
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhh
Confidence 34567999999754 34678899999999999999863
No 127
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=45.27 E-value=5.5 Score=45.17 Aligned_cols=29 Identities=38% Similarity=0.918 Sum_probs=24.6
Q ss_pred cccccccCC---CceeeecCCCCCCccccccccc
Q 002891 582 DVCCICRHK---HGICIKCNYGNCQTTFHPTCAR 612 (870)
Q Consensus 582 ~~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~ 612 (870)
...++|++. .|.+|+|. .|..+||..|.-
T Consensus 5 ~~yCiC~~~~d~~~~MIqCD--~C~~WfH~~CVg 36 (447)
T 3kv4_A 5 PVYCLCRLPYDVTRFMIECD--MCQDWFHGSCVG 36 (447)
T ss_dssp CEETTTTEECCTTSCEEECT--TTCCEEEHHHHT
T ss_pred CeEEeCCCcCCCCCCeEEcC--CCCcccccccCC
Confidence 356699985 58999999 899999999984
No 128
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=45.03 E-value=7.9 Score=37.05 Aligned_cols=31 Identities=26% Similarity=0.602 Sum_probs=26.8
Q ss_pred CcccccccCCCceeeecCCCCCCccccccccccC
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
...|.+|+. +|..+-|. .|.+.||..|....
T Consensus 57 ~~~C~vC~d-GG~LlcCd--~Cpr~Fc~~Cl~~~ 87 (129)
T 3ql9_A 57 DEQCRWCAE-GGNLICCD--FCHNAFCKKCILRN 87 (129)
T ss_dssp BSSCTTTCC-CSEEEECS--SSSCEEEHHHHHHH
T ss_pred CCcCeecCC-CCeeEecC--CCchhhhHHHhCCC
Confidence 467999997 78888888 99999999999753
No 129
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=43.67 E-value=17 Score=27.99 Aligned_cols=33 Identities=15% Similarity=0.328 Sum_probs=23.3
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceeccccc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCY 490 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CY 490 (870)
+...|.||.+.-..++..+....|+=.+|..|.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci 36 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECV 36 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHH
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHH
Confidence 456899999743333445666678888888886
No 130
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.22 E-value=20 Score=31.08 Aligned_cols=51 Identities=27% Similarity=0.569 Sum_probs=28.0
Q ss_pred CCCcCcccCCCCCCCCCEEE---ecCCCceeccccccCCCCCCCceecccchhh
Q 002891 458 HPRSCDICRRSETILNPILI---CSGCKVAVHLDCYRNAKESTGPWYCELCEEL 508 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~---Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~ 508 (870)
....|.||+.....++.++. |.+..-.||+.|.-.=....+...|..|...
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~ 67 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 67 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCB
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCe
Confidence 34679999964333455552 2233489999996311001123456666653
No 131
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=41.74 E-value=6.7 Score=44.86 Aligned_cols=29 Identities=34% Similarity=0.950 Sum_probs=24.1
Q ss_pred ccccccCC---CceeeecCCCCCCcccccccccc
Q 002891 583 VCCICRHK---HGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 583 ~CsIC~~~---~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
..++|++. .|.+|+|. .|..+||..|.-.
T Consensus 38 ~yC~C~~~~d~~~~MIqCd--~C~~WfH~~Cvgl 69 (488)
T 3kv5_D 38 VYCVCRQPYDVNRFMIECD--ICKDWFHGSCVGV 69 (488)
T ss_dssp EETTTTEECCTTSCEEEBT--TTCCEEEHHHHTC
T ss_pred eEEeCCCcCCCCCCeEEcc--CCCCceeeeecCc
Confidence 33499985 68899999 8999999999943
No 132
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=41.61 E-value=11 Score=33.61 Aligned_cols=32 Identities=25% Similarity=0.557 Sum_probs=26.1
Q ss_pred CcCcccCCCCCCCCCEEEecCCCceeccccccCC
Q 002891 460 RSCDICRRSETILNPILICSGCKVAVHLDCYRNA 493 (870)
Q Consensus 460 ~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~ 493 (870)
..|++|...- .+-...|..|++.+|..|.-.+
T Consensus 48 ~~C~~C~~~~--~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEG--TIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCC--CSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCcC--CCcEEEcCCCCCeEcHHhcCCC
Confidence 5799999742 4567899999999999997543
No 133
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=41.39 E-value=18 Score=41.56 Aligned_cols=37 Identities=22% Similarity=0.530 Sum_probs=30.0
Q ss_pred CCCCcCcccCCCC-CCCCCEEEecCCCceeccccccCC
Q 002891 457 EHPRSCDICRRSE-TILNPILICSGCKVAVHLDCYRNA 493 (870)
Q Consensus 457 e~~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi~ 493 (870)
.....|.+|...= +...+-+.|..|++.||..|.+..
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC
Confidence 3457999999753 345788999999999999998753
No 134
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=41.14 E-value=11 Score=39.20 Aligned_cols=46 Identities=24% Similarity=0.554 Sum_probs=31.2
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCCCCceecccchh
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
...|.+|...-. .=+.|..|+..+|..|+.......+.-.|..|..
T Consensus 180 i~~C~iC~~iv~---~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCS---SCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCC
T ss_pred CCcCcchhhHHh---CCcccCccChHHHHHHHHHHHHhCCCCCCCCCCC
Confidence 467999997533 2389999999999999854322223345666654
No 135
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=40.78 E-value=9.5 Score=33.95 Aligned_cols=33 Identities=27% Similarity=0.776 Sum_probs=26.4
Q ss_pred CCcCcccCCCC-CCCCC--EEEecCCCceecccccc
Q 002891 459 PRSCDICRRSE-TILNP--ILICSGCKVAVHLDCYR 491 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~--IV~Cd~C~IaVHq~CYG 491 (870)
..+|+.|...= +...+ -+.|..|++.||..|..
T Consensus 35 PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 35 PTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 36899998742 23445 89999999999999987
No 136
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.94 E-value=11 Score=32.57 Aligned_cols=46 Identities=24% Similarity=0.554 Sum_probs=29.2
Q ss_pred CCcCcccCCCCCCCCCEEEecCCCceeccccccCCCCCCCceecccchh
Q 002891 459 PRSCDICRRSETILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
...|.||...-. +-+.|..|+..+|..|..--....+.=.|..|..
T Consensus 15 i~~C~IC~~~i~---~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~ 60 (74)
T 2ct0_A 15 VKICNICHSLLI---QGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCND 60 (74)
T ss_dssp SCBCSSSCCBCS---SSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCS
T ss_pred CCcCcchhhHcc---cCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcC
Confidence 357999997432 2358999999999999742111111234666654
No 137
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.54 E-value=13 Score=32.07 Aligned_cols=32 Identities=22% Similarity=0.602 Sum_probs=26.1
Q ss_pred CCcccccccCCCceeeecCCCCCCcccccccccc
Q 002891 580 GIDVCCICRHKHGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 580 ~k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
....|.||....-..+.|. .|...||..|...
T Consensus 14 ~i~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCE--TCGIRMHLPCVAK 45 (74)
T ss_dssp SSCBCSSSCCBCSSSEECS--SSCCEECHHHHHH
T ss_pred CCCcCcchhhHcccCCccC--CCCchhhHHHHHH
Confidence 3578999998654557888 9999999999964
No 138
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=34.83 E-value=4.8 Score=36.50 Aligned_cols=48 Identities=21% Similarity=0.542 Sum_probs=36.6
Q ss_pred CCcCcccCCCCC---CCCCEEEecCCCceeccccccCCCCCCCceecccchh
Q 002891 459 PRSCDICRRSET---ILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 459 ~~~CsVC~d~E~---~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
...|.||.+.-. +++.+|-|..|.+.|-..||-.. ..+|.--|..|..
T Consensus 16 ~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYE-rkeG~q~CpqCkt 66 (93)
T 1weo_A 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYE-RREGTQNCPQCKT 66 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHH-HHTSCSSCTTTCC
T ss_pred CCccccccCccccCCCCCEEEeeeccCChhhHHHHHHH-HhccCccccccCC
Confidence 468999998532 46789999999999999999543 2366667777765
No 139
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=34.21 E-value=20 Score=31.82 Aligned_cols=34 Identities=24% Similarity=0.566 Sum_probs=25.9
Q ss_pred CCcCcccCCCC-C-CCCCEEEecCCCceeccccccC
Q 002891 459 PRSCDICRRSE-T-ILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 459 ~~~CsVC~d~E-~-~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
...|+||...= . ..-.-+.|.=|+..||..||..
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 46899998741 1 2236688999999999999854
No 140
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=32.38 E-value=17 Score=30.91 Aligned_cols=46 Identities=9% Similarity=-0.153 Sum_probs=35.6
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhHHHHHH--HHHHhhHHHHhhhhcchhhHHHh
Q 002891 296 PTDEVEGEIIYFQHRLLGNAFSRKRLADNLVCK--AVKTLNQEIDVARGRRWDAVLVN 351 (870)
Q Consensus 296 P~de~e~Ei~~~q~~Ll~~~~~~k~~~~~lv~e--V~k~l~~E~~~~~~r~~d~~~~n 351 (870)
...|+++|+..|+..|...+-... .|.+ |..+...++.+++ +.|+.
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~-----~I~~~~v~~Kt~~~~v~fY-----Y~wKk 55 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFN-----DIRQDFLPWKSLTSIIEYY-----YMWKT 55 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHH-----HHHHTTCSSSCHHHHHHHH-----HHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCccHH-----HHHHHHcCCCCHHHHHHHH-----HhhcC
Confidence 467999999999999999988533 2333 5668889999998 66653
No 141
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=32.02 E-value=8.5 Score=34.85 Aligned_cols=34 Identities=24% Similarity=0.528 Sum_probs=27.9
Q ss_pred EEEecCCCceeccccccCCC--------CC-CCceecccchhh
Q 002891 475 ILICSGCKVAVHLDCYRNAK--------ES-TGPWYCELCEEL 508 (870)
Q Consensus 475 IV~Cd~C~IaVHq~CYGi~~--------ip-eg~WLCd~C~~~ 508 (870)
||.||.|.--+|-.|-|+.. .| ...|.|..|...
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 68999999999999998852 34 457999999764
No 142
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=31.99 E-value=33 Score=34.52 Aligned_cols=71 Identities=14% Similarity=0.195 Sum_probs=41.3
Q ss_pred ccCCCCCCCCCEEEecCCCceeccccccCCCCCCCceecccchhhccCCCCCCCCCCccCCCCcccccccCCCCC-CCcc
Q 002891 464 ICRRSETILNPILICSGCKVAVHLDCYRNAKESTGPWYCELCEELLSSRSSGAPSVNFWEKPYFVAECSLCGGTT-GAFR 542 (870)
Q Consensus 464 VC~d~E~~~N~IV~Cd~C~IaVHq~CYGi~~ipeg~WLCd~C~~~~s~~~s~q~~vn~~~~p~~~~~C~LCp~~g-GALK 542 (870)
-|+..-...-.+|+|++|..-||..|.+...-+ |... +. .....|..|...+ .-|+
T Consensus 9 YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~--------~lp~---------~~------fY~F~C~~C~~~g~E~f~ 65 (177)
T 3rsn_A 9 DEENGRQLGEVELQCGICTKWFTADTFGIDTSS--------CLPF---------MT------NYSFHCNVCHHSGNTYFL 65 (177)
T ss_dssp --CTTCCTTSCEEECTTTCCEEEGGGGTCCCTT--------CCTT---------CC------SEEEECTTTSTTSSCEEE
T ss_pred EcCCCCCCCceeEeeccccceecHHHhcccccC--------cccc---------ce------eEEEEccccCCCCcceeE
Confidence 455422234579999999999999998754311 1100 00 1255677776644 3355
Q ss_pred cccCCceeeee-ccccc
Q 002891 543 KSANGQWVHAF-CAEWV 558 (870)
Q Consensus 543 ~Tsdg~WVHVv-CALWi 558 (870)
+. .-.|+|+. .|||+
T Consensus 66 R~-~~~w~~v~~laLyN 81 (177)
T 3rsn_A 66 RK-QANLKEMCLSALAN 81 (177)
T ss_dssp EC-CCCHHHHHHHHHHH
T ss_pred ec-cCCHHHHHHHHHHh
Confidence 43 44699984 46666
No 143
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=31.95 E-value=2.8 Score=34.65 Aligned_cols=50 Identities=22% Similarity=0.381 Sum_probs=27.5
Q ss_pred CCCCcCcccCCCCCCCCCEEEe--cCCCceeccccccCCCCCCCceecccchh
Q 002891 457 EHPRSCDICRRSETILNPILIC--SGCKVAVHLDCYRNAKESTGPWYCELCEE 507 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~C--d~C~IaVHq~CYGi~~ipeg~WLCd~C~~ 507 (870)
+....|-||+.... ...+.-| .+.--.||+.|.--=....+.+.|+.|..
T Consensus 4 ~~~~~CrIC~~~~~-~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~ 55 (60)
T 1vyx_A 4 EDVPVCWICNEELG-NERFRACGCTGELENVHRSCLSTWLTISRNTACQICGV 55 (60)
T ss_dssp CSCCEETTTTEECS-CCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCC
T ss_pred CCCCEeEEeecCCC-CceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCC
Confidence 34568999997432 1123343 34444999999632111123466666654
No 144
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=31.62 E-value=34 Score=26.14 Aligned_cols=34 Identities=21% Similarity=0.447 Sum_probs=23.4
Q ss_pred CCCcCcccCCCCCCCCCEEEecCCCceecccccc
Q 002891 458 HPRSCDICRRSETILNPILICSGCKVAVHLDCYR 491 (870)
Q Consensus 458 ~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG 491 (870)
....|.||.+.-...+..+..-.|+=.+|..|..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~ 37 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYE 37 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHH
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHH
Confidence 3467999997422234456667788888888863
No 145
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=31.16 E-value=33 Score=30.70 Aligned_cols=35 Identities=23% Similarity=0.647 Sum_probs=28.5
Q ss_pred CCEEEecCCCc-eeccccccCCCCCCCceecccchhh
Q 002891 473 NPILICSGCKV-AVHLDCYRNAKESTGPWYCELCEEL 508 (870)
Q Consensus 473 N~IV~Cd~C~I-aVHq~CYGi~~ipeg~WLCd~C~~~ 508 (870)
-+||.|..|+- .+|..|..+. .....|.|..|...
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~-~~~~~weC~~C~~v 79 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLR-PNSKKWECNECLPA 79 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCC-TTCSCCCCTTTSCC
T ss_pred EEEEeCcccCCchhHHHHhCCc-CCCCCEECCcCccc
Confidence 47999999985 6999998754 34678999999864
No 146
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=28.51 E-value=23 Score=31.43 Aligned_cols=60 Identities=13% Similarity=0.364 Sum_probs=37.4
Q ss_pred eeeeccccccceeeccCCcCccccccccCCCCcccccccCC-CceeeecCCCCCCccccccccccC
Q 002891 550 VHAFCAEWVFESTFRRGQVNPVAGMEAFPKGIDVCCICRHK-HGICIKCNYGNCQTTFHPTCARSA 614 (870)
Q Consensus 550 VHVvCALWiPEv~f~n~~mepVeGIesI~k~k~~CsIC~~~-~GAcIqCs~~~C~~aFH~tCA~~a 614 (870)
.|..|+.+-.++.-..-.-.++. + .......|.+|+.. .|-.-.|. .|...+|+.||...
T Consensus 19 lhe~Ca~lP~~i~Hp~Hp~H~L~-L--~~~~~~~C~~C~~~~~~~~Y~C~--~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 19 YDEIAKDWPKKVKHVLHEEHELE-L--TRVQVYTCDKCEEEGTIWSYHCD--ECDFDLHAKCALNE 79 (89)
T ss_dssp HHHHTSSSCSEECCSTTTTSCEE-E--ECCSSCCCTTTSCCCCSCEEECT--TTCCCCCHHHHHCS
T ss_pred HhHHHHcCCceecCCCCCCCccE-E--eeCCCeEeCCCCCcCCCcEEEcC--CCCCeEcHHhcCCC
Confidence 67788876655543210011111 1 11124689999986 45556798 89999999999754
No 147
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=23.81 E-value=45 Score=29.51 Aligned_cols=30 Identities=23% Similarity=0.733 Sum_probs=24.4
Q ss_pred CCcCcccCCCCCCCCCEEEecC--CCceeccccc
Q 002891 459 PRSCDICRRSETILNPILICSG--CKVAVHLDCY 490 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd~--C~IaVHq~CY 490 (870)
.+.|.+|.... .+.-|.|.. |..++|..|-
T Consensus 17 ~l~C~iC~~~~--~GAciqC~~~~C~~~fHv~CA 48 (87)
T 2lq6_A 17 KLTCYLCKQKG--VGASIQCHKANCYTAFHVTCA 48 (87)
T ss_dssp CCCBTTTTBCC--SSCEEECSCTTTCCEEEHHHH
T ss_pred cCCCcCCCCCC--CcEeEecCCCCCCCcCcHHHH
Confidence 47899997532 368899985 9999999996
No 148
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=22.40 E-value=19 Score=32.46 Aligned_cols=16 Identities=25% Similarity=0.887 Sum_probs=14.4
Q ss_pred eeecCCCCCCcccccccc
Q 002891 594 CIKCNYGNCQTTFHPTCA 611 (870)
Q Consensus 594 cIqCs~~~C~~aFH~tCA 611 (870)
+|+|. .|..|||..|-
T Consensus 2 mi~c~--~c~~w~H~~c~ 17 (140)
T 2ku7_A 2 MMQCG--KCDRWVHSKCE 17 (140)
T ss_dssp CCCCS--CCSSCHHHHHC
T ss_pred ccccc--cCCCccCCccc
Confidence 68899 99999999995
No 149
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=22.19 E-value=38 Score=37.90 Aligned_cols=33 Identities=24% Similarity=0.698 Sum_probs=26.3
Q ss_pred CCcCcccCCCC-CCCCCEEEecCCCceecccccc
Q 002891 459 PRSCDICRRSE-TILNPILICSGCKVAVHLDCYR 491 (870)
Q Consensus 459 ~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYG 491 (870)
...|+.|...= +...+-+.|..|++.+|..|..
T Consensus 220 pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~ 253 (463)
T 3cxl_A 220 PHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSK 253 (463)
T ss_dssp CCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHT
T ss_pred CCcchhhhhhhhhHHhcCeeccccCccccccccc
Confidence 46899998742 2235789999999999999974
No 150
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=22.12 E-value=29 Score=35.91 Aligned_cols=31 Identities=23% Similarity=0.615 Sum_probs=26.3
Q ss_pred CcccccccCCCceeeecCCCCCCcccccccccc
Q 002891 581 IDVCCICRHKHGICIKCNYGNCQTTFHPTCARS 613 (870)
Q Consensus 581 k~~CsIC~~~~GAcIqCs~~~C~~aFH~tCA~~ 613 (870)
...|.+|+....-.+.|. +|...||..|...
T Consensus 180 i~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 180 VKICNICHSLLIQGQSCE--TCGIRMHLPCVAK 210 (238)
T ss_dssp CCBCTTTCSBCSSCEECS--SSCCEECHHHHHH
T ss_pred CCcCcchhhHHhCCcccC--ccChHHHHHHHHH
Confidence 578999998766668898 5999999999965
No 151
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.63 E-value=44 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=22.8
Q ss_pred CCCCcCcccCCCCCCCCCEEEecCCCceecccccc
Q 002891 457 EHPRSCDICRRSETILNPILICSGCKVAVHLDCYR 491 (870)
Q Consensus 457 e~~~~CsVC~d~E~~~N~IV~Cd~C~IaVHq~CYG 491 (870)
++...|.||++.-. ....+..-.|+=.+|..|..
T Consensus 21 ~~~~~C~IC~~~~~-~~~~~~~l~C~H~fh~~Ci~ 54 (75)
T 1x4j_A 21 SEQTLCVVCMCDFE-SRQLLRVLPCNHEFHAKCVD 54 (75)
T ss_dssp SSCCEETTTTEECC-BTCEEEEETTTEEEETTHHH
T ss_pred CCCCCCeECCcccC-CCCeEEEECCCCHhHHHHHH
Confidence 34578999996322 23345555699889999963
No 152
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=20.87 E-value=43 Score=39.03 Aligned_cols=35 Identities=29% Similarity=0.641 Sum_probs=27.5
Q ss_pred CCCcCcccCCCC-CCCCCEEEecCCCceeccccccC
Q 002891 458 HPRSCDICRRSE-TILNPILICSGCKVAVHLDCYRN 492 (870)
Q Consensus 458 ~~~~CsVC~d~E-~~~N~IV~Cd~C~IaVHq~CYGi 492 (870)
....|++|...- +...+=+.|.-|++.||..|...
T Consensus 112 ~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~ 147 (674)
T 3pfq_A 112 SPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMN 147 (674)
T ss_dssp SCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSS
T ss_pred CCCCCCccccccchhhcCccccccCCcchhhhhhhc
Confidence 346899998643 23457899999999999999754
No 153
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=20.03 E-value=22 Score=35.26 Aligned_cols=45 Identities=24% Similarity=0.706 Sum_probs=33.9
Q ss_pred CCcCcccCCCCCCCCCEEEec--CCCceeccccccCC-------C-CCCCceecccchh
Q 002891 459 PRSCDICRRSETILNPILICS--GCKVAVHLDCYRNA-------K-ESTGPWYCELCEE 507 (870)
Q Consensus 459 ~~~CsVC~d~E~~~N~IV~Cd--~C~IaVHq~CYGi~-------~-ipeg~WLCd~C~~ 507 (870)
+.+|.+|.+ ++.++.|+ .|...+=..|.-.. . ....+|.|-.|..
T Consensus 79 ~~yC~wC~~----Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 79 QSYCTICCG----GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp BSSCTTTSC----CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred cceeeEecC----CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 468999987 57999999 79998888886321 1 2357888888864
Done!