Query 002892
Match_columns 870
No_of_seqs 793 out of 5589
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 05:37:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.7E-67 2.3E-71 628.5 31.3 515 3-532 138-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.3E-61 4.3E-66 582.6 28.6 489 7-499 92-699 (768)
3 3t6q_A CD180 antigen; protein- 100.0 1.2E-56 4.1E-61 527.9 35.8 487 6-506 26-572 (606)
4 1ziw_A TOLL-like receptor 3; i 100.0 6.1E-56 2.1E-60 529.0 35.5 511 6-518 18-624 (680)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-55 9.8E-60 523.2 35.5 503 3-507 37-636 (680)
6 3t6q_A CD180 antigen; protein- 100.0 1.8E-54 6.1E-59 509.4 31.4 488 17-519 14-563 (606)
7 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-54 3.8E-59 511.2 29.0 470 6-498 25-563 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 2.2E-54 7.4E-59 508.7 29.4 450 3-473 44-562 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-53 4.8E-58 518.1 34.1 473 13-505 22-571 (844)
10 2z63_A TOLL-like receptor 4, v 100.0 3.2E-51 1.1E-55 478.4 33.8 481 6-506 21-544 (570)
11 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-52 4.7E-57 439.3 14.9 260 584-865 12-290 (299)
12 3omv_A RAF proto-oncogene seri 100.0 4.9E-52 1.7E-56 434.5 18.8 265 582-866 33-302 (307)
13 3j0a_A TOLL-like receptor 5; m 100.0 3.9E-51 1.3E-55 496.6 28.0 478 18-518 7-562 (844)
14 4aoj_A High affinity nerve gro 100.0 7.6E-52 2.6E-56 439.9 18.5 259 585-865 41-320 (329)
15 2z81_A CD282 antigen, TOLL-lik 100.0 7.5E-51 2.6E-55 472.7 24.2 486 6-507 19-524 (549)
16 4gt4_A Tyrosine-protein kinase 100.0 1.1E-51 3.6E-56 434.5 14.5 257 585-863 26-305 (308)
17 4fih_A Serine/threonine-protei 100.0 6.6E-50 2.3E-54 423.4 18.4 250 584-857 73-323 (346)
18 4b9d_A Serine/threonine-protei 100.0 1.7E-49 5.9E-54 420.8 20.1 249 585-857 24-276 (350)
19 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-49 5.1E-54 419.5 18.5 256 584-865 57-317 (336)
20 3hmm_A TGF-beta receptor type- 100.0 1.4E-49 4.7E-54 420.1 17.1 270 585-866 3-299 (303)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-49 5.2E-54 414.1 16.1 248 585-856 32-283 (311)
22 4eco_A Uncharacterized protein 100.0 3.1E-50 1.1E-54 472.3 12.0 439 15-497 81-604 (636)
23 4ase_A Vascular endothelial gr 100.0 2.6E-49 9E-54 423.6 17.7 267 578-865 57-348 (353)
24 2z7x_B TOLL-like receptor 1, v 100.0 6.1E-49 2.1E-53 453.1 20.3 463 7-520 15-510 (520)
25 2z63_A TOLL-like receptor 4, v 100.0 6.6E-48 2.2E-52 450.4 29.2 483 16-520 8-535 (570)
26 3fpq_A Serine/threonine-protei 100.0 2.2E-48 7.4E-53 404.0 22.0 244 588-857 29-282 (290)
27 4fie_A Serine/threonine-protei 100.0 1.1E-48 3.8E-53 424.3 18.7 250 584-857 150-400 (423)
28 4ecn_A Leucine-rich repeat pro 100.0 4.7E-48 1.6E-52 459.8 24.7 442 15-493 323-864 (876)
29 4eco_A Uncharacterized protein 100.0 3.7E-49 1.3E-53 463.1 13.5 434 2-474 92-605 (636)
30 3hyh_A Carbon catabolite-derep 100.0 6.3E-48 2.2E-52 396.7 20.5 246 584-857 12-262 (275)
31 2z81_A CD282 antigen, TOLL-lik 100.0 2.7E-47 9.1E-52 442.8 25.2 484 17-520 7-514 (549)
32 4g8a_A TOLL-like receptor 4; l 100.0 1.8E-46 6.2E-51 444.5 30.1 493 6-520 45-610 (635)
33 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-47 1.5E-51 437.7 21.7 454 18-518 3-483 (520)
34 3ubd_A Ribosomal protein S6 ki 100.0 4.5E-48 1.5E-52 403.4 11.6 247 585-857 24-281 (304)
35 4ecn_A Leucine-rich repeat pro 100.0 1.1E-46 3.9E-51 447.9 20.6 428 2-469 334-864 (876)
36 4g31_A Eukaryotic translation 100.0 3.1E-46 1.1E-50 392.0 19.9 249 585-857 5-279 (299)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.1E-46 2.1E-50 431.5 22.9 463 14-499 30-516 (562)
38 3v47_A TOLL-like receptor 5B a 100.0 6.2E-44 2.1E-48 404.3 30.0 401 19-507 14-422 (455)
39 4g8a_A TOLL-like receptor 4; l 100.0 7.7E-44 2.6E-48 421.9 31.3 495 4-518 17-582 (635)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.3E-44 2.8E-48 413.6 24.1 458 38-518 30-512 (562)
41 4f9c_A Cell division cycle 7-r 100.0 8.3E-44 2.8E-48 384.1 19.3 268 581-857 17-352 (361)
42 4b99_A Mitogen-activated prote 100.0 7.2E-44 2.5E-48 388.5 17.5 268 584-857 53-344 (398)
43 3v47_A TOLL-like receptor 5B a 100.0 5E-42 1.7E-46 388.6 29.8 373 15-474 30-413 (455)
44 3v5w_A G-protein coupled recep 100.0 1.9E-42 6.6E-47 391.6 23.2 248 584-857 188-449 (689)
45 3uto_A Twitchin; kinase, muscl 100.0 1.4E-42 4.7E-47 397.9 20.9 252 584-857 156-410 (573)
46 1jl5_A Outer protein YOPM; leu 100.0 4.8E-42 1.6E-46 384.8 24.5 396 7-498 3-416 (454)
47 2qkw_B Protein kinase; three-h 100.0 2.1E-42 7.3E-47 372.0 20.0 283 575-865 29-316 (321)
48 3soc_A Activin receptor type-2 100.0 4.1E-42 1.4E-46 369.5 19.4 276 583-866 22-320 (322)
49 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-41 4E-46 364.4 20.1 263 584-866 9-284 (310)
50 3uim_A Brassinosteroid insensi 100.0 1.8E-41 6.1E-46 365.9 21.2 284 572-861 17-308 (326)
51 3fxz_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 356.9 21.5 251 583-857 18-269 (297)
52 2psq_A Fibroblast growth facto 100.0 2.5E-41 8.7E-46 369.8 20.2 262 583-866 79-366 (370)
53 3cbl_A C-FES, proto-oncogene t 100.0 4.2E-42 1.4E-46 377.5 13.3 262 583-866 112-376 (377)
54 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.4E-46 360.7 15.2 276 584-866 9-293 (295)
55 3p86_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 359.5 17.4 264 580-867 32-301 (309)
56 2nru_A Interleukin-1 receptor- 100.0 6.6E-40 2.2E-44 350.5 27.2 281 572-864 12-306 (307)
57 3kul_A Ephrin type-A receptor 100.0 4.4E-41 1.5E-45 361.6 17.5 261 584-866 48-315 (325)
58 1jl5_A Outer protein YOPM; leu 100.0 3.9E-41 1.3E-45 377.4 17.2 373 32-498 5-393 (454)
59 4hcu_A Tyrosine-protein kinase 100.0 4.5E-41 1.5E-45 352.1 15.3 258 584-865 9-267 (269)
60 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.4E-41 1.8E-45 351.3 15.8 259 583-865 6-265 (268)
61 3bz5_A Internalin-J, INLJ; leu 100.0 7.8E-40 2.7E-44 367.2 26.2 362 5-499 32-393 (457)
62 2c30_A Serine/threonine-protei 100.0 4E-40 1.4E-44 353.5 22.0 260 574-857 24-294 (321)
63 3lb7_A RAF proto-oncogene seri 100.0 2.5E-40 8.6E-45 352.7 20.2 263 583-866 34-302 (307)
64 3fe3_A MAP/microtubule affinit 100.0 3.9E-40 1.3E-44 353.6 21.4 250 581-857 11-264 (328)
65 2qol_A Ephrin receptor; recept 100.0 1E-40 3.5E-45 365.2 16.5 261 584-866 44-311 (373)
66 1tki_A Titin; serine kinase, m 100.0 6.4E-40 2.2E-44 351.5 20.8 252 583-857 3-257 (321)
67 3zgw_A Maternal embryonic leuc 100.0 2.3E-40 8E-45 357.0 17.4 253 581-858 6-261 (347)
68 3vhe_A Vascular endothelial gr 100.0 3E-40 1E-44 361.5 18.5 272 574-866 11-357 (359)
69 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 349.4 16.5 260 582-865 21-281 (283)
70 3tt0_A Basic fibroblast growth 100.0 4E-40 1.4E-44 362.7 18.7 263 582-866 66-354 (382)
71 3poz_A Epidermal growth factor 100.0 2.2E-40 7.7E-45 356.8 15.6 259 584-865 14-279 (327)
72 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-40 4E-45 364.3 13.4 262 584-867 70-348 (367)
73 3og7_A AKAP9-BRAF fusion prote 100.0 4.8E-40 1.7E-44 347.9 17.6 264 581-864 20-288 (289)
74 1luf_A Muscle-specific tyrosin 100.0 1.6E-40 5.6E-45 361.3 14.2 266 580-867 42-338 (343)
75 2ivs_A Proto-oncogene tyrosine 100.0 4.4E-40 1.5E-44 353.2 17.2 261 583-865 21-312 (314)
76 3tki_A Serine/threonine-protei 100.0 5.2E-40 1.8E-44 352.7 17.4 253 584-857 6-261 (323)
77 4eqm_A Protein kinase; transfe 100.0 8.4E-40 2.9E-44 346.6 18.4 262 584-865 10-276 (294)
78 3op5_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 356.5 20.4 271 583-866 33-331 (364)
79 3q4u_A Activin receptor type-1 100.0 2.5E-39 8.7E-44 345.0 22.0 266 583-862 6-300 (301)
80 3niz_A Rhodanese family protei 100.0 2.1E-39 7.3E-44 346.3 21.4 270 581-857 17-300 (311)
81 3qup_A Tyrosine-protein kinase 100.0 3.3E-40 1.1E-44 355.5 15.1 266 579-866 17-300 (323)
82 1o6l_A RAC-beta serine/threoni 100.0 2.8E-39 9.5E-44 347.7 22.1 248 584-857 4-260 (337)
83 1csn_A Casein kinase-1; phosph 100.0 2.5E-39 8.7E-44 344.4 21.4 265 583-867 8-286 (298)
84 2yab_A Death-associated protei 100.0 2.6E-39 8.8E-44 351.2 21.6 252 583-857 10-272 (361)
85 1o6v_A Internalin A; bacterial 100.0 2.5E-38 8.6E-43 358.3 30.6 346 38-495 45-390 (466)
86 3mdy_A Bone morphogenetic prot 100.0 1.2E-38 4E-43 345.8 26.4 274 580-867 32-334 (337)
87 2izr_A Casein kinase I isoform 100.0 2.2E-39 7.6E-44 349.8 20.2 262 584-866 8-283 (330)
88 3t9t_A Tyrosine-protein kinase 100.0 6.1E-40 2.1E-44 343.2 15.1 258 584-865 7-265 (267)
89 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-39 9.7E-44 346.7 20.6 264 582-866 20-309 (313)
90 1mp8_A Focal adhesion kinase 1 100.0 1E-39 3.5E-44 344.0 16.5 261 582-866 12-278 (281)
91 2id5_A Lingo-1, leucine rich r 100.0 8.3E-39 2.8E-43 364.1 25.0 320 42-469 14-333 (477)
92 1rjb_A FL cytokine receptor; k 100.0 2.6E-39 9E-44 351.7 19.6 263 582-865 42-335 (344)
93 1kob_A Twitchin; kinase, intra 100.0 3E-39 1E-43 353.9 20.1 253 583-857 49-304 (387)
94 2eva_A TAK1 kinase - TAB1 chim 100.0 6.3E-39 2.2E-43 342.2 21.8 256 584-866 7-265 (307)
95 2pvf_A Fibroblast growth facto 100.0 1.8E-39 6.2E-44 351.1 17.7 262 583-866 33-320 (334)
96 4e5w_A Tyrosine-protein kinase 100.0 1.2E-39 4.2E-44 347.5 16.2 270 585-864 21-302 (302)
97 3kex_A Receptor tyrosine-prote 100.0 3.5E-40 1.2E-44 355.1 11.9 259 584-865 12-277 (325)
98 3c0i_A Peripheral plasma membr 100.0 6.2E-39 2.1E-43 348.6 21.8 252 584-857 23-286 (351)
99 4f0f_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 341.2 19.2 252 584-862 18-287 (287)
100 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-39 7.4E-44 364.1 18.3 254 583-866 191-447 (450)
101 2y0a_A Death-associated protei 100.0 4.8E-39 1.6E-43 345.9 20.2 251 584-857 10-271 (326)
102 4euu_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 342.8 22.9 273 584-862 8-307 (319)
103 1ob3_A PFPK5, cell division co 100.0 2.5E-39 8.6E-44 342.3 17.6 266 585-857 2-280 (288)
104 3o0g_A Cell division protein k 100.0 5.5E-39 1.9E-43 340.5 20.2 267 585-857 2-282 (292)
105 3lxl_A Tyrosine-protein kinase 100.0 1E-39 3.4E-44 352.2 14.6 277 584-867 22-306 (327)
106 2bdw_A Hypothetical protein K1 100.0 5.3E-39 1.8E-43 350.0 20.4 253 583-858 27-285 (362)
107 3soa_A Calcium/calmodulin-depe 100.0 7.1E-39 2.4E-43 356.9 21.8 254 582-857 8-267 (444)
108 1qcf_A Haematopoetic cell kina 100.0 5.3E-40 1.8E-44 369.8 12.8 259 581-864 184-444 (454)
109 4aw2_A Serine/threonine-protei 100.0 2.9E-39 9.8E-44 358.5 18.5 261 578-857 67-338 (437)
110 3txo_A PKC-L, NPKC-ETA, protei 100.0 3E-39 1E-43 349.9 18.0 249 583-857 21-280 (353)
111 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.3E-39 8E-44 347.9 16.7 247 583-857 7-258 (336)
112 3dtc_A Mitogen-activated prote 100.0 2.1E-39 7.2E-44 339.9 15.9 255 583-862 5-271 (271)
113 3lzb_A Epidermal growth factor 100.0 1.5E-39 5.1E-44 350.0 15.1 259 584-865 14-279 (327)
114 3lxp_A Non-receptor tyrosine-p 100.0 6.1E-39 2.1E-43 344.3 19.7 270 587-867 33-313 (318)
115 2w1i_A JAK2; chromosomal rearr 100.0 2.1E-39 7.1E-44 349.4 16.0 277 584-867 40-325 (326)
116 2xir_A Vascular endothelial gr 100.0 5.7E-39 1.9E-43 344.8 19.2 270 576-866 18-312 (316)
117 3g2f_A Bone morphogenetic prot 100.0 2.7E-39 9.4E-44 350.4 16.4 278 583-867 11-321 (336)
118 3p1a_A MYT1 kinase, membrane-a 100.0 5.2E-39 1.8E-43 343.5 18.4 244 585-857 57-304 (311)
119 3kmu_A ILK, integrin-linked ki 100.0 4E-39 1.4E-43 337.8 17.1 253 583-864 8-270 (271)
120 3brb_A Proto-oncogene tyrosine 100.0 3.8E-39 1.3E-43 345.5 17.1 267 578-866 27-310 (313)
121 1u59_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 339.7 17.9 262 584-868 8-276 (287)
122 4fr4_A YANK1, serine/threonine 100.0 2.4E-38 8.3E-43 345.2 23.5 248 584-856 14-270 (384)
123 3c1x_A Hepatocyte growth facto 100.0 1.7E-39 5.9E-44 354.9 14.4 260 586-867 90-358 (373)
124 2x4f_A Myosin light chain kina 100.0 8.2E-39 2.8E-43 349.8 19.8 246 590-857 94-342 (373)
125 3cc6_A Protein tyrosine kinase 100.0 4.8E-39 1.7E-43 338.9 17.2 260 583-866 10-275 (281)
126 1mqb_A Ephrin type-A receptor 100.0 6.3E-39 2.1E-43 346.3 18.4 262 584-867 43-312 (333)
127 1p4o_A Insulin-like growth fac 100.0 1.3E-39 4.5E-44 350.7 12.9 267 578-866 18-301 (322)
128 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-38 7.7E-43 338.3 22.3 245 584-857 5-258 (318)
129 3f66_A Hepatocyte growth facto 100.0 5.5E-39 1.9E-43 341.7 17.4 262 584-867 24-294 (298)
130 1qpc_A LCK kinase; alpha beta 100.0 2.6E-39 8.7E-44 340.7 14.6 262 580-866 8-271 (279)
131 3dbq_A Dual specificity protei 100.0 7.2E-39 2.5E-43 347.5 18.4 253 583-858 7-274 (343)
132 4dc2_A Protein kinase C IOTA t 100.0 1E-38 3.5E-43 349.4 19.6 252 584-852 51-307 (396)
133 1opk_A P150, C-ABL, proto-onco 100.0 2.8E-39 9.5E-44 367.2 15.7 258 583-864 218-478 (495)
134 3kfa_A Tyrosine-protein kinase 100.0 3E-39 1E-43 342.0 14.8 264 579-866 7-273 (288)
135 2w4o_A Calcium/calmodulin-depe 100.0 7.1E-39 2.4E-43 347.6 18.1 252 582-857 50-305 (349)
136 2vd5_A DMPK protein; serine/th 100.0 5.7E-39 1.9E-43 353.7 17.4 260 578-857 54-327 (412)
137 1xjd_A Protein kinase C, theta 100.0 7E-39 2.4E-43 345.5 17.6 250 581-856 13-268 (345)
138 2zv2_A Calcium/calmodulin-depe 100.0 4.9E-39 1.7E-43 342.0 15.6 249 584-857 12-292 (298)
139 2wqm_A Serine/threonine-protei 100.0 2.1E-38 7.2E-43 339.2 20.4 263 584-867 31-300 (310)
140 3ork_A Serine/threonine protei 100.0 3E-39 1E-43 345.7 13.8 260 583-862 10-279 (311)
141 3v8s_A RHO-associated protein 100.0 3E-39 1E-43 355.6 14.1 259 578-858 62-330 (410)
142 4fvq_A Tyrosine-protein kinase 100.0 5.4E-39 1.9E-43 340.2 15.5 253 584-865 7-276 (289)
143 3pls_A Macrophage-stimulating 100.0 1.4E-38 4.9E-43 338.6 18.6 261 586-867 22-290 (298)
144 3gni_B Strad alpha; kinase fol 100.0 2.2E-38 7.4E-43 350.3 20.7 272 583-858 23-334 (389)
145 2zmd_A Dual specificity protei 100.0 1.9E-38 6.5E-43 349.4 20.1 251 585-858 56-321 (390)
146 3qd2_B Eukaryotic translation 100.0 2.1E-38 7.1E-43 343.1 20.1 250 584-857 5-325 (332)
147 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.1E-39 1.1E-43 363.1 14.0 257 583-864 182-440 (452)
148 2i1m_A Macrophage colony-stimu 100.0 1.7E-38 5.8E-43 343.7 19.1 266 581-867 42-329 (333)
149 3a8x_A Protein kinase C IOTA t 100.0 3E-38 1E-42 341.5 20.9 252 584-852 8-264 (345)
150 3gxj_A TGF-beta receptor type- 100.0 4.7E-40 1.6E-44 351.0 6.7 269 584-866 2-299 (303)
151 2id5_A Lingo-1, leucine rich r 100.0 9.5E-38 3.3E-42 355.4 26.0 323 17-447 13-335 (477)
152 4hgt_A Casein kinase I isoform 100.0 2.9E-38 9.8E-43 336.0 20.3 265 583-867 7-283 (296)
153 1b6c_B TGF-B superfamily recep 100.0 6E-38 2.1E-42 340.9 23.0 273 581-867 38-339 (342)
154 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.1E-38 7.2E-43 347.2 19.5 257 581-867 61-342 (365)
155 3f3z_A Calcium/calmodulin-depe 100.0 3E-38 1E-42 332.1 20.0 251 583-857 7-261 (277)
156 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.2E-38 1.1E-42 341.7 20.6 245 584-857 40-293 (350)
157 3uzp_A CKI-delta, CKID, casein 100.0 4.4E-38 1.5E-42 334.5 21.3 265 583-867 7-283 (296)
158 2pmi_A Negative RE, cyclin-dep 100.0 2.2E-38 7.7E-43 339.6 19.1 267 584-857 4-293 (317)
159 3uc3_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 346.9 17.6 254 583-858 18-275 (361)
160 2h34_A Serine/threonine-protei 100.0 2.3E-38 7.9E-43 338.3 19.0 262 582-865 31-297 (309)
161 2i0e_A Protein kinase C-beta I 100.0 2.5E-38 8.7E-43 342.3 19.3 249 583-857 18-276 (353)
162 3cok_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 334.5 17.1 250 583-857 9-262 (278)
163 4eut_A Serine/threonine-protei 100.0 1.5E-38 5.1E-43 351.8 17.6 276 584-865 8-310 (396)
164 2yex_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 331.8 19.4 253 584-857 6-261 (276)
165 3kk8_A Calcium/calmodulin depe 100.0 6.1E-38 2.1E-42 331.2 21.3 252 583-857 4-261 (284)
166 3fdn_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 332.9 18.4 248 583-858 7-258 (279)
167 2buj_A Serine/threonine-protei 100.0 2.7E-38 9.1E-43 339.7 18.7 262 583-864 27-306 (317)
168 3is5_A Calcium-dependent prote 100.0 2.3E-38 7.7E-43 334.3 17.7 250 584-857 21-278 (285)
169 2yfx_A Tyrosine-protein kinase 100.0 1.1E-38 3.6E-43 344.2 15.1 262 583-866 28-306 (327)
170 3a62_A Ribosomal protein S6 ki 100.0 3.9E-38 1.3E-42 338.9 19.5 248 584-857 16-276 (327)
171 1u5q_A Serine/threonine protei 100.0 1.9E-38 6.5E-43 343.7 17.1 246 585-858 54-306 (348)
172 2v62_A Serine/threonine-protei 100.0 1.7E-38 5.9E-43 344.8 16.6 266 584-863 36-327 (345)
173 2y94_A 5'-AMP-activated protei 100.0 3.4E-38 1.2E-42 353.5 19.3 247 584-857 15-266 (476)
174 2a2a_A Death-associated protei 100.0 5.7E-38 2E-42 337.3 20.3 252 583-857 10-272 (321)
175 3hko_A Calcium/calmodulin-depe 100.0 2.3E-38 7.9E-43 344.5 17.3 260 579-857 20-330 (345)
176 1xbb_A Tyrosine-protein kinase 100.0 1.1E-38 3.9E-43 337.9 14.5 262 582-867 13-282 (291)
177 2jii_A Serine/threonine-protei 100.0 7.2E-39 2.5E-43 349.0 13.1 267 584-868 41-340 (352)
178 3llt_A Serine/threonine kinase 100.0 6E-38 2.1E-42 343.2 20.3 271 576-857 26-355 (360)
179 3kn6_A Ribosomal protein S6 ki 100.0 3.2E-38 1.1E-42 339.1 17.8 247 590-857 16-270 (325)
180 2ozo_A Tyrosine-protein kinase 100.0 1.9E-38 6.5E-43 368.8 17.0 258 587-867 337-601 (613)
181 1byg_A CSK, protein (C-termina 100.0 1.5E-38 5E-43 334.7 14.2 254 583-866 19-275 (278)
182 2eue_A Carbon catabolite derep 100.0 2.7E-38 9.4E-43 332.0 16.2 246 584-857 12-262 (275)
183 4agu_A Cyclin-dependent kinase 100.0 6.9E-38 2.3E-42 335.5 19.4 267 584-857 2-284 (311)
184 2ac3_A MAP kinase-interacting 100.0 4.4E-38 1.5E-42 337.8 17.9 267 584-857 11-295 (316)
185 3oz6_A Mitogen-activated prote 100.0 3.5E-38 1.2E-42 348.3 17.6 270 582-858 6-329 (388)
186 1fvr_A Tyrosine-protein kinase 100.0 3E-38 1E-42 340.6 16.6 258 584-866 24-302 (327)
187 2r5t_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 343.7 17.0 248 584-857 37-289 (373)
188 3dls_A PAS domain-containing s 100.0 2.8E-38 9.4E-43 341.0 15.7 243 583-858 22-275 (335)
189 3g33_A Cell division protein k 100.0 1.3E-37 4.5E-42 332.6 20.7 267 583-857 7-296 (308)
190 2a19_B Interferon-induced, dou 100.0 2.2E-38 7.4E-43 334.7 14.0 250 583-866 9-276 (284)
191 2j7t_A Serine/threonine-protei 100.0 2.8E-38 9.4E-43 337.1 14.8 254 582-857 16-275 (302)
192 3mtl_A Cell division protein k 100.0 2.2E-38 7.5E-43 340.8 14.1 266 585-857 2-281 (324)
193 3bhy_A Death-associated protei 100.0 1.4E-37 4.9E-42 328.2 19.8 257 585-864 5-274 (283)
194 2y7j_A Phosphorylase B kinase 100.0 2.9E-37 9.9E-42 337.2 22.8 255 580-857 89-359 (365)
195 4ejn_A RAC-alpha serine/threon 100.0 5.4E-38 1.9E-42 353.0 17.5 249 584-857 147-404 (446)
196 2h8h_A Proto-oncogene tyrosine 100.0 1.3E-38 4.3E-43 365.2 12.4 258 582-864 264-523 (535)
197 3eqc_A Dual specificity mitoge 100.0 4.7E-38 1.6E-42 344.0 16.1 264 584-857 32-324 (360)
198 1u46_A ACK-1, activated CDC42 100.0 2.6E-38 8.8E-43 335.4 13.4 260 584-865 17-285 (291)
199 1t4h_A Serine/threonine-protei 100.0 5E-37 1.7E-41 325.1 23.1 247 585-857 26-282 (290)
200 3sv0_A Casein kinase I-like; t 100.0 2.8E-37 9.6E-42 346.7 22.3 263 583-865 5-279 (483)
201 2acx_A G protein-coupled recep 100.0 2.5E-37 8.5E-42 350.5 21.9 251 583-857 182-444 (576)
202 4fl3_A Tyrosine-protein kinase 100.0 5.8E-38 2E-42 365.4 17.1 252 591-866 375-633 (635)
203 1nxk_A MAP kinase-activated pr 100.0 1.8E-37 6.2E-42 342.5 20.1 249 584-858 60-322 (400)
204 2rku_A Serine/threonine-protei 100.0 1E-37 3.5E-42 331.1 17.5 249 584-858 14-266 (294)
205 1o6v_A Internalin A; bacterial 100.0 2E-36 6.9E-41 342.7 29.1 347 12-446 43-389 (466)
206 2jam_A Calcium/calmodulin-depe 100.0 1.6E-37 5.3E-42 331.4 18.8 251 583-857 7-261 (304)
207 3com_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 332.6 19.5 252 582-857 26-278 (314)
208 1ua2_A CAK, cell division prot 100.0 7.2E-38 2.5E-42 340.1 16.3 271 580-857 5-291 (346)
209 3ttj_A Mitogen-activated prote 100.0 2.8E-37 9.6E-42 347.1 21.6 262 583-857 60-355 (464)
210 4aaa_A Cyclin-dependent kinase 100.0 7.8E-38 2.7E-42 337.8 16.3 267 584-857 24-306 (331)
211 3ll6_A Cyclin G-associated kin 100.0 9.7E-38 3.3E-42 338.6 17.1 258 583-866 26-310 (337)
212 2vgo_A Serine/threonine-protei 100.0 1.8E-37 6E-42 327.5 18.4 246 584-857 13-262 (284)
213 2qr7_A Ribosomal protein S6 ki 100.0 4.8E-38 1.6E-42 339.4 14.1 250 583-857 20-277 (342)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.6E-38 2.3E-42 337.8 15.1 268 582-857 31-318 (329)
215 2clq_A Mitogen-activated prote 100.0 4.8E-37 1.6E-41 326.3 21.5 251 585-857 22-278 (295)
216 3i6u_A CDS1, serine/threonine- 100.0 1.4E-37 4.8E-42 346.0 18.1 253 582-857 132-399 (419)
217 2owb_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 336.9 16.7 248 584-857 40-291 (335)
218 3a7i_A MST3 kinase, serine/thr 100.0 1.6E-37 5.4E-42 331.3 17.6 250 583-858 20-271 (303)
219 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.4E-37 1.2E-41 348.9 20.3 253 584-857 184-448 (543)
220 3mwu_A Calmodulin-domain prote 100.0 4.1E-37 1.4E-41 349.9 20.9 252 583-858 20-277 (486)
221 2h6d_A 5'-AMP-activated protei 100.0 2.3E-37 7.8E-42 325.3 17.2 249 583-858 9-262 (276)
222 2w5a_A Serine/threonine-protei 100.0 7.8E-38 2.7E-42 329.5 13.5 256 584-860 5-270 (279)
223 3nsz_A CK II alpha, casein kin 100.0 3.6E-37 1.2E-41 332.9 19.0 261 584-857 35-319 (330)
224 3fme_A Dual specificity mitoge 100.0 3.1E-37 1.1E-41 326.9 17.9 251 583-857 5-266 (290)
225 3rp9_A Mitogen-activated prote 100.0 3.6E-37 1.2E-41 348.0 19.5 195 584-783 52-280 (458)
226 3cek_A Dual specificity protei 100.0 2E-37 7E-42 332.0 16.4 261 575-858 18-293 (313)
227 3lm5_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 334.3 15.8 260 576-857 19-287 (327)
228 2vwi_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 332.6 14.2 263 581-857 11-287 (303)
229 3pg1_A Mitogen-activated prote 100.0 2.8E-37 9.7E-42 338.2 17.6 274 576-857 13-316 (362)
230 3mi9_A Cell division protein k 100.0 5.1E-37 1.8E-41 334.5 19.5 269 584-857 16-311 (351)
231 3byv_A Rhoptry kinase; malaria 100.0 2.9E-38 1E-42 347.3 9.7 248 584-865 72-369 (377)
232 3q5i_A Protein kinase; CDPK, m 100.0 8.5E-37 2.9E-41 348.7 22.2 251 583-857 34-301 (504)
233 2pml_X PFPK7, Ser/Thr protein 100.0 1E-37 3.5E-42 339.9 13.8 265 584-857 30-322 (348)
234 1x8b_A WEE1HU, WEE1-like prote 100.0 3.8E-37 1.3E-41 326.0 17.3 244 583-857 9-279 (289)
235 3bz5_A Internalin-J, INLJ; leu 100.0 6.9E-36 2.3E-40 335.2 28.2 343 25-495 28-370 (457)
236 3lij_A Calcium/calmodulin depe 100.0 5.4E-37 1.9E-41 349.4 19.4 251 583-857 35-291 (494)
237 3q60_A ROP5B; pseudokinase, tr 100.0 9.3E-38 3.2E-42 342.7 12.5 254 584-857 61-352 (371)
238 3o6n_A APL1; leucine-rich repe 100.0 2E-36 6.7E-41 334.9 23.2 335 86-520 44-378 (390)
239 3an0_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 332.9 18.2 253 582-857 48-310 (340)
240 2wtk_C Serine/threonine-protei 100.0 7.5E-37 2.6E-41 326.4 19.0 252 583-858 3-264 (305)
241 3nyv_A Calmodulin-domain prote 100.0 2.9E-37 9.9E-42 351.4 16.8 250 584-857 25-281 (484)
242 3n9x_A Phosphotransferase; mal 100.0 8.8E-37 3E-41 341.2 20.3 201 583-788 24-253 (432)
243 2ycf_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 329.6 18.2 252 583-857 8-274 (322)
244 1cm8_A Phosphorylated MAP kina 100.0 9.9E-37 3.4E-41 333.0 20.1 263 583-857 23-307 (367)
245 2r3i_A Cell division protein k 100.0 9.5E-37 3.2E-41 324.7 19.4 266 585-857 3-283 (299)
246 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.6E-38 8.8E-43 340.2 7.3 266 577-866 25-304 (319)
247 2x7f_A TRAF2 and NCK-interacti 100.0 2.2E-37 7.5E-42 333.9 14.6 259 575-857 14-286 (326)
248 1phk_A Phosphorylase kinase; g 100.0 1.2E-36 4.1E-41 323.7 19.9 253 582-857 14-283 (298)
249 2j0j_A Focal adhesion kinase 1 100.0 3.5E-37 1.2E-41 360.2 17.2 262 581-866 386-653 (656)
250 2xrw_A Mitogen-activated prote 100.0 2.8E-36 9.4E-41 330.6 23.2 260 584-857 24-318 (371)
251 1vzo_A Ribosomal protein S6 ki 100.0 2.2E-37 7.7E-42 336.9 14.3 254 584-858 53-322 (355)
252 3eb0_A Putative uncharacterize 100.0 5.7E-37 2E-41 337.8 16.8 265 581-857 3-321 (383)
253 3kvw_A DYRK2, dual specificity 100.0 1.4E-36 4.9E-41 338.7 20.0 198 583-790 95-302 (429)
254 3qyz_A Mitogen-activated prote 100.0 1.3E-36 4.5E-41 332.6 18.3 271 580-857 22-313 (364)
255 3pfq_A PKC-B, PKC-beta, protei 100.0 1.6E-36 5.6E-41 355.7 20.2 249 583-857 339-597 (674)
256 3oja_B Anopheles plasmodium-re 100.0 3.4E-36 1.2E-40 351.2 22.8 335 86-520 50-384 (597)
257 1zy4_A Serine/threonine-protei 100.0 1.1E-36 3.9E-41 324.8 17.2 253 583-857 4-283 (303)
258 1wak_A Serine/threonine-protei 100.0 1.7E-36 5.7E-41 336.9 19.2 264 584-857 36-391 (397)
259 2i6l_A Mitogen-activated prote 100.0 2.1E-36 7.2E-41 325.5 18.7 266 584-857 10-305 (320)
260 2fst_X Mitogen-activated prote 100.0 8E-37 2.7E-41 333.3 15.2 263 583-857 27-311 (367)
261 2wei_A Calmodulin-domain prote 100.0 2.8E-36 9.6E-41 318.8 18.4 252 582-857 19-276 (287)
262 1z57_A Dual specificity protei 100.0 6.4E-36 2.2E-40 324.6 21.4 265 583-858 12-329 (339)
263 2b9h_A MAP kinase FUS3, mitoge 100.0 4.2E-36 1.4E-40 327.8 17.9 268 583-857 9-305 (353)
264 4e7w_A Glycogen synthase kinas 100.0 2.9E-36 1E-40 332.6 16.8 263 584-857 39-321 (394)
265 1blx_A Cyclin-dependent kinase 100.0 3.9E-36 1.3E-40 324.2 17.4 268 582-857 8-296 (326)
266 2vx3_A Dual specificity tyrosi 100.0 1.6E-35 5.4E-40 326.2 22.4 202 581-790 50-261 (382)
267 3o6n_A APL1; leucine-rich repe 100.0 3E-35 1E-39 325.4 24.6 336 38-498 44-379 (390)
268 4exu_A Mitogen-activated prote 100.0 7.7E-36 2.6E-40 327.1 19.4 262 583-857 40-323 (371)
269 1j1b_A Glycogen synthase kinas 100.0 2.7E-36 9.3E-41 335.7 15.7 260 585-857 54-336 (420)
270 3rgf_A Cyclin-dependent kinase 100.0 3E-36 1E-40 334.7 14.7 267 585-857 20-333 (405)
271 2dyl_A Dual specificity mitoge 100.0 5.4E-36 1.9E-40 321.9 16.3 253 583-857 23-283 (318)
272 2rio_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 332.6 18.4 251 585-857 15-295 (434)
273 3e3p_A Protein kinase, putativ 100.0 9.5E-36 3.3E-40 325.9 17.4 273 578-857 16-314 (360)
274 3aln_A Dual specificity mitoge 100.0 4E-36 1.4E-40 324.1 14.1 254 584-857 21-285 (327)
275 2eu9_A Dual specificity protei 100.0 3.3E-35 1.1E-39 321.2 21.2 263 584-857 18-333 (355)
276 3fhr_A MAP kinase-activated pr 100.0 8.8E-36 3E-40 321.9 16.0 252 583-857 26-287 (336)
277 1q8y_A SR protein kinase; tran 100.0 1.4E-35 4.8E-40 326.4 17.4 264 584-857 18-333 (373)
278 3coi_A Mitogen-activated prote 100.0 9.3E-36 3.2E-40 324.7 15.1 261 584-857 23-305 (353)
279 3p23_A Serine/threonine-protei 100.0 1.3E-35 4.4E-40 330.4 16.2 250 584-857 23-283 (432)
280 3a99_A Proto-oncogene serine/t 100.0 3.1E-36 1.1E-40 323.4 10.4 243 581-857 39-293 (320)
281 4fmz_A Internalin; leucine ric 100.0 3.4E-34 1.2E-38 311.8 25.8 127 359-493 220-346 (347)
282 2iwi_A Serine/threonine-protei 100.0 8.6E-36 2.9E-40 319.2 12.7 244 580-857 26-283 (312)
283 3oja_B Anopheles plasmodium-re 100.0 1.4E-34 4.9E-39 337.5 23.2 335 37-496 49-383 (597)
284 3qa8_A MGC80376 protein; kinas 100.0 1.4E-35 4.7E-40 339.0 13.3 272 583-864 12-309 (676)
285 4fmz_A Internalin; leucine ric 100.0 6.4E-34 2.2E-38 309.6 24.1 307 35-469 40-346 (347)
286 3uqc_A Probable conserved tran 100.0 1.3E-34 4.4E-39 304.6 17.7 233 584-866 30-267 (286)
287 1ogq_A PGIP-2, polygalacturona 100.0 3.2E-34 1.1E-38 306.0 18.6 191 305-520 117-308 (313)
288 2pzi_A Probable serine/threoni 100.0 1.9E-34 6.5E-39 341.0 17.7 242 584-865 79-329 (681)
289 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-33 1.2E-37 301.4 25.2 130 361-491 194-331 (332)
290 1xku_A Decorin; proteoglycan, 100.0 1.4E-32 4.8E-37 296.5 26.4 130 361-491 193-330 (330)
291 3m2w_A MAP kinase-activated pr 100.0 2E-33 6.9E-38 298.5 18.9 231 583-857 15-256 (299)
292 2ft3_A Biglycan; proteoglycan, 100.0 4.4E-33 1.5E-37 300.6 21.7 298 6-323 18-330 (332)
293 3dzo_A Rhoptry kinase domain; 100.0 6.6E-34 2.3E-38 315.7 12.9 241 583-857 76-363 (413)
294 1xku_A Decorin; proteoglycan, 100.0 3.2E-32 1.1E-36 293.8 24.0 255 14-287 30-286 (330)
295 1z7x_W Ribonuclease inhibitor; 100.0 9.8E-37 3.4E-41 345.8 -15.2 368 14-445 2-411 (461)
296 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-32 5.2E-37 293.0 16.1 252 15-278 50-306 (313)
297 2vuw_A Serine/threonine-protei 100.0 1.1E-33 3.8E-38 305.9 6.9 243 583-856 18-329 (336)
298 1z7x_W Ribonuclease inhibitor; 100.0 3.7E-36 1.3E-40 341.1 -16.4 365 86-494 2-412 (461)
299 2z66_A Variable lymphocyte rec 100.0 4.1E-30 1.4E-34 274.1 16.0 253 189-498 12-266 (306)
300 2z80_A TOLL-like receptor 2, v 100.0 2.5E-30 8.7E-35 281.6 13.0 286 161-506 33-327 (353)
301 2z66_A Variable lymphocyte rec 100.0 2.6E-29 8.9E-34 267.9 18.3 141 358-498 148-292 (306)
302 2z80_A TOLL-like receptor 2, v 100.0 2.4E-29 8.1E-34 273.9 16.2 204 40-279 32-237 (353)
303 3zyj_A Leucine-rich repeat-con 100.0 1.9E-28 6.5E-33 275.0 22.6 233 208-498 64-297 (440)
304 3ogk_B Coronatine-insensitive 100.0 6.7E-32 2.3E-36 316.4 -6.2 130 37-167 110-251 (592)
305 3zyi_A Leucine-rich repeat-con 100.0 2.4E-28 8.4E-33 275.2 22.7 232 209-498 76-308 (452)
306 4fcg_A Uncharacterized protein 100.0 1.2E-28 4E-33 264.5 17.7 228 14-247 80-316 (328)
307 4fcg_A Uncharacterized protein 100.0 2.4E-28 8.1E-33 262.1 19.7 234 208-493 81-314 (328)
308 3ogk_B Coronatine-insensitive 100.0 1.2E-31 4.2E-36 314.1 -6.8 427 31-492 65-550 (592)
309 3zyi_A Leucine-rich repeat-con 100.0 6.8E-28 2.3E-32 271.6 22.7 249 16-278 55-304 (452)
310 3zyj_A Leucine-rich repeat-con 100.0 7.5E-28 2.6E-32 270.2 22.0 248 16-277 44-292 (440)
311 1ozn_A Reticulon 4 receptor; N 100.0 5E-28 1.7E-32 255.0 18.6 226 17-246 13-239 (285)
312 1wwl_A Monocyte differentiatio 100.0 1.4E-29 4.8E-34 270.2 4.5 250 11-278 39-310 (312)
313 3g06_A SSPH2 (leucine-rich rep 100.0 5.8E-27 2E-31 270.0 25.6 107 361-480 202-308 (622)
314 3o53_A Protein LRIM1, AGAP0063 100.0 7.7E-29 2.6E-33 265.1 9.2 260 15-345 10-270 (317)
315 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-28 9.1E-33 257.1 13.1 249 235-520 14-265 (285)
316 3g06_A SSPH2 (leucine-rich rep 99.9 1E-26 3.5E-31 267.9 24.6 268 15-336 40-307 (622)
317 3o53_A Protein LRIM1, AGAP0063 99.9 3.8E-29 1.3E-33 267.5 3.6 268 160-498 11-281 (317)
318 1wwl_A Monocyte differentiatio 99.9 2.2E-28 7.5E-33 261.0 6.5 233 6-246 56-310 (312)
319 4azs_A Methyltransferase WBDD; 99.9 2.2E-28 7.6E-33 280.3 5.0 185 592-786 241-437 (569)
320 3oja_A Leucine-rich immune mol 99.9 9E-28 3.1E-32 271.7 7.8 236 183-488 33-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 6.5E-27 2.2E-31 264.7 12.1 193 40-245 35-227 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 4.1E-26 1.4E-30 239.1 17.1 151 356-507 96-251 (276)
323 2p1m_B Transport inhibitor res 99.9 1.8E-29 6.3E-34 295.8 -12.7 244 19-274 47-324 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 3.2E-25 1.1E-29 232.3 19.3 222 20-246 12-238 (276)
325 2o6q_A Variable lymphocyte rec 99.9 3E-25 1E-29 231.4 16.2 215 265-506 17-231 (270)
326 2p1m_B Transport inhibitor res 99.9 3.4E-29 1.2E-33 293.6 -15.7 437 11-497 62-548 (594)
327 1p9a_G Platelet glycoprotein I 99.9 6.9E-25 2.3E-29 230.5 15.4 215 260-506 6-220 (290)
328 2o6q_A Variable lymphocyte rec 99.9 1.1E-23 3.7E-28 219.6 21.7 203 16-246 17-219 (270)
329 3rfs_A Internalin B, repeat mo 99.9 3.2E-24 1.1E-28 223.8 17.5 222 208-498 19-240 (272)
330 1p9a_G Platelet glycoprotein I 99.9 7.6E-24 2.6E-28 222.5 19.0 203 11-221 6-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 6E-24 2E-28 221.7 15.8 218 15-246 19-236 (272)
332 3en9_A Glycoprotease, O-sialog 99.9 8.3E-25 2.8E-29 249.3 8.0 186 588-788 339-539 (540)
333 2xwt_C Thyrotropin receptor; s 99.9 1E-23 3.5E-28 215.6 15.0 195 19-221 15-218 (239)
334 3goz_A Leucine-rich repeat-con 99.9 8.9E-26 3E-30 246.2 -0.9 81 20-100 3-93 (362)
335 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 4.2E-29 237.1 5.4 263 189-495 3-299 (362)
336 2ca6_A RAN GTPase-activating p 99.9 5.4E-25 1.9E-29 242.6 1.3 267 199-497 23-320 (386)
337 4glp_A Monocyte differentiatio 99.9 9.2E-24 3.1E-28 225.0 10.2 226 39-278 64-308 (310)
338 3m19_A Variable lymphocyte rec 99.9 2.8E-23 9.6E-28 213.9 12.9 190 291-506 16-205 (251)
339 2ca6_A RAN GTPase-activating p 99.9 2.9E-25 1E-29 244.7 -2.4 134 356-489 183-339 (386)
340 2xwt_C Thyrotropin receptor; s 99.9 8.5E-23 2.9E-27 208.7 16.0 203 6-218 25-236 (239)
341 4ay9_X Follicle-stimulating ho 99.9 1.3E-22 4.4E-27 220.0 17.2 249 8-274 3-256 (350)
342 1h6u_A Internalin H; cell adhe 99.9 3.4E-23 1.1E-27 220.0 11.3 212 17-247 21-232 (308)
343 4glp_A Monocyte differentiatio 99.9 3.4E-23 1.2E-27 220.6 11.3 225 16-246 65-308 (310)
344 2ast_B S-phase kinase-associat 99.9 2.6E-24 9E-29 232.5 1.1 256 17-311 49-315 (336)
345 1h6u_A Internalin H; cell adhe 99.9 2.1E-22 7.3E-27 213.7 15.0 196 11-223 37-232 (308)
346 4ay9_X Follicle-stimulating ho 99.9 5E-22 1.7E-26 215.3 18.0 204 42-249 12-219 (350)
347 2ast_B S-phase kinase-associat 99.9 7.6E-24 2.6E-28 228.9 2.9 252 40-335 48-315 (336)
348 3m19_A Variable lymphocyte rec 99.9 1.5E-21 5E-26 201.0 18.7 180 15-222 14-193 (251)
349 2o6s_A Variable lymphocyte rec 99.9 4.1E-21 1.4E-25 191.6 16.5 181 18-209 10-190 (208)
350 1zar_A RIO2 kinase; serine kin 99.9 3.9E-22 1.3E-26 208.0 7.8 148 582-760 87-252 (282)
351 2v70_A SLIT-2, SLIT homolog 2 99.8 1.3E-21 4.5E-26 196.5 10.5 159 361-520 33-193 (220)
352 2v9t_B SLIT homolog 2 protein 99.8 1.9E-21 6.7E-26 195.2 10.6 139 360-498 32-170 (220)
353 3cvr_A Invasion plasmid antige 99.8 1.4E-20 4.7E-25 214.1 16.0 134 16-172 60-193 (571)
354 3e6j_A Variable lymphocyte rec 99.8 2.3E-20 7.7E-25 188.8 12.6 146 360-506 40-185 (229)
355 1h6t_A Internalin B; cell adhe 99.8 1.2E-20 4.3E-25 198.2 9.4 190 15-221 24-213 (291)
356 2o6s_A Variable lymphocyte rec 99.8 6.9E-20 2.4E-24 182.7 14.3 181 42-233 10-190 (208)
357 2xot_A Amphoterin-induced prot 99.8 1.6E-20 5.5E-25 204.2 9.7 181 292-498 21-207 (361)
358 1h6t_A Internalin B; cell adhe 99.8 8.2E-20 2.8E-24 192.0 14.2 128 357-494 87-214 (291)
359 3cvr_A Invasion plasmid antige 99.8 1.8E-19 6.2E-24 204.9 18.1 183 64-283 60-249 (571)
360 1m9s_A Internalin B; cell inva 99.8 4.2E-20 1.4E-24 212.8 10.8 200 14-230 20-219 (605)
361 2v9t_B SLIT homolog 2 protein 99.8 3.1E-19 1.1E-23 179.1 14.9 152 18-172 14-165 (220)
362 1w8a_A SLIT protein; signaling 99.8 1.2E-19 4.2E-24 177.9 10.9 155 362-520 10-166 (192)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 3.9E-19 1.3E-23 178.4 13.9 155 17-174 13-168 (220)
364 2xot_A Amphoterin-induced prot 99.8 3.6E-19 1.2E-23 193.6 14.4 175 43-245 22-202 (361)
365 1dce_A Protein (RAB geranylger 99.8 4.9E-21 1.7E-25 219.2 -0.6 165 302-487 398-567 (567)
366 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.3E-24 207.4 11.9 200 208-479 21-220 (605)
367 3e6j_A Variable lymphocyte rec 99.8 1.6E-18 5.3E-23 175.3 15.8 153 17-173 21-173 (229)
368 1dce_A Protein (RAB geranylger 99.8 8.5E-21 2.9E-25 217.3 -2.7 175 304-499 363-552 (567)
369 4ezg_A Putative uncharacterize 99.8 8E-19 2.7E-23 173.1 10.8 154 36-197 41-194 (197)
370 1xeu_A Internalin C; cellular 99.8 3.6E-19 1.2E-23 183.9 8.1 169 13-197 17-185 (263)
371 4ezg_A Putative uncharacterize 99.8 2E-18 6.9E-23 170.2 12.3 155 309-494 40-195 (197)
372 2wfh_A SLIT homolog 2 protein 99.8 2E-18 7E-23 169.1 10.9 154 362-520 12-166 (193)
373 1xeu_A Internalin C; cellular 99.8 3.9E-18 1.3E-22 176.2 13.3 153 308-496 36-188 (263)
374 1w8a_A SLIT protein; signaling 99.7 1.5E-17 5.3E-22 162.9 15.0 137 361-498 30-167 (192)
375 3sb4_A Hypothetical leucine ri 99.7 2.4E-18 8.3E-23 184.6 10.0 102 359-462 225-327 (329)
376 4b8c_D Glucose-repressible alc 99.7 2.7E-19 9.1E-24 211.6 2.2 192 15-218 173-369 (727)
377 1zth_A RIO1 serine protein kin 99.7 3.3E-18 1.1E-22 176.2 6.1 137 587-735 49-219 (258)
378 3sb4_A Hypothetical leucine ri 99.7 2.2E-18 7.6E-23 184.9 4.9 291 3-340 11-324 (329)
379 4b8c_D Glucose-repressible alc 99.7 3E-18 1E-22 202.6 5.1 159 24-194 210-369 (727)
380 2o6r_A Variable lymphocyte rec 99.7 5.9E-17 2E-21 156.7 13.0 142 361-505 8-149 (177)
381 2ell_A Acidic leucine-rich nuc 99.7 4.7E-17 1.6E-21 156.0 11.1 134 360-495 24-162 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 5.7E-17 1.9E-21 151.9 10.2 129 359-489 16-149 (149)
383 4fdw_A Leucine rich hypothetic 99.7 3.9E-16 1.3E-20 170.7 13.9 251 199-493 127-383 (401)
384 2wfh_A SLIT homolog 2 protein 99.7 7.2E-16 2.4E-20 150.9 13.6 127 18-148 13-139 (193)
385 4fs7_A Uncharacterized protein 99.6 2E-15 6.8E-20 166.2 18.2 335 75-485 59-393 (394)
386 2ell_A Acidic leucine-rich nuc 99.6 5.2E-16 1.8E-20 148.6 11.3 136 87-248 24-163 (168)
387 4fdw_A Leucine rich hypothetic 99.6 1E-14 3.6E-19 159.4 21.5 251 15-287 113-368 (401)
388 2je0_A Acidic leucine-rich nuc 99.6 1.7E-16 5.9E-21 148.6 5.8 126 15-142 17-147 (149)
389 3g39_A Variable lymphocyte rec 99.6 8E-16 2.7E-20 147.2 9.9 118 386-506 11-128 (170)
390 2o6r_A Variable lymphocyte rec 99.6 3.3E-15 1.1E-19 144.4 13.8 131 17-150 9-139 (177)
391 1a9n_A U2A', U2A'; complex (nu 99.6 9E-16 3.1E-20 148.1 9.0 134 355-494 14-154 (176)
392 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 5.6E-21 168.8 3.2 139 586-736 96-266 (397)
393 2r9u_A Variable lymphocyte rec 99.6 2.5E-15 8.4E-20 144.3 9.8 116 387-505 15-130 (174)
394 4fs7_A Uncharacterized protein 99.6 4.7E-14 1.6E-18 155.2 21.4 336 26-461 58-393 (394)
395 1ds9_A Outer arm dynein; leuci 99.6 2.9E-17 1E-21 162.0 -6.1 162 309-494 14-186 (198)
396 1a9n_A U2A', U2A'; complex (nu 99.6 3.3E-15 1.1E-19 144.1 7.6 133 35-172 15-153 (176)
397 1ds9_A Outer arm dynein; leuci 99.6 3E-17 1E-21 162.0 -7.6 136 12-152 15-157 (198)
398 3g39_A Variable lymphocyte rec 99.5 7.1E-14 2.4E-18 133.6 14.4 109 361-472 10-118 (170)
399 2r9u_A Variable lymphocyte rec 99.5 5.5E-14 1.9E-18 134.8 11.9 113 362-478 14-126 (174)
400 4gt6_A Cell surface protein; l 99.4 2.2E-12 7.5E-17 141.8 18.4 336 75-492 51-390 (394)
401 2ifg_A High affinity nerve gro 99.4 5.4E-13 1.8E-17 144.2 10.2 132 364-498 12-146 (347)
402 2ifg_A High affinity nerve gro 99.4 9.8E-13 3.3E-17 142.1 10.9 130 387-520 11-145 (347)
403 4gt6_A Cell surface protein; l 99.4 4.8E-12 1.6E-16 139.1 16.6 311 104-493 56-370 (394)
404 3un9_A NLR family member X1; l 99.3 2.1E-13 7.2E-18 147.6 -0.8 164 312-494 71-253 (372)
405 3un9_A NLR family member X1; l 99.3 3E-14 1E-18 154.3 -8.1 112 110-221 71-196 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 1.6E-11 5.5E-16 126.8 9.7 147 580-733 9-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 1.2E-09 4.1E-14 119.3 18.6 123 354-480 234-356 (379)
408 4h09_A Hypothetical leucine ri 99.1 9.7E-10 3.3E-14 120.1 17.6 133 354-490 211-343 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 1.4E-10 4.9E-15 119.6 6.4 139 583-733 18-213 (264)
410 2ra8_A Uncharacterized protein 99.0 8.5E-11 2.9E-15 125.9 1.8 185 35-243 135-341 (362)
411 2ra8_A Uncharacterized protein 98.9 2.5E-10 8.5E-15 122.2 2.6 138 105-246 166-321 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 4.3E-09 1.5E-13 113.9 9.7 143 588-734 41-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 1.6E-09 5.5E-14 114.3 5.4 188 589-787 24-287 (304)
414 3rw6_A Nuclear RNA export fact 98.6 6E-09 2E-13 105.5 0.7 79 406-486 168-257 (267)
415 1io0_A Tropomodulin; LRR prote 98.6 1.3E-08 4.3E-13 98.3 1.6 91 355-445 31-136 (185)
416 1io0_A Tropomodulin; LRR prote 98.6 6.9E-09 2.3E-13 100.2 -0.3 118 376-493 28-164 (185)
417 3r70_A Aminoglycoside phosphot 98.5 3.9E-07 1.4E-11 96.5 12.7 136 586-734 38-237 (320)
418 3rw6_A Nuclear RNA export fact 98.5 1.5E-08 5E-13 102.6 0.8 115 346-462 126-257 (267)
419 3tdw_A Gentamicin resistance p 98.4 2.3E-06 8E-11 89.7 13.3 136 590-734 24-224 (306)
420 4gkh_A Aminoglycoside 3'-phosp 98.4 3E-06 1E-10 87.4 13.8 135 591-733 30-222 (272)
421 3d1u_A Putative fructosamine-3 98.3 1.9E-06 6.6E-11 89.2 11.6 77 588-668 18-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.2E-06 1.4E-10 89.9 11.2 77 587-669 43-122 (362)
423 3ats_A Putative uncharacterize 98.1 2E-06 6.8E-11 92.7 6.4 80 590-669 25-121 (357)
424 3e4g_A ATP synthase subunit S, 98.0 6E-07 2.1E-11 83.9 -0.7 85 38-122 60-150 (176)
425 3e4g_A ATP synthase subunit S, 97.9 3.3E-06 1.1E-10 78.9 2.6 82 88-169 62-149 (176)
426 2q83_A YTAA protein; 2635576, 97.9 6.3E-05 2.2E-09 80.4 12.4 139 590-733 37-251 (346)
427 2olc_A MTR kinase, methylthior 97.9 3E-05 1E-09 84.8 9.8 75 590-666 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.7 0.00027 9.3E-09 73.5 12.8 138 588-730 39-232 (312)
429 3f7w_A Putative fructosamine-3 97.6 0.00021 7.2E-09 74.1 10.3 79 586-668 16-97 (288)
430 3rfe_A Platelet glycoprotein I 97.6 0.00011 3.7E-09 65.5 6.5 68 436-506 12-80 (130)
431 2pyw_A Uncharacterized protein 97.5 0.00023 8E-09 78.2 10.3 78 703-784 231-313 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.5 3.4E-05 1.1E-09 73.5 2.2 63 359-421 40-111 (197)
433 1pgv_A TMD-1, tropomodulin TMD 97.5 2.8E-05 9.7E-10 74.1 1.6 114 380-493 37-170 (197)
434 3dxq_A Choline/ethanolamine ki 97.3 0.00039 1.3E-08 72.5 7.6 131 587-734 20-202 (301)
435 3csv_A Aminoglycoside phosphot 97.2 0.0016 5.4E-08 69.0 11.5 140 590-734 23-217 (333)
436 2ppq_A HSK, HK, homoserine kin 97.1 0.0016 5.5E-08 68.5 10.7 154 577-733 9-216 (322)
437 3feg_A Choline/ethanolamine ki 97.0 0.00069 2.4E-08 72.5 6.9 139 590-733 55-253 (379)
438 1zyl_A Hypothetical protein YI 97.0 0.0031 1.1E-07 66.5 11.7 140 591-734 32-223 (328)
439 1nw1_A Choline kinase (49.2 KD 97.0 0.00071 2.4E-08 74.2 6.1 72 590-667 78-158 (429)
440 3rfe_A Platelet glycoprotein I 96.9 0.0016 5.3E-08 57.9 6.4 37 433-469 32-68 (130)
441 2yle_A Protein spire homolog 1 96.8 0.016 5.6E-07 55.2 12.8 105 667-789 34-138 (229)
442 2qg7_A Ethanolamine kinase PV0 96.8 0.0017 5.7E-08 71.5 7.0 74 590-668 113-188 (458)
443 3c5i_A Choline kinase; choline 96.7 0.0013 4.4E-08 70.8 5.1 73 590-667 38-120 (369)
444 3i1a_A Spectinomycin phosphotr 96.6 0.0079 2.7E-07 63.6 10.9 32 703-734 205-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 96.1 0.0086 2.9E-07 64.2 7.2 140 590-733 57-279 (401)
446 3mes_A Choline kinase; malaria 95.7 0.0067 2.3E-07 65.8 4.6 74 590-668 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.7 0.077 2.6E-06 57.4 4.6 29 705-733 245-279 (401)
448 4ann_A ESSB; membrane protein, 78.5 3.8 0.00013 39.0 6.6 121 639-793 43-163 (215)
449 4ano_A ESSB; membrane protein, 67.8 13 0.00045 35.4 7.5 116 639-789 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 64.0 0.85 2.9E-05 50.0 -1.8 60 588-650 145-213 (463)
451 2lz0_A Uncharacterized protein 59.3 18 0.0006 29.7 5.9 45 420-465 8-52 (100)
452 2lz0_A Uncharacterized protein 54.7 25 0.00085 28.8 6.1 45 372-417 8-52 (100)
453 2ks1_B Epidermal growth factor 53.7 17 0.00057 24.6 3.8 11 558-568 29-39 (44)
454 2l2t_A Receptor tyrosine-prote 49.5 14 0.00049 24.9 2.9 10 560-569 30-39 (44)
455 2x6h_A GH13170P, VPS34, phosph 44.9 3.6E+02 0.012 30.6 15.3 45 682-733 529-575 (696)
456 3ls8_A Phosphatidylinositol 3- 34.4 5.2E+02 0.018 28.7 15.1 46 681-733 454-501 (614)
457 1cja_A Protein (actin-fragmin 26.0 1.1E+02 0.0036 31.3 6.3 139 587-734 71-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.7e-67 Score=628.49 Aligned_cols=515 Identities=32% Similarity=0.492 Sum_probs=380.2
Q ss_pred CCccCCCCC-CCCCCCCeecCCCCccccCCCcc---ccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccC
Q 002892 3 LGGTVPPHI-GNLSFLMYLDISENNFRGYLPNE---LGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGP 78 (870)
Q Consensus 3 ~~~~~p~~~-~~l~~L~~L~ls~n~l~~~~p~~---~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 78 (870)
+.|.+|..+ .++++|++|||++|++++..|.. +..+++|++|++++|.+++..|. +.+++|++|+|++|.+++.
T Consensus 138 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~ 215 (768)
T 3rgz_A 138 LDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTG 215 (768)
T ss_dssp EECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSC
T ss_pred cCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCC
Confidence 346667665 77777777777777777665554 45555555555555555543332 4445555555555555443
Q ss_pred CCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeec----------------------CccceecCCcccCC-C
Q 002892 79 IPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFAD----------------------NNLRGEIPNEIGNL-K 135 (870)
Q Consensus 79 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~----------------------N~l~~~~~~~l~~l-~ 135 (870)
+|. ++++++|++|+|++|++++.+|..++.+++|++|++++ |++++.+|..+..+ +
T Consensus 216 ~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~ 294 (768)
T 3rgz_A 216 IPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACD 294 (768)
T ss_dssp CCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCT
T ss_pred Ccc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcC
Confidence 333 45555555555555555444444444444444444444 44444445444443 5
Q ss_pred CCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCC-CccEEE
Q 002892 136 NLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNAS-KLIGLD 214 (870)
Q Consensus 136 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~ 214 (870)
+|++|++++|++++.+|..+.++++|++|++++|++++.+|......+++|++|++++|++++.+|..+.+++ +|++|+
T Consensus 295 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~ 374 (768)
T 3rgz_A 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374 (768)
T ss_dssp TCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEE
T ss_pred cCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEE
Confidence 5555555555555555555555555555555555555555544333455555555555555555555555554 555555
Q ss_pred ccCCcccCCCcccccc--ccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchh
Q 002892 215 LNSNSLSGQIPNTFGN--LRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQ 292 (870)
Q Consensus 215 Ls~N~i~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~ 292 (870)
+++|++++..|..+.. +++|++|++++|.++.. .+..+..+++|++|++++|++.+..|..++.+. .|+
T Consensus 375 Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~--------~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~ 445 (768)
T 3rgz_A 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK--------IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLR 445 (768)
T ss_dssp CCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEE--------CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCC
T ss_pred ccCCCcCCCcChhhhhcccCCccEEECCCCccccc--------cCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCC
Confidence 5555555555555544 55566666666655532 345688889999999999999988888887774 789
Q ss_pred hhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhc-CCCCCCCcccccCccccceeecCCcc
Q 002892 293 QFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQR-NNLNGPIPTCLSSLISLRQLHLGSNQ 371 (870)
Q Consensus 293 ~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~-n~~~~~~p~~~~~l~~L~~L~Ls~N~ 371 (870)
.|++++|.+++.+|..+..+++|++|++++|++.+.+|..+..+++|+.|+++ |.+.+.+|.+++.+++|++|+|++|+
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 525 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNS 525 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCc
Confidence 99999999999999999999999999999999998999999999999999888 67777899999999999999999999
Q ss_pred cCCCCCcccccccccceEecCCCccCCCCcccc-----------------------------------------------
Q 002892 372 LTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDI----------------------------------------------- 404 (870)
Q Consensus 372 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------------------------------------------- 404 (870)
+++.+|..+..+++|+.|++++|.+++.+|..+
T Consensus 526 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (768)
T 3rgz_A 526 FSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLN 605 (768)
T ss_dssp CEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGG
T ss_pred ccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhh
Confidence 999999999999999999999999887776543
Q ss_pred -----------------------cCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeE
Q 002892 405 -----------------------QNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYL 461 (870)
Q Consensus 405 -----------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 461 (870)
+.+++|+.|||++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|
T Consensus 606 ~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp GGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEE
Confidence 346789999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccccccccccccccCCCCcCCCCCCCCCC
Q 002892 462 DLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLAQSFLWNYALCGPPRLQVPPCKEDDT 532 (870)
Q Consensus 462 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~~~~ 532 (870)
||++|+++|.+|..+..+++|+.||||+|+++|.+|..++|.++...+|.+|+.+||+| .++|..+.+
T Consensus 686 dLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~~ 753 (768)
T 3rgz_A 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNA 753 (768)
T ss_dssp ECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC-
T ss_pred ECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999998 447876544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-61 Score=582.63 Aligned_cols=489 Identities=30% Similarity=0.457 Sum_probs=337.9
Q ss_pred CCCCCCCCCCCCeecCCCCccccCCCc--cccCCCCCcEEEccCCcccccCCccc-cCCCCCCEEEcCCCccccCCCCC-
Q 002892 7 VPPHIGNLSFLMYLDISENNFRGYLPN--ELGQLRRLKFLGFAYNDLTGSFPSWI-GVFSKLQVLSLRNNSFTGPIPNS- 82 (870)
Q Consensus 7 ~p~~~~~l~~L~~L~ls~n~l~~~~p~--~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~- 82 (870)
+|+.++.+++|++|||++|.+++.+|. .++.+++|++|++++|.+++.+|..+ ..+++|++|+|++|++++..|..
T Consensus 92 l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 171 (768)
T 3rgz_A 92 SVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGW 171 (768)
T ss_dssp CCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHH
T ss_pred CchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhh
Confidence 347778888888888888887776776 77777777777777777776666554 56666666666666666544433
Q ss_pred --CC----------------------CCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCC
Q 002892 83 --LF----------------------NLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLA 138 (870)
Q Consensus 83 --~~----------------------~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~ 138 (870)
+. .+++|++|+|++|++++.+|. ++.+++|++|++++|++++.+|..+.++++|+
T Consensus 172 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~ 250 (768)
T 3rgz_A 172 VLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELK 250 (768)
T ss_dssp HHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCC
T ss_pred hhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCC
Confidence 44 445555555555555544444 55555555555555555555555555555555
Q ss_pred eeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCC
Q 002892 139 DLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSN 218 (870)
Q Consensus 139 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 218 (870)
+|++++|++++.+|.. .+++|++|++++|++++..|..++..+++|++|+|++|++++.+|..|.++++|++|++++|
T Consensus 251 ~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 328 (768)
T 3rgz_A 251 LLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSN 328 (768)
T ss_dssp EEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCC
Confidence 5555555555444443 55555666666666655666666555567777777777777666777777777777777777
Q ss_pred cccCCCccc-cccccccccccccccccccc-cCCCCCc----------------cccccccc--ccccceEEcCCCCCCC
Q 002892 219 SLSGQIPNT-FGNLRHLSTLNIRANYLTTE-TSSNGEW----------------SFLSSLTN--CNKLRALSLGSNPLDS 278 (870)
Q Consensus 219 ~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~-~~~~~~~----------------~~~~~l~~--l~~L~~L~L~~N~l~~ 278 (870)
++++.+|.. |.++++|++|++++|.++.. +...... ..+..+.. +++|++|++++|++.+
T Consensus 329 ~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 408 (768)
T 3rgz_A 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408 (768)
T ss_dssp EEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEE
T ss_pred cccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccc
Confidence 776555544 66777777777777766532 1110000 00111111 4456666666666655
Q ss_pred CCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhc-CCCCCCCccccc
Q 002892 279 ILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQR-NNLNGPIPTCLS 357 (870)
Q Consensus 279 ~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~-n~~~~~~p~~~~ 357 (870)
..|..+..+. .|+.|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+++ |.+.+.+|..+.
T Consensus 409 ~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 487 (768)
T 3rgz_A 409 KIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487 (768)
T ss_dssp ECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred ccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHh
Confidence 5565555543 57777777777777777777777777777777777777777777777777777777 666667777888
Q ss_pred CccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccc---------
Q 002892 358 SLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITI--------- 428 (870)
Q Consensus 358 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~--------- 428 (870)
.+++|++|+|++|++++.+|.+|..+++|+.|+|++|++++.+|..++++++|+.|+|++|+++|.+|..+
T Consensus 488 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~ 567 (768)
T 3rgz_A 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA 567 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCC
T ss_pred cCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhh
Confidence 88888888888888888888888888888888888888887888888888888888888888776666433
Q ss_pred -------------------------------------------------------------cCCCCCCEEEcCCCcccCc
Q 002892 429 -------------------------------------------------------------GGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 429 -------------------------------------------------------------~~l~~L~~L~Ls~N~l~~~ 447 (870)
+.+++|+.|||++|+++|.
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ 647 (768)
T 3rgz_A 568 NFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 647 (768)
T ss_dssp STTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSC
T ss_pred hccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccccc
Confidence 3356788888899998888
Q ss_pred ccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCC
Q 002892 448 IPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTN 499 (870)
Q Consensus 448 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 499 (870)
+|..|+++++|+.|+|++|+++|.+|..|+.+++|+.||||+|+++|.+|..
T Consensus 648 ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~ 699 (768)
T 3rgz_A 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG
T ss_pred CCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH
Confidence 9999999999999999999999999999999999999999999999999863
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-56 Score=527.89 Aligned_cols=487 Identities=21% Similarity=0.198 Sum_probs=432.5
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
++|..+.. ++++|||++|++++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|++
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 56766654 7899999999999888889999999999999999999888999999999999999999999888999999
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccce--E
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTII--I 163 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~--~ 163 (870)
+++|++|+|++|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|+ .
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 99999999999999976678899999999999999999975545566699999999999999988899999999999 8
Q ss_pred EEeecccccccCCCcccCC------------------------------------------------C--Cccceeeecc
Q 002892 164 INLVGNQLSGHRPSTMGHS------------------------------------------------L--PNRQFLLLWA 193 (870)
Q Consensus 164 L~l~~N~l~~~~~~~~~~~------------------------------------------------l--~~L~~L~L~~ 193 (870)
|++++|++++..|..+... + .+|+.|++++
T Consensus 184 L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~ 263 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQK 263 (606)
T ss_dssp EECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTT
T ss_pred EecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeec
Confidence 9999999998777655321 0 1688899999
Q ss_pred cccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCC
Q 002892 194 NRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGS 273 (870)
Q Consensus 194 n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~ 273 (870)
|++++..+..|..+++|++|++++|+++ .+|..+.++++|++|++++|.++.+. +..+..+++|++|++++
T Consensus 264 n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~--------~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLC--------QISASNFPSLTHLSIKG 334 (606)
T ss_dssp CCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGG--------GGCGGGCTTCSEEECCS
T ss_pred CccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCc--------hhhhhccCcCCEEECCC
Confidence 9999888888999999999999999999 68888999999999999999998754 34688899999999999
Q ss_pred CCCCCCCCcc-ccccccchhhhhcccccccccC--chhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhc-CCCC
Q 002892 274 NPLDSILPPL-IGNFSASFQQFYAHECKLKGSI--PKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQR-NNLN 349 (870)
Q Consensus 274 N~l~~~~~~~-~~~~~~~l~~l~l~~n~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~-n~~~ 349 (870)
|.+.+..|.. +..+ ..|+.|++++|.+++.. +..+..+++|+.|++++|++.+..|..|..+++|+.|+++ |.+.
T Consensus 335 n~~~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 335 NTKRLELGTGCLENL-ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp CSSCCBCCSSTTTTC-TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCcccccchhhhhcc-CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9998655554 5544 58999999999999776 7889999999999999999999999999999999999998 5666
Q ss_pred CCCcc-cccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCC---CcccccCCccCCEEEccCCccCCccc
Q 002892 350 GPIPT-CLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGS---LPSDIQNLKVLIYLNLSRNQLSGNIP 425 (870)
Q Consensus 350 ~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p 425 (870)
+..+. .+..+++|++|++++|.+++..|..|..+++|++|++++|.+++. .+..+..+++|++|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 66554 489999999999999999999999999999999999999999862 34679999999999999999999999
Q ss_pred ccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCccccc
Q 002892 426 ITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNF 505 (870)
Q Consensus 426 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 505 (870)
..|+++++|+.|+|++|++++..|..|.++++| .|+|++|++++..|..+..+++|+.|++++|+|+|.++.. .|..|
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~-~~~~w 571 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI-YFLEW 571 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH-HHHHH
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH-HHHHH
Confidence 999999999999999999999999999999999 9999999999988999999999999999999999999852 33444
Q ss_pred c
Q 002892 506 L 506 (870)
Q Consensus 506 ~ 506 (870)
.
T Consensus 572 ~ 572 (606)
T 3t6q_A 572 Y 572 (606)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.1e-56 Score=529.03 Aligned_cols=511 Identities=21% Similarity=0.240 Sum_probs=346.6
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
+||+.+. +++++|+|++|++++..+..|.++++|++|++++|.+++..|..++.+++|++|+|++|++++..+..|++
T Consensus 18 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~ 95 (680)
T 1ziw_A 18 QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAF 95 (680)
T ss_dssp SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhcc
Confidence 4666654 67888888888887666667888888888888888888777777888888888888888887544446788
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccccccccc--ccccceE
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIF--NISTIII 163 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~ 163 (870)
+++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|++++..+..+. .+++|++
T Consensus 96 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 175 (680)
T 1ziw_A 96 CTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKK 175 (680)
T ss_dssp CTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESE
T ss_pred CCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccE
Confidence 88888888888888766667788888888888888888877777777888888888888887766666544 4467777
Q ss_pred EEeecccccccCCCcccC--------------------------CCCccceeeecccccccccCCcccCCCC--ccEEEc
Q 002892 164 INLVGNQLSGHRPSTMGH--------------------------SLPNRQFLLLWANRLTGTIPNSITNASK--LIGLDL 215 (870)
Q Consensus 164 L~l~~N~l~~~~~~~~~~--------------------------~l~~L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~L 215 (870)
|++++|++++..|..+.. ..++|+.|++++|++++..|..|..++. |++|++
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 888777777666554321 1134455555555555555555555433 555555
Q ss_pred cCCcccCCCccccccccccccccccccccccccCCC-CCc--------------------ccc----cccccccccceEE
Q 002892 216 NSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSN-GEW--------------------SFL----SSLTNCNKLRALS 270 (870)
Q Consensus 216 s~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~--------------------~~~----~~l~~l~~L~~L~ 270 (870)
++|++++..|.+|..+++|++|++++|.++.+.+.. +.. .++ ..+..+++|++|+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 555555555555555555555555555554432210 000 011 1456677788888
Q ss_pred cCCCCCCCCCCccccccc---------------------------cchhhhhcccccccccCchhhhCccCCcEEEeeCC
Q 002892 271 LGSNPLDSILPPLIGNFS---------------------------ASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTN 323 (870)
Q Consensus 271 L~~N~l~~~~~~~~~~~~---------------------------~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N 323 (870)
+++|++.++.+..|..+. ..++.+++++|++++..|.++..+++|+.|++++|
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 415 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN 415 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCC
Confidence 888888777666554432 24566666777777777888888888888888888
Q ss_pred CccccCC-chhhchhhHHHHHhc-CCCCCCCcccccCccccceeecCCcccC--CCCCcccccccccceEecCCCccCCC
Q 002892 324 DLNGTIP-TTLGRLQQLQALLQR-NNLNGPIPTCLSSLISLRQLHLGSNQLT--SSIPSSFWSLEYILRIDLSSNSLSGS 399 (870)
Q Consensus 324 ~l~~~~~-~~~~~l~~L~~L~l~-n~~~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~ 399 (870)
.+.+.+| ..|..+++|+.|+++ |.+.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|+|++|++++.
T Consensus 416 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i 495 (680)
T 1ziw_A 416 EIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495 (680)
T ss_dssp CCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcC
Confidence 8876555 677888888888777 5555555666677777777777777765 45667777777777777777777766
Q ss_pred CcccccCCccCCEEEccCCccCCccc--------ccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCC
Q 002892 400 LPSDIQNLKVLIYLNLSRNQLSGNIP--------ITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGE 471 (870)
Q Consensus 400 ~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 471 (870)
.|..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++.+.+..|.++++|+.|+|++|+|++.
T Consensus 496 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 575 (680)
T 1ziw_A 496 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTL 575 (680)
T ss_dssp CTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcC
Confidence 66667777777777777777765422 2366777777777777777755555677777777777777777765
Q ss_pred CCcchhhccccceeeccCCcccccCCCCC--cccccccccccccccccC
Q 002892 472 IPKSFEILSHLKRLNVSHNRLEGKIPTNG--PFRNFLAQSFLWNYALCG 518 (870)
Q Consensus 472 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~ 518 (870)
.+..|..+++|+.|+|++|++++..|..- .+.......+.+|++.|+
T Consensus 576 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 576 PASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 56666777777777777777776555311 233444445667777765
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-55 Score=523.22 Aligned_cols=503 Identities=21% Similarity=0.218 Sum_probs=386.9
Q ss_pred CCccCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCC
Q 002892 3 LGGTVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNS 82 (870)
Q Consensus 3 ~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 82 (870)
+++-.|..++++++|++|+|++|++++..|..|.++++|++|++++|.+++..+..|+.+++|++|+|++|++++..|..
T Consensus 37 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 116 (680)
T 1ziw_A 37 LRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNP 116 (680)
T ss_dssp CCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCT
T ss_pred CCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhH
Confidence 34444456899999999999999999888888999999999999999999555557999999999999999998766678
Q ss_pred CCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCccc--CCCCCCeeeccccccccccccccccc--
Q 002892 83 LFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIG--NLKNLADLVLALNNLIGPIPTTIFNI-- 158 (870)
Q Consensus 83 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l-- 158 (870)
|+++++|++|+|++|.+++..|..++.+++|++|++++|.+++..+..+. .+++|++|++++|++++..|..+..+
T Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 196 (680)
T 1ziw_A 117 FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196 (680)
T ss_dssp TTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSE
T ss_pred ccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhh
Confidence 99999999999999999888888888999999999999998866655543 45778888888887776666555443
Q ss_pred -------------------------ccceEEEeecccccccCCCcccCCC--CccceeeecccccccccCCcccCCCCcc
Q 002892 159 -------------------------STIIIINLVGNQLSGHRPSTMGHSL--PNRQFLLLWANRLTGTIPNSITNASKLI 211 (870)
Q Consensus 159 -------------------------~~L~~L~l~~N~l~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 211 (870)
++|+.|++++|.+++..|..+.. + ++|+.|++++|++++..|..|..+++|+
T Consensus 197 L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~-l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (680)
T 1ziw_A 197 LFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG-LKWTNLTMLDLSYNNLNVVGNDSFAWLPQLE 275 (680)
T ss_dssp ECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGG-GGGSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhc-cCcCCCCEEECCCCCcCccCcccccCccccc
Confidence 23344444555554444444332 2 2255555555555554455555555555
Q ss_pred EEEccCCcccCCCccc---------------------------------cccccccccccccccccccccCCC-CCccc-
Q 002892 212 GLDLNSNSLSGQIPNT---------------------------------FGNLRHLSTLNIRANYLTTETSSN-GEWSF- 256 (870)
Q Consensus 212 ~L~Ls~N~i~~~~~~~---------------------------------~~~l~~L~~L~L~~N~l~~~~~~~-~~~~~- 256 (870)
+|++++|++.+..|.. |..+++|++|++++|.++.+.... ....-
T Consensus 276 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 355 (680)
T 1ziw_A 276 YFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINL 355 (680)
T ss_dssp EEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTC
T ss_pred EeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCC
Confidence 5555555554444433 333444444455555554433210 00000
Q ss_pred ----------------cccccc--ccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCc-hhhhCccCCcE
Q 002892 257 ----------------LSSLTN--CNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIP-KEIGNLRGLIA 317 (870)
Q Consensus 257 ----------------~~~l~~--l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~-~~l~~l~~L~~ 317 (870)
...+.. .++|+.|++++|++.++.|..+..+ ..|+.|++++|.+.+.+| ..+.++++|++
T Consensus 356 ~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 434 (680)
T 1ziw_A 356 KYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWL-GHLEVLDLGLNEIGQELTGQEWRGLENIFE 434 (680)
T ss_dssp CEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTC-TTCCEEECCSSCCEEECCSGGGTTCTTCCE
T ss_pred cEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCC-CCCCEEeCCCCcCccccCcccccCcccccE
Confidence 001111 1467777778888888878777765 489999999999998766 78999999999
Q ss_pred EEeeCCCccccCCchhhchhhHHHHHhcCC-CC--CCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCC
Q 002892 318 LSLFTNDLNGTIPTTLGRLQQLQALLQRNN-LN--GPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSN 394 (870)
Q Consensus 318 L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~-~~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 394 (870)
|++++|++.+..+..|..+++|+.|+++++ +. +.+|..+..+++|++|+|++|+++++.+..|.++++|++|+|++|
T Consensus 435 L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N 514 (680)
T 1ziw_A 435 IYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHN 514 (680)
T ss_dssp EECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCC
Confidence 999999999999999999999999999844 43 678999999999999999999999988999999999999999999
Q ss_pred ccCCCCc--------ccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCC
Q 002892 395 SLSGSLP--------SDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNN 466 (870)
Q Consensus 395 ~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 466 (870)
++++..+ ..|.++++|+.|+|++|+++.+.+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|
T Consensus 515 ~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 515 NLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 9986422 23789999999999999999766678999999999999999999888888999999999999999
Q ss_pred cccCCCCcchh-hccccceeeccCCcccccCCCCCccccccc
Q 002892 467 NLSGEIPKSFE-ILSHLKRLNVSHNRLEGKIPTNGPFRNFLA 507 (870)
Q Consensus 467 ~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~ 507 (870)
+|++..|..|. .+++|+.|++++|+|.|.|+...+|..|..
T Consensus 595 ~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~ 636 (680)
T 1ziw_A 595 LITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWIN 636 (680)
T ss_dssp CCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSS
T ss_pred cCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHH
Confidence 99988888888 899999999999999999986456766654
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-54 Score=509.35 Aligned_cols=488 Identities=20% Similarity=0.196 Sum_probs=432.9
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
-+.++.++.+++ .+|..+.. ++++|++++|.+++..|..|+.+++|++|+|++|+|++..|..|+++++|++|+|++
T Consensus 14 ~~~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 90 (606)
T 3t6q_A 14 NKTYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTA 90 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCC
Confidence 457899999998 68877754 799999999999988899999999999999999999988899999999999999999
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCC
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRP 176 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 176 (870)
|++++..|..|+.+++|++|++++|++++..+..++++++|++|++++|++++.....+..+++|++|++++|++++..+
T Consensus 91 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 91 NPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred CcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 99998889999999999999999999997778889999999999999999997665666669999999999999997777
Q ss_pred CcccCCCCccc--eeeecccccccccCCcccCC-----------------------------------------------
Q 002892 177 STMGHSLPNRQ--FLLLWANRLTGTIPNSITNA----------------------------------------------- 207 (870)
Q Consensus 177 ~~~~~~l~~L~--~L~L~~n~l~~~~~~~~~~l----------------------------------------------- 207 (870)
..+. .+++|+ .|++++|++++..|..+...
T Consensus 171 ~~~~-~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~ 249 (606)
T 3t6q_A 171 EDMS-SLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFE 249 (606)
T ss_dssp HHHH-TTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGG
T ss_pred hhhh-hhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhc
Confidence 6654 478888 89999999998777665432
Q ss_pred ----CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcc
Q 002892 208 ----SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPL 283 (870)
Q Consensus 208 ----~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 283 (870)
.+|++|++++|.+++..+..|..+++|++|++++|.++.++ ..+..+++|++|++++|++.++.|..
T Consensus 250 ~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp---------~~l~~l~~L~~L~l~~n~l~~~~~~~ 320 (606)
T 3t6q_A 250 GLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELP---------SGLVGLSTLKKLVLSANKFENLCQIS 320 (606)
T ss_dssp GGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCC---------SSCCSCTTCCEEECTTCCCSBGGGGC
T ss_pred hhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCC---------hhhcccccCCEEECccCCcCcCchhh
Confidence 16889999999999888888999999999999999998654 45788999999999999999988878
Q ss_pred ccccccchhhhhcccccccccCch-hhhCccCCcEEEeeCCCccccC--CchhhchhhHHHHHhc-CCCCCCCcccccCc
Q 002892 284 IGNFSASFQQFYAHECKLKGSIPK-EIGNLRGLIALSLFTNDLNGTI--PTTLGRLQQLQALLQR-NNLNGPIPTCLSSL 359 (870)
Q Consensus 284 ~~~~~~~l~~l~l~~n~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~-n~~~~~~p~~~~~l 359 (870)
+..++ .|+.|++++|.+.+.+|. .+..+++|++|++++|.+.+.. +..+..+++|+.|+++ |.+.+..|..+..+
T Consensus 321 ~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 399 (606)
T 3t6q_A 321 ASNFP-SLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKEC 399 (606)
T ss_dssp GGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTC
T ss_pred hhccC-cCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCC
Confidence 87774 899999999999977765 4899999999999999999776 7889999999999998 66777778899999
Q ss_pred cccceeecCCcccCCCCCc-ccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCc---ccccccCCCCCC
Q 002892 360 ISLRQLHLGSNQLTSSIPS-SFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGN---IPITIGGLKDLI 435 (870)
Q Consensus 360 ~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~ 435 (870)
++|++|++++|++++..+. .|..+++|+.|++++|.+++..|..|.++++|++|+|++|++++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 9999999999999877665 489999999999999999988899999999999999999999873 336789999999
Q ss_pred EEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCC-Ccccccccccccccc
Q 002892 436 TLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTN-GPFRNFLAQSFLWNY 514 (870)
Q Consensus 436 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~ 514 (870)
.|++++|.+++..|..|..+++|+.|+|++|++++..|..|..++.| .|++++|++++.+|.. ..+.......+.+|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 558 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNP 558 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999 9999999999877753 234444555678888
Q ss_pred cccCC
Q 002892 515 ALCGP 519 (870)
Q Consensus 515 ~~c~~ 519 (870)
+.|.-
T Consensus 559 ~~c~c 563 (606)
T 3t6q_A 559 LDCTC 563 (606)
T ss_dssp EECSG
T ss_pred ccccC
Confidence 87753
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-54 Score=511.17 Aligned_cols=470 Identities=19% Similarity=0.152 Sum_probs=370.1
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
++|+.+. ++|++|+|++|++++..+..|.++++|++|++++|.+++..|..|+.+++|++|+|++|.+++..|..|++
T Consensus 25 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~ 102 (606)
T 3vq2_A 25 KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSG 102 (606)
T ss_dssp SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTT
T ss_pred cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCC
Confidence 4676665 78999999999999877778999999999999999999878888999999999999999999777889999
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccce-ecCCcccCCCCCCeeecccccccccccccccccccce--
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRG-EIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTII-- 162 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~-- 162 (870)
+++|++|+|++|++++..+..|+++++|++|++++|++++ .+|..++++++|++|++++|++++..+..+..+.+|+
T Consensus 103 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~ 182 (606)
T 3vq2_A 103 LTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQV 182 (606)
T ss_dssp CTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTC
T ss_pred cccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccc
Confidence 9999999999999986666889999999999999999985 4688999999999999999999988888888877765
Q ss_pred --EEEeecccccccCCCcccCCCCccceeeecccccc-------------------------------------------
Q 002892 163 --IINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLT------------------------------------------- 197 (870)
Q Consensus 163 --~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~------------------------------------------- 197 (870)
+|++++|++++..+..+. ..+|+.|++++|.++
T Consensus 183 l~~L~l~~n~l~~~~~~~~~--~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~ 260 (606)
T 3vq2_A 183 NLSLDMSLNPIDFIQDQAFQ--GIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCD 260 (606)
T ss_dssp CCEEECTTCCCCEECTTTTT--TCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGG
T ss_pred cceeeccCCCcceeCccccc--CceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhh
Confidence 799999999876665553 238888888888764
Q ss_pred ---------------cccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccccccccc
Q 002892 198 ---------------GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTN 262 (870)
Q Consensus 198 ---------------~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 262 (870)
+..|. +..+++|++|++++|.+.. +| .+..+++|++|++++|.+..++ .+ .
T Consensus 261 l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~~lp----------~~-~ 326 (606)
T 3vq2_A 261 VTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLKQFP----------TL-D 326 (606)
T ss_dssp SEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCSSCC----------CC-C
T ss_pred ccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCcccc----------cC-C
Confidence 22233 5566777777777777763 44 6777777777777777775432 23 6
Q ss_pred ccccceEEcCCCCCCCCCCccccccccchhhhhccccccccc--CchhhhCccCCcEEEeeCCCccccCCchhhchhhHH
Q 002892 263 CNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGS--IPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQ 340 (870)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~--~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 340 (870)
+++|++|++++|+..+.. .+.. ...|+.|++++|.+++. .|..+..+++|+.|++++|.+.+ +|..|..+++|+
T Consensus 327 l~~L~~L~l~~n~~~~~~--~~~~-l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~ 402 (606)
T 3vq2_A 327 LPFLKSLTLTMNKGSISF--KKVA-LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQ 402 (606)
T ss_dssp CSSCCEEEEESCSSCEEC--CCCC-CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCC
T ss_pred CCccceeeccCCcCccch--hhcc-CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCC
Confidence 777777777777443322 2222 24677888888887765 47778888888888888888774 557777888888
Q ss_pred HHHhc-CCCCCCCc-ccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCC-CCcccccCCccCCEEEccC
Q 002892 341 ALLQR-NNLNGPIP-TCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSG-SLPSDIQNLKVLIYLNLSR 417 (870)
Q Consensus 341 ~L~l~-n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~ 417 (870)
.|+++ |.+.+..| ..+..+++|++|++++|++++..|..|..+++|++|++++|.+++ .+|..|+++++|++|+|++
T Consensus 403 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 482 (606)
T 3vq2_A 403 HLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482 (606)
T ss_dssp EEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred eeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCC
Confidence 88777 55555555 567788888888888888887778888888888888888888876 3677788888888888888
Q ss_pred CccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcc-ccceeeccCCcccccC
Q 002892 418 NQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILS-HLKRLNVSHNRLEGKI 496 (870)
Q Consensus 418 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~ 496 (870)
|++++..|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|+|+ .+|..+..++ +|+.|++++|+|.|.+
T Consensus 483 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 8888777778888888888888888888777888888888888888888887 6676677776 4888888888888877
Q ss_pred CC
Q 002892 497 PT 498 (870)
Q Consensus 497 p~ 498 (870)
+.
T Consensus 562 ~~ 563 (606)
T 3vq2_A 562 EH 563 (606)
T ss_dssp TT
T ss_pred cc
Confidence 75
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.2e-54 Score=508.67 Aligned_cols=450 Identities=21% Similarity=0.174 Sum_probs=398.6
Q ss_pred CCccCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCC
Q 002892 3 LGGTVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNS 82 (870)
Q Consensus 3 ~~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 82 (870)
+.+-.|..+.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..+..
T Consensus 44 l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 123 (606)
T 3vq2_A 44 LKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFP 123 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSC
T ss_pred cCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccc
Confidence 45556678999999999999999999888899999999999999999999888999999999999999999999777788
Q ss_pred CCCCCCCcEEeccCCcccc-ccCcCCCCcCCccEEEeecCccceecCCcccCCCCCC----eeecccccccccccccccc
Q 002892 83 LFNLSSLVRLDSRFNSISG-NIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLA----DLVLALNNLIGPIPTTIFN 157 (870)
Q Consensus 83 ~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~ 157 (870)
++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++|+ +|++++|++++..+..+..
T Consensus 124 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~ 203 (606)
T 3vq2_A 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccC
Confidence 9999999999999999985 5799999999999999999999988888898887776 7999999998666555554
Q ss_pred cccceEEEeecccccc----------------------------------------------------------cCCCcc
Q 002892 158 ISTIIIINLVGNQLSG----------------------------------------------------------HRPSTM 179 (870)
Q Consensus 158 l~~L~~L~l~~N~l~~----------------------------------------------------------~~~~~~ 179 (870)
. +|+.|++++|.+++ ..|.
T Consensus 204 ~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-- 280 (606)
T 3vq2_A 204 I-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-- 280 (606)
T ss_dssp C-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS--
T ss_pred c-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc--
Confidence 4 89999999997641 1222
Q ss_pred cCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccc
Q 002892 180 GHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSS 259 (870)
Q Consensus 180 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 259 (870)
...+++|+.|++++|.++. +| .+..+++|++|++++|++. .+| .+ .+++|+.|++++|..... ..
T Consensus 281 ~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~----------~~ 345 (606)
T 3vq2_A 281 FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSIS----------FK 345 (606)
T ss_dssp CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEE----------CC
T ss_pred cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccc----------hh
Confidence 3457899999999999984 56 8999999999999999995 677 45 999999999999954431 14
Q ss_pred cccccccceEEcCCCCCCCCC--CccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCC-chhhch
Q 002892 260 LTNCNKLRALSLGSNPLDSIL--PPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIP-TTLGRL 336 (870)
Q Consensus 260 l~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l 336 (870)
+..+++|++|++++|++.+.. |..+..+ ..|+.|++++|.+++ +|..+..+++|+.|++++|++.+..| ..|..+
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~-~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 423 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGT-NSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSL 423 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCC-SCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTC
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccC-CcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcc
Confidence 678999999999999998773 6666655 479999999999986 66889999999999999999998887 789999
Q ss_pred hhHHHHHhc-CCCCCCCcccccCccccceeecCCcccCC-CCCcccccccccceEecCCCccCCCCcccccCCccCCEEE
Q 002892 337 QQLQALLQR-NNLNGPIPTCLSSLISLRQLHLGSNQLTS-SIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLN 414 (870)
Q Consensus 337 ~~L~~L~l~-n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 414 (870)
++|+.|+++ |.+.+..|..+..+++|++|+|++|++++ .+|..|..+++|+.|+|++|++++..|..|.++++|++|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 999999998 77788889999999999999999999997 5899999999999999999999998899999999999999
Q ss_pred ccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCC-CCCeEecCCCcccCCCC
Q 002892 415 LSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLT-SLEYLDLSNNNLSGEIP 473 (870)
Q Consensus 415 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p 473 (870)
|++|++++..|..|+++++|+.|+|++|+++ .+|..+..++ +|+.|++++|.+.+..+
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999999999999999999999999998 5777799997 69999999999986544
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-53 Score=518.08 Aligned_cols=473 Identities=21% Similarity=0.221 Sum_probs=334.6
Q ss_pred CCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccC-CccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcE
Q 002892 13 NLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSF-PSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVR 91 (870)
Q Consensus 13 ~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 91 (870)
..++|++|||++|.+++..|..|..+++|++|+|++|...+.+ |..|+.+++|++|+|++|.|++..|..|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 3467788888888887777777888888888888888554444 677788888888888888887777778888888888
Q ss_pred EeccCCccccccCcC--CCCcCCccEEEeecCccceecC-CcccCCCCCCeeeccccccccccccccccc--ccceEEEe
Q 002892 92 LDSRFNSISGNIPSK--IGNLTKLVHLNFADNNLRGEIP-NEIGNLKNLADLVLALNNLIGPIPTTIFNI--STIIIINL 166 (870)
Q Consensus 92 L~L~~n~i~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l 166 (870)
|+|++|.+++.+|.. |+.+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|++
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 888888887655554 7778888888888888876544 467788888888888888877777777766 67777777
Q ss_pred ecccccccCCCcccCC-----CCccceeeecccccccccCCcccC-----------------------------------
Q 002892 167 VGNQLSGHRPSTMGHS-----LPNRQFLLLWANRLTGTIPNSITN----------------------------------- 206 (870)
Q Consensus 167 ~~N~l~~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~~~~----------------------------------- 206 (870)
++|.+.+..+..+... ...|+.|++++|++++..+..+..
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~ 261 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFA 261 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTT
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhh
Confidence 7777776665544321 113677777777665444433322
Q ss_pred ---CCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcc
Q 002892 207 ---ASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPL 283 (870)
Q Consensus 207 ---l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 283 (870)
.++|++|++++|.+.+..+..|..+++|+.|+|++|.++.+.. ..+..+++|++|++++|++.++.|..
T Consensus 262 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~ 333 (844)
T 3j0a_A 262 GLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD--------EAFYGLDNLQVLNLSYNLLGELYSSN 333 (844)
T ss_dssp TTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT--------TTTTTCSSCCEEEEESCCCSCCCSCS
T ss_pred ccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh--------HHhcCCCCCCEEECCCCCCCccCHHH
Confidence 1467777777777776666677777777777777777765432 24666677777777777777666666
Q ss_pred ccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcc---------
Q 002892 284 IGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPT--------- 354 (870)
Q Consensus 284 ~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~--------- 354 (870)
+..++ .|+.|++++|.+.+..+..+..+++|+.|++++|.+++. + .+++|+.|.+++|....+|.
T Consensus 334 ~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 334 FYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred hcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcccccccccccceee
Confidence 66554 567777777777666666677777777777777776632 1 13444444444332223322
Q ss_pred -------------cccCccccceeecCCcccCCCCCc-ccccccccceEecCCCccC-----CCCcccccCCccCCEEEc
Q 002892 355 -------------CLSSLISLRQLHLGSNQLTSSIPS-SFWSLEYILRIDLSSNSLS-----GSLPSDIQNLKVLIYLNL 415 (870)
Q Consensus 355 -------------~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L 415 (870)
.+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 244678888888888888765443 4566788888888888886 344566888888888888
Q ss_pred cCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccccc
Q 002892 416 SRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 416 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 495 (870)
++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++..|..| .+|+.|++++|++.|.
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICE 562 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCS
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccc
Confidence 88888888888888888888888888888877776666 788888888888888888765 4788888888888888
Q ss_pred CCCCCccccc
Q 002892 496 IPTNGPFRNF 505 (870)
Q Consensus 496 ~p~~~~~~~~ 505 (870)
|+.. .|..|
T Consensus 563 c~~~-~f~~~ 571 (844)
T 3j0a_A 563 CELS-TFINW 571 (844)
T ss_dssp SSCC-SHHHH
T ss_pred cccH-HHHHH
Confidence 8742 34444
No 10
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=478.37 Aligned_cols=481 Identities=20% Similarity=0.195 Sum_probs=411.9
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
+||+.+. +++++|||++|++++..+..|.++++|++|++++|++++..|..|+.+++|++|+|++|++++..|..|.+
T Consensus 21 ~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 4676554 57999999999999888889999999999999999999888889999999999999999999877889999
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccce-ecCCcccCCCCCCeeecccccccccccccccccccc---
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRG-EIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTI--- 161 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 161 (870)
+++|++|++++|++++..+..|+.+++|++|++++|.+++ .+|..++++++|++|++++|++++..+..+..+.+|
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~ 178 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTC
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchh
Confidence 9999999999999996555579999999999999999996 368999999999999999999998888999999998
Q ss_pred -eEEEeecccccccCCCcccCCCCccceeeecccccc-------------------------------cccCCcccCCC-
Q 002892 162 -IIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLT-------------------------------GTIPNSITNAS- 208 (870)
Q Consensus 162 -~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------------~~~~~~~~~l~- 208 (870)
+.|++++|.+++..+..+.. .+|+.|++++|... ......+..+.
T Consensus 179 ~~~L~l~~n~l~~~~~~~~~~--~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~ 256 (570)
T 2z63_A 179 NLSLDLSLNPMNFIQPGAFKE--IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 256 (570)
T ss_dssp CCEEECTTCCCCEECTTTTTT--CEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGG
T ss_pred hhhcccCCCCceecCHHHhcc--CcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccc
Confidence 89999999999888877653 38999999987422 11112222222
Q ss_pred -CccEEEccCC-cccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccc
Q 002892 209 -KLIGLDLNSN-SLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGN 286 (870)
Q Consensus 209 -~L~~L~Ls~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 286 (870)
.++.+++++| .+.+..+..|..+++|+.|++++|.++.++ ..+..+ +|++|++++|.+..+...
T Consensus 257 l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~---------~~~~~~-~L~~L~l~~n~~~~l~~~---- 322 (570)
T 2z63_A 257 LTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK---------DFSYNF-GWQHLELVNCKFGQFPTL---- 322 (570)
T ss_dssp SEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCC---------BCCSCC-CCSEEEEESCBCSSCCBC----
T ss_pred cchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhh---------hhhccC-CccEEeeccCcccccCcc----
Confidence 3567777777 677788888999999999999999888644 345666 899999999998855432
Q ss_pred cccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccC--CchhhchhhHHHHHhcCCCCCCCcccccCccccce
Q 002892 287 FSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTI--PTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQ 364 (870)
Q Consensus 287 ~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~ 364 (870)
....++.+++.+|.+.+..+. ..+++|+.|++++|++.+.. +..+..+++|+.|++++|....++..+..+++|++
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~ 400 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEH 400 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCE
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCE
Confidence 234788889999988876665 78899999999999998654 77888999999999996655556666999999999
Q ss_pred eecCCcccCCCCC-cccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccC-CcccccccCCCCCCEEEcCCC
Q 002892 365 LHLGSNQLTSSIP-SSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLS-GNIPITIGGLKDLITLSLARN 442 (870)
Q Consensus 365 L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N 442 (870)
|++++|++++..+ ..|..+++|+.|++++|.+.+..|..|.++++|++|+|++|+++ +.+|..|..+++|+.|++++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 9999999997766 57899999999999999999999999999999999999999998 578999999999999999999
Q ss_pred cccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccc
Q 002892 443 RFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 443 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
++++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|+++|.+|....+..|.
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl 544 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 544 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHH
T ss_pred ccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHH
Confidence 9999889999999999999999999998888889999999999999999999999754443553
No 11
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-52 Score=439.27 Aligned_cols=260 Identities=28% Similarity=0.446 Sum_probs=216.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec------CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||++++++.+.+..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 356888899999999999999863 47789999998776677788999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceE
Q 002892 658 LVLEFMPNGSLEKWLYSHN------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTAR 725 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 725 (870)
+||||+++|+|.++++..+ ..++|.++..|+.||++||+||| +++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999997532 46999999999999999999999 56699999999999999999999
Q ss_pred EeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHh
Q 002892 726 VSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLS 804 (870)
Q Consensus 726 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 804 (870)
|+|||+|+...............||++|||||++.++.++.++|||||||++|||+| |+.||.+.... .+...+...
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~ 246 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQG 246 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHT
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 999999987654443334444568999999999999999999999999999999999 89999764221 111111110
Q ss_pred cCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 805 LPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
. . ...+..|+.++.+++.+||+.||++|||++||.+.|+++.+.
T Consensus 247 ~---------------~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 R---------------V--LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp C---------------C--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---------------C--CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 0 0 001124566899999999999999999999999999998764
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-52 Score=434.54 Aligned_cols=265 Identities=25% Similarity=0.428 Sum_probs=209.0
Q ss_pred HhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeech--hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQ--LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
...+++++.+.||+|+||+||+|+++ ..||||+++.. .....+.|.+|++++++++|||||++++++.+ +..++|
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 34578888999999999999999865 36999998643 24556789999999999999999999998764 568999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
||||++|+|.++++..+..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+......
T Consensus 110 mEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 186 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186 (307)
T ss_dssp EECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred EEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence 9999999999999877777999999999999999999999 5669999999999999999999999999998765444
Q ss_pred CcccccccccccccCCcccccC---CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 740 DSVTQTMTMATIGYMAPEYASD---GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+.... ..+...+...... +.
T Consensus 187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~~~~~~~~-------p~ 258 (307)
T 3omv_A 187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVGRGYAS-------PD 258 (307)
T ss_dssp -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHTTCCC-------CC
T ss_pred cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHHHhcCCCC-------CC
Confidence 4444455689999999999864 46899999999999999999999999763222 1122211111100 00
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
....+.+|+..+.+++.+||+.+|++|||++||++.|+.++..+
T Consensus 259 ------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 259 ------LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ------STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ------cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 00011235667999999999999999999999999999887643
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-51 Score=496.59 Aligned_cols=478 Identities=21% Similarity=0.209 Sum_probs=391.0
Q ss_pred CeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCC-CCCCCCCCCCcEEeccC
Q 002892 18 MYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPI-PNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 18 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~ 96 (870)
+..|.++++++ .+|. -.++|++|+|++|.+++..|..|..+++|++|+|++|.+.+.+ |..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 46889999999 5776 4679999999999999888999999999999999999655455 78899999999999999
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCc--ccCCCCCCeeeccccccccccc-ccccccccceEEEeecccccc
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNE--IGNLKNLADLVLALNNLIGPIP-TTIFNISTIIIINLVGNQLSG 173 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~ 173 (870)
|++++..|..|+++++|++|+|++|.+++..|.. +.++++|++|+|++|.+++..+ ..+.++++|++|+|++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999888999999999999999999999766655 9999999999999999987655 679999999999999999998
Q ss_pred cCCCcccCCC--CccceeeecccccccccCCcccCCCC------ccEEEccCCcccCCCccccccc--------------
Q 002892 174 HRPSTMGHSL--PNRQFLLLWANRLTGTIPNSITNASK------LIGLDLNSNSLSGQIPNTFGNL-------------- 231 (870)
Q Consensus 174 ~~~~~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~------L~~L~Ls~N~i~~~~~~~~~~l-------------- 231 (870)
..+..+.. + ++|+.|++++|.+++..|..+..+.+ |++|++++|.+++..+..+...
T Consensus 163 ~~~~~l~~-l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 163 VCEHELEP-LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCSGGGHH-HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eCHHHccc-ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 88777653 3 78999999999999988888777766 9999999998877666555432
Q ss_pred ------------------------cccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 232 ------------------------RHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 232 ------------------------~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
++|+.|+|++|.+..+. +..+..+++|+.|+|++|++.++.|..|..+
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~--------~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 313 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLN--------SRVFETLKDLKVLNLAYNKINKIADEAFYGL 313 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEEC--------SCCSSSCCCCCEEEEESCCCCEECTTTTTTC
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccC--------hhhhhcCCCCCEEECCCCcCCCCChHHhcCC
Confidence 56788888888877654 2357778888888888888888777777666
Q ss_pred ccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeec
Q 002892 288 SASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHL 367 (870)
Q Consensus 288 ~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~L 367 (870)
. .|+.|++++|.+++..|..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|....++. +++|+.|++
T Consensus 314 ~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l 388 (844)
T 3j0a_A 314 D-NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFL 388 (844)
T ss_dssp S-SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEE
T ss_pred C-CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhcc
Confidence 4 78888888888887778888888888888888888887777778888888888888554443332 455666666
Q ss_pred CCcccCCCCCc----------------------ccccccccceEecCCCccCCCCcc-cccCCccCCEEEccCCccC---
Q 002892 368 GSNQLTSSIPS----------------------SFWSLEYILRIDLSSNSLSGSLPS-DIQNLKVLIYLNLSRNQLS--- 421 (870)
Q Consensus 368 s~N~l~~~~~~----------------------~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~--- 421 (870)
++|+++.. |. .+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 389 ~~N~l~~l-~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~ 467 (844)
T 3j0a_A 389 SGNKLVTL-PKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAW 467 (844)
T ss_dssp ESCCCCCC-CCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSC
T ss_pred CCCCcccc-cccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccc
Confidence 66655522 22 134678888888888888864433 4566788999999999887
Q ss_pred --CcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCC
Q 002892 422 --GNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTN 499 (870)
Q Consensus 422 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 499 (870)
+..+..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|++++.+|..
T Consensus 468 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~ 545 (844)
T 3j0a_A 468 ETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV 545 (844)
T ss_dssp CSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC
T ss_pred ccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH
Confidence 44456788999999999999999999999999999999999999999977777766 89999999999999988863
Q ss_pred CcccccccccccccccccC
Q 002892 500 GPFRNFLAQSFLWNYALCG 518 (870)
Q Consensus 500 ~~~~~~~~~~~~~n~~~c~ 518 (870)
+.......+.+|++.|+
T Consensus 546 --~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 546 --FVSLSVLDITHNKFICE 562 (844)
T ss_dssp --CSSCCEEEEEEECCCCS
T ss_pred --hCCcCEEEecCCCcccc
Confidence 55555667788998884
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.6e-52 Score=439.91 Aligned_cols=259 Identities=27% Similarity=0.419 Sum_probs=208.2
Q ss_pred cCCCCCCeeccccceeEEEEEec------CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46777889999999999999864 478899999987777777889999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCce
Q 002892 659 VLEFMPNGSLEKWLYSHN--------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTA 724 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 724 (870)
||||+++|+|.++++..+ ..++|.+++.|+.||++||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999998532 35899999999999999999999 5669999999999999999999
Q ss_pred EEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHH
Q 002892 725 RVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKL 803 (870)
Q Consensus 725 kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 803 (870)
||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... .+...+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987754444444455679999999999999999999999999999999999 89999763221 11111111
Q ss_pred hcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 804 SLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
.. +...+..|+.++.+++.+||+.||++|||++||++.|+.+.+.
T Consensus 276 g~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 GR-----------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp TC-----------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CC-----------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 00 0001123566799999999999999999999999999998764
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.5e-51 Score=472.75 Aligned_cols=486 Identities=19% Similarity=0.186 Sum_probs=406.0
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
+||+.+. ++|++|||++|++++..|..|..+++|++|++++|++++..|..|+.+++|++|+|++|++++..|..+++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 6787765 79999999999999888899999999999999999999888899999999999999999999766667999
Q ss_pred CCCCcEEeccCCcccc-ccCcCCCCcCCccEEEeecCc-cceecCCcccCCCCCCeeecccccccccccccccccccceE
Q 002892 86 LSSLVRLDSRFNSISG-NIPSKIGNLTKLVHLNFADNN-LRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIII 163 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 163 (870)
+++|++|+|++|++++ ..|..++.+++|++|++++|. +....+..+.++++|++|++++|++++..|..+..+++|++
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 9999999999999986 356789999999999999999 55444578999999999999999999999999999999999
Q ss_pred EEeecccccccCCCcccCCCCccceeeeccccccccc---CCcccCCCCccEEEccCCcccCCCccc----ccccccccc
Q 002892 164 INLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTI---PNSITNASKLIGLDLNSNSLSGQIPNT----FGNLRHLST 236 (870)
Q Consensus 164 L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~Ls~N~i~~~~~~~----~~~l~~L~~ 236 (870)
|++++|.+. ..|..+...+++|++|++++|++++.. ......+++|+.|++++|.+++..+.. +..+++|+.
T Consensus 177 L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~ 255 (549)
T 2z81_A 177 LTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSE 255 (549)
T ss_dssp EEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCE
T ss_pred EecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccc
Confidence 999999986 344455456899999999999999742 223456789999999999998655443 466789999
Q ss_pred ccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCC----ccccccccchhhhhcccccccccCchhh-hC
Q 002892 237 LNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILP----PLIGNFSASFQQFYAHECKLKGSIPKEI-GN 311 (870)
Q Consensus 237 L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~~~~~l~~l~l~~n~l~~~~~~~l-~~ 311 (870)
|++++|.+..+..... .....+..+.+|+.|+++++.+..... +.+......++.+.+++|.+. .+|..+ ..
T Consensus 256 l~l~~~~~~~~~~~~~--~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~ 332 (549)
T 2z81_A 256 VEFDDCTLNGLGDFNP--SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQH 332 (549)
T ss_dssp EEEESCEEECCSCCCC--CTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHH
T ss_pred cccccccccccccccc--cchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhc
Confidence 9999999887542110 112346778899999999998765310 111223357889999999987 677766 57
Q ss_pred ccCCcEEEeeCCCccccCCc---hhhchhhHHHHHhcCCCCCCCc---ccccCccccceeecCCcccCCCCCcccccccc
Q 002892 312 LRGLIALSLFTNDLNGTIPT---TLGRLQQLQALLQRNNLNGPIP---TCLSSLISLRQLHLGSNQLTSSIPSSFWSLEY 385 (870)
Q Consensus 312 l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~l~n~~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 385 (870)
+++|+.|++++|++.+.+|. .++.+++|+.|++++|....++ ..+..+++|++|+|++|+++ .+|..+..+++
T Consensus 333 l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~ 411 (549)
T 2z81_A 333 LKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEK 411 (549)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTT
T ss_pred CccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccccc
Confidence 99999999999999987643 4788899999999955555544 45889999999999999999 67888999999
Q ss_pred cceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCC
Q 002892 386 ILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSN 465 (870)
Q Consensus 386 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 465 (870)
|++|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|+.|+|++|+++ .+|. ...+++|+.|+|++
T Consensus 412 L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~ 482 (549)
T 2z81_A 412 MRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISR 482 (549)
T ss_dssp CCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCS
T ss_pred ccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCC
Confidence 999999999998 4555442 68999999999999743 57899999999999998 5665 57899999999999
Q ss_pred CcccCCCCcchhhccccceeeccCCcccccCCCCCccccccc
Q 002892 466 NNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLA 507 (870)
Q Consensus 466 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~ 507 (870)
|+|++.+|..|..+++|+.|++++|+|+|.+|....+..|..
T Consensus 483 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~ 524 (549)
T 2z81_A 483 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 524 (549)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHH
T ss_pred CccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHH
Confidence 999998899999999999999999999999996555555543
No 16
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-51 Score=434.49 Aligned_cols=257 Identities=24% Similarity=0.381 Sum_probs=211.6
Q ss_pred cCCCCCCeeccccceeEEEEEec------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++++.+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 45667889999999999999863 46789999997543 334578999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC
Q 002892 658 LVLEFMPNGSLEKWLYSH---------------NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM 722 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 722 (870)
+|||||++|+|.+++... ...++|..+..|+.|||+||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 999999999999999743 235899999999999999999999 56699999999999999999
Q ss_pred ceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHH
Q 002892 723 TARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWI 801 (870)
Q Consensus 723 ~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~ 801 (870)
.+||+|||+|+.....+.....+...||++|||||++.++.++.++|||||||++|||+| |+.||.+... ..+...+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~~i 260 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEMI 260 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence 999999999987644443344455679999999999999999999999999999999998 8999976322 1111111
Q ss_pred HHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 002892 802 KLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIK 863 (870)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~ 863 (870)
... .....+.+|+..+.+++.+||+.||++|||++||++.|+++.
T Consensus 261 ~~~-----------------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNR-----------------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTT-----------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcC-----------------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 100 001112346678999999999999999999999999998764
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.6e-50 Score=423.35 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=208.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
.+.|++.+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++.+.+..|+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 356889999999999999999965 7999999999876555556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
|+||+|.+++...+ +++.++..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.+.... .
T Consensus 153 ~~gg~L~~~l~~~~--l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 225 (346)
T 4fih_A 153 LEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 225 (346)
T ss_dssp CTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--C
T ss_pred CCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--C
Confidence 99999999997643 899999999999999999999 6669999999999999999999999999998774332 2
Q ss_pred cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccC
Q 002892 743 TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQ 822 (870)
Q Consensus 743 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (870)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ......+....+....
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~~~~------------ 291 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPRLK------------ 291 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCCCCS------------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCCCCC------------
Confidence 23456799999999999999999999999999999999999999975211 1111111111111100
Q ss_pred cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 823 PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 823 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
....++..+.+++.+||+.||++|||+.|+++
T Consensus 292 ---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01123456889999999999999999999976
No 18
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-49 Score=420.84 Aligned_cols=249 Identities=22% Similarity=0.337 Sum_probs=201.9
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
++|++.+.||+|+||+||+|+.. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999964 79999999997653 3456789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+||+|.+++... +..+++.++..++.||+.||+||| ++||+||||||+|||++++|.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 99999999999854 445799999999999999999999 667999999999999999999999999999866321
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ...+..+.....+..
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i~~~~~~~~------------ 245 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVLKIISGSFPPV------------ 245 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCCCC------------
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcCCCCCC------------
Confidence 1223445799999999999999999999999999999999999999976311 111112111111110
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+..++..+.+++.+||+.||++|||+.|+++
T Consensus 246 ------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 246 ------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0123456889999999999999999999976
No 19
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-49 Score=419.52 Aligned_cols=256 Identities=20% Similarity=0.239 Sum_probs=207.7
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
.+.|+..++||+|+||+||+|++. +|+.||||+++.... ..+|+.++++++|||||++++++.+.+..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356778889999999999999965 699999999976532 24699999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC-ceEEeccccccccCCCCCc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM-TARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~ 741 (870)
++||+|.++++..+. +++.++..++.||+.||+||| +++|+||||||+|||++.+| .+||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999986554 999999999999999999999 77799999999999999987 6999999999877543222
Q ss_pred c---cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 742 V---TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 742 ~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
. .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.+....+. ...+.... ....
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~--~~~~-------- 276 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEP--PPIR-------- 276 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSC--CGGG--------
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCC--CCch--------
Confidence 1 22345799999999999999999999999999999999999999976433221 22211110 0000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.||++|||+.|+++.+.+..+.
T Consensus 277 ------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 ------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp ------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 00113455788999999999999999999999999887654
No 20
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-49 Score=420.14 Aligned_cols=270 Identities=22% Similarity=0.331 Sum_probs=206.0
Q ss_pred cCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC----eeEEEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD----FKALVL 660 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 660 (870)
++|.+.+.||+|+||+||+|++ +|+.||||+++...... ..++.|+..+.+++|||||++++++.+.+ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4577788999999999999997 58999999997654332 33456777778899999999999997654 579999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-----HSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
||+++|+|.++++..+ ++|..+.+++.|+++||+|||+. +.++|+||||||+|||+++++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998654 89999999999999999999954 2348999999999999999999999999999876
Q ss_pred CCCCCcc--cccccccccccCCcccccCC------CcCcccchHhHHHHHHHHHhCCCCCCccccccc----------hH
Q 002892 736 GEDDDSV--TQTMTMATIGYMAPEYASDG------IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM----------SL 797 (870)
Q Consensus 736 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg~~p~~~~~~~~~----------~~ 797 (870)
....... ......||+.|||||++.+. .++.++|||||||++|||+||+.||........ ..
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 4433221 22345799999999998764 467899999999999999999887654222111 11
Q ss_pred HHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 798 KHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+... +.+..............+++..+.+++.+||+.||++||||.||++.|+++.+.-
T Consensus 239 ~~~~~~--------~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKV--------VCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHH--------HTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHH--------HhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 111111 1111111112223333456778999999999999999999999999999998753
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-49 Score=414.07 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=208.3
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999964 79999999997653 334577899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||++||+|.+++.+.+. +++.++..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999999986554 899999999999999999999 66799999999999999999999999999998755444
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....+. +
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~~~~--~----------- 253 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIKLEYD--F----------- 253 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCC--C-----------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCC--C-----------
Confidence 4445567899999999999999999999999999999999999999975211 1111111111110 0
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVV 856 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl 856 (870)
. ...+.++.+++.+|++.||++|||+.|+.
T Consensus 254 -p-----~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 -P-----EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -C-----TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -C-----cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 0 01234688999999999999999999864
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.1e-50 Score=472.31 Aligned_cols=439 Identities=21% Similarity=0.267 Sum_probs=271.0
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCccc------c------cCCccccCCCCCCEEEcCCCccccCCCCC
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLT------G------SFPSWIGVFSKLQVLSLRNNSFTGPIPNS 82 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~------~------~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 82 (870)
.+++.|+|++|++.+.+|.+++.+++|++|+|++|.+. + .+|... +..|+ +++++|.+.+..|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 46778888888888888888888888888888888652 1 112111 12223 333333333222222
Q ss_pred CCC-------------------CCCCcEEecc--CCccccccCcCCCCcCCccEEEeecCcccee---------------
Q 002892 83 LFN-------------------LSSLVRLDSR--FNSISGNIPSKIGNLTKLVHLNFADNNLRGE--------------- 126 (870)
Q Consensus 83 ~~~-------------------l~~L~~L~L~--~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~--------------- 126 (870)
+.. ...++.+.+. +|++++ +|..|+++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 221 0011111111 345554 455555555555555555555542
Q ss_pred --cCCccc--CCCCCCeeecccccccccccccccccccceEEEeeccc-ccc-cCCCcccC-----CCCccceeeecccc
Q 002892 127 --IPNEIG--NLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQ-LSG-HRPSTMGH-----SLPNRQFLLLWANR 195 (870)
Q Consensus 127 --~~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~-----~l~~L~~L~L~~n~ 195 (870)
+|..++ ++++|++|+|++|++.+.+|..+.++++|++|++++|+ +++ .+|..++. .+++|++|++++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 455555 55555555555555555555555555555555555554 444 44443322 12455555555555
Q ss_pred cccccCC--cccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccc-cceEEcC
Q 002892 196 LTGTIPN--SITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNK-LRALSLG 272 (870)
Q Consensus 196 l~~~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~-L~~L~L~ 272 (870)
++ .+|. .+.++++|++|++++|++++.+| .|+.+++|++|++++|.++.++ ..+..+++ |++|+++
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp---------~~l~~l~~~L~~L~Ls 385 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIP---------ANFCGFTEQVENLSFA 385 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECC---------TTSEEECTTCCEEECC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccccc---------HhhhhhcccCcEEEcc
Confidence 55 4555 55555555555555555554455 5555555555555555555322 23455555 5555555
Q ss_pred CCCCCCCCCccccccc-cchhhhhcccccccccCchhhh-------CccCCcEEEeeCCCccccCCchhhchhhHHHHHh
Q 002892 273 SNPLDSILPPLIGNFS-ASFQQFYAHECKLKGSIPKEIG-------NLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQ 344 (870)
Q Consensus 273 ~N~l~~~~~~~~~~~~-~~l~~l~l~~n~l~~~~~~~l~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 344 (870)
+|++.. .|..+.... ..++.|++++|.+++.+|..+. .+++|+.|++++|++.. +|.
T Consensus 386 ~N~l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~-lp~------------- 450 (636)
T 4eco_A 386 HNKLKY-IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISK-FPK------------- 450 (636)
T ss_dssp SSCCSS-CCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCS-CCT-------------
T ss_pred CCcCcc-cchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCc-CCH-------------
Confidence 555552 233322221 1333444444444444444444 56677777777777763 332
Q ss_pred cCCCCCCCcccccCccccceeecCCcccCCCCCccccccc-------ccceEecCCCccCCCCccccc--CCccCCEEEc
Q 002892 345 RNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLE-------YILRIDLSSNSLSGSLPSDIQ--NLKVLIYLNL 415 (870)
Q Consensus 345 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L 415 (870)
..+..+++|++|+|++|+++.+.+..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|
T Consensus 451 ---------~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~L 520 (636)
T 4eco_A 451 ---------ELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDL 520 (636)
T ss_dssp ---------HHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEEC
T ss_pred ---------HHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEEC
Confidence 2244567899999999999955445555443 8999999999999 6788886 8999999999
Q ss_pred cCCccCCcccccccCCCCCCEEEc------CCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccC
Q 002892 416 SRNQLSGNIPITIGGLKDLITLSL------ARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSH 489 (870)
Q Consensus 416 s~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 489 (870)
++|+|++ +|..+.++++|+.|+| ++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|+|++
T Consensus 521 s~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~ 596 (636)
T 4eco_A 521 SYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKD 596 (636)
T ss_dssp CSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCS
T ss_pred CCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcC
Confidence 9999997 8889999999999999 56888889999999999999999999999 48888766 8999999999
Q ss_pred CcccccCC
Q 002892 490 NRLEGKIP 497 (870)
Q Consensus 490 N~l~~~~p 497 (870)
|++.+.-+
T Consensus 597 N~l~~~~~ 604 (636)
T 4eco_A 597 NPNISIDL 604 (636)
T ss_dssp CTTCEEEC
T ss_pred CCCccccH
Confidence 99876443
No 23
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.6e-49 Score=423.60 Aligned_cols=267 Identities=25% Similarity=0.403 Sum_probs=217.9
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEecC------CcEEEEEEeechh-hHHHHHHHHHHHHHHhcCC-CceeEEeee
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLFD------GTNVAIKVFNLQL-ERAFRSFESECEVLRNVRH-RNLIKIFSS 649 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~~~ 649 (870)
.+.+...++|++.+.||+|+||+||+|++.. ++.||||+++... ....+.+.+|++++++++| ||||+++++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3345566889999999999999999998542 3579999997654 3445779999999999965 899999999
Q ss_pred eeeC-CeeEEEEecCCCCCHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCC
Q 002892 650 CCNL-DFKALVLEFMPNGSLEKWLYSH---------------NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKP 713 (870)
Q Consensus 650 ~~~~-~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~ 713 (870)
|.+. +..++|||||++|+|.++++.. +..+++..+..++.|||+||+||| +++||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 8764 5689999999999999999853 234899999999999999999999 66699999999
Q ss_pred CceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCcccc
Q 002892 714 NNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFT 792 (870)
Q Consensus 714 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~ 792 (870)
+|||+++++.+||+|||+|+...............||+.|||||++.++.|+.++|||||||++|||+| |+.||.+...
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987755554445556679999999999999999999999999999999998 8999976432
Q ss_pred ccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 793 GEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
.+ .+...+...... ..+..++.++.+++.+||+.||++|||++||++.|+++.+.
T Consensus 294 ~~-~~~~~i~~g~~~-----------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 294 DE-EFCRRLKEGTRM-----------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SH-HHHHHHHHTCCC-----------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHcCCCC-----------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 22 122211111100 01113456789999999999999999999999999998775
No 24
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.1e-49 Score=453.14 Aligned_cols=463 Identities=20% Similarity=0.222 Sum_probs=281.0
Q ss_pred CCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCC
Q 002892 7 VPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNL 86 (870)
Q Consensus 7 ~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 86 (870)
||+.+. ++|++|+|++|++++..|..|..+++|++|++++|++++..|..|+.+++|++|+|++|+|+ .+|.. .+
T Consensus 15 ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 89 (520)
T 2z7x_B 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PT 89 (520)
T ss_dssp CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CC
T ss_pred cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--cc
Confidence 444443 45555555555555444445555555555555555555444555555555555555555555 33333 45
Q ss_pred CCCcEEeccCCcccc-ccCcCCCCcCCccEEEeecCccceecCCcccCCCCC--Ceeecccccc--cccccccccccc-c
Q 002892 87 SSLVRLDSRFNSISG-NIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNL--ADLVLALNNL--IGPIPTTIFNIS-T 160 (870)
Q Consensus 87 ~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L--~~L~L~~n~l--~~~~~~~~~~l~-~ 160 (870)
++|++|+|++|++++ .+|..|+.+++|++|++++|++++ ..+..+++| ++|++++|++ .+..|..+..+. +
T Consensus 90 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~ 166 (520)
T 2z7x_B 90 VNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTE 166 (520)
T ss_dssp CCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEE
T ss_pred CCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccc
Confidence 555555555555543 234455555555555555555543 233444444 5555555555 444444444443 2
Q ss_pred ceEEEeecccccccCCCcccCCCCccceeeecccc-------cccccCCcccCCCCccEEEccCCcccCCCccccc---c
Q 002892 161 IIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANR-------LTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFG---N 230 (870)
Q Consensus 161 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~---~ 230 (870)
...+++++|++.+..+......+++|+.|++++|. +.+.++ .+..+++|+.|++++|.+++..+..+. .
T Consensus 167 ~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~ 245 (520)
T 2z7x_B 167 SLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVW 245 (520)
T ss_dssp EEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHH
T ss_pred eEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhh
Confidence 33444455555444444444445555555555554 443333 444555555555555544432211111 1
Q ss_pred ccccccccccccccccccCCCCCccccccc-----ccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccC
Q 002892 231 LRHLSTLNIRANYLTTETSSNGEWSFLSSL-----TNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSI 305 (870)
Q Consensus 231 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~ 305 (870)
.++|++|++++|.++... +..+ ..+++|+.+++++|.+ .+
T Consensus 246 ~~~L~~L~l~~n~l~~~~--------p~~~~~~~~~~l~~L~~l~l~~n~~---------------------------~~ 290 (520)
T 2z7x_B 246 HTTVWYFSISNVKLQGQL--------DFRDFDYSGTSLKALSIHQVVSDVF---------------------------GF 290 (520)
T ss_dssp TSSCSEEEEEEEEEESCC--------CCCCCCCCSCCCCEEEEEEEEECCC---------------------------CS
T ss_pred hCcccEEEeecccccCcc--------ccchhhcccccCceeEeccccccce---------------------------ec
Confidence 234555555555544211 1112 4445555555555544 23
Q ss_pred c-hhhhCc---cCCcEEEeeCCCccccCCchhhchhhHHHHHhc-CCCCCCCcccccCccccceeecCCcccCC--CCCc
Q 002892 306 P-KEIGNL---RGLIALSLFTNDLNGTIPTTLGRLQQLQALLQR-NNLNGPIPTCLSSLISLRQLHLGSNQLTS--SIPS 378 (870)
Q Consensus 306 ~-~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~-n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~ 378 (870)
| ..+..+ .+|+.|++++|.+.... .+..+++|+.|+++ |.+.+.+|..+..+++|++|+|++|++++ ..|.
T Consensus 291 p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 368 (520)
T 2z7x_B 291 PQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAE 368 (520)
T ss_dssp CTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHH
T ss_pred chhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchH
Confidence 3 333333 45666777776665322 12455666666666 55555677788889999999999999996 4567
Q ss_pred ccccccccceEecCCCccCCCCcc-cccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCC
Q 002892 379 SFWSLEYILRIDLSSNSLSGSLPS-DIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTS 457 (870)
Q Consensus 379 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 457 (870)
.|..+++|+.|++++|.+++.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++
T Consensus 369 ~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~ 445 (520)
T 2z7x_B 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEA 445 (520)
T ss_dssp HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCC
Confidence 899999999999999999985665 488999999999999999988887765 79999999999998 67887889999
Q ss_pred CCeEecCCCcccCCCCcc-hhhccccceeeccCCcccccCCCCCcc-cccccccc--cccccccCCC
Q 002892 458 LEYLDLSNNNLSGEIPKS-FEILSHLKRLNVSHNRLEGKIPTNGPF-RNFLAQSF--LWNYALCGPP 520 (870)
Q Consensus 458 L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~-~~~~~~~~--~~n~~~c~~~ 520 (870)
|+.|+|++|+|+ .+|.. |..+++|+.|++++|+++|.|+.. ++ ..|..... ......|..|
T Consensus 446 L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~-~~~~~~~~~~~~~~~~~~~C~~p 510 (520)
T 2z7x_B 446 LQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI-DYLSRWLNKNSQKEQGSAKCSGS 510 (520)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHH-HHHHHHHHHTTTTEESCCBBTTT
T ss_pred CCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCch-HHHHHHHHhccccCCCCCCcCCc
Confidence 999999999999 56655 999999999999999999998853 33 44443211 2234567665
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.6e-48 Score=450.38 Aligned_cols=483 Identities=24% Similarity=0.261 Sum_probs=405.3
Q ss_pred CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 16 FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
..+.++.++.+++ .+|..+. ++++.|++++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 8 ~~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 8 PNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCc
Confidence 3567888888998 5787653 589999999999998888899999999999999999998778889999999999999
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccc-cccccccccccceEEEeeccccccc
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIG-PIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
+|++++..|..|+.+++|++|++++|++++..+..++++++|++|++++|.+++ .+|..+.++++|++|++++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 999997778899999999999999999997666689999999999999999987 4699999999999999999999987
Q ss_pred CCCcccCCCCcc----ceeeecccccccccCCcccCCCCccEEEccCCcccC-CCcccccccccc---------------
Q 002892 175 RPSTMGHSLPNR----QFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSG-QIPNTFGNLRHL--------------- 234 (870)
Q Consensus 175 ~~~~~~~~l~~L----~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L--------------- 234 (870)
.+..+. .+.+| +.|++++|.+++..+..+... +|++|++++|.... ..+..+.+++++
T Consensus 165 ~~~~~~-~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~ 242 (570)
T 2z63_A 165 YCTDLR-VLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN 242 (570)
T ss_dssp CGGGGH-HHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS
T ss_pred cHHHcc-chhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh
Confidence 766554 35666 789999999998888888766 89999999984321 122223333333
Q ss_pred -----------------cccccccc-ccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhc
Q 002892 235 -----------------STLNIRAN-YLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYA 296 (870)
Q Consensus 235 -----------------~~L~L~~N-~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l 296 (870)
+.+++++| .+... .+..+..+++|++|++++|.+.. .|+.+... .++.|++
T Consensus 243 l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~--------~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~--~L~~L~l 311 (570)
T 2z63_A 243 LEKFDKSALEGLCNLTIEEFRLAYLDYYLDD--------IIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF--GWQHLEL 311 (570)
T ss_dssp CEECCTTTTGGGGGSEEEEEEEEETTEEESC--------STTTTGGGTTCSEEEEESCEECS-CCBCCSCC--CCSEEEE
T ss_pred hhhcchhhhccccccchhhhhhhcchhhhhh--------chhhhcCcCcccEEEecCccchh-hhhhhccC--CccEEee
Confidence 33344443 22221 24567889999999999999986 56666665 8999999
Q ss_pred ccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCC-CCCCC--cccccCccccceeecCCcccC
Q 002892 297 HECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNN-LNGPI--PTCLSSLISLRQLHLGSNQLT 373 (870)
Q Consensus 297 ~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~-~~~~~--p~~~~~l~~L~~L~Ls~N~l~ 373 (870)
++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|+.|++++| +.+.. |..+..+++|++|++++|+++
T Consensus 312 ~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~ 386 (570)
T 2z63_A 312 VNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 386 (570)
T ss_dssp ESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEE
T ss_pred ccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccc
Confidence 999998 5555 5789999999999999876665 78899999999954 44333 678899999999999999999
Q ss_pred CCCCcccccccccceEecCCCccCCCCc-ccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCccc-Cccccc
Q 002892 374 SSIPSSFWSLEYILRIDLSSNSLSGSLP-SDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQ-DSIPDS 451 (870)
Q Consensus 374 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~ 451 (870)
+..+. |..+++|+.|++++|.+++..| ..|.++++|++|++++|++++..|..|.++++|+.|++++|.+. +.+|..
T Consensus 387 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~ 465 (570)
T 2z63_A 387 TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465 (570)
T ss_dssp EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhh
Confidence 66555 9999999999999999997666 57899999999999999999999999999999999999999998 578999
Q ss_pred ccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCC-CcccccccccccccccccCCC
Q 002892 452 FGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTN-GPFRNFLAQSFLWNYALCGPP 520 (870)
Q Consensus 452 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 520 (870)
|..+++|+.|+|++|++++..|..|..+++|+.|++++|++++.+|.. ..+.......+.+|+..|.-|
T Consensus 466 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999999999999999999888999999999999999999999887752 344455555677887777644
No 26
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-48 Score=404.02 Aligned_cols=244 Identities=22% Similarity=0.378 Sum_probs=195.6
Q ss_pred CCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee----CCeeEEEE
Q 002892 588 NECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN----LDFKALVL 660 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 660 (870)
++.+.||+|+||+||+|.+. +++.||+|++.... ....+.+.+|++++++++|||||++++++.. .+..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999965 68999999997543 3456779999999999999999999999865 34679999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeCC-CCceEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLDK-NMTARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~ 737 (870)
|||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998654 4899999999999999999999 555 999999999999974 79999999999986432
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.......||+.|||||++.+ .|+.++|||||||++|||+||+.||.+..... .+...+.....
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~~----------- 247 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVK----------- 247 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCC-----------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCCC-----------
Confidence 12334579999999999865 69999999999999999999999997532211 11111110000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+...+..++.++.+++.+||+.||++|||++|+++
T Consensus 248 -----~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 -----PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -----CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00001112346889999999999999999999975
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=424.32 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=208.3
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
.+.|++.+.||+|+||+||+|+.. +|+.||||++........+.+.+|++++++++|||||++++++.+.+..|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999965 6999999999876555556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
|+||+|.+++...+ +++..+..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|..+.... .
T Consensus 230 ~~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 302 (423)
T 4fie_A 230 LEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 302 (423)
T ss_dssp CTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--C
T ss_pred CCCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--c
Confidence 99999999997644 899999999999999999999 6679999999999999999999999999998764332 2
Q ss_pred cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccC
Q 002892 743 TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQ 822 (870)
Q Consensus 743 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (870)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ......+....+....
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~~~~~~------------ 368 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPRLK------------ 368 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCCCCS------------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCCCCCCc------------
Confidence 23456799999999999999999999999999999999999999975211 1111111111111100
Q ss_pred cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 823 PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 823 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
....++..+.+++.+||..||++|||+.|+++
T Consensus 369 ---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01123456889999999999999999999976
No 28
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.7e-48 Score=459.81 Aligned_cols=442 Identities=18% Similarity=0.218 Sum_probs=273.7
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEc-cCCcccccCCccc----------------------------------
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGF-AYNDLTGSFPSWI---------------------------------- 59 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l-~~n~l~~~~~~~~---------------------------------- 59 (870)
.+++.|+|++|++.+.+|..|+.|++|++|+| ++|.+.|..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 46888899999998888888899999999999 8887766533110
Q ss_pred -----------------cCCCCCCEEEcCC--CccccCCCCCCCCCCCCcEEeccCCcccc-----------------cc
Q 002892 60 -----------------GVFSKLQVLSLRN--NSFTGPIPNSLFNLSSLVRLDSRFNSISG-----------------NI 103 (870)
Q Consensus 60 -----------------~~l~~L~~L~L~~--n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-----------------~~ 103 (870)
.....++.+.+.. |++++ +|..++++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1112333344433 77775 77777778888888888888776 27
Q ss_pred CcCCC--CcCCccEEEeecCccceecCCcccCCCCCCeeeccccc-ccc-cccccccccc-------cceEEEeeccccc
Q 002892 104 PSKIG--NLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNN-LIG-PIPTTIFNIS-------TIIIINLVGNQLS 172 (870)
Q Consensus 104 ~~~~~--~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l~-------~L~~L~l~~N~l~ 172 (870)
|..++ ++++|++|+|++|++.+.+|..++++++|+.|+|++|+ +++ .+|..+.+++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 77766 77778888887777777777777777778888887777 766 6777666665 7777777777777
Q ss_pred ccCCC--cccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccc-cccccccccccccccC
Q 002892 173 GHRPS--TMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRH-LSTLNIRANYLTTETS 249 (870)
Q Consensus 173 ~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~ 249 (870)
.+|. .+. .+++|+.|+|++|+++ .+| .|..+++|++|+|++|+++ .+|..|.++++ |+.|+|++|.++.++
T Consensus 562 -~ip~~~~l~-~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp- 635 (876)
T 4ecn_A 562 -EFPASASLQ-KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIP- 635 (876)
T ss_dssp -BCCCHHHHT-TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCC-
T ss_pred -ccCChhhhh-cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCc-
Confidence 5555 333 4677777777777777 566 6777777777777777777 66667777777 777777777776543
Q ss_pred CCCCcccccccccc--cccceEEcCCCCCCCCCCccccccc----cchhhhhcccccccccCchhh-hCccCCcEEEeeC
Q 002892 250 SNGEWSFLSSLTNC--NKLRALSLGSNPLDSILPPLIGNFS----ASFQQFYAHECKLKGSIPKEI-GNLRGLIALSLFT 322 (870)
Q Consensus 250 ~~~~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~~~----~~l~~l~l~~n~l~~~~~~~l-~~l~~L~~L~L~~ 322 (870)
..+..+ ++|+.|++++|++.+.+|....... .+|+.|++++|.++ .+|..+ ..+++|+.|+|++
T Consensus 636 --------~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~ 706 (876)
T 4ecn_A 636 --------NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSN 706 (876)
T ss_dssp --------SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCS
T ss_pred --------hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCC
Confidence 223333 3477777777777665443221110 13444444444444 222222 2344444444444
Q ss_pred CCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccc--cccccceEecCCCccCCCC
Q 002892 323 NDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFW--SLEYILRIDLSSNSLSGSL 400 (870)
Q Consensus 323 N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~ 400 (870)
|++. .+|..+... .+..+.++++|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +
T Consensus 707 N~L~-~ip~~~~~~---------------~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 707 NLMT-SIPENSLKP---------------KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp CCCS-CCCTTSSSC---------------TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred CcCC-ccChHHhcc---------------ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 4444 222211100 0001223346666666666666 4555554 66666666666666664 5
Q ss_pred cccccCCccCCEEEccC------CccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCc
Q 002892 401 PSDIQNLKVLIYLNLSR------NQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPK 474 (870)
Q Consensus 401 p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 474 (870)
|..+.++++|+.|+|++ |++.+.+|..|.++++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+.
T Consensus 769 p~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 769 PTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp CCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECG
T ss_pred chhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChH
Confidence 66666666666666654 555555666666666666666666666 34555444 4566666666666555555
Q ss_pred chhhccccceeeccCCccc
Q 002892 475 SFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 475 ~~~~l~~L~~L~ls~N~l~ 493 (870)
.+.....+..+.|++|++.
T Consensus 846 ~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 846 SVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp GGHHHHHTTCCEEECCTTS
T ss_pred HccccccchheeecCCCcc
Confidence 5555555555556555544
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.7e-49 Score=463.13 Aligned_cols=434 Identities=19% Similarity=0.253 Sum_probs=347.4
Q ss_pred CCCccCCCCCCCCCCCCeecCCCCccc------c------CCCccccCCCCCcEEEccCCcccccCCccccCC-------
Q 002892 2 SLGGTVPPHIGNLSFLMYLDISENNFR------G------YLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVF------- 62 (870)
Q Consensus 2 ~~~~~~p~~~~~l~~L~~L~ls~n~l~------~------~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l------- 62 (870)
.++|++|+++++|++|++|||++|.+. + .+|... +..|+ +++++|.+.+.+|..++.+
T Consensus 92 ~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~ 168 (636)
T 4eco_A 92 GASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINS 168 (636)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHH
T ss_pred ccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhc
Confidence 578999999999999999999999762 2 234333 45566 7778887777666665521
Q ss_pred ------------CCCCEEEcC--CCccccCCCCCCCCCCCCcEEeccCCccccc-----------------cCcCCC--C
Q 002892 63 ------------SKLQVLSLR--NNSFTGPIPNSLFNLSSLVRLDSRFNSISGN-----------------IPSKIG--N 109 (870)
Q Consensus 63 ------------~~L~~L~L~--~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-----------------~~~~~~--~ 109 (870)
..++.+.+. +|++++ +|..++++++|++|+|++|++++. +|..++ +
T Consensus 169 ~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~ 247 (636)
T 4eco_A 169 DPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDN 247 (636)
T ss_dssp CTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred CccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcc
Confidence 122222222 578887 888888888899999998888875 888888 8
Q ss_pred cCCccEEEeecCccceecCCcccCCCCCCeeeccccc-ccc-ccccccccc------ccceEEEeecccccccCCC--cc
Q 002892 110 LTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNN-LIG-PIPTTIFNI------STIIIINLVGNQLSGHRPS--TM 179 (870)
Q Consensus 110 l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~l~~N~l~~~~~~--~~ 179 (870)
+++|++|+|++|++.+.+|..++++++|++|++++|+ +++ .+|..+.++ ++|++|++++|+++ .+|. .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 8899999999998888888888888999999999888 877 788888876 88999999999888 6666 44
Q ss_pred cCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccc-cccccccccccccccCCCCCccccc
Q 002892 180 GHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRH-LSTLNIRANYLTTETSSNGEWSFLS 258 (870)
Q Consensus 180 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~~ 258 (870)
. .+++|++|++++|++++.+| .+..+++|++|++++|+++ .+|..|.++++ |++|++++|.++.++.
T Consensus 327 ~-~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~--------- 394 (636)
T 4eco_A 327 Q-KMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIPN--------- 394 (636)
T ss_dssp T-TCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCCS---------
T ss_pred c-cCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccch---------
Confidence 3 57889999999999988888 8888889999999999888 67888888888 9999999998886542
Q ss_pred cccc--ccccceEEcCCCCCCCCCCccccc------cccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCC
Q 002892 259 SLTN--CNKLRALSLGSNPLDSILPPLIGN------FSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIP 330 (870)
Q Consensus 259 ~l~~--l~~L~~L~L~~N~l~~~~~~~~~~------~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 330 (870)
.+.. +++|++|++++|++.+..|..+.. ....++.|++++|+++...+..+..+++|+.|++++|+++ .+|
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~ 473 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIP 473 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCC
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcC
Confidence 3343 348899999999998887777661 1237888899999988544445667999999999999999 455
Q ss_pred ch-hhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccc--cccccceEecCCCccCCCCcccccCC
Q 002892 331 TT-LGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFW--SLEYILRIDLSSNSLSGSLPSDIQNL 407 (870)
Q Consensus 331 ~~-~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l 407 (870)
.. +... +..+..+++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++
T Consensus 474 ~~~~~~~----------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 535 (636)
T 4eco_A 474 KNSLKDE----------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNS 535 (636)
T ss_dssp SSSSEET----------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred HHHhccc----------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcC
Confidence 43 2211 122445669999999999999 6777776 99999999999999997 89999999
Q ss_pred ccCCEEEc------cCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCc
Q 002892 408 KVLIYLNL------SRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPK 474 (870)
Q Consensus 408 ~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 474 (870)
++|+.|+| ++|++.+.+|..|+++++|+.|+|++|++ +.+|..+. ++|+.|+|++|++......
T Consensus 536 ~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~~~ 605 (636)
T 4eco_A 536 STLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISIDLS 605 (636)
T ss_dssp SSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEECT
T ss_pred CCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccccHH
Confidence 99999999 56888999999999999999999999999 56787766 8999999999988744433
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.3e-48 Score=396.70 Aligned_cols=246 Identities=25% Similarity=0.403 Sum_probs=189.8
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||+||+|+.. +|+.||+|++++.. ......+.+|++++++++|||||++++++.+.+..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 368999999999999999999954 79999999997543 23356789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+ +|+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+||++++++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 689999998655 4999999999999999999999 6679999999999999999999999999998664322
Q ss_pred CcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
......||+.|+|||++.+..+ +.++||||+||++|||+||+.||.+... ......+..... . +
T Consensus 167 ---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~~~~i~~~~~-~-~--------- 231 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVLFKNISNGVY-T-L--------- 231 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC-C-C---------
T ss_pred ---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCCC-C-C---------
Confidence 2334679999999999988876 5799999999999999999999975211 111111111100 0 0
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+...+..+.+++.+|++.||++|||+.|+++
T Consensus 232 --------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 --------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --------CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0112346889999999999999999999986
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.7e-47 Score=442.85 Aligned_cols=484 Identities=19% Similarity=0.216 Sum_probs=394.0
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
.-..|+++++++ .+|..+. ++|++|++++|++++..|..|+.+++|++|+|++|+|++..|..|+++++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 344688999998 6787664 7999999999999988899999999999999999999988888999999999999999
Q ss_pred CccccccCcCCCCcCCccEEEeecCcccee-cCCcccCCCCCCeeecccccccccc-cccccccccceEEEeeccccccc
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGE-IPNEIGNLKNLADLVLALNNLIGPI-PTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
|++++..|..|+.+++|++|++++|++++. .|..++++++|++|++++|++.+.+ +..+.++++|++|++++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 999977777799999999999999999963 5678999999999999999954444 46899999999999999999998
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCC--c-cccccccccccccccccccccccCCC
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQI--P-NTFGNLRHLSTLNIRANYLTTETSSN 251 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--~-~~~~~l~~L~~L~L~~N~l~~~~~~~ 251 (870)
.|..+. .+++|+.|+++.|.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.++.....
T Consensus 164 ~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~- 241 (549)
T 2z81_A 164 QSQSLK-SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN- 241 (549)
T ss_dssp CTTTTT-TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHH-
T ss_pred Chhhhh-ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHH-
Confidence 888776 4899999999999998543334467899999999999998642 2 2345678999999999998763321
Q ss_pred CCcccccccccccccceEEcCCCCCCCCCC------ccccccccchhhhhcccccccc-----cCchhhhCccCCcEEEe
Q 002892 252 GEWSFLSSLTNCNKLRALSLGSNPLDSILP------PLIGNFSASFQQFYAHECKLKG-----SIPKEIGNLRGLIALSL 320 (870)
Q Consensus 252 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~------~~~~~~~~~l~~l~l~~n~l~~-----~~~~~l~~l~~L~~L~L 320 (870)
.+...+..+++|+.|++++|.+.+... ..+. ....++.+.+.++.+.. .++..+....+|+.|++
T Consensus 242 ---~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~-~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l 317 (549)
T 2z81_A 242 ---ELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVS-ELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITV 317 (549)
T ss_dssp ---HHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCC-CCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEE
T ss_pred ---HHHHHhhhhccccccccccccccccccccccchhhhh-hhcccccccccccccchhhhcccchhhhhhcccceEEEe
Confidence 233456778899999999998776421 1111 12356677777776543 22333455678999999
Q ss_pred eCCCccccCCchh-hchhhHHHHHhc-CCCCCCCc---ccccCccccceeecCCcccCCCCC--cccccccccceEecCC
Q 002892 321 FTNDLNGTIPTTL-GRLQQLQALLQR-NNLNGPIP---TCLSSLISLRQLHLGSNQLTSSIP--SSFWSLEYILRIDLSS 393 (870)
Q Consensus 321 ~~N~l~~~~~~~~-~~l~~L~~L~l~-n~~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~ 393 (870)
++|.+. .+|..+ ..+++|+.|+++ |.+.+.+| ..++.+++|++|+|++|++++..+ ..+..+++|++|++++
T Consensus 318 ~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~ 396 (549)
T 2z81_A 318 ENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISR 396 (549)
T ss_dssp ESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTT
T ss_pred ccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCC
Confidence 999998 566665 689999999998 66666554 347889999999999999986643 5689999999999999
Q ss_pred CccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCC
Q 002892 394 NSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIP 473 (870)
Q Consensus 394 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 473 (870)
|+++ .+|..+..+++|++|+|++|++++ +|..+. ++|+.|+|++|++++.. ..+++|++|+|++|+|+ .+|
T Consensus 397 N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip 467 (549)
T 2z81_A 397 NTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLP 467 (549)
T ss_dssp CCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCC
T ss_pred CCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCC
Confidence 9999 688899999999999999999984 444432 68999999999998743 57899999999999999 677
Q ss_pred cchhhccccceeeccCCcccccCCCC-CcccccccccccccccccCCC
Q 002892 474 KSFEILSHLKRLNVSHNRLEGKIPTN-GPFRNFLAQSFLWNYALCGPP 520 (870)
Q Consensus 474 ~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 520 (870)
. ...+++|+.|+|++|++++.+|.. ..+.......+.+|++.|+-|
T Consensus 468 ~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 468 D-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp C-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred C-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 6 568999999999999999987752 344445555677888777533
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.8e-46 Score=444.50 Aligned_cols=493 Identities=20% Similarity=0.209 Sum_probs=377.3
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
+||+.+. +++++|||++|+|++..|.+|.++++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.+
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 4665543 47899999999998777778999999999999999998777788999999999999999998666667899
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCcccee-cCCcccCCCCCCeeecccccccccccccccccccc---
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGE-IPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTI--- 161 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--- 161 (870)
+++|++|+|++|++++..+..|+++++|++|+|++|.+++. .|..++.+++|++|++++|++++..+..+..+.++
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~ 202 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 202 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhh
Confidence 99999999999999866666789999999999999998753 57778889999999999999988888887776554
Q ss_pred -eEEEeecccccccCCCcccCCCCccceeeecccccccc-----------------------------------------
Q 002892 162 -IIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGT----------------------------------------- 199 (870)
Q Consensus 162 -~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~----------------------------------------- 199 (870)
..++++.|.++...+..+. ...+..+++.+|.....
T Consensus 203 ~~~~~ls~n~l~~i~~~~~~--~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 280 (635)
T 4g8a_A 203 NLSLDLSLNPMNFIQPGAFK--EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 280 (635)
T ss_dssp CCEEECTTCCCCEECTTTTT--TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGG
T ss_pred hhhhhcccCcccccCccccc--chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccc
Confidence 3678888888765554432 23444555555432210
Q ss_pred -----------------cCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccccccccc
Q 002892 200 -----------------IPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTN 262 (870)
Q Consensus 200 -----------------~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 262 (870)
.+..+....+++.+++.+|.+... ..+.....|+.|++.+|.+..+. ...
T Consensus 281 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~-----------~~~ 347 (635)
T 4g8a_A 281 LTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFP-----------TLK 347 (635)
T ss_dssp SEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCC-----------CCB
T ss_pred hhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcC-----------ccc
Confidence 111223334455555555554422 12444455666666666655432 123
Q ss_pred ccccceEEcCCCCCCCCCCccccccccchhhhhccccccc--ccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHH
Q 002892 263 CNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLK--GSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQ 340 (870)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 340 (870)
+..|+.++++.|.+...... .. ..+++.++++.|.+. +..+..+..+.+|+.+++..|.+.. .+..+..+++|+
T Consensus 348 l~~L~~l~l~~n~~~~~~~~--~~-l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~ 423 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNAFSE--VD-LPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLE 423 (635)
T ss_dssp CTTCCEEEEESCCSCCBCCC--CB-CTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCC
T ss_pred chhhhhcccccccCCCCccc--cc-ccccccchhhccccccccccccchhhhhhhhhhhcccccccc-cccccccccccc
Confidence 45666777777766543221 11 246778888888775 3567778888899999999998874 566778888888
Q ss_pred HHHhc-CCCCCCCc-ccccCccccceeecCCcccCCCCCcccccccccceEecCCCcc-CCCCcccccCCccCCEEEccC
Q 002892 341 ALLQR-NNLNGPIP-TCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSL-SGSLPSDIQNLKVLIYLNLSR 417 (870)
Q Consensus 341 ~L~l~-n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~ 417 (870)
.+++. ++.....+ ..+..+++++.+++++|.+.+..+..+..++.|+.|+|++|.+ .+..|..|..+++|++|+|++
T Consensus 424 ~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~ 503 (635)
T 4g8a_A 424 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503 (635)
T ss_dssp EEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCC
Confidence 88776 55554443 5688899999999999999999999999999999999999985 446788999999999999999
Q ss_pred CccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhc-cccceeeccCCcccccC
Q 002892 418 NQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEIL-SHLKRLNVSHNRLEGKI 496 (870)
Q Consensus 418 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~ 496 (870)
|+|++..|..|+++++|+.|+|++|+|++..|..|.++++|+.|||++|+|++..|..|..+ ++|+.|+|++|+|+|.|
T Consensus 504 N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 504 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999988 68999999999999999
Q ss_pred CCCCccccccccc----ccccccccCCC
Q 002892 497 PTNGPFRNFLAQS----FLWNYALCGPP 520 (870)
Q Consensus 497 p~~~~~~~~~~~~----~~~n~~~c~~~ 520 (870)
.. .+|..|.... .......|..|
T Consensus 584 ~~-~~~~~wl~~~~~~~~~~~~~~C~~P 610 (635)
T 4g8a_A 584 EH-QSFLQWIKDQRQLLVEVERMECATP 610 (635)
T ss_dssp GG-HHHHHHHHHTTTTBSCGGGCBBCSS
T ss_pred Cc-HHHHHHHHhCCCccCCCCCceeCCc
Confidence 74 4566664321 12234567665
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.3e-47 Score=437.67 Aligned_cols=454 Identities=20% Similarity=0.239 Sum_probs=355.0
Q ss_pred CeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCC
Q 002892 18 MYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFN 97 (870)
Q Consensus 18 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 97 (870)
++||+++|+++ .+|..+. ++|++|++++|.+++..|..|..+++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 5787666 89999999999999777788999999999999999999777889999999999999999
Q ss_pred ccccccCcCCCCcCCccEEEeecCccce-ecCCcccCCCCCCeeecccccccccccccccccccc--eEEEeecccc--c
Q 002892 98 SISGNIPSKIGNLTKLVHLNFADNNLRG-EIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTI--IIINLVGNQL--S 172 (870)
Q Consensus 98 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~l~~N~l--~ 172 (870)
+|+ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56665 78999999999999986 367889999999999999999875 456777777 9999999988 6
Q ss_pred ccCCCcccCCCCccceeeecccccccccCC-cccCCCCccEEEccCCc-------ccCCCcccccccccccccccccccc
Q 002892 173 GHRPSTMGHSLPNRQFLLLWANRLTGTIPN-SITNASKLIGLDLNSNS-------LSGQIPNTFGNLRHLSTLNIRANYL 244 (870)
Q Consensus 173 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~-------i~~~~~~~~~~l~~L~~L~L~~N~l 244 (870)
+..|..+..--.....+++++|++.+.++. .+..+++|+.|++++|. +.+.++ .|..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 666666543222344567777777655443 56677778888887776 554444 577777777777777766
Q ss_pred ccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhh-----hCccCCcEEE
Q 002892 245 TTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEI-----GNLRGLIALS 319 (870)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l-----~~l~~L~~L~ 319 (870)
+..... .++. ...+++|++|++++|++. +.+|..+ ..+++|+.++
T Consensus 233 ~~~~~~----~~~~-~~~~~~L~~L~l~~n~l~-------------------------~~~p~~~~~~~~~~l~~L~~l~ 282 (520)
T 2z7x_B 233 TWNSFI----RILQ-LVWHTTVWYFSISNVKLQ-------------------------GQLDFRDFDYSGTSLKALSIHQ 282 (520)
T ss_dssp EHHHHH----HHHH-HHHTSSCSEEEEEEEEEE-------------------------SCCCCCCCCCCSCCCCEEEEEE
T ss_pred CHHHHH----HHHH-HhhhCcccEEEeeccccc-------------------------CccccchhhcccccCceeEecc
Confidence 642100 0000 111346666666666555 3455555 7899999999
Q ss_pred eeCCCccccCC-chhhch---hhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCc
Q 002892 320 LFTNDLNGTIP-TTLGRL---QQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNS 395 (870)
Q Consensus 320 L~~N~l~~~~~-~~~~~l---~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 395 (870)
+++|.+ .+| ..+..+ .+|+.|+++++-....+ .+..+++|++|++++|++++..|..+..+++|++|++++|+
T Consensus 283 l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 359 (520)
T 2z7x_B 283 VVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ 359 (520)
T ss_dssp EEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSC
T ss_pred ccccce--ecchhhhhcccccCceeEEEcCCCcccccc-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCc
Confidence 999999 455 566655 56888888855433332 12678999999999999999899999999999999999999
Q ss_pred cCC--CCcccccCCccCCEEEccCCccCCcccc-cccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCC
Q 002892 396 LSG--SLPSDIQNLKVLIYLNLSRNQLSGNIPI-TIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEI 472 (870)
Q Consensus 396 l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 472 (870)
+++ .+|..+..+++|++|+|++|++++.+|. .+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+
T Consensus 360 l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~i 436 (520)
T 2z7x_B 360 LKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SI 436 (520)
T ss_dssp CCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CC
T ss_pred cCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-cc
Confidence 996 4567899999999999999999984554 589999999999999999988887765 79999999999999 88
Q ss_pred CcchhhccccceeeccCCcccccCCCC--CcccccccccccccccccC
Q 002892 473 PKSFEILSHLKRLNVSHNRLEGKIPTN--GPFRNFLAQSFLWNYALCG 518 (870)
Q Consensus 473 p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~~~~~~~~~~~n~~~c~ 518 (870)
|..+..+++|+.|+|++|++++ +|.. ..+.......+.+|+..|.
T Consensus 437 p~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 437 PKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp CGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred chhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCccc
Confidence 8888899999999999999995 5543 2333444455677877665
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.5e-48 Score=403.40 Aligned_cols=247 Identities=25% Similarity=0.306 Sum_probs=194.9
Q ss_pred cCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
++|++.+.||+|+||+||+|+.. +++.||+|++++.. .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 47889999997543 2223467889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||++||+|.+++.+.+. +++.++..++.||+.||+||| +++|+||||||+|||++++|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999999987554 899999999999999999999 667999999999999999999999999999865322
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
. .......||+.|||||++.+..|+.++||||+||++|||+||+.||.+.... .....+.....+ .
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~--~--------- 245 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLG--M--------- 245 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--C---------
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHHHHcCCCC--C---------
Confidence 2 2233467999999999999999999999999999999999999999763211 111111111000 0
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM-----TDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 857 (870)
+..++.++.+++.+||+.||++|||+ +|+++
T Consensus 246 --------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 246 --------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 01234568899999999999999985 56653
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-46 Score=447.92 Aligned_cols=428 Identities=19% Similarity=0.221 Sum_probs=342.2
Q ss_pred CCCccCCCCCCCCCCCCeecC-CCCccccCCCccc---------------------------------------------
Q 002892 2 SLGGTVPPHIGNLSFLMYLDI-SENNFRGYLPNEL--------------------------------------------- 35 (870)
Q Consensus 2 ~~~~~~p~~~~~l~~L~~L~l-s~n~l~~~~p~~~--------------------------------------------- 35 (870)
.++|++|+++++|++|++||| ++|.+.+..|-..
T Consensus 334 ~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 578999999999999999999 8888766533210
Q ss_pred ------cCCCCCcEEEccC--CcccccCCccccCCCCCCEEEcCCCcccc-----------------CCCCCCC--CCCC
Q 002892 36 ------GQLRRLKFLGFAY--NDLTGSFPSWIGVFSKLQVLSLRNNSFTG-----------------PIPNSLF--NLSS 88 (870)
Q Consensus 36 ------~~l~~L~~L~l~~--n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-----------------~~~~~~~--~l~~ 88 (870)
.....++.+.++. |++++ +|..|+.+++|++|+|++|+|++ .+|..++ ++++
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 1112333444443 78886 88889999999999999999987 2888887 9999
Q ss_pred CcEEeccCCccccccCcCCCCcCCccEEEeecCc-cce-ecCCcccCCC-------CCCeeecccccccccccc--cccc
Q 002892 89 LVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNN-LRG-EIPNEIGNLK-------NLADLVLALNNLIGPIPT--TIFN 157 (870)
Q Consensus 89 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~~~l~~l~-------~L~~L~L~~n~l~~~~~~--~~~~ 157 (870)
|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|+.|+|++|+++ .+|. .+.+
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 9999999999888899999999999999999998 887 6777666655 9999999999998 7787 8899
Q ss_pred cccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCC-ccEEEccCCcccCCCccccccccc--c
Q 002892 158 ISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASK-LIGLDLNSNSLSGQIPNTFGNLRH--L 234 (870)
Q Consensus 158 l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~i~~~~~~~~~~l~~--L 234 (870)
+++|+.|+|++|+++ .+| . ...+++|+.|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..++. |
T Consensus 572 L~~L~~L~Ls~N~l~-~lp-~-~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L 646 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLE-A-FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVM 646 (876)
T ss_dssp CTTCCEEECTTSCCC-BCC-C-CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCE
T ss_pred CCCCCEEECCCCCcc-cch-h-hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCC
Confidence 999999999999998 666 3 346889999999999998 78888999988 999999999998 67888877654 9
Q ss_pred ccccccccccccccCCCCCcccccccc--cccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhC-
Q 002892 235 STLNIRANYLTTETSSNGEWSFLSSLT--NCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGN- 311 (870)
Q Consensus 235 ~~L~L~~N~l~~~~~~~~~~~~~~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~- 311 (870)
+.|+|++|.++...+. ++..+. .+++|+.|++++|++..+ |..+......|+.|++++|+++ .+|..+..
T Consensus 647 ~~L~Ls~N~l~g~ip~-----l~~~l~~~~~~~L~~L~Ls~N~L~~l-p~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~ 719 (876)
T 4ecn_A 647 GSVDFSYNKIGSEGRN-----ISCSMDDYKGINASTVTLSYNEIQKF-PTELFATGSPISTIILSNNLMT-SIPENSLKP 719 (876)
T ss_dssp EEEECCSSCTTTTSSS-----CSSCTTTCCCCCEEEEECCSSCCCSC-CHHHHHTTCCCSEEECCSCCCS-CCCTTSSSC
T ss_pred CEEECcCCcCCCcccc-----chhhhccccCCCcCEEEccCCcCCcc-CHHHHccCCCCCEEECCCCcCC-ccChHHhcc
Confidence 9999999998764321 111222 345899999999999865 4443333357889999999988 56655443
Q ss_pred -------ccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCccccccc
Q 002892 312 -------LRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLE 384 (870)
Q Consensus 312 -------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 384 (870)
+++|+.|+|++|++. .+|..+. ...+++|+.|+|++|+|++ +|..+..++
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~---------------------~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~ 776 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT-SLSDDFR---------------------ATTLPYLSNMDVSYNCFSS-FPTQPLNSS 776 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC-CCCGGGS---------------------TTTCTTCCEEECCSSCCSS-CCCGGGGCT
T ss_pred ccccccccCCccEEECCCCCCc-cchHHhh---------------------hccCCCcCEEEeCCCCCCc-cchhhhcCC
Confidence 338999999999998 4444332 0267788888888888886 688888888
Q ss_pred ccceEecCC------CccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCC
Q 002892 385 YILRIDLSS------NSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSL 458 (870)
Q Consensus 385 ~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 458 (870)
+|+.|+|++ |++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..|.....+
T Consensus 777 ~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~ 853 (876)
T 4ecn_A 777 QLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEA 853 (876)
T ss_dssp TCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHT
T ss_pred CCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccc
Confidence 888888866 888889999999999999999999999 57888776 699999999999998888888877788
Q ss_pred CeEecCCCccc
Q 002892 459 EYLDLSNNNLS 469 (870)
Q Consensus 459 ~~L~L~~N~l~ 469 (870)
..+.|.+|++.
T Consensus 854 ~~~~L~~n~~~ 864 (876)
T 4ecn_A 854 GMYVLLYDKTQ 864 (876)
T ss_dssp TCCEEECCTTS
T ss_pred hheeecCCCcc
Confidence 88899888776
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.1e-46 Score=392.00 Aligned_cols=249 Identities=22% Similarity=0.371 Sum_probs=188.1
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC--------
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD-------- 654 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-------- 654 (870)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999965 78999999997644 344567899999999999999999999987544
Q ss_pred ----eeEEEEecCCCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEec
Q 002892 655 ----FKALVLEFMPNGSLEKWLYSHNY--FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 655 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
..|+||||+++|+|.+++..... ..++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986532 3566778899999999999999 66799999999999999999999999
Q ss_pred cccccccCCCCCc----------ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHH
Q 002892 729 FGISKLLGEDDDS----------VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLK 798 (870)
Q Consensus 729 fg~a~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 798 (870)
||+|+........ ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||..... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HHH
Confidence 9999877543221 12234579999999999999999999999999999999996 7753111 111
Q ss_pred HHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 799 HWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+.... ..............+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~---------------~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TLTDVR---------------NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHH---------------TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHh---------------cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111000 00001112223345678999999999999999999986
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.1e-46 Score=431.55 Aligned_cols=463 Identities=19% Similarity=0.190 Sum_probs=366.2
Q ss_pred CCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 14 LSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 14 l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
....+++|+++|++++ +|..+. ++|++|++++|.+++..|..|+.+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 3445899999999994 787664 8999999999999977778999999999999999999988888999999999999
Q ss_pred ccCCccccccCcCCCCcCCccEEEeecCcccee-cCCcccCCCCCCeeecccccccccccccccccccc--eEEEeeccc
Q 002892 94 SRFNSISGNIPSKIGNLTKLVHLNFADNNLRGE-IPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTI--IIINLVGNQ 170 (870)
Q Consensus 94 L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~l~~N~ 170 (870)
|++|+|+ .+|.. .+++|++|++++|++++. .|..++++++|++|++++|++++. .+..+++| ++|++++|+
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESS
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccc
Confidence 9999998 67766 899999999999999963 368899999999999999999763 45555555 999999999
Q ss_pred c--cccCCCcccCCCCccceeeecccccccccCC-cccCCCCccEEEccCCc-----ccCCCcccccccccccccccccc
Q 002892 171 L--SGHRPSTMGHSLPNRQFLLLWANRLTGTIPN-SITNASKLIGLDLNSNS-----LSGQIPNTFGNLRHLSTLNIRAN 242 (870)
Q Consensus 171 l--~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~-----i~~~~~~~~~~l~~L~~L~L~~N 242 (870)
+ ++..|..+..--...-.+++++|.+.+.+++ .+..+++|+.|++++|+ +.+ ....|..+++|+.|+++++
T Consensus 181 l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 181 YHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEE
T ss_pred ccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCC
Confidence 9 7777777654211233668888988875544 46678899999999985 221 2345778888888888888
Q ss_pred ccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccc----ccccchhhhhcccccccccCc-hhhhCc---cC
Q 002892 243 YLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIG----NFSASFQQFYAHECKLKGSIP-KEIGNL---RG 314 (870)
Q Consensus 243 ~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~----~~~~~l~~l~l~~n~l~~~~~-~~l~~l---~~ 314 (870)
.++..... ..+ ......+|++|++++|++.+..|..+. .-...++.+++..+.+ .+| ..+..+ .+
T Consensus 260 ~l~~~~~~----~~~-~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~ 332 (562)
T 3a79_B 260 ETTWKCSV----KLF-QFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMN 332 (562)
T ss_dssp EECHHHHH----HHH-HHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCC
T ss_pred cCcHHHHH----HHH-HhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCc
Confidence 77642110 011 122335899999999999876666552 1113444455555555 344 333333 67
Q ss_pred CcEEEeeCCCccccCCchhhchhhHHHHHhc-CCCCCCCcccccCccccceeecCCcccCCCC--CcccccccccceEec
Q 002892 315 LIALSLFTNDLNGTIPTTLGRLQQLQALLQR-NNLNGPIPTCLSSLISLRQLHLGSNQLTSSI--PSSFWSLEYILRIDL 391 (870)
Q Consensus 315 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~-n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L 391 (870)
|+.|++++|.+.... .+..+++|++|+++ |.+.+.+|..+..+++|++|+|++|++++.. |..|..+++|+.|++
T Consensus 333 L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l 410 (562)
T 3a79_B 333 IKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDV 410 (562)
T ss_dssp CSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEEC
T ss_pred ceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEEC
Confidence 999999999986432 12678888899888 6677778999999999999999999999743 567999999999999
Q ss_pred CCCccCCCCcc-cccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccC
Q 002892 392 SSNSLSGSLPS-DIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSG 470 (870)
Q Consensus 392 s~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 470 (870)
++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|+
T Consensus 411 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~- 486 (562)
T 3a79_B 411 SLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK- 486 (562)
T ss_dssp TTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-
T ss_pred CCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-
Confidence 99999984554 588999999999999999987777665 79999999999998 57777779999999999999999
Q ss_pred CCCcc-hhhccccceeeccCCcccccCCCC
Q 002892 471 EIPKS-FEILSHLKRLNVSHNRLEGKIPTN 499 (870)
Q Consensus 471 ~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~ 499 (870)
.+|.. |..+++|+.|++++|+|+|.||..
T Consensus 487 ~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 487 SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp CCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 56665 999999999999999999999853
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.2e-44 Score=404.28 Aligned_cols=401 Identities=18% Similarity=0.217 Sum_probs=249.1
Q ss_pred eecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCC-CCCCCCCCCCcEEeccCC
Q 002892 19 YLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPI-PNSLFNLSSLVRLDSRFN 97 (870)
Q Consensus 19 ~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n 97 (870)
.++.++++++ .+|. + .++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.+ +..|.++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4455555554 3443 1 144555555555555444444555555555555555443222 233444444444444444
Q ss_pred ccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCC
Q 002892 98 SISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPS 177 (870)
Q Consensus 98 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 177 (870)
++++..|..|+++++|++|+|++|++++..+.. ..+..+++|++|+|++|++++..|.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~----------------------~~~~~l~~L~~L~L~~n~l~~~~~~ 147 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSG----------------------NFFKPLTSLEMLVLRDNNIKKIQPA 147 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHS----------------------STTTTCTTCCEEECCSSBCCSCCCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCc----------------------ccccCcccCCEEECCCCccCccCcc
Confidence 444444444444444444444444444322221 1133444444444444444433333
Q ss_pred cccCCCCccceeeecccccccccCCcccCC--CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcc
Q 002892 178 TMGHSLPNRQFLLLWANRLTGTIPNSITNA--SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWS 255 (870)
Q Consensus 178 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 255 (870)
.+...+++|++|++++|++++..+..+..+ .+|+.|++++|.+.+..+..++ +.
T Consensus 148 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~------------------------~~ 203 (455)
T 3v47_A 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG------------------------WE 203 (455)
T ss_dssp GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT------------------------HH
T ss_pred cccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc------------------------cc
Confidence 222223333333333333333333333333 4555666666655543333221 11
Q ss_pred cccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhC---ccCCcEEEeeCCCccccCCch
Q 002892 256 FLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGN---LRGLIALSLFTNDLNGTIPTT 332 (870)
Q Consensus 256 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~---l~~L~~L~L~~N~l~~~~~~~ 332 (870)
....+..+++|++|++++|++.+..| ..+.. .++|+.|++++|.+.+....
T Consensus 204 ~~~~~~~~~~L~~L~Ls~n~l~~~~~-------------------------~~~~~~~~~~~L~~L~l~~~~~~~~~~~- 257 (455)
T 3v47_A 204 KCGNPFKNTSITTLDLSGNGFKESMA-------------------------KRFFDAIAGTKIQSLILSNSYNMGSSFG- 257 (455)
T ss_dssp HHCCTTTTCEEEEEECTTSCCCHHHH-------------------------HHHHHHTTTCCEEEEECTTCTTTSCCTT-
T ss_pred ccccccccceeeeEecCCCcccccch-------------------------hhhhccccccceeeEeeccccccccccc-
Confidence 12234455667777777776654322 22222 25677777777765532111
Q ss_pred hhchhhHHHHHhcCCCCCCCcccccC--ccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccC
Q 002892 333 LGRLQQLQALLQRNNLNGPIPTCLSS--LISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVL 410 (870)
Q Consensus 333 ~~~l~~L~~L~l~n~~~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 410 (870)
.+++....+..+.. .++|++|++++|++++..|..|..+++|++|+|++|++++..|..|.++++|
T Consensus 258 ------------~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 325 (455)
T 3v47_A 258 ------------HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHL 325 (455)
T ss_dssp ------------CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ------------hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccC
Confidence 11222222233333 3689999999999999999999999999999999999998889999999999
Q ss_pred CEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCC
Q 002892 411 IYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHN 490 (870)
Q Consensus 411 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 490 (870)
++|+|++|++++..|..|+++++|+.|+|++|++++..|.+|..+++|++|+|++|+|++..+..|..+++|+.|++++|
T Consensus 326 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 405 (455)
T 3v47_A 326 LKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405 (455)
T ss_dssp CEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC
Confidence 99999999999888999999999999999999999988999999999999999999999877778899999999999999
Q ss_pred cccccCCCCCccccccc
Q 002892 491 RLEGKIPTNGPFRNFLA 507 (870)
Q Consensus 491 ~l~~~~p~~~~~~~~~~ 507 (870)
+++|.+|....+..|..
T Consensus 406 ~l~~~~~~~~~l~~~l~ 422 (455)
T 3v47_A 406 PWDCSCPRIDYLSRWLN 422 (455)
T ss_dssp CBCCCTTTTHHHHHHHH
T ss_pred CcccCCCcchHHHHHHH
Confidence 99999997666666654
No 39
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7.7e-44 Score=421.94 Aligned_cols=495 Identities=20% Similarity=0.170 Sum_probs=385.0
Q ss_pred CccCCCCCCCCC---CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCC
Q 002892 4 GGTVPPHIGNLS---FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIP 80 (870)
Q Consensus 4 ~~~~p~~~~~l~---~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 80 (870)
...+|+....+. .-...+.++.+++ .+|..+. +++++|+|++|+|++..+..|..+++|++|+|++|+|++..|
T Consensus 17 ~~~~p~~~~~c~~~~~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~ 93 (635)
T 4g8a_A 17 NSSIPESWEPCVEVVPNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIED 93 (635)
T ss_dssp --------CCSEEEETTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECT
T ss_pred cCCCCCCCCCccccCCCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcCh
Confidence 345666654442 2346778888898 6886653 489999999999997778899999999999999999997777
Q ss_pred CCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccc-cccccccccc
Q 002892 81 NSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIG-PIPTTIFNIS 159 (870)
Q Consensus 81 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~ 159 (870)
.+|.++++|++|+|++|+|++..+..|+++++|++|+|++|+|++..+..|+++++|++|+|++|++++ ..|..+..++
T Consensus 94 ~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~ 173 (635)
T 4g8a_A 94 GAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 173 (635)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred hHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccch
Confidence 789999999999999999996666789999999999999999997777789999999999999999976 4688899999
Q ss_pred cceEEEeecccccccCCCcccC---CCCccceeeecccccccccCCcccCCCCccEEEccCCcccC-CCccccccccccc
Q 002892 160 TIIIINLVGNQLSGHRPSTMGH---SLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSG-QIPNTFGNLRHLS 235 (870)
Q Consensus 160 ~L~~L~l~~N~l~~~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~-~~~~~~~~l~~L~ 235 (870)
+|++|++++|++++..+..+.. .......++++.|.++...+..+ ....++.+++++|.... ..+..+..+..++
T Consensus 174 ~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~ 252 (635)
T 4g8a_A 174 NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLE 252 (635)
T ss_dssp TCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCE
T ss_pred hhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccc
Confidence 9999999999999887766532 12234478999999996555444 44567788888875431 1122233333333
Q ss_pred cccc---------------------------------------------------------cccccccccCCCCCccccc
Q 002892 236 TLNI---------------------------------------------------------RANYLTTETSSNGEWSFLS 258 (870)
Q Consensus 236 ~L~L---------------------------------------------------------~~N~l~~~~~~~~~~~~~~ 258 (870)
...+ .+|.+.. ..
T Consensus 253 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~----------~~ 322 (635)
T 4g8a_A 253 VHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIER----------VK 322 (635)
T ss_dssp EEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEE----------CG
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccc----------cc
Confidence 2222 2222221 12
Q ss_pred ccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccc--cCCchhhch
Q 002892 259 SLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNG--TIPTTLGRL 336 (870)
Q Consensus 259 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l 336 (870)
.+.....|+.|++++|.+..+.+..+ ..++.+.+..|..... .....+++|+.|++++|.+.. ..+..+..+
T Consensus 323 ~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~ 396 (635)
T 4g8a_A 323 DFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT 396 (635)
T ss_dssp GGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSC
T ss_pred ccccchhhhhhhcccccccCcCcccc----hhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhh
Confidence 34455667778888877766554333 3455666666665533 334578899999999999864 456677788
Q ss_pred hhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCC-CcccccccccceEecCCCccCCCCcccccCCccCCEEEc
Q 002892 337 QQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSI-PSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNL 415 (870)
Q Consensus 337 ~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 415 (870)
.+|+.+++..+.....+..+..+++|+.+++++|+..... +..|..+.+++.+++++|.+.+..|..+..+++|+.|+|
T Consensus 397 ~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~L 476 (635)
T 4g8a_A 397 ISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 476 (635)
T ss_dssp SCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred hhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 8888888886666667778889999999999999886554 457899999999999999999999999999999999999
Q ss_pred cCCcc-CCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccc
Q 002892 416 SRNQL-SGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 416 s~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
++|.+ .+..|..|..+++|+.|+|++|+|++..|.+|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++
T Consensus 477 s~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 556 (635)
T 4g8a_A 477 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 556 (635)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCB
T ss_pred hhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCC
Confidence 99985 45678899999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred cCCCCC-cc-cccccccccccccccC
Q 002892 495 KIPTNG-PF-RNFLAQSFLWNYALCG 518 (870)
Q Consensus 495 ~~p~~~-~~-~~~~~~~~~~n~~~c~ 518 (870)
.+|..- .+ .........+|++.|+
T Consensus 557 ~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 557 SKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 888632 12 2333446789999885
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.3e-44 Score=413.56 Aligned_cols=458 Identities=20% Similarity=0.197 Sum_probs=367.2
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEE
Q 002892 38 LRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLN 117 (870)
Q Consensus 38 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 117 (870)
+...+++++++|+++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|..|+++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 444589999999999 5887664 8999999999999977778999999999999999999988899999999999999
Q ss_pred eecCccceecCCcccCCCCCCeeeccccccccc-ccccccccccceEEEeecccccccCCCcccCCCCcc--ceeeeccc
Q 002892 118 FADNNLRGEIPNEIGNLKNLADLVLALNNLIGP-IPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNR--QFLLLWAN 194 (870)
Q Consensus 118 l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L--~~L~L~~n 194 (870)
|++|+|+ .+|.. .+++|++|+|++|++++. .|..+.++++|++|++++|++++.... .+++| +.|++++|
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~----~l~~L~L~~L~L~~n 179 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLL----PVAHLHLSCILLDLV 179 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTG----GGTTSCEEEEEEEES
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchh----hhhhceeeEEEeecc
Confidence 9999999 56665 899999999999999873 468999999999999999999863322 24455 99999999
Q ss_pred cc--ccccCCcccCCC-CccEEEccCCcccCCCcc-ccccccccccccccccccc--cccCCCCCcccccccccccccce
Q 002892 195 RL--TGTIPNSITNAS-KLIGLDLNSNSLSGQIPN-TFGNLRHLSTLNIRANYLT--TETSSNGEWSFLSSLTNCNKLRA 268 (870)
Q Consensus 195 ~l--~~~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~~~l~~l~~L~~ 268 (870)
++ ++..|..+..+. ....+++++|.+.+..++ .+..+++|+.|++++|... .+. .....+..+++|+.
T Consensus 180 ~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~------~~~~~l~~l~~L~~ 253 (562)
T 3a79_B 180 SYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM------TFLSELTRGPTLLN 253 (562)
T ss_dssp SCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHH------HHHHHHHSCSSCEE
T ss_pred cccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHH------HHHHHHhccCcceE
Confidence 99 888888888765 233679999998875554 4778999999999998521 111 12345778889999
Q ss_pred EEcCCCCCCCCCCccccc--cccchhhhhcccccccccCchhh-----hCccCCcEEEeeCCCccccCC-chhhch---h
Q 002892 269 LSLGSNPLDSILPPLIGN--FSASFQQFYAHECKLKGSIPKEI-----GNLRGLIALSLFTNDLNGTIP-TTLGRL---Q 337 (870)
Q Consensus 269 L~L~~N~l~~~~~~~~~~--~~~~l~~l~l~~n~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~ 337 (870)
|+++++.+.+.....+.. ....++.|++++|.+++.+|..+ ..++.|..++++.|.+ .+| ..+..+ .
T Consensus 254 L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~ 331 (562)
T 3a79_B 254 VTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEM 331 (562)
T ss_dssp EEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTC
T ss_pred EEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccC
Confidence 999888765421111000 11378999999999999999888 7888888888888888 345 333333 4
Q ss_pred hHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCC--CcccccCCccCCEEEc
Q 002892 338 QLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGS--LPSDIQNLKVLIYLNL 415 (870)
Q Consensus 338 ~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L 415 (870)
+|+.|+++++-....+ ....+++|++|+|++|++++..|..|..+++|+.|+|++|++++. +|..|.++++|++|+|
T Consensus 332 ~L~~L~l~~n~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l 410 (562)
T 3a79_B 332 NIKMLSISDTPFIHMV-CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDV 410 (562)
T ss_dssp CCSEEEEESSCCCCCC-CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEEC
T ss_pred cceEEEccCCCccccc-CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEEC
Confidence 5777778854433222 126789999999999999999999999999999999999999963 3567999999999999
Q ss_pred cCCccCCccc-ccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccc
Q 002892 416 SRNQLSGNIP-ITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 416 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
++|++++.+| ..+..+++|+.|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++
T Consensus 411 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 411 SLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp TTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 9999998444 5689999999999999999987777655 79999999999999 788877799999999999999995
Q ss_pred cCCCC--CcccccccccccccccccC
Q 002892 495 KIPTN--GPFRNFLAQSFLWNYALCG 518 (870)
Q Consensus 495 ~~p~~--~~~~~~~~~~~~~n~~~c~ 518 (870)
+|.. ..+.......+.+|++.|+
T Consensus 488 -l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 488 -VPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp -CCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred -CCHHHHhcCCCCCEEEecCCCcCCC
Confidence 5542 3344444455678877775
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.3e-44 Score=384.15 Aligned_cols=268 Identities=18% Similarity=0.241 Sum_probs=200.9
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCe
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 655 (870)
....+.|++.+.||+|+||+||+|+.+ +++.||+|++..... ..++.+|+++++.+ .||||+++++++.+.++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345688999999999999999999853 467899999865432 35678899999998 69999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC-CceEEeccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN-MTARVSDFGISKL 734 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~~ 734 (870)
.|+||||+++|+|.+++. .+++.++..++.|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999984 3899999999999999999999 6679999999999999877 8999999999976
Q ss_pred cCCCCCc--------------------------ccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCC
Q 002892 735 LGEDDDS--------------------------VTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPT 787 (870)
Q Consensus 735 ~~~~~~~--------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~ 787 (870)
....... ...+..+||+.|+|||++.+. .++.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 5432111 112335799999999999775 4899999999999999999999999
Q ss_pred CccccccchHHHHHHHhc---------------------CC-chhhhcchh---------hhccc----CcchHHHHHHH
Q 002892 788 DEMFTGEMSLKHWIKLSL---------------------PR-GLTEVVDAS---------LVREV----QPSYAKMDCLL 832 (870)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~~---------~~~~~----~~~~~~~~~~~ 832 (870)
....+....+..+....- +. ......... ..... .........+.
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~ 327 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD 327 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence 654333333333221100 00 000000000 00000 00000012345
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 833 RIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 833 ~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
++.+++.+|++.||++|||+.|+++
T Consensus 328 ~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 328 EAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHCcCChhHCcCHHHHhc
Confidence 6889999999999999999999875
No 42
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-44 Score=388.55 Aligned_cols=268 Identities=22% Similarity=0.273 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee------CC
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN------LD 654 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 654 (870)
.++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999965 79999999996543 3445678899999999999999999998754 35
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..|+||||++ |+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999995 68999997654 4999999999999999999999 66799999999999999999999999999987
Q ss_pred cCCCC--CcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc-CCc-h
Q 002892 735 LGEDD--DSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL-PRG-L 809 (870)
Q Consensus 735 ~~~~~--~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~-~ 809 (870)
+.... ........+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+... ...+..+..... +.. .
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-~~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-VHQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-HHHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhcCCCChHH
Confidence 64322 12233456899999999998775 569999999999999999999999976321 222222222211 110 0
Q ss_pred hhhcc-----h---hhhcccCcchH--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 TEVVD-----A---SLVREVQPSYA--KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ~~~~~-----~---~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..... . .+.......+. .......+.+++.+||..||++|||+.|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 0 00000000000 0112456889999999999999999999876
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5e-42 Score=388.63 Aligned_cols=373 Identities=21% Similarity=0.284 Sum_probs=308.4
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccC-CccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSF-PSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
++|++|||++|++++..|..|.++++|++|++++|.+.+.+ +..|+.+++|++|+|++|++++..|..++++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999997544 67899999999999999999988899999999999999
Q ss_pred ccCCccccccCcC--CCCcCCccEEEeecCccceecCCc-ccCCCCCCeeeccccccccccccccccc--ccceEEEeec
Q 002892 94 SRFNSISGNIPSK--IGNLTKLVHLNFADNNLRGEIPNE-IGNLKNLADLVLALNNLIGPIPTTIFNI--STIIIINLVG 168 (870)
Q Consensus 94 L~~n~i~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~~-l~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~ 168 (870)
|++|++++..|.. |+.+++|++|+|++|++++..|.. +.++++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998755544 999999999999999999877776 8999999999999999998888888876 6888888888
Q ss_pred ccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccc---cccccccccccccc
Q 002892 169 NQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNL---RHLSTLNIRANYLT 245 (870)
Q Consensus 169 N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l---~~L~~L~L~~N~l~ 245 (870)
|.+.+..+..+.. .....+..+++|++|++++|++++..|..+... ++|+.|++++|.+.
T Consensus 190 n~l~~~~~~~~~~-----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 252 (455)
T 3v47_A 190 ITLQDMNEYWLGW-----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM 252 (455)
T ss_dssp CBCTTCSTTCTTH-----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTT
T ss_pred Ccccccchhhccc-----------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccc
Confidence 8887554433221 122334556788888888888887777766554 56666666666544
Q ss_pred cccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhC--ccCCcEEEeeCC
Q 002892 246 TETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGN--LRGLIALSLFTN 323 (870)
Q Consensus 246 ~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~--l~~L~~L~L~~N 323 (870)
... +..+.+. ...+..+.. .++|+.|++++|
T Consensus 253 ~~~----------------------~~~~~~~-------------------------~~~~~~~~~~~~~~L~~L~l~~n 285 (455)
T 3v47_A 253 GSS----------------------FGHTNFK-------------------------DPDNFTFKGLEASGVKTCDLSKS 285 (455)
T ss_dssp SCC----------------------TTCCSSC-------------------------CCCTTTTGGGTTSCCCEEECCSS
T ss_pred ccc----------------------cchhhhc-------------------------cCcccccccccccCceEEEecCc
Confidence 311 0111111 111122222 367899999999
Q ss_pred CccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCccc
Q 002892 324 DLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSD 403 (870)
Q Consensus 324 ~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 403 (870)
.+.+..|. .+..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++..|..
T Consensus 286 ~l~~~~~~-----------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 342 (455)
T 3v47_A 286 KIFALLKS-----------------------VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRM 342 (455)
T ss_dssp CCCEECTT-----------------------TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGG
T ss_pred cccccchh-----------------------hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhH
Confidence 98865543 4566788999999999999999999999999999999999999888999
Q ss_pred ccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCc
Q 002892 404 IQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPK 474 (870)
Q Consensus 404 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 474 (870)
|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|++++..|.
T Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 343 FENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp GTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred hcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999999999999999998899999999999999999999988888899999999999999999987763
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.9e-42 Score=391.59 Aligned_cols=248 Identities=21% Similarity=0.290 Sum_probs=198.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHH---HHHHHHHHHHHHhcCCCceeEEeeeeeeCCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERA---FRSFESECEVLRNVRHRNLIKIFSSCCNLDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 656 (870)
.++|++.++||+|+||+||+|+.. +|+.||+|++++.. ... ....+.++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999965 69999999997643 111 22233446677778999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
|+||||++||+|.+++...+. +++..+..++.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 999999999999999987654 899999999999999999999 7779999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccc-hHHHHHHHhcCCchhhhcc
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM-SLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 814 (870)
... ....+||+.|||||++.. ..|+.++|+||+||++|||++|..||.+...... .+...+.. .+...
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~-~~~~~----- 413 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-MAVEL----- 413 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH-CCCCC-----
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC-CCCCC-----
Confidence 322 234579999999999964 5799999999999999999999999976322211 11111100 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMC-----MTDVVV 857 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~ 857 (870)
+...+.++.+++.+|++.||++|++ +.||++
T Consensus 414 ------------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 414 ------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ------------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ------------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 0112346889999999999999998 677654
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-42 Score=397.87 Aligned_cols=252 Identities=22% Similarity=0.268 Sum_probs=209.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++........+.+.+|+++++.++|||||++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999965 7999999999876666667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC--CceEEeccccccccCCCCC
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN--MTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 740 (870)
++||+|.+++......+++.++..++.||+.||+||| +++|+||||||+||+++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999866666999999999999999999999 6669999999999999854 899999999999774332
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
......||+.|||||++.+..|+.++||||+||++|||++|..||.+.... ..+..+.......
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~~~------------- 375 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDWNM------------- 375 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCC-------------
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCCCC-------------
Confidence 233457999999999999999999999999999999999999999763221 1111111111100
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||+.||++||++.|+++
T Consensus 376 --~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 376 --DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00011123456889999999999999999999986
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.8e-42 Score=384.80 Aligned_cols=396 Identities=24% Similarity=0.298 Sum_probs=243.3
Q ss_pred CCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCC-------------CEEEcCCC
Q 002892 7 VPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKL-------------QVLSLRNN 73 (870)
Q Consensus 7 ~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-------------~~L~L~~n 73 (870)
|.|+-.+.++|++|++++|++ +.+|++++++++|++|++++|.+++.+|..++.+.+| ++|++++|
T Consensus 3 ~~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~ 81 (454)
T 1jl5_A 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNL 81 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTS
T ss_pred ccccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCC
Confidence 345555679999999999999 5899999999999999999999999999999998875 99999999
Q ss_pred ccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccc
Q 002892 74 SFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPT 153 (870)
Q Consensus 74 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 153 (870)
.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +|
T Consensus 82 ~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp- 147 (454)
T 1jl5_A 82 GLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP- 147 (454)
T ss_dssp CCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-
T ss_pred cccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-
Confidence 9984 5552 3789999999999995 6754 3789999999999994 4432 1689999999999986 66
Q ss_pred cccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccc
Q 002892 154 TIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRH 233 (870)
Q Consensus 154 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 233 (870)
.+.++++|++|++++|++++ +|.. .++|++|++++|++++ +| .+.++++|++|++++|++++ +|... ++
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~ 216 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LS 216 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TT
T ss_pred ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Cc
Confidence 59999999999999999986 3433 4589999999999996 56 68999999999999999985 44432 58
Q ss_pred cccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCcc
Q 002892 234 LSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLR 313 (870)
Q Consensus 234 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~ 313 (870)
|++|++++|.++.++ .+..+++|++|++++|++.++. + ...+++.|++++|.+++ +|.. ++
T Consensus 217 L~~L~l~~n~l~~lp----------~~~~l~~L~~L~l~~N~l~~l~-~----~~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 217 LESIVAGNNILEELP----------ELQNLPFLTTIYADNNLLKTLP-D----LPPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp CCEEECCSSCCSSCC----------CCTTCTTCCEEECCSSCCSSCC-S----CCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred ccEEECcCCcCCccc----------ccCCCCCCCEEECCCCcCCccc-c----cccccCEEECCCCcccc-cCcc---cC
Confidence 999999999988543 3678899999999999998743 2 12455566666666554 3322 24
Q ss_pred CCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccc-cccceEecC
Q 002892 314 GLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSL-EYILRIDLS 392 (870)
Q Consensus 314 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls 392 (870)
+|+.|++++|++++. |. + .++|++|++++|++++. + .+ ++|+.|+++
T Consensus 278 ~L~~L~ls~N~l~~l-~~--------------------~------~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls 325 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SE--------------------L------PPNLYYLNASSNEIRSL-C----DLPPSLEELNVS 325 (454)
T ss_dssp TCCEEECCSSCCSEE-SC--------------------C------CTTCCEEECCSSCCSEE-C----CCCTTCCEEECC
T ss_pred cCCEEECcCCccCcc-cC--------------------c------CCcCCEEECcCCcCCcc-c----CCcCcCCEEECC
Confidence 556666666655531 10 0 13566677777776642 1 22 366677777
Q ss_pred CCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccC--cccccccCCCCCCeEecCCCcccC
Q 002892 393 SNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQD--SIPDSFGSLTSLEYLDLSNNNLSG 470 (870)
Q Consensus 393 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~ 470 (870)
+|++++ +|.. +++|++|++++|++++ +|. .+++|+.|++++|++++ .+|.++..+ +.|++.+
T Consensus 326 ~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~ 389 (454)
T 1jl5_A 326 NNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLA 389 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC---
T ss_pred CCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccc
Confidence 777664 4443 3566777777777763 443 35667777777777766 455544432 2344444
Q ss_pred CCCcchhhccccceeeccCCcccc--cCCC
Q 002892 471 EIPKSFEILSHLKRLNVSHNRLEG--KIPT 498 (870)
Q Consensus 471 ~~p~~~~~l~~L~~L~ls~N~l~~--~~p~ 498 (870)
.+|.. +++|+.|++++|++++ .+|.
T Consensus 390 ~i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 390 EVPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp ------------------------------
T ss_pred ccccc---cCcCCEEECCCCcCCccccchh
Confidence 44442 3677788888888876 5664
No 47
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.1e-42 Score=372.00 Aligned_cols=283 Identities=34% Similarity=0.559 Sum_probs=231.9
Q ss_pred cchhHHHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC
Q 002892 575 TSYLDIQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD 654 (870)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 654 (870)
+.+.++...+++|+..+.||+|+||.||+|++.+++.||+|++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34556677889999999999999999999998889999999987766666778999999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHN---YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGI 731 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 731 (870)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999997543 35899999999999999999999 56799999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc-chHHHHHHHhc-CCch
Q 002892 732 SKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE-MSLKHWIKLSL-PRGL 809 (870)
Q Consensus 732 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~-~~~~ 809 (870)
+................||+.|+|||++.++.++.++||||||+++|||++|+.||......+ .....|..... ....
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 987644333333344568999999999988899999999999999999999999997643322 22333332221 1223
Q ss_pred hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 810 TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
...+++..... ...+++..+.+++.+||+.||++||++.||++.|+.+.+.
T Consensus 266 ~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 266 EQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CSSSSSSCTTC-----SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHhcChhhccc-----cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 33333322211 1235677899999999999999999999999999988763
No 48
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.1e-42 Score=369.51 Aligned_cols=276 Identities=21% Similarity=0.279 Sum_probs=215.3
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC----eeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD----FKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~l 658 (870)
..++|++.+.||+|+||.||+|+.. ++.||||++...... ....+.|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3468999999999999999999865 799999999765433 345567999999999999999999998744 4699
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CcEecccCCCceeeCCCCceEEec
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHST----------PVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~----------~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
||||+++|+|.+++.... +++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 999999999999998654 899999999999999999999 55 899999999999999999999999
Q ss_pred cccccccCCCCCcccccccccccccCCcccccC-----CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 002892 729 FGISKLLGEDDDSVTQTMTMATIGYMAPEYASD-----GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL 803 (870)
Q Consensus 729 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 803 (870)
||++................||+.|+|||++.+ ..++.++|||||||++|||++|+.||...............
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~- 253 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI- 253 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH-
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh-
Confidence 999987755444334444679999999999976 35667899999999999999999999764332211111000
Q ss_pred hcCCchhhhcc----hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 804 SLPRGLTEVVD----ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 804 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.......++.+ ..........+....++..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00111111111 1111111222233456778999999999999999999999999999998764
No 49
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=364.39 Aligned_cols=263 Identities=22% Similarity=0.391 Sum_probs=216.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 467888999999999999999965 6899999998776667778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999987677999999999999999999999 6669999999999999999999999999998764332211
Q ss_pred c------------ccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 002892 743 T------------QTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLT 810 (870)
Q Consensus 743 ~------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 810 (870)
. .....||+.|+|||++.+..++.++||||||+++|||++|..||............ ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------~~~ 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--------NVR 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------CHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------hhh
Confidence 1 11456899999999999999999999999999999999999998653222111000 000
Q ss_pred hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 811 EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...+... +..++..+.+++.+||+.||++||++.++++.|+++++..
T Consensus 238 ~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 238 GFLDRYC---------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHHHTC---------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccccC---------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111100 1123446889999999999999999999999999998765
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-41 Score=365.92 Aligned_cols=284 Identities=36% Similarity=0.536 Sum_probs=231.0
Q ss_pred ccccchhHHHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhh-HHHHHHHHHHHHHHhcCCCceeEEeeee
Q 002892 572 WRRTSYLDIQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLE-RAFRSFESECEVLRNVRHRNLIKIFSSC 650 (870)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~ 650 (870)
.+.+++.++....++|++.+.||+|+||.||+|+..+++.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 455788899999999999999999999999999988899999999876532 2223688999999999999999999999
Q ss_pred eeCCeeEEEEecCCCCCHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEe
Q 002892 651 CNLDFKALVLEFMPNGSLEKWLYSHN---YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVS 727 (870)
Q Consensus 651 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 727 (870)
...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+..||+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998543 348999999999999999999996533489999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcc---ccccchHHHHHHHh
Q 002892 728 DFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEM---FTGEMSLKHWIKLS 804 (870)
Q Consensus 728 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~---~~~~~~~~~~~~~~ 804 (870)
|||++........ .......||+.|+|||++.+..++.++||||+|+++|||++|+.||+.. .........|....
T Consensus 177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 9999987643322 2233456899999999998889999999999999999999999999642 12233344555443
Q ss_pred cCCc-hhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002892 805 LPRG-LTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQK 861 (870)
Q Consensus 805 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~ 861 (870)
.... .....+...... ...+++..+.+++..||+.+|++|||++||++.|++
T Consensus 256 ~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGN-----YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TSSCCSTTSSCTTCTTS-----CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhchhhhhhcChhhccc-----cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 3332 333444333222 123567789999999999999999999999999975
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.3e-41 Score=356.94 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=208.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 456899999999999999999985 4789999999987665566778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++|+|.+++.... +++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CCTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 999999999998653 899999999999999999999 66799999999999999999999999999987643322
Q ss_pred ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhccc
Q 002892 742 VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREV 821 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (870)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........+.
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~-------------- 235 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPE-------------- 235 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCC--------------
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC--------------
Confidence 2334579999999999999999999999999999999999999997532111 111111111110
Q ss_pred CcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 822 QPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 822 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...+..++..+.+++.+||+.||++||++.|+++
T Consensus 236 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 --LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0001123456889999999999999999999976
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.5e-41 Score=369.81 Aligned_cols=262 Identities=23% Similarity=0.409 Sum_probs=215.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec--------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeee
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCN 652 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 652 (870)
..++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 3478899999999999999999852 35679999997653 34567799999999999 89999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCcee
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSHN---------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNIL 717 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 717 (870)
.+..|+||||+++|+|.+++...+ ..+++.+++.++.||+.||+||| +++|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEE
Confidence 999999999999999999998643 34799999999999999999999 667999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccch
Q 002892 718 LDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMS 796 (870)
Q Consensus 718 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~ 796 (870)
++.++.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999987754443333444567889999999999999999999999999999999 99998763221 1
Q ss_pred HHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 797 LKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
+...+..... ...+..++..+.+++.+||+.+|++||++.|+++.|+++....
T Consensus 314 ~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 314 LFKLLKEGHR-----------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHHHTTCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111111100 0011134557899999999999999999999999999987643
No 53
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.2e-42 Score=377.54 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=215.3
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|++. +++.||||+++... ......+.+|++++++++||||+++++++...+..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 4567888999999999999999976 78999999987543 334457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999977667999999999999999999999 66699999999999999999999999999986533222
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
........+++.|+|||++.++.++.++|||||||++|||++ |..||...... .....+.....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~------------- 333 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGGR------------- 333 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTCC-------------
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-------------
Confidence 222222345778999999998899999999999999999998 99998763221 11111111000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...+..++..+.+++.+||+.+|++|||+.+|++.|+++++.+
T Consensus 334 ----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 334 ----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0011124567899999999999999999999999999998875
No 54
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-41 Score=360.72 Aligned_cols=276 Identities=25% Similarity=0.394 Sum_probs=212.1
Q ss_pred hcCCCCCCeeccccceeEEEEEe-----cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee--CCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-----FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN--LDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 656 (870)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46789999999999999999984 3688999999987777777889999999999999999999999854 3568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++|+|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999977767999999999999999999999 6679999999999999999999999999998764
Q ss_pred CCCCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch-hhhcc
Q 002892 737 EDDDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGL-TEVVD 814 (870)
Q Consensus 737 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 814 (870)
..... .......++..|+|||++.+..++.++||||||+++|||++|..|+...... ............. .....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 43222 2223345778899999999999999999999999999999999998652111 0000000000000 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+... .....+..++..+.+++.+||+.+|++|||+.|+++.|+++++.+
T Consensus 243 ~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 243 ELLKNN-GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHTT-CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHhcc-CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111111 011112245678999999999999999999999999999998764
No 55
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.4e-41 Score=359.51 Aligned_cols=264 Identities=27% Similarity=0.424 Sum_probs=205.5
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
+....++|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 344567899999999999999999986 58899999986543 344567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeCCCCceEEecccccc
Q 002892 658 LVLEFMPNGSLEKWLYSHN--YFLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+||||+++|+|.+++...+ ..+++..++.++.|++.||+||| +++ |+||||||+||+++.++.+||+|||++.
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999998543 23899999999999999999999 777 9999999999999999999999999997
Q ss_pred ccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhc
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVV 813 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (870)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+......
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~------ 257 (309)
T 3p86_A 188 LKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKCKR------ 257 (309)
T ss_dssp ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSCCC------
T ss_pred cccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCCC------
Confidence 653221 22334568999999999999999999999999999999999999997632211 11111100000
Q ss_pred chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 814 DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
...+..++..+.+++.+||+.+|++||++.++++.|+++.+...
T Consensus 258 ----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 258 ----------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred ----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 00011234568899999999999999999999999999987643
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.6e-40 Score=350.47 Aligned_cols=281 Identities=29% Similarity=0.460 Sum_probs=227.1
Q ss_pred ccccchhHHHHhhcCCCCC------CeeccccceeEEEEEecCCcEEEEEEeechh----hHHHHHHHHHHHHHHhcCCC
Q 002892 572 WRRTSYLDIQQATDGFNEC------NLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL----ERAFRSFESECEVLRNVRHR 641 (870)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~ 641 (870)
...+++.++..+++.|... +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4567888899998888776 8999999999999985 58899999986532 34467899999999999999
Q ss_pred ceeEEeeeeeeCCeeEEEEecCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC
Q 002892 642 NLIKIFSSCCNLDFKALVLEFMPNGSLEKWLYSH--NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD 719 (870)
Q Consensus 642 niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 719 (870)
||+++++++...+..++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999999743 345899999999999999999999 66799999999999999
Q ss_pred CCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHH
Q 002892 720 KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKH 799 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 799 (870)
+++.+||+|||++................||+.|+|||++.+ .++.++||||||+++|+|++|..||........ ...
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~ 245 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLD 245 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHH
Confidence 999999999999987654433333444578999999998865 588999999999999999999999986433322 222
Q ss_pred HHHH--hcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 800 WIKL--SLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 800 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
+... .....+.+.++..+. .....++..+.+++.+||+.+|++||++.+|++.|+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCS------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhcccccc------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2221 112223333333221 1123457789999999999999999999999999999865
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=361.61 Aligned_cols=261 Identities=28% Similarity=0.443 Sum_probs=211.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeech-hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQ-LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.+.||+|+||.||+|.+. .+..||||+++.. .....+.+.+|++++++++||||+++++++...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467889999999999999999964 3456999999765 34455779999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877667999999999999999999999 666999999999999999999999999999877543
Q ss_pred CCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 739 DDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 739 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .....+.....
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~---------- 272 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGYR---------- 272 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTCC----------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCC----------
Confidence 222 22233456788999999998999999999999999999999 99999753221 11111110000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...+..++..+.+++..||+.+|++||++.+|++.|+++.+..
T Consensus 273 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 273 -------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred -------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 0011134557899999999999999999999999999987653
No 58
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.9e-41 Score=377.39 Aligned_cols=373 Identities=22% Similarity=0.232 Sum_probs=183.3
Q ss_pred CccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCC-------------cEEeccCCc
Q 002892 32 PNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSL-------------VRLDSRFNS 98 (870)
Q Consensus 32 p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~ 98 (870)
|+.+ ..++|++|++++|.+ +.+|..++.+++|++|++++|.+++.+|.+++++++| ++|++++|.
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred cccc-ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 4444 468899999999999 5899999999999999999999998999999998876 666666666
Q ss_pred cccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCc
Q 002892 99 ISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPST 178 (870)
Q Consensus 99 i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 178 (870)
++ .+|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. +.. .++|++|++++|++++ +| .
T Consensus 83 l~-~lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 83 LS-SLPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp CS-CCCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred cc-cCCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 65 33331 2456666666666663 4432 24556666666655531 111 1355555555555554 33 1
Q ss_pred ccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccccc
Q 002892 179 MGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLS 258 (870)
Q Consensus 179 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 258 (870)
...+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .|+++++|++|++++|.++.++..
T Consensus 149 -~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~-------- 213 (454)
T 1jl5_A 149 -LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL-------- 213 (454)
T ss_dssp -CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC--------
T ss_pred -cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC--------
Confidence 2335555555555555553 33322 355555555555553 23 355555555555555555443210
Q ss_pred ccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhh
Q 002892 259 SLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQ 338 (870)
Q Consensus 259 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 338 (870)
.++|++|++++|++. .+| .+..+++|+.|++++|++.+ +|.. +++
T Consensus 214 ----~~~L~~L~l~~n~l~--------------------------~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~ 258 (454)
T 1jl5_A 214 ----PLSLESIVAGNNILE--------------------------ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPS 258 (454)
T ss_dssp ----CTTCCEEECCSSCCS--------------------------SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTT
T ss_pred ----cCcccEEECcCCcCC--------------------------ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccc
Confidence 124555555555444 334 36667777777777777764 3332 133
Q ss_pred HHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCC-ccCCEEEccC
Q 002892 339 LQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNL-KVLIYLNLSR 417 (870)
Q Consensus 339 L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~ 417 (870)
|+.|++++|....+|.. .++|++|++++|++++. |.. .++|+.|++++|++++ ++ .+ ++|++|++++
T Consensus 259 L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 259 LEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSN 326 (454)
T ss_dssp CCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCS
T ss_pred cCEEECCCCcccccCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCC
Confidence 44444443322233332 24566666666666642 111 1456666666666663 22 22 3666666666
Q ss_pred CccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccC--CCCcchhhccccceeeccCCccccc
Q 002892 418 NQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSG--EIPKSFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 418 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~ 495 (870)
|++++ +|.. +++|+.|++++|++++ +|. .+++|+.|+|++|++++ .+|..+.. ++.|.+.|.
T Consensus 327 N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~ 390 (454)
T 1jl5_A 327 NKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAE 390 (454)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC----
T ss_pred Ccccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccc
Confidence 66664 3332 3566666666666663 444 35666666666666665 44544332 234555565
Q ss_pred CCC
Q 002892 496 IPT 498 (870)
Q Consensus 496 ~p~ 498 (870)
+|.
T Consensus 391 i~~ 393 (454)
T 1jl5_A 391 VPE 393 (454)
T ss_dssp ---
T ss_pred ccc
Confidence 554
No 59
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.5e-41 Score=352.06 Aligned_cols=258 Identities=26% Similarity=0.420 Sum_probs=213.2
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecC
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFM 663 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 663 (870)
.++|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 467889999999999999999988899999999976542 2367899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCccc
Q 002892 664 PNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVT 743 (870)
Q Consensus 664 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 743 (870)
++++|.+++......+++..++.++.|++.|++||| +++|+||||||+||+++.++.+||+|||++....... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 999999999877777999999999999999999999 6669999999999999999999999999998664321 122
Q ss_pred ccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccC
Q 002892 744 QTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQ 822 (870)
Q Consensus 744 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (870)
.....+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .....+......
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~--------------- 226 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL--------------- 226 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC---------------
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccC---------------
Confidence 233456788999999998999999999999999999999 99998753221 111111110000
Q ss_pred cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 823 PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 823 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 227 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 --YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00011244688999999999999999999999999998864
No 60
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.4e-41 Score=351.29 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=213.7
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
..++|++.+.||+|+||.||+|+..++..||+|+++.... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 4568999999999999999999988888999999976543 236688999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
+++++|.+++...+..+++..++.++.|++.|++||| ++||+||||||+||+++.++.+||+|||.+........ .
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~ 160 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-V 160 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-E
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-h
Confidence 9999999999877667999999999999999999999 66799999999999999999999999999987644332 2
Q ss_pred cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhccc
Q 002892 743 TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREV 821 (870)
Q Consensus 743 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (870)
......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ .........
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--~~~~~~~~~--------------- 223 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--VLKVSQGHR--------------- 223 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHHTTCC---------------
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--HHHHHcCCC---------------
Confidence 2334456788999999998899999999999999999999 9999875322111 110000000
Q ss_pred CcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 822 QPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 822 ~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
...+..++..+.+++..||+.+|++|||+.++++.|+++++.
T Consensus 224 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 224 --LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 000111234688999999999999999999999999998765
No 61
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.8e-40 Score=367.18 Aligned_cols=362 Identities=21% Similarity=0.227 Sum_probs=234.9
Q ss_pred ccCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCC
Q 002892 5 GTVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLF 84 (870)
Q Consensus 5 ~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 84 (870)
+..+..++++++|++|++++|++++ +| .+..+++|++|++++|++++ +| ++.+++|++|+|++|+|++ ++ ++
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~ 103 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VT 103 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CT
T ss_pred cccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cC
Confidence 4444556677777777777777775 34 57777777777777777774 33 6777777777777777774 33 77
Q ss_pred CCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEE
Q 002892 85 NLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIII 164 (870)
Q Consensus 85 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 164 (870)
++++|++|++++|++++ +| ++.+++|++|++++|++++ ++ ++.+++|++|++++|+..+.+ .+..+++|++|
T Consensus 104 ~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L 175 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTL 175 (457)
T ss_dssp TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEE
Confidence 77777777777777774 33 6777777777777777774 32 667777777777777544444 35566666666
Q ss_pred EeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccc
Q 002892 165 NLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYL 244 (870)
Q Consensus 165 ~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l 244 (870)
++++|++++. | ...+++|+.|++++|++++. .+..+++|++|++++|++++ +| ++.+++|+.|++++|.+
T Consensus 176 ~ls~n~l~~l-~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 176 DCSFNKITEL-D---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp ECCSSCCCCC-C---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCC
T ss_pred ECCCCcccee-c---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcC
Confidence 6666666653 2 22345555555555555543 25555555555555555554 23 45555555555555555
Q ss_pred ccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCC
Q 002892 245 TTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTND 324 (870)
Q Consensus 245 ~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~ 324 (870)
+.++ +..+++|+.|++++|++ +.|++++|.
T Consensus 246 ~~~~-----------~~~l~~L~~L~l~~n~L---------------------------------------~~L~l~~n~ 275 (457)
T 3bz5_A 246 TELD-----------VSTLSKLTTLHCIQTDL---------------------------------------LEIDLTHNT 275 (457)
T ss_dssp SCCC-----------CTTCTTCCEEECTTCCC---------------------------------------SCCCCTTCT
T ss_pred CCcC-----------HHHCCCCCEEeccCCCC---------------------------------------CEEECCCCc
Confidence 4422 22334444444444322 222333333
Q ss_pred ccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccc
Q 002892 325 LNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDI 404 (870)
Q Consensus 325 l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 404 (870)
+ .+.+| ++.+++|+.|+|++|...+.+|. ...+|+.|++++|
T Consensus 276 ~-----------------------~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~---------- 317 (457)
T 3bz5_A 276 Q-----------------------LIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN---------- 317 (457)
T ss_dssp T-----------------------CCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC----------
T ss_pred c-----------------------CCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc----------
Confidence 2 23333 34567788888888877666653 3345555555544
Q ss_pred cCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccce
Q 002892 405 QNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKR 484 (870)
Q Consensus 405 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 484 (870)
++|++|+|++|+|++. .++++++|+.|++++|++++ ++.|+.|++++|+++|. ..+..|..
T Consensus 318 ---~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~ 378 (457)
T 3bz5_A 318 ---PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPK 378 (457)
T ss_dssp ---TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCC
T ss_pred ---ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCc
Confidence 6789999999999874 38889999999999999886 35677888999999875 35678888
Q ss_pred eeccCCcccccCCCC
Q 002892 485 LNVSHNRLEGKIPTN 499 (870)
Q Consensus 485 L~ls~N~l~~~~p~~ 499 (870)
+++++|+++|.+|..
T Consensus 379 l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 379 ETLTNNSLTIAVSPD 393 (457)
T ss_dssp BCCBTTBEEEECCTT
T ss_pred cccccCcEEEEcChh
Confidence 999999999999863
No 62
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4e-40 Score=353.46 Aligned_cols=260 Identities=21% Similarity=0.301 Sum_probs=210.5
Q ss_pred ccchhHHHHhhcC----------CCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc
Q 002892 574 RTSYLDIQQATDG----------FNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN 642 (870)
Q Consensus 574 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n 642 (870)
.+++.+++.+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 3455565555543 666779999999999999976 79999999998766666678899999999999999
Q ss_pred eeEEeeeeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC
Q 002892 643 LIKIFSSCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM 722 (870)
Q Consensus 643 iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~ 722 (870)
|+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999998754 4899999999999999999999 56799999999999999999
Q ss_pred ceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHH
Q 002892 723 TARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIK 802 (870)
Q Consensus 723 ~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 802 (870)
.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.
T Consensus 179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~ 254 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLR 254 (321)
T ss_dssp CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHH
T ss_pred cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHh
Confidence 999999999987643322 22345699999999999999999999999999999999999999975311 11111111
Q ss_pred HhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 803 LSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...+.... ....++..+.+++.+||+.||++||++.|+++
T Consensus 255 ~~~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 255 DSPPPKLK---------------NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp HSSCCCCT---------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCCcC---------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111000 01122446889999999999999999999986
No 63
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.5e-40 Score=352.65 Aligned_cols=263 Identities=25% Similarity=0.454 Sum_probs=207.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeech--hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQ--LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 3468999999999999999999854 46899988653 2445678899999999999999999999875 45689999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++........
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877777999999999999999999999 56699999999999999999999999999986644333
Q ss_pred cccccccccccccCCccccc---CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCchhhhcchh
Q 002892 741 SVTQTMTMATIGYMAPEYAS---DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPRGLTEVVDAS 816 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 816 (870)
........||+.|+|||++. +..++.++||||||+++|||++|+.||......+. ........ .+......
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~---- 262 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPDLSKL---- 262 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCCCCCSTTS----
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCCCcchhhh----
Confidence 33444557999999999986 66788999999999999999999999976432221 11111111 11111110
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...++..+.+++.+||+.+|++||++.+|++.++.+.+.+
T Consensus 263 ----------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 263 ----------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ----------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ----------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0123457899999999999999999999999999988764
No 64
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.9e-40 Score=353.57 Aligned_cols=250 Identities=22% Similarity=0.335 Sum_probs=206.0
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
....++|++.+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..|
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 33457899999999999999999996 579999999997653 345577889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++...+. +++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999999986544 899999999999999999999 66799999999999999999999999999986643
Q ss_pred CCCcccccccccccccCCcccccCCCcC-cccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIIS-PKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.. ......||+.|+|||++.+..++ .++||||+||++|||++|+.||+..... .....+..
T Consensus 167 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~------------- 228 (328)
T 3fe3_A 167 GG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVLR------------- 228 (328)
T ss_dssp SC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH-------------
T ss_pred CC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-------------
Confidence 22 33445799999999999887765 7999999999999999999999763211 11111100
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..... +..++..+.+++.+||+.||++|||+.|+++
T Consensus 229 --~~~~~---p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 229 --GKYRI---PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp --CCCCC---CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred --CCCCC---CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000 0012346889999999999999999999975
No 65
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1e-40 Score=365.21 Aligned_cols=261 Identities=26% Similarity=0.451 Sum_probs=202.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 467999999999999999999864 57789999997653 3455779999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++...+..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999987777999999999999999999999 566999999999999999999999999999876433
Q ss_pred CCcc-cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 739 DDSV-TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 739 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+. ..
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~------------~~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVD------------EG 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHH------------TT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH------------cC
Confidence 2211 1222345778999999999999999999999999999998 99998753211 1111111 00
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.. ...+..++..+.+++.+||+.+|++||++.+|++.|+++.+..
T Consensus 267 ~~-----~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 YR-----LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp EE-----CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred CC-----CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00 0011134567899999999999999999999999999987653
No 66
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-40 Score=351.50 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=208.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 4578999999999999999999965 68899999987553 334668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC--CCceEEeccccccccCCCC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK--NMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~ 739 (870)
|+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999877667999999999999999999999 667999999999999987 7899999999998764332
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+.......
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~------------ 222 (321)
T 1tki_A 159 ---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTF------------ 222 (321)
T ss_dssp ---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCC------------
T ss_pred ---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHcCCCCC------------
Confidence 233456899999999999988999999999999999999999999763211 1111111111100
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||..||++|||+.|+++
T Consensus 223 ---~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 ---DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ---CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111123557899999999999999999999987
No 67
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=357.02 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=197.7
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
....++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 34568899999999999999999996 479999999987653 2334568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++...+. +++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||++......
T Consensus 86 v~E~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp EEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred EEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 9999999999999976543 899999999999999999999 667999999999999999999999999999865432
Q ss_pred CCcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.. .......||+.|+|||++.+..+ +.++||||+||++|+|++|..||+..... ...........+ .
T Consensus 162 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~-------- 229 (347)
T 3zgw_A 162 KD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMRGKYD--V-------- 229 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--C--------
T ss_pred CC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCC--C--------
Confidence 22 22334568999999999988775 88999999999999999999999752111 111111110000 0
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+ ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 230 -----p----~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 -----P----KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----C----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----C----CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 0123457889999999999999999999863
No 68
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3e-40 Score=361.55 Aligned_cols=272 Identities=24% Similarity=0.372 Sum_probs=218.7
Q ss_pred ccchhHHHHhhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeE
Q 002892 574 RTSYLDIQQATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIK 645 (870)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~ 645 (870)
.+.........++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 344555666778999999999999999999973 246789999997643 34456789999999999 7899999
Q ss_pred EeeeeeeCC-eeEEEEecCCCCCHHHHHhhcCC-----------------------------------------------
Q 002892 646 IFSSCCNLD-FKALVLEFMPNGSLEKWLYSHNY----------------------------------------------- 677 (870)
Q Consensus 646 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 677 (870)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988755 48999999999999999985432
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 678 ------------------FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 678 ------------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
.+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 2899999999999999999999 6679999999999999999999999999998775544
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
.........||+.|+|||++.+..++.++||||||+++|||++ |+.||......+. .............
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~--------- 317 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMRA--------- 317 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCCCCC---------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCCCCC---------
Confidence 4444555678999999999999999999999999999999998 9999976332221 1111111110000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
+..++..+.+++..||+.+|++||++.||++.|+++.+..
T Consensus 318 --------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 --------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0112346889999999999999999999999999998753
No 69
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=349.40 Aligned_cols=260 Identities=23% Similarity=0.379 Sum_probs=211.0
Q ss_pred HhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
...++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 445789999999999999999999988889999999765322 3668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....... .
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 175 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-Y 175 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-H
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-c
Confidence 99999999999876666999999999999999999999 6679999999999999999999999999998764321 1
Q ss_pred ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 742 VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+......
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~~------------- 240 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHIAQGLRL------------- 240 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTCCC-------------
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH--HHHHHhcccCC-------------
Confidence 12233456788999999998899999999999999999998 999997632211 11111100000
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 241 ----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 ----YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00011234688999999999999999999999999998764
No 70
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=362.68 Aligned_cols=263 Identities=25% Similarity=0.402 Sum_probs=215.7
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec--------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeee
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCC 651 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 651 (870)
...++|++.+.||+|+||.||+|+.. ++..||||+++... ......+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34578999999999999999999852 23579999997653 34457789999999999 8999999999999
Q ss_pred eCCeeEEEEecCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCce
Q 002892 652 NLDFKALVLEFMPNGSLEKWLYSHN---------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNI 716 (870)
Q Consensus 652 ~~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 716 (870)
..+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceE
Confidence 9999999999999999999998653 35899999999999999999999 66799999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccc
Q 002892 717 LLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEM 795 (870)
Q Consensus 717 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~ 795 (870)
+++.++.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~ 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--E 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--H
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--H
Confidence 999999999999999987755444344445567899999999999999999999999999999999 9999875321 1
Q ss_pred hHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 796 SLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.....+...... . .+..++..+.+++.+||+.+|++||++.||++.|+++.+..
T Consensus 301 ~~~~~~~~~~~~------------~-----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 301 ELFKLLKEGHRM------------D-----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHTTCCC------------C-----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCCC------------C-----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 111111111000 0 01123457899999999999999999999999999998653
No 71
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-40 Score=356.81 Aligned_cols=259 Identities=24% Similarity=0.443 Sum_probs=203.8
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcE----EEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTN----VAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 357889999999999999999854 4444 5777775433 344577899999999999999999999998754 78
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+|+||+++|+|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 899999999999999987777999999999999999999999 56799999999999999999999999999987765
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||+..... .....+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~--------- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERL--------- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCC---------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCCC---------
Confidence 544444445567889999999999999999999999999999999 99999763222 122211111000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 239 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 239 --------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 00112345688999999999999999999999999988753
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=364.33 Aligned_cols=262 Identities=23% Similarity=0.355 Sum_probs=211.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec------CCcEEEEEEeech-hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQ-LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 656 (870)
.++|++.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467889999999999999999843 4678999998654 244456788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC---ceEEe
Q 002892 657 ALVLEFMPNGSLEKWLYSHN------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM---TARVS 727 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~ 727 (870)
++||||+++|+|.+++...+ ..+++.+++.++.|++.||+||| ++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998543 45899999999999999999999 66799999999999999555 59999
Q ss_pred ccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcC
Q 002892 728 DFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLP 806 (870)
Q Consensus 728 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 806 (870)
|||++................||+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+.....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i~~~~~ 304 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGR 304 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC
Confidence 9999976533332333344567899999999999999999999999999999998 9999875321 111111111000
Q ss_pred CchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 807 RGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
...+..++..+.+++.+||+.+|++||++.+|++.|+.+.+...
T Consensus 305 -----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 305 -----------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp -----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred -----------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 00011234568899999999999999999999999999887543
No 73
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.8e-40 Score=347.94 Aligned_cols=264 Identities=25% Similarity=0.437 Sum_probs=199.8
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
+...++|++.+.||+|+||.||+|+.. ..||+|+++... ....+.+.+|++++++++||||++++++. .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 344678999999999999999999854 469999986543 44567899999999999999999999965 4566899
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++++|.+++......+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999999999877777999999999999999999999 666999999999999999999999999999866543
Q ss_pred CCcccccccccccccCCccccc---CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 739 DDSVTQTMTMATIGYMAPEYAS---DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
..........||+.|+|||++. +..++.++||||+|+++|||++|+.||......+...........+.....+
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 250 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV--- 250 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSS---
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhc---
Confidence 3333344456899999999986 5678889999999999999999999997643322211111111111111110
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
...++..+.+++.+||+.+|++||++.++++.|+++.+
T Consensus 251 -----------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 251 -----------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -----------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11235678999999999999999999999999998864
No 74
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=361.30 Aligned_cols=266 Identities=23% Similarity=0.375 Sum_probs=214.1
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEec------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeee
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCN 652 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 652 (870)
.....++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999964 34889999997653 3445779999999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSHN-----------------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHC 709 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~ 709 (870)
.+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 999999999999999999998632 46899999999999999999999 6679999
Q ss_pred ccCCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCC
Q 002892 710 NLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTD 788 (870)
Q Consensus 710 dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~ 788 (870)
||||+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 278 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY 278 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence 9999999999999999999999987644333333344568899999999998899999999999999999999 999987
Q ss_pred ccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 789 EMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
..... .....+.... .. ..+..++..+.+++..||+.+|++||++.++++.|+++.+.+.
T Consensus 279 ~~~~~--~~~~~~~~~~-----------~~------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 279 GMAHE--EVIYYVRDGN-----------IL------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp TSCHH--HHHHHHHTTC-----------CC------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred CCChH--HHHHHHhCCC-----------cC------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 53211 1111111000 00 0011234578999999999999999999999999999987653
No 75
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.4e-40 Score=353.15 Aligned_cols=261 Identities=28% Similarity=0.427 Sum_probs=215.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 457889999999999999999985 245789999997643 3455778999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccC
Q 002892 656 KALVLEFMPNGSLEKWLYSHN-----------------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLK 712 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 712 (870)
.++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 999999999999999998543 23899999999999999999999 5669999999
Q ss_pred CCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccc
Q 002892 713 PNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMF 791 (870)
Q Consensus 713 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~ 791 (870)
|+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||+|+++|||++ |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987755444334444567889999999999899999999999999999999 999997632
Q ss_pred cccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 792 TGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
.. .....+....... .+..++..+.+++.+||+.||++||++.++++.|+++.+.
T Consensus 258 ~~--~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 258 PE--RLFNLLKTGHRME-----------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG--GHHHHHHTTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH--HHHHHhhcCCcCC-----------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 1111111110000 0112345789999999999999999999999999998765
No 76
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.2e-40 Score=352.73 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=204.8
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh-HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999965 789999999865432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++..+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987554 3899999999999999999999 667999999999999999999999999999876433333
Q ss_pred ccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 742 VTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||............+.......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------- 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-------------
Confidence 33345679999999999987765 7799999999999999999999976433333222222111100
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.....++..+.+++.+||+.||++|||+.|+++
T Consensus 229 ----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 001123446789999999999999999999975
No 77
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.4e-40 Score=346.62 Aligned_cols=262 Identities=24% Similarity=0.397 Sum_probs=207.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeech---hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQ---LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999864 6899999998543 244567889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999998654 4899999999999999999999 6679999999999999999999999999998764322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||............ .....+. ... .
T Consensus 166 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~~~~-~~~----~--- 235 (294)
T 4eqm_A 166 L-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVPN-VTT----D--- 235 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH-HSSCCCC-HHH----H---
T ss_pred c-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hhccCCC-cch----h---
Confidence 1 2223456899999999999999999999999999999999999999763221111000 0000000 000 0
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhHhH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-CMTDVVVKLQKIKQT 865 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~i~~~ 865 (870)
....++..+.+++.+|++.+|++|| +++++.+.|+++...
T Consensus 236 ------~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 236 ------VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp ------SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred ------cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0112345789999999999999999 999999999877543
No 78
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-39 Score=356.52 Aligned_cols=271 Identities=14% Similarity=0.154 Sum_probs=211.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEecC------CcEEEEEEeechhhHH-----------HHHHHHHHHHHHhcCCCceeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFD------GTNVAIKVFNLQLERA-----------FRSFESECEVLRNVRHRNLIK 645 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 645 (870)
..++|++.+.||+|+||.||+|.+.+ ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998754 4789999987653211 112344566677888999999
Q ss_pred EeeeeeeC----CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC--
Q 002892 646 IFSSCCNL----DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-- 719 (870)
Q Consensus 646 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-- 719 (870)
+++++... ...++||||+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 4579999999 99999999987677999999999999999999999 66799999999999998
Q ss_pred CCCceEEeccccccccCCCCCc-----ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc
Q 002892 720 KNMTARVSDFGISKLLGEDDDS-----VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE 794 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 794 (870)
.++.+||+|||++..+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 8899999999999876432211 1113345999999999999999999999999999999999999999863322
Q ss_pred chHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 795 MSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.....+..........++.+..+.. ..++..+.+++..||+.+|++||++.+|++.|+++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPA--------ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCT--------TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccc--------ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 2222222222223333333333211 123557899999999999999999999999999988764
No 79
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.5e-39 Score=344.96 Aligned_cols=266 Identities=24% Similarity=0.400 Sum_probs=205.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHh--cCCCceeEEeeeeee----CCee
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRN--VRHRNLIKIFSSCCN----LDFK 656 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~~~ 656 (870)
..++|++.+.||+|+||.||+|+. +++.||||++..... ..+..|.+++.. ++||||+++++++.. ....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 357899999999999999999987 689999999875432 344556666655 799999999998654 3467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecccCCCceeeCCCCceEEecccc
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-----HSTPVVHCNLKPNNILLDKNMTARVSDFGI 731 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 731 (870)
++||||+++|+|.++++.. .+++..++.++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+
T Consensus 82 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 8999999999999999654 489999999999999999999932 245699999999999999999999999999
Q ss_pred ccccCCCCCcc--cccccccccccCCcccccCC------CcCcccchHhHHHHHHHHHhC----------CCCCCccccc
Q 002892 732 SKLLGEDDDSV--TQTMTMATIGYMAPEYASDG------IISPKCDVYSYGVLLMETFTR----------KKPTDEMFTG 793 (870)
Q Consensus 732 a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg----------~~p~~~~~~~ 793 (870)
+.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 97664333221 12334789999999999876 456799999999999999999 7887664443
Q ss_pred cchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 002892 794 EMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKI 862 (870)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i 862 (870)
......+......... ............++..+.+++.+||+.||++|||+.+|++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQ--------RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCC--------CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCC--------CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 3333332221111110 001111122234677899999999999999999999999999986
No 80
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.1e-39 Score=346.34 Aligned_cols=270 Identities=21% Similarity=0.306 Sum_probs=207.9
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
+...++|++.+.||+|+||+||+|+..+|+.||+|++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 34567899999999999999999998889999999987543 2234678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||++ +++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...+..
T Consensus 97 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 97 VFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 999997 4898888877777999999999999999999999 667999999999999999999999999999876432
Q ss_pred CCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh---cCCchhhhcc
Q 002892 739 DDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS---LPRGLTEVVD 814 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 814 (870)
. .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ ....+.... .+..+....+
T Consensus 173 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 173 V--RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp C--C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTT
T ss_pred c--ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhc
Confidence 2 22334568999999999876 568999999999999999999999998643332 223322211 1111111111
Q ss_pred hhhhc-----ccC-cch--HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 ASLVR-----EVQ-PSY--AKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 ~~~~~-----~~~-~~~--~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..... ... ... ....+..++.+++.+|++.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 000 000 01123456889999999999999999999986
No 81
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.3e-40 Score=355.52 Aligned_cols=266 Identities=24% Similarity=0.410 Sum_probs=197.2
Q ss_pred HHHHhhcCCCCCCeeccccceeEEEEEecC-Cc---EEEEEEeech--hhHHHHHHHHHHHHHHhcCCCceeEEeeeeee
Q 002892 579 DIQQATDGFNECNLLGAGSFGSVYKGTLFD-GT---NVAIKVFNLQ--LERAFRSFESECEVLRNVRHRNLIKIFSSCCN 652 (870)
Q Consensus 579 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~-~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 652 (870)
+.....++|++.+.||+|+||.||+|+... ++ .||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 344556789999999999999999998653 32 7999999765 34456789999999999999999999999987
Q ss_pred CCee------EEEEecCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC
Q 002892 653 LDFK------ALVLEFMPNGSLEKWLYSHN-----YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN 721 (870)
Q Consensus 653 ~~~~------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 721 (870)
.... ++||||+++|+|.+++.... ..+++..++.++.|++.||+||| ++||+||||||+||+++++
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCC
Confidence 6655 89999999999999997432 25899999999999999999999 6679999999999999999
Q ss_pred CceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHH
Q 002892 722 MTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHW 800 (870)
Q Consensus 722 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 800 (870)
+.+||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |..||......+ ....+
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~ 252 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYL 252 (323)
T ss_dssp SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHH
T ss_pred CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHHHH
Confidence 9999999999987754443334445567889999999999999999999999999999999 899987632221 11111
Q ss_pred HHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 801 IKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...... ..+..++..+.+++.+||+.||++||++.++++.|+++.+.-
T Consensus 253 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 253 IGGNRL------------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HTTCCC------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hcCCCC------------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 100000 001123457899999999999999999999999999987643
No 82
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.8e-39 Score=347.75 Aligned_cols=248 Identities=26% Similarity=0.318 Sum_probs=203.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ......+.+|++++++++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999965 68999999997653 33456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999998654 4899999999999999999999 6679999999999999999999999999998643221
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. .
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~---------------~ 220 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM---------------E 220 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH---------------C
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHc---------------C
Confidence 223345799999999999999999999999999999999999999975211 111111100 0
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 857 (870)
... + +..++..+.+++.+||+.||++|| ++.|+++
T Consensus 221 ~~~--~-p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 221 EIR--F-PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp CCC--C-CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCC--C-CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 000 0 012245688999999999999999 8998875
No 83
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-39 Score=344.44 Aligned_cols=265 Identities=15% Similarity=0.127 Sum_probs=214.7
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+|+++++++ +|++++++++++......++||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 356799999999999999999995 5789999999865432 24578899999999 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc-----eEEecccccccc
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT-----ARVSDFGISKLL 735 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~a~~~ 735 (870)
||+ +++|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||++...
T Consensus 86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999 99999999977667999999999999999999999 777999999999999987776 999999999877
Q ss_pred CCCCCc-----ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccch--HHHHHHHhcCCc
Q 002892 736 GEDDDS-----VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMS--LKHWIKLSLPRG 808 (870)
Q Consensus 736 ~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~ 808 (870)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......... .........+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP 241 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence 543221 1234456899999999999999999999999999999999999999764322111 111111100000
Q ss_pred hhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 809 LTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.. .....++..+.+++..||+.+|++||++++|++.|+++.+...
T Consensus 242 ~~--------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 242 LR--------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HH--------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HH--------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00 0011235678999999999999999999999999999987653
No 84
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.6e-39 Score=351.24 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=205.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhH------HHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLER------AFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
..+.|++.+.||+|+||.||+|... +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4568999999999999999999965 6899999999765321 34678999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC----ceEEecccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM----TARVSDFGI 731 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 731 (870)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999997654 4899999999999999999999 56799999999999998877 799999999
Q ss_pred ccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 732 SKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 732 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+.... .....+......
T Consensus 166 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~----- 236 (361)
T 2yab_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITAVSYD----- 236 (361)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCC-----
T ss_pred ceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCC-----
Confidence 98764322 223456999999999999999999999999999999999999999753211 111111110000
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
++ .......+..+.+++.+||..||++|||+.|+++
T Consensus 237 -~~---------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FD---------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CC---------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CC---------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0011123456889999999999999999999975
No 85
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.5e-38 Score=358.33 Aligned_cols=346 Identities=28% Similarity=0.415 Sum_probs=198.1
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEE
Q 002892 38 LRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLN 117 (870)
Q Consensus 38 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 117 (870)
+++++.|++++|.++ .+|. +..+++|++|+|++|.+++. +. +.++++|++|++++|.+++..+ ++.+++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 445555555555555 3332 44555555555555555532 22 5555555555555555553222 55555555555
Q ss_pred eecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccc
Q 002892 118 FADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLT 197 (870)
Q Consensus 118 l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 197 (870)
+++|++++..+ +..+++|++|++++|++.+. + .+..+++|++|+++ |.+.+..
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~---------------------- 171 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK---------------------- 171 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG----------------------
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch----------------------
Confidence 55555553222 55555555555555555432 1 24555555555553 2222111
Q ss_pred cccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCC
Q 002892 198 GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLD 277 (870)
Q Consensus 198 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (870)
.+.++++|++|++++|.+++. ..+..+++|++|++++|.++... .+..+++|+.|++++|++.
T Consensus 172 -----~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~----------~~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 172 -----PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDIT----------PLGILTNLDELSLNGNQLK 234 (466)
T ss_dssp -----GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG----------GGGGCTTCCEEECCSSCCC
T ss_pred -----hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccc----------cccccCCCCEEECCCCCcc
Confidence 133344444444444444421 12444444444444444444321 1334455555555555544
Q ss_pred CCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCccccc
Q 002892 278 SILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLS 357 (870)
Q Consensus 278 ~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~ 357 (870)
++ ..+..+++|+.|++++|.+.+..+ +.
T Consensus 235 ~~---------------------------~~l~~l~~L~~L~l~~n~l~~~~~-------------------------~~ 262 (466)
T 1o6v_A 235 DI---------------------------GTLASLTNLTDLDLANNQISNLAP-------------------------LS 262 (466)
T ss_dssp CC---------------------------GGGGGCTTCSEEECCSSCCCCCGG-------------------------GT
T ss_pred cc---------------------------hhhhcCCCCCEEECCCCccccchh-------------------------hh
Confidence 21 124445566666666666553211 34
Q ss_pred CccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEE
Q 002892 358 SLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITL 437 (870)
Q Consensus 358 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 437 (870)
.+++|++|++++|++++..+ +..+++|+.|++++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 45667777777777765444 6677777777777777775433 6777788888888888876655 6777888888
Q ss_pred EcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccccc
Q 002892 438 SLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 438 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 495 (870)
++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 8888888764 457788888888888888886666 77788888888888888773
No 86
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-38 Score=345.80 Aligned_cols=274 Identities=25% Similarity=0.396 Sum_probs=208.3
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHh--cCCCceeEEeeeeeeC----
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRN--VRHRNLIKIFSSCCNL---- 653 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~---- 653 (870)
.....++|++.+.||+|+||.||+|+.. ++.||||++..... ..+..|.+++.. ++||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445678999999999999999999875 89999999865432 233445555544 4899999999999876
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecccCCCceeeCCCCceEEec
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-----HSTPVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
...++||||+++|+|.++++... +++..++.++.|++.||+|||.. +..+|+||||||+||+++.++.+||+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred CceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 68899999999999999997653 89999999999999999999943 112899999999999999999999999
Q ss_pred cccccccCCCCCcc--cccccccccccCCcccccCCCcCcc------cchHhHHHHHHHHHhC----------CCCCCcc
Q 002892 729 FGISKLLGEDDDSV--TQTMTMATIGYMAPEYASDGIISPK------CDVYSYGVLLMETFTR----------KKPTDEM 790 (870)
Q Consensus 729 fg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~------sDvwslG~il~elltg----------~~p~~~~ 790 (870)
||++..+....... ......||+.|+|||++.+...+.+ +|||||||++|||++| +.||...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99997664332221 1224568999999999987766655 9999999999999999 5666544
Q ss_pred ccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 791 FTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.........+....... .........+....++..+.+++.+||+.||++||++.+|++.|+++.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIK--------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp SCSSCCHHHHHHHHTTS--------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred cCCCCchhhhHHHHhhh--------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 33332222222111111 1111112223334678889999999999999999999999999999987654
No 87
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.2e-39 Score=349.81 Aligned_cols=262 Identities=15% Similarity=0.158 Sum_probs=211.8
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46899999999999999999995 5789999999875432 24578899999999 99999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc-----eEEeccccccccC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT-----ARVSDFGISKLLG 736 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 736 (870)
|+ +++|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||++..+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 99999999976667999999999999999999999 667999999999999998887 9999999998764
Q ss_pred CCCCcc-----cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc--hHHHHHHHhcCCch
Q 002892 737 EDDDSV-----TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM--SLKHWIKLSLPRGL 809 (870)
Q Consensus 737 ~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~ 809 (870)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....+.....+..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP- 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-
Confidence 332211 12345799999999999999999999999999999999999999986422211 0111111000000
Q ss_pred hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 810 TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.......++ .+.+++..||+.+|++||++++|.+.|+++.+..
T Consensus 241 -------------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 241 -------------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -------------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -------------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000001124 7899999999999999999999999999887754
No 88
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.1e-40 Score=343.18 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=212.8
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecC
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFM 663 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 663 (870)
.++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 4678899999999999999999888899999999765432 367899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCccc
Q 002892 664 PNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVT 743 (870)
Q Consensus 664 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 743 (870)
++++|.+++...+..+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++....... ...
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccc
Confidence 999999999977667999999999999999999999 6669999999999999999999999999998664221 112
Q ss_pred ccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccC
Q 002892 744 QTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQ 822 (870)
Q Consensus 744 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (870)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~~--------------- 224 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL--------------- 224 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC---------------
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCcC---------------
Confidence 233456788999999998899999999999999999999 89998753211 111111110000
Q ss_pred cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 823 PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 823 ~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 225 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 --YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00011245688999999999999999999999999999864
No 89
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.8e-39 Score=346.69 Aligned_cols=264 Identities=23% Similarity=0.348 Sum_probs=216.7
Q ss_pred HhhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeC
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNL 653 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 653 (870)
...++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3457899999999999999999984 356889999997653 23457789999999999 999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCC-----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCce
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNY-----------------FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNI 716 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Ni 716 (870)
+..++||||+++|+|.+++...+. .+++..++.++.|++.||+||| ++||+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceE
Confidence 999999999999999999986542 4899999999999999999999 66799999999999
Q ss_pred eeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccc
Q 002892 717 LLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEM 795 (870)
Q Consensus 717 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~ 795 (870)
+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 999999999999999987765444334444567889999999998999999999999999999999 999987643221
Q ss_pred hHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 796 SLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
............ . .+..++..+.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 256 ~~~~~~~~~~~~------------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 256 KFYKMIKEGFRM------------L-----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHHHTCCC------------C-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCCCC------------C-----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 111111111100 0 01123457899999999999999999999999999987653
No 90
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1e-39 Score=344.04 Aligned_cols=261 Identities=22% Similarity=0.337 Sum_probs=201.3
Q ss_pred HhhcCCCCCCeeccccceeEEEEEecC----CcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLFD----GTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK 656 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 656 (870)
...++|++.+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 445789999999999999999998642 4579999987543 344567899999999999999999999984 4678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++++|.+++...+..+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccC
Confidence 9999999999999999977767999999999999999999999 6679999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......+++.|+|||++.+..++.++||||+|+++|||++ |..||......+ ....+......
T Consensus 168 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~~-------- 236 (281)
T 1mp8_A 168 DSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERL-------- 236 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC--------
T ss_pred cccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCCC--------
Confidence 3322 12233456789999999998899999999999999999997 999997632221 11111110000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+..
T Consensus 237 ---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 ---------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 001123457889999999999999999999999999998764
No 91
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=364.12 Aligned_cols=320 Identities=20% Similarity=0.198 Sum_probs=158.6
Q ss_pred cEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecC
Q 002892 42 KFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADN 121 (870)
Q Consensus 42 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N 121 (870)
+.++.+++.++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 34555555555 4454332 35555555555555544555555555555555555555444555555555555555555
Q ss_pred ccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccC
Q 002892 122 NLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIP 201 (870)
Q Consensus 122 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 201 (870)
++++..+..|.++++|++|+|++|++++..+..+..+++|++|++++|+ +++..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~-------------------------l~~~~~ 145 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDND-------------------------LVYISH 145 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTT-------------------------CCEECT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCc-------------------------cceeCh
Confidence 5554333444555555555555555444333333333333333333333 333334
Q ss_pred CcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCC
Q 002892 202 NSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILP 281 (870)
Q Consensus 202 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 281 (870)
..|..+++|++|+|++|++++..+..|.++++|+.|+|++|.+..+.
T Consensus 146 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~--------------------------------- 192 (477)
T 2id5_A 146 RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR--------------------------------- 192 (477)
T ss_dssp TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC---------------------------------
T ss_pred hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC---------------------------------
Confidence 44555555555555555555444444444444444444444443221
Q ss_pred ccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccc
Q 002892 282 PLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLIS 361 (870)
Q Consensus 282 ~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~ 361 (870)
+..+..+++|+.|++++|...+.+|.. .....+
T Consensus 193 ------------------------~~~~~~l~~L~~L~l~~~~~~~~~~~~-----------------------~~~~~~ 225 (477)
T 2id5_A 193 ------------------------DYSFKRLYRLKVLEISHWPYLDTMTPN-----------------------CLYGLN 225 (477)
T ss_dssp ------------------------TTCSCSCTTCCEEEEECCTTCCEECTT-----------------------TTTTCC
T ss_pred ------------------------hhhcccCcccceeeCCCCccccccCcc-----------------------cccCcc
Confidence 122334445555555555443333221 111235
Q ss_pred cceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCC
Q 002892 362 LRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLAR 441 (870)
Q Consensus 362 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 441 (870)
|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++
T Consensus 226 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 305 (477)
T 2id5_A 226 LTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305 (477)
T ss_dssp CSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCS
T ss_pred ccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCC
Confidence 66666666666544444555555555555555555544444455555555555555555554455555555555555555
Q ss_pred CcccCcccccccCCCCCCeEecCCCccc
Q 002892 442 NRFQDSIPDSFGSLTSLEYLDLSNNNLS 469 (870)
Q Consensus 442 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 469 (870)
|++++..+..|..+++|+.|+|++|.++
T Consensus 306 N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 306 NQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp SCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred CcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 5555444444455555555555555544
No 92
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=351.75 Aligned_cols=263 Identities=22% Similarity=0.352 Sum_probs=211.5
Q ss_pred HhhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeC
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNL 653 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 653 (870)
...++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3457899999999999999999985 245689999997543 33456789999999999 899999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCC----------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNY----------------------FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNL 711 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 711 (870)
+..++||||+++|+|.+++...+. .+++..++.++.|++.||+||| ++||+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 999999999999999999986542 3789999999999999999999 667999999
Q ss_pred CCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCcc
Q 002892 712 KPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEM 790 (870)
Q Consensus 712 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~ 790 (870)
||+||+++.++.+||+|||++................||+.|+|||++.++.++.++||||||+++|||+| |..||...
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999987654443334445567889999999998999999999999999999998 99999764
Q ss_pred ccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 791 FTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
... .............. .+..++..+.+++..||+.||++||++.++++.|+.+.+.
T Consensus 279 ~~~-~~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 279 PVD-ANFYKLIQNGFKMD-----------------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCS-HHHHHHHHTTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CcH-HHHHHHHhcCCCCC-----------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 222 11222111111000 0112345789999999999999999999999999988664
No 93
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3e-39 Score=353.89 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=208.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++|||
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 3468999999999999999999865 689999999987655556788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC--CCceEEeccccccccCCCC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK--NMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~ 739 (870)
|+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++.......
T Consensus 129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999999877667999999999999999999999 667999999999999974 4789999999998764332
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
......||+.|+|||++.+..++.++||||+||++|||++|..||..... ......+....+.. +.
T Consensus 206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-~~~~~~i~~~~~~~------~~---- 271 (387)
T 1kob_A 206 ---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWEF------DE---- 271 (387)
T ss_dssp ---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-HHHHHHHHHCCCCC------CS----
T ss_pred ---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCC------Cc----
Confidence 22334689999999999999999999999999999999999999975321 11111111111000 00
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.....++..+.+++.+||+.||++||++.|+++
T Consensus 272 -----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 272 -----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp -----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred -----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 001123456889999999999999999999986
No 94
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=342.16 Aligned_cols=256 Identities=27% Similarity=0.423 Sum_probs=201.8
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecC
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFM 663 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 663 (870)
.++|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 457888999999999999999865 789999998654 33467899999999999999999999887 4479999999
Q ss_pred CCCCHHHHHhhcCC--CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc-eEEeccccccccCCCCC
Q 002892 664 PNGSLEKWLYSHNY--FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT-ARVSDFGISKLLGEDDD 740 (870)
Q Consensus 664 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~a~~~~~~~~ 740 (870)
++|+|.+++..... .+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999985542 4789999999999999999999644478999999999999998886 799999999765322
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||+....................
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------ 224 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP------------ 224 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC------------
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC------------
Confidence 22345899999999999999999999999999999999999999764322211111111100000
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
....++..+.+++.+||+.+|++||++.++++.|+++.+.+
T Consensus 225 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 225 -----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp -----CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred -----cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 00123456889999999999999999999999999988754
No 95
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-39 Score=351.13 Aligned_cols=262 Identities=23% Similarity=0.417 Sum_probs=213.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEec--------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeee
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCN 652 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 652 (870)
..++|++.+.||+|+||.||+|++. +++.||+|+++... ......+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999863 46789999997653 34567789999999999 89999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCcee
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSHN---------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNIL 717 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 717 (870)
.+..++||||+++|+|.+++...+ ..+++..++.++.|++.||+||| +++|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence 999999999999999999998643 24899999999999999999999 667999999999999
Q ss_pred eCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccch
Q 002892 718 LDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMS 796 (870)
Q Consensus 718 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~ 796 (870)
++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~ 267 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 267 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--H
Confidence 99999999999999987754443333444567889999999988899999999999999999999 99998753211 1
Q ss_pred HHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 797 LKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
....+...... . .+..++..+.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 268 ~~~~~~~~~~~------------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 268 LFKLLKEGHRM------------D-----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HHHHHHHTCCC------------C-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCC------------C-----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 11111111000 0 01123457899999999999999999999999999997643
No 96
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-39 Score=347.52 Aligned_cols=270 Identities=22% Similarity=0.374 Sum_probs=209.5
Q ss_pred cCCCCCCeeccccceeEEEEEe-----cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC--Cee
Q 002892 585 DGFNECNLLGAGSFGSVYKGTL-----FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL--DFK 656 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~ 656 (870)
+.|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999999983 368999999997543 33457789999999999999999999999876 668
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++++|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999876667999999999999999999999 6679999999999999999999999999998775
Q ss_pred CCCCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc---hhhh
Q 002892 737 EDDDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG---LTEV 812 (870)
Q Consensus 737 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 812 (870)
..... .......||..|+|||++.+..++.++||||+|+++|||++|+.|+.... ..+.....+.. ....
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccCHHH
Confidence 43322 22334567888999999999999999999999999999999999865321 11111111110 0000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
+...+.... ....+..++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus 252 ~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 252 LVNTLKEGK-RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHhccC-CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 111111110 001112345679999999999999999999999999998864
No 97
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.5e-40 Score=355.08 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=205.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcE----EEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTN----VAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|++.+.||+|+||.||+|.+. +++. ||+|++.... ......+.+|+.++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357889999999999999999864 4554 7777765432 223355778999999999999999999886 46688
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999877667999999999999999999999 66699999999999999999999999999998765
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
...........+++.|+|||++.++.++.++||||||+++|||++ |+.||...... .....+......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~--------- 236 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERL--------- 236 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBC---------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCC---------
Confidence 544444455668889999999998999999999999999999999 99999763221 111111111000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 237 --------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 237 --------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp --------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred --------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00011233578899999999999999999999999988653
No 98
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.2e-39 Score=348.63 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh-----HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++...+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 357899999999999999999865 689999999975431 13567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc---eEEecccc
Q 002892 658 LVLEFMPNGSLEKWLYSH---NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT---ARVSDFGI 731 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 731 (870)
+||||+++++|.+++... +..+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888643 345899999999999999999999 667999999999999987654 99999999
Q ss_pred ccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 732 SKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 732 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
+....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ......+.......
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~---- 251 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKM---- 251 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCC----
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCC----
Confidence 98775432 22334579999999999999999999999999999999999999997621 11111111111100
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.......++..+.+++.+||+.||++||++.|+++
T Consensus 252 -----------~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 -----------NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -----------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00011123457899999999999999999999975
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.5e-39 Score=341.23 Aligned_cols=252 Identities=28% Similarity=0.480 Sum_probs=204.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhH-------HHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLER-------AFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 478999999999999999999964 7899999998654321 1267899999999999999999999986554
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeCCCCc-----eEEec
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLDKNMT-----ARVSD 728 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~D 728 (870)
++||||+++|+|.+++......+++..++.++.|++.|++||| +++ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 7999999999999999877777999999999999999999999 777 999999999999988776 99999
Q ss_pred cccccccCCCCCcccccccccccccCCcccc--cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hc
Q 002892 729 FGISKLLGEDDDSVTQTMTMATIGYMAPEYA--SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SL 805 (870)
Q Consensus 729 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~ 805 (870)
||++..... ......||+.|+|||++ ....++.++||||+|+++|||++|+.||................ ..
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 999975432 23345689999999998 45567899999999999999999999997643332221121111 00
Q ss_pred CCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 002892 806 PRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKI 862 (870)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i 862 (870)
... .+..++..+.+++.+||+.||++||++.++++.|+++
T Consensus 248 ~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 RPT-----------------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCC-----------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCC-----------------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 000 0112345789999999999999999999999999864
No 100
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-39 Score=364.08 Aligned_cols=254 Identities=26% Similarity=0.390 Sum_probs=208.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC-eeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD-FKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4567888999999999999999875 7899999997654 3467899999999999999999999987655 7899999
Q ss_pred cCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSHNY-FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
|+++|+|.+++...+. .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999986543 4799999999999999999999 566999999999999999999999999999854321
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~------------- 404 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK------------- 404 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCC-------------
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC-------------
Confidence 112357889999999999999999999999999999998 999997642221 1111111000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...+..++..+.+++.+||+.+|++||++.++++.|+++....
T Consensus 405 ----~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 405 ----MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ----CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 0011234567999999999999999999999999999987653
No 101
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=345.91 Aligned_cols=251 Identities=21% Similarity=0.276 Sum_probs=204.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh------HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE------RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 656 (870)
.+.|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999965 689999999976432 1356789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC----ceEEeccccc
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM----TARVSDFGIS 732 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~a 732 (870)
++||||+++++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999997644 4899999999999999999999 66799999999999998887 8999999999
Q ss_pred cccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 733 KLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 733 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .............
T Consensus 166 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~----- 236 (326)
T 2y0a_A 166 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNYEF----- 236 (326)
T ss_dssp EECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCC-----
T ss_pred eECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCc-----
Confidence 8764322 223356899999999999999999999999999999999999999653211 1111111100000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||+.||++|||+.|+++
T Consensus 237 ----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 237 ----------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp ----------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00011123456889999999999999999999986
No 102
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=342.78 Aligned_cols=273 Identities=23% Similarity=0.309 Sum_probs=210.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC--eeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD--FKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367899999999999999999966 58999999997543 334567789999999999999999999987655 77999
Q ss_pred EecCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee----CCCCceEEecccccc
Q 002892 660 LEFMPNGSLEKWLYSHN--YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL----DKNMTARVSDFGISK 733 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~a~ 733 (870)
|||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++.
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998543 33899999999999999999999 6679999999999999 778889999999998
Q ss_pred ccCCCCCcccccccccccccCCccccc--------CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHH--HH
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYAS--------DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWI--KL 803 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~--~~ 803 (870)
....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.............. ..
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 7644322 23346899999999886 57789999999999999999999999975433222211111 11
Q ss_pred hcCCc-hhhhc---chhhhc--c-cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 002892 804 SLPRG-LTEVV---DASLVR--E-VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKI 862 (870)
Q Consensus 804 ~~~~~-~~~~~---~~~~~~--~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i 862 (870)
..+.. +..+. ...+.. . .............+.+++.+||+.||++||+++|+++...+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 12211 11110 000000 0 000111245667899999999999999999999999987653
No 103
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.5e-39 Score=342.26 Aligned_cols=266 Identities=20% Similarity=0.296 Sum_probs=202.1
Q ss_pred cCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
++|++.+.||+|+||.||+|+..+++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999998889999999986543 22346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 975 999999876667999999999999999999999 6679999999999999999999999999998764322 1
Q ss_pred cccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC--chhhh-----c
Q 002892 743 TQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPR--GLTEV-----V 813 (870)
Q Consensus 743 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~-----~ 813 (870)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+....... .+. .+... .
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhccccc
Confidence 2234468999999999876 45899999999999999999999999764222 1222222211 111 01110 0
Q ss_pred chhhhcccCc--chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 814 DASLVREVQP--SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 814 ~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
++........ .......+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000 0000123456889999999999999999999975
No 104
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.5e-39 Score=340.46 Aligned_cols=267 Identities=21% Similarity=0.265 Sum_probs=204.3
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999965 68999999997543 3345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++ ++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...+...
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9975 676766665566999999999999999999999 6679999999999999999999999999998764322
Q ss_pred ccccccccccccCCcccccCCC-cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc-CC--chhhhcchhh
Q 002892 742 VTQTMTMATIGYMAPEYASDGI-ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL-PR--GLTEVVDASL 817 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 817 (870)
.......||+.|+|||++.+.. ++.++||||+||++|||++|+.||.........+..+..... +. .+.......-
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2233456899999999997765 799999999999999999998886443333333333332211 11 1111110000
Q ss_pred hccc-------CcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 818 VREV-------QPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 818 ~~~~-------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.... .........+..+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0000 000001123456889999999999999999999976
No 105
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1e-39 Score=352.16 Aligned_cols=277 Identities=26% Similarity=0.328 Sum_probs=213.9
Q ss_pred hcCCCCCCeeccccceeEEEEEe-----cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeee--eCCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-----FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCC--NLDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~ 656 (870)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36789999999999999999984 368899999998776666778999999999999999999999886 45678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++++|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 8999999999999999876666999999999999999999999 6679999999999999999999999999998775
Q ss_pred CCCCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 737 EDDDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 737 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
..... .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ..+...........+...
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCERDVPALSRLLEL 256 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC----CCHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccccccccHHHHHHH
Confidence 43322 223345678889999999998999999999999999999999999865211100 000000000011111111
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.. ... ....+..++..+.+++.+||+.+|++||++.++++.|+++.....
T Consensus 257 ~~-~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 257 LE-EGQ-RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HH-TTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hh-ccc-CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11 100 001122345679999999999999999999999999999876543
No 106
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.3e-39 Score=350.03 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=204.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999865 68999999997643 34457789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC---CceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN---MTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~~~~ 736 (870)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.+ +.+||+|||++....
T Consensus 107 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 99999999999997654 4899999999999999999999 6679999999999999865 459999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.......
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~~-------- 249 (362)
T 2bdw_A 183 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYDY-------- 249 (362)
T ss_dssp TCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCC--------
T ss_pred CCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCCCC--------
Confidence 322 22345699999999999999999999999999999999999999975211 11111111100000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+......++..+.+++.+||+.||++||++.++++.
T Consensus 250 ------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 ------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000111234568899999999999999999998753
No 107
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=356.92 Aligned_cols=254 Identities=20% Similarity=0.277 Sum_probs=204.4
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 34578999999999999999999854 78999999987643 3445678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC---CCCceEEecccccccc
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD---KNMTARVSDFGISKLL 735 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a~~~ 735 (870)
||||+++|+|.+++...+. +++..+..++.||+.||+||| ++||+||||||+||+++ .++.+||+|||++...
T Consensus 88 v~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999987654 899999999999999999999 66799999999999998 4688999999999876
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.......
T Consensus 164 ~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~~~-------- 232 (444)
T 3soa_A 164 EGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDF-------- 232 (444)
T ss_dssp CTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCCC--------
T ss_pred cCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhCCCCC--------
Confidence 4332 222345799999999999999999999999999999999999999965211 11111111111100
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||+.||++||++.|+++
T Consensus 233 -------~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 233 -------PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -------CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00001123456889999999999999999999986
No 108
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.3e-40 Score=369.76 Aligned_cols=259 Identities=22% Similarity=0.400 Sum_probs=211.4
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
+...++|++.+.||+|+||.||+|.+++++.||||+++... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34557888999999999999999999888999999997653 34578999999999999999999999986 56789999
Q ss_pred ecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 661 EFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 661 e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999999999854 335899999999999999999999 5669999999999999999999999999998764321
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
........+++.|+|||++..+.++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 339 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~------------ 403 (454)
T 1qcf_A 339 -YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYR------------ 403 (454)
T ss_dssp -HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTCC------------
T ss_pred -eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC------------
Confidence 111223446788999999998999999999999999999999 99999763221 11111111000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
...+..++..+.+++.+||+.+|++|||+.+|++.|+++..
T Consensus 404 -----~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 -----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 00112345679999999999999999999999999998764
No 109
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2.9e-39 Score=358.53 Aligned_cols=261 Identities=21% Similarity=0.268 Sum_probs=206.9
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
.++....++|++.++||+|+||+||+|+.. +++.||+|++++... .....+.+|..++..++||||+++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 334455689999999999999999999976 578999999976432 2223488899999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+..|+||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|.
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 9999999999999999999876666999999999999999999999 6669999999999999999999999999997
Q ss_pred ccCCCCCcccccccccccccCCccccc-----CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYAS-----DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG 808 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 808 (870)
...... ........||+.|+|||++. .+.++.++||||+||++|||++|+.||...... .....+..
T Consensus 224 ~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~------ 295 (437)
T 4aw2_A 224 KLMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMN------ 295 (437)
T ss_dssp ECCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHT------
T ss_pred hcccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhh------
Confidence 664332 22233457999999999986 567899999999999999999999999753211 11111110
Q ss_pred hhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 002892 809 LTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQ--RMCMTDVVV 857 (870)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~ 857 (870)
.......... ...++..+.+++.+|+..+|++ ||++.|+++
T Consensus 296 ------~~~~~~~p~~--~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 296 ------HKERFQFPTQ--VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp ------HHHHCCCCSS--CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ------ccccccCCcc--cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0000000000 0012346889999999988888 999999875
No 110
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=349.93 Aligned_cols=249 Identities=23% Similarity=0.308 Sum_probs=198.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 657 (870)
..++|++.+.||+|+||.||+|+.. +++.||+|++++.. ......+..|.++++.+ +||||+++++++...+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999965 68999999998653 33456678899999988 6999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++...+. +++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999999999986544 899999999999999999999 66799999999999999999999999999985422
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 177 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~------------ 241 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILNDEV------------ 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC------------
T ss_pred C--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC------------
Confidence 2 22334457999999999999888999999999999999999999999753211 11111111000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM------TDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~------~evl~ 857 (870)
. . + ...+..+.+++.+|++.+|++||++ .|+++
T Consensus 242 ~--~-p----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 V--Y-P----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp C--C-C----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred C--C-C----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0 0 0 0123468899999999999999998 66654
No 111
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-39 Score=347.88 Aligned_cols=247 Identities=25% Similarity=0.393 Sum_probs=201.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 347899999999999999999996 4789999999976432 223578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+ +|+|.+++...+ .+++.++..++.|++.|++||| +.||+||||||+||++++++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 789999887654 3899999999999999999999 556999999999999999999999999999876432
Q ss_pred CCcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
. ......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+....... ... +....
T Consensus 162 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~-i~~~~ 224 (336)
T 3h4j_B 162 N---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKK-VNSCV 224 (336)
T ss_dssp B---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCC-CCSSC
T ss_pred c---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHH-HHcCC
Confidence 2 2234569999999999988776 7899999999999999999999976322110 000 00000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.. .+...+..+.+++.+||+.||++|||+.|+++
T Consensus 225 ~~------~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 225 YV------MPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp CC------CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CC------CcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 00 01112456889999999999999999999975
No 112
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-39 Score=339.86 Aligned_cols=255 Identities=24% Similarity=0.397 Sum_probs=195.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhh----HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLE----RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|.+. ++.||||+++.... ...+.+.+|+++++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3568899999999999999999965 88999999875432 234678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC--------CCceEEeccc
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK--------NMTARVSDFG 730 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfg 730 (870)
||||+++++|.+++... .+++..++.++.|++.|++|||+.+..+|+||||||+||+++. ++.+||+|||
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 84 VMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 99999999999999643 4899999999999999999999543333999999999999986 7789999999
Q ss_pred cccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchh
Q 002892 731 ISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLT 810 (870)
Q Consensus 731 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 810 (870)
.+....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ...........
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~--- 233 (271)
T 3dtc_A 162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-AYGVAMNKLAL--- 233 (271)
T ss_dssp C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-HHHHHTSCCCC---
T ss_pred ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHhhhcCCCCC---
Confidence 998664322 2234689999999999999999999999999999999999999975321111 00000000000
Q ss_pred hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHh
Q 002892 811 EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKI 862 (870)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i 862 (870)
..+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 234 --------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 --------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 00112345789999999999999999999999999864
No 113
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=349.99 Aligned_cols=259 Identities=25% Similarity=0.442 Sum_probs=201.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcE----EEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTN----VAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999854 4554 4666664332 344577899999999999999999999998754 78
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999987777999999999999999999999 66699999999999999999999999999987754
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
...........+|+.|+|||++.+..++.++||||+||++|||++ |+.||......+ ....+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~--------- 238 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERL--------- 238 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC---------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCC---------
Confidence 444444444567889999999999999999999999999999999 999997632221 12211111000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..+..++..+.+++.+||+.+|++||++.|+++.|+++.+.
T Consensus 239 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 --------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 00112344688999999999999999999999999998743
No 114
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.1e-39 Score=344.26 Aligned_cols=270 Identities=23% Similarity=0.376 Sum_probs=211.2
Q ss_pred CCCCCeeccccceeEEEEEec-----CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeee--CCeeEE
Q 002892 587 FNECNLLGAGSFGSVYKGTLF-----DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCN--LDFKAL 658 (870)
Q Consensus 587 ~~~~~~lg~G~~g~v~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 658 (870)
|++.+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999988642 68899999997654 3446778999999999999999999999987 467899
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++...+ +++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999998654 899999999999999999999 666999999999999999999999999999877543
Q ss_pred CCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh--hcch
Q 002892 739 DDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE--VVDA 815 (870)
Q Consensus 739 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 815 (870)
... .......+|+.|+|||++.+..++.++||||+|+++|||++|+.||......... .......... .+..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLE-----LIGIAQGQMTVLRLTE 262 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH-----HHCSCCHHHHHHHHHH
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhh-----hhcccccchhHHHHHH
Confidence 322 2233445788899999999989999999999999999999999998653211000 0001110000 0000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.+... .....+..++..+.+++.+||+.+|++||++.|+++.|+++.+.+.
T Consensus 263 ~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 263 LLERG-ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcc-cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 00000 0111112345679999999999999999999999999999998875
No 115
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=349.40 Aligned_cols=277 Identities=25% Similarity=0.391 Sum_probs=215.4
Q ss_pred hcCCCCCCeeccccceeEEEEEe-----cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC--ee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-----FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD--FK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~ 656 (870)
.++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688999999999999999983 368899999998776666788999999999999999999999886543 78
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++++|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999987767999999999999999999999 6679999999999999999999999999998775
Q ss_pred CCCCcc-cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch-hhhcc
Q 002892 737 EDDDSV-TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGL-TEVVD 814 (870)
Q Consensus 737 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 814 (870)
...... ......++..|+|||++.+..++.++||||||+++|||++|..||...... ............. ...+.
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 433221 122345678899999999888999999999999999999999987642110 0000000000000 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
..+.... ....+..++..+.+++.+||+.+|++||++.||++.|+++++.+.
T Consensus 274 ~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 274 ELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHTTC-CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCC-CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 0111000 001112345679999999999999999999999999999998753
No 116
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.7e-39 Score=344.83 Aligned_cols=270 Identities=24% Similarity=0.379 Sum_probs=217.1
Q ss_pred chhHHHHhhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEe
Q 002892 576 SYLDIQQATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIF 647 (870)
Q Consensus 576 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~ 647 (870)
.........++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3344455668899999999999999999974 356889999997653 33456789999999999 799999999
Q ss_pred eeeeeCC-eeEEEEecCCCCCHHHHHhhcCC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccc
Q 002892 648 SSCCNLD-FKALVLEFMPNGSLEKWLYSHNY---------------FLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNL 711 (870)
Q Consensus 648 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dl 711 (870)
+++...+ ..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +++|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987654 58999999999999999986543 2789999999999999999999 667999999
Q ss_pred CCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCcc
Q 002892 712 KPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEM 790 (870)
Q Consensus 712 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~ 790 (870)
||+||+++.++.+||+|||++................||+.|+|||++.+..++.++||||+|+++|||++ |..||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987755444444445567899999999999999999999999999999998 99999764
Q ss_pred ccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 791 FTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..... ............ . +..++..+.+++.+||+.+|++||++.++++.|+++.+..
T Consensus 255 ~~~~~-~~~~~~~~~~~~------------~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDEE-FCRRLKEGTRMR------------A-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSHH-HHHHHHHTCCCC------------C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhHH-HHHHhccCccCC------------C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 32221 111111111000 0 0112346889999999999999999999999999998764
No 117
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=350.44 Aligned_cols=278 Identities=23% Similarity=0.327 Sum_probs=201.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee-----CCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN-----LDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~~~ 657 (870)
..++|++.+.||+|+||.||+|+. +++.||||++....... ...+.|+..+..++||||+++++.+.. ....+
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 457899999999999999999975 68999999997554322 222344444556899999999985532 33568
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CcEecccCCCceeeCCCCceEEec
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHST---------PVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~---------~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
+||||+++|+|.+++.... .++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 89 lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 9999999999999997655 589999999999999999999 55 899999999999999999999999
Q ss_pred cccccccCCCCC------cccccccccccccCCcccccC-------CCcCcccchHhHHHHHHHHHhCCCCCCccccc-c
Q 002892 729 FGISKLLGEDDD------SVTQTMTMATIGYMAPEYASD-------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTG-E 794 (870)
Q Consensus 729 fg~a~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslG~il~elltg~~p~~~~~~~-~ 794 (870)
||++..+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... +
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 999987643221 112234468999999999977 45677999999999999999998776432211 1
Q ss_pred chHHHHHHHhcCCchhhh---cchhh-hcccC-cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 795 MSLKHWIKLSLPRGLTEV---VDASL-VREVQ-PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
................++ ..... ..... .......++..+.+++.+||+.||++|||++|+++.|+++...|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 111000000011111110 00000 00000 001112356689999999999999999999999999999988764
No 118
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=343.48 Aligned_cols=244 Identities=21% Similarity=0.239 Sum_probs=193.5
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 660 (870)
++|++.+.||+|+||+||+|+.. +++.||||++.... .........|+..+.++ +||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 79999999986532 23334455556555555 8999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+ +++|.+++...+..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 77999999877777999999999999999999999 5669999999999999999999999999998764322
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... .....+. . .
T Consensus 212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~------------~-----~ 267 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLR------------Q-----G 267 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHT------------T-----T
T ss_pred --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHh------------c-----c
Confidence 2334468999999999876 7899999999999999999997765431 1111100 0 0
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+......++..+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 268 YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0001111223567899999999999999999999975
No 119
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4e-39 Score=337.83 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=206.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC--CeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL--DFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 658 (870)
..++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|++++++++||||+++++++... +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3467999999999999999999975 8899999997653 34456799999999999999999999999876 78899
Q ss_pred EEecCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeCCCCceEEecccccccc
Q 002892 659 VLEFMPNGSLEKWLYSHNY-FLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
||||+++|+|.+++..... .+++..++.++.|++.||+||| +++ ++||||||+||+++.++.++++|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999999986543 5899999999999999999999 677 999999999999999999999999987643
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCc---ccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISP---KCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
.. ....||+.|+|||++.+..++. ++||||+|+++|||++|+.||........ ............
T Consensus 164 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~---- 231 (271)
T 3kmu_A 164 QS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGLRPT---- 231 (271)
T ss_dssp SC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCCCCC----
T ss_pred cc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCCCCC----
Confidence 21 2245899999999998765544 79999999999999999999975322111 111111100000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
.+..++..+.+++..||+.+|++|||+.++++.|+++.+
T Consensus 232 -------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 -------------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 011234568999999999999999999999999999865
No 120
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.8e-39 Score=345.46 Aligned_cols=267 Identities=25% Similarity=0.444 Sum_probs=202.0
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeee
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCC 651 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 651 (870)
.++....++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 334445678899999999999999999854 34589999987542 444577899999999999999999999997
Q ss_pred eCC-----eeEEEEecCCCCCHHHHHhh-----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC
Q 002892 652 NLD-----FKALVLEFMPNGSLEKWLYS-----HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN 721 (870)
Q Consensus 652 ~~~-----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 721 (870)
..+ ..++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCC
Confidence 654 34999999999999999852 2355899999999999999999999 7779999999999999999
Q ss_pred CceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHH
Q 002892 722 MTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHW 800 (870)
Q Consensus 722 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 800 (870)
+.+||+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~ 261 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDY 261 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHH
Confidence 9999999999987654433333444567889999999999999999999999999999999 888887532211 1111
Q ss_pred HHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 801 IKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
....... ..+..++..+.+++.+||+.+|++||++.++++.|+++.+..
T Consensus 262 ~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 262 LLHGHRL-----------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHTTCCC-----------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHcCCCC-----------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1110000 001123457899999999999999999999999999998754
No 121
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-39 Score=339.73 Aligned_cols=262 Identities=24% Similarity=0.396 Sum_probs=212.4
Q ss_pred hcCCCCCC-eeccccceeEEEEEec---CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECN-LLGAGSFGSVYKGTLF---DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
.++|.+.+ .||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35566666 8999999999999853 57889999997643 34567789999999999999999999999 5567899
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++++|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999999877677999999999999999999999 667999999999999999999999999999877543
Q ss_pred CCcc-cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 739 DDSV-TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 739 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+......
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~~--------- 232 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRM--------- 232 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCCC---------
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCcC---------
Confidence 3221 2233456889999999988889999999999999999998 99999763221 111111110000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhhh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFLV 868 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~~ 868 (870)
..+..++..+.+++.+||+.+|++||++.++++.|+++......
T Consensus 233 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 233 --------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp --------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred --------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 00113355789999999999999999999999999999876543
No 122
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=345.23 Aligned_cols=248 Identities=24% Similarity=0.331 Sum_probs=201.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999965 68899999997653 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||++||+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999998654 4899999999999999999999 6679999999999999999999999999998764322
Q ss_pred CcccccccccccccCCcccccC---CCcCcccchHhHHHHHHHHHhCCCCCCccccccc-hHHHHHHHhcCCchhhhcch
Q 002892 740 DSVTQTMTMATIGYMAPEYASD---GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM-SLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 815 (870)
......||+.|+|||++.. ..++.++||||+||++|||++|+.||........ ............
T Consensus 170 ---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-------- 238 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVT-------- 238 (384)
T ss_dssp ---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC--------
T ss_pred ---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccC--------
Confidence 2344579999999999864 4589999999999999999999999975322111 111111100000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCC-HHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMC-MTDVV 856 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-~~evl 856 (870)
. +..++..+.+++.+||+.+|++||+ +.+|.
T Consensus 239 -----~-----p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 239 -----Y-----PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp -----C-----CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred -----C-----CCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 0 0122456889999999999999998 66654
No 123
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=354.89 Aligned_cols=260 Identities=24% Similarity=0.412 Sum_probs=198.6
Q ss_pred CCCCCCeeccccceeEEEEEec--CC--cEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeee-CCeeEEE
Q 002892 586 GFNECNLLGAGSFGSVYKGTLF--DG--TNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCN-LDFKALV 659 (870)
Q Consensus 586 ~~~~~~~lg~G~~g~v~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~~lv 659 (870)
.|++.+.||+|+||.||+|++. ++ ..||+|.++... ....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999853 22 368999986533 3456789999999999999999999998754 5678999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++.......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999977777899999999999999999999 6679999999999999999999999999998664322
Q ss_pred Cc--ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 740 DS--VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 740 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.. .......+|+.|+|||++.+..++.++||||||+++|||++ |..||......+ .........
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~----------- 313 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGR----------- 313 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTC-----------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCC-----------
Confidence 21 12233457889999999999999999999999999999999 667776532221 111111100
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
....+..++..+.+++.+||+.+|++||++.|+++.|+++...+.
T Consensus 314 ------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 314 ------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 000111245578999999999999999999999999999987654
No 124
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=349.79 Aligned_cols=246 Identities=20% Similarity=0.305 Sum_probs=198.7
Q ss_pred CCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecCCCCCH
Q 002892 590 CNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFMPNGSL 668 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g~L 668 (870)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999864 6899999999876656667899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee--CCCCceEEeccccccccCCCCCcccccc
Q 002892 669 EKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL--DKNMTARVSDFGISKLLGEDDDSVTQTM 746 (870)
Q Consensus 669 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 746 (870)
.+++......+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++..+.... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cccc
Confidence 9999877667999999999999999999999 6669999999999999 567899999999998774332 2233
Q ss_pred cccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchH
Q 002892 747 TMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYA 826 (870)
Q Consensus 747 ~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (870)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+....++.. ...
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~---------------~~~ 311 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWDLE---------------DEE 311 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCCSC---------------SGG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCC---------------hhh
Confidence 4689999999999999999999999999999999999999976321 111222221111100 000
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 827 KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 827 ~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...++..+.+++.+||+.+|++||++.|+++
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1123457899999999999999999999987
No 125
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.8e-39 Score=338.93 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=207.7
Q ss_pred hhcCCCCCCeeccccceeEEEEEecC----CcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFD----GTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
..++|++.+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 45789999999999999999998542 3459999987653 3456778999999999999999999999865 4568
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877767999999999999999999999 66799999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ............
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~~-------- 234 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRLP-------- 234 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCCC--------
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCCC--------
Confidence 322 22233457889999999998899999999999999999998 999997532221 111111110000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.+..++..+.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 235 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 235 ---------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 00123456889999999999999999999999999987653
No 126
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-39 Score=346.27 Aligned_cols=262 Identities=27% Similarity=0.447 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccccceeEEEEEecC-----CcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFD-----GTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
.++|+..+.||+|+||.||+|.... +..||+|+++... ......+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999998542 2359999997643 344567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999877667999999999999999999999 56799999999999999999999999999987643
Q ss_pred CCCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 738 DDDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 738 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~--------- 268 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFR--------- 268 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC---------
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCCc---------
Confidence 3221 12223346788999999999999999999999999999999 99999653221 11111110000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
...+..++..+.+++.+||+.+|++||++.++++.|+++.+...
T Consensus 269 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 --------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00011234578999999999999999999999999999887543
No 127
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.3e-39 Score=350.72 Aligned_cols=267 Identities=22% Similarity=0.382 Sum_probs=214.8
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec------CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeee
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSC 650 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 650 (870)
.+.....++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556788999999999999999999854 36789999997543 34456788999999999999999999999
Q ss_pred eeCCeeEEEEecCCCCCHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC
Q 002892 651 CNLDFKALVLEFMPNGSLEKWLYSHN---------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN 721 (870)
Q Consensus 651 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~ 721 (870)
...+..++||||+++|+|.+++...+ ..+++..++.++.|++.||+||| ++||+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999998532 34789999999999999999999 6679999999999999999
Q ss_pred CceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHH
Q 002892 722 MTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHW 800 (870)
Q Consensus 722 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~ 800 (870)
+.+||+|||++................+|+.|+|||++.+..++.++||||+|+++|||++ |..||...... .....
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~ 252 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRF 252 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHHH
Confidence 9999999999986643333333344457889999999998899999999999999999999 88888753211 11111
Q ss_pred HHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 801 IKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
+.. .. ... .+..++..+.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 253 ~~~---~~--------~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~ 301 (322)
T 1p4o_A 253 VME---GG--------LLD------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301 (322)
T ss_dssp HHT---TC--------CCC------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HHc---CC--------cCC------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence 110 00 000 01123456889999999999999999999999999876543
No 128
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=338.28 Aligned_cols=245 Identities=25% Similarity=0.323 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467899999999999999999965 78999999997653 23456788899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.+|.+||+|||++......
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999998654 3899999999999999999999 777999999999999999999999999999865322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.....
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~-------------- 220 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-MKTYEKILNAEL-------------- 220 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHCCC--------------
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC--------------
Confidence 2235689999999999999999999999999999999999999975311 111111111000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 857 (870)
... ...+..+.+++.+|++.+|++|| ++.|+++
T Consensus 221 ~~p-----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 RFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CCC-----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCC-----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 000 01234688999999999999999 8888864
No 129
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5.5e-39 Score=341.73 Aligned_cols=262 Identities=24% Similarity=0.400 Sum_probs=206.3
Q ss_pred hcCCCCCCeeccccceeEEEEEecC----CcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeee-eCCeeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFD----GTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCC-NLDFKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~~~ 657 (870)
...|++.+.||+|+||.||+|+..+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3468888999999999999998542 2358999886533 345577899999999999999999999864 566889
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++......+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877777899999999999999999999 66799999999999999999999999999987643
Q ss_pred CCC--cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhC-CCCCCccccccchHHHHHHHhcCCchhhhcc
Q 002892 738 DDD--SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTR-KKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 738 ~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (870)
... ........+|+.|+|||.+.+..++.++||||+|+++|||++| .+||...... . ..........
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~-------- 250 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-D-ITVYLLQGRR-------- 250 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-T-HHHHHHTTCC--------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-H-HHHHHhcCCC--------
Confidence 221 1223345678899999999999999999999999999999995 5555442211 1 1111111000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
...+..++..+.+++.+||+.+|++||++.|+++.|+++.+.+.
T Consensus 251 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 251 ---------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00011234568999999999999999999999999999988664
No 130
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.6e-39 Score=340.74 Aligned_cols=262 Identities=22% Similarity=0.400 Sum_probs=211.7
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.....++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|++++++++||||+++++++. .+..++|
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 85 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence 344557899999999999999999998888899999987543 23467899999999999999999999886 4568999
Q ss_pred EecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 660 LEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
|||+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||.+......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 99999999999998542 35899999999999999999999 667999999999999999999999999999876433
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.. .......+++.|+|||++.++.++.++||||+|+++|||++ |+.||...... .....+......
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~---------- 229 (279)
T 1qpc_A 163 EY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRM---------- 229 (279)
T ss_dssp CE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC----------
T ss_pred cc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccCC----------
Confidence 21 22233456789999999998899999999999999999999 89998753221 111111110000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+..++..+.+++..||+.+|++||+++++++.|+++....
T Consensus 230 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 230 -------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 001123457899999999999999999999999999987653
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=347.51 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=197.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCC--CceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRH--RNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++......++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 346799999999999999999998889999999987543 3445778999999999976 999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||| +.+++|.+++...+ .+++.++..++.|++.||+||| +++|+||||||+||+++ ++.+||+|||++......
T Consensus 87 v~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 999 56889999998754 4899999999999999999999 56699999999999996 678999999999877544
Q ss_pred CCcccccccccccccCCcccccC-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 002892 739 DDSVTQTMTMATIGYMAPEYASD-----------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPR 807 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 807 (870)
..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~------ 234 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------ 234 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH------
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh------
Confidence 43334445679999999999864 6788999999999999999999999975332211111111
Q ss_pred chhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 808 GLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+......... .++..+.+++..||+.||++|||+.|+++.
T Consensus 235 ------~~~~~~~~~~-----~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 235 ------DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ------CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------cCCcccCCcc-----cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1110000000 112468899999999999999999999764
No 132
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-38 Score=349.36 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=197.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.++||+|+||.||+|+.. +++.||+|++++.. ......+..|..++.++ +||||+++++++...+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999965 68899999998653 22334578899999887 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999998654 3899999999999999999999 667999999999999999999999999999853222
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+.... .....+......
T Consensus 207 --~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~--------~~~~~~~~~i~~ 276 (396)
T 4dc2_A 207 --GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVILE 276 (396)
T ss_dssp --TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC--------------CCHHHHHHHHHH
T ss_pred --CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch--------hhHHHHHHHHhc
Confidence 2223446799999999999999999999999999999999999999965321110000 000000000000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM 852 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~ 852 (870)
.... .+...+..+.+++.+||+.||++||++
T Consensus 277 ~~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 277 KQIR---IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCC---CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cccC---CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 0000 001134568899999999999999996
No 133
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.8e-39 Score=367.23 Aligned_cols=258 Identities=24% Similarity=0.385 Sum_probs=212.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|.+. +++.||||+++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3467888999999999999999976 488999999976533 35778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
|+++|+|.+++... +..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 99999999999854 455899999999999999999999 6669999999999999999999999999998764322
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
........+++.|+|||++..+.++.++|||||||++|||++ |..||...... .+...+.....
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~------------- 437 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR------------- 437 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC-------------
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-------------
Confidence 222233456789999999998999999999999999999999 89998763221 11111111100
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
...+..++..+.+++.+||+.+|++||++.+|++.|+++.+
T Consensus 438 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 ----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred ----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 00112345678999999999999999999999999998754
No 134
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-39 Score=342.00 Aligned_cols=264 Identities=23% Similarity=0.376 Sum_probs=216.4
Q ss_pred HHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 579 DIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 579 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
+.....++|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 34456678999999999999999999976 58899999997553 34577889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 658 LVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
+||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+....
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999999853 455899999999999999999999 5569999999999999999999999999998775
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......+++.|+|||++.+..++.++||||+|+++|+|++ |..||...... ............
T Consensus 163 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~-------- 231 (288)
T 3kfa_A 163 GDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM-------- 231 (288)
T ss_dssp SSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCC--------
T ss_pred CCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCCC--------
Confidence 4332 23334457889999999998999999999999999999999 99998753221 111111111000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
. .+..++..+.+++..|++.+|++||++.++++.|+++.+..
T Consensus 232 ----~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 ----E-----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ----C-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----C-----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 01123457899999999999999999999999999887654
No 135
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=347.65 Aligned_cols=252 Identities=22% Similarity=0.297 Sum_probs=190.1
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
...++|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 34578999999999999999999976 58899999997653 3356888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~~~~~ 737 (870)
||+++|+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++.....
T Consensus 128 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 9999999999998654 3899999999999999999999 567999999999999975 88999999999986643
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||............+....... .
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~-----~---- 271 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF-----I---- 271 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC-----C----
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc-----C----
Confidence 21 22345689999999999999999999999999999999999999975322221111111110000 0
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
......++..+.+++.+||+.||++||++.|+++
T Consensus 272 ------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 ------SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ------CchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000123456889999999999999999999986
No 136
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=353.69 Aligned_cols=260 Identities=23% Similarity=0.318 Sum_probs=206.2
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
.+.....++|++.+.||+|+||.||+|+.+ +|+.||+|++++.. ......+.+|..++.+++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344455789999999999999999999975 79999999997643 22334578899999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+..|+||||+++|+|.+++...+..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~ 210 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCL 210 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhe
Confidence 9999999999999999999876666999999999999999999999 6669999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCccccc-------CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYAS-------DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLP 806 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 806 (870)
....... .......||+.|+|||++. .+.++.++|||||||++|||++|+.||...... .....+....
T Consensus 211 ~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~-- 286 (412)
T 2vd5_A 211 KLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVHYK-- 286 (412)
T ss_dssp ECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHH--
T ss_pred eccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhcc--
Confidence 7643322 2233457999999999987 457899999999999999999999999753211 1111111100
Q ss_pred CchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 002892 807 RGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQR---MCMTDVVV 857 (870)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---Ps~~evl~ 857 (870)
..... + .....++..+.+++.+||. +|++| |++.|+++
T Consensus 287 ----------~~~~~-p-~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 287 ----------EHLSL-P-LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp ----------HHCCC-C-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred ----------cCcCC-C-ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 00000 0 0011234578999999999 99998 58888864
No 137
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7e-39 Score=345.53 Aligned_cols=250 Identities=26% Similarity=0.333 Sum_probs=201.9
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCe
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 655 (870)
....++|++.+.||+|+||.||+|+.+ +|+.||+|++++.. ......+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445688999999999999999999975 68999999997653 23456678899999877 89999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.|+||||++||+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999998654 3899999999999999999999 667999999999999999999999999999754
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+....+.
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~~~-------- 236 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDNPF-------- 236 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCCC--------
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCCCC--------
Confidence 3221 123445799999999999999999999999999999999999999975321 1111111100000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMT-DVV 856 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~-evl 856 (870)
. +..++..+.+++.+||+.+|++||++. +++
T Consensus 237 -----~-----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 237 -----Y-----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----C-----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----C-----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 001234688999999999999999997 554
No 138
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=341.97 Aligned_cols=249 Identities=23% Similarity=0.288 Sum_probs=194.7
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh--------------------------HHHHHHHHHHHHHH
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE--------------------------RAFRSFESECEVLR 636 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 636 (870)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 478999999999999999999864 689999999875431 12356889999999
Q ss_pred hcCCCceeEEeeeeee--CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCC
Q 002892 637 NVRHRNLIKIFSSCCN--LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPN 714 (870)
Q Consensus 637 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~ 714 (870)
+++||||+++++++.. .+..++||||+++++|.++... ..+++..+..++.|++.||+||| +++|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 5688999999999999886543 34899999999999999999999 566999999999
Q ss_pred ceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCC---cCcccchHhHHHHHHHHHhCCCCCCccc
Q 002892 715 NILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGI---ISPKCDVYSYGVLLMETFTRKKPTDEMF 791 (870)
Q Consensus 715 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslG~il~elltg~~p~~~~~ 791 (870)
||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987643322 223457899999999997665 4788999999999999999999997521
Q ss_pred cccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 792 TGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. ......+...... .. ....++..+.+++.+||+.||++||++.|+++
T Consensus 245 ~--~~~~~~~~~~~~~------------~~----~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I--MCLHSKIKSQALE------------FP----DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H--HHHHHHHHHCCCC------------CC----SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H--HHHHHHHhcccCC------------CC----CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 1111111100000 00 00122456889999999999999999999875
No 139
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.1e-38 Score=339.20 Aligned_cols=263 Identities=23% Similarity=0.327 Sum_probs=201.9
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeech---hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQ---LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|++++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999996 47899999998753 244567789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYS---HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
|||+++++|.+++.. ....+++..++.++.|++.||+||| +++++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999874 3456899999999999999999999 6679999999999999999999999999998664
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.............+... ..
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~------- 255 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC---DY------- 255 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT---CS-------
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc---cC-------
Confidence 3221 22334689999999999999999999999999999999999999975322211111111100 00
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
+......++..+.+++.+||+.||++||++.+|++.|+++.+...
T Consensus 256 ------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 256 ------PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp ------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ------CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 000011234578899999999999999999999999999987653
No 140
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3e-39 Score=345.67 Aligned_cols=260 Identities=21% Similarity=0.361 Sum_probs=197.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe---
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF--- 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 655 (870)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 457899999999999999999996 578999999997643 3445678999999999999999999999876543
Q ss_pred -eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 656 -KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 656 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
.|+||||+++++|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 399999999999999998654 4899999999999999999999 56699999999999999999999999999987
Q ss_pred cCCCCCc-ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhc
Q 002892 735 LGEDDDS-VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVV 813 (870)
Q Consensus 735 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (870)
....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ........ +.
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~-~~------ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVRED-PI------ 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCC-CC------
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCC-CC------
Confidence 6443222 223345689999999999999999999999999999999999999975322111 11110000 00
Q ss_pred chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHHh
Q 002892 814 DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVV-VKLQKI 862 (870)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl-~~L~~i 862 (870)
........++..+.+++.+||+.||++||++.+++ +.+.++
T Consensus 238 --------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 238 --------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp --------CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred --------CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00001112355788999999999999999666654 455444
No 141
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3e-39 Score=355.65 Aligned_cols=259 Identities=20% Similarity=0.270 Sum_probs=205.7
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
.++....++|++.+.||+|+||.||+|+.. +++.||+|++++... .....+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344455789999999999999999999965 689999999976431 2234478899999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+..|+||||++||+|.+++...+ +++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999997643 899999999999999999999 6679999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCCC----cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDGI----ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGL 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 809 (870)
...... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ......+...
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~------ 288 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNH------ 288 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHTH------
T ss_pred eeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-hhHHHHHHhc------
Confidence 764332 22233567999999999997655 78999999999999999999999975211 1111111110
Q ss_pred hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 002892 810 TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQ--RMCMTDVVVK 858 (870)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--RPs~~evl~~ 858 (870)
....... .....+..+.+++.+|+..+|++ ||++.||++.
T Consensus 289 ------~~~~~~p---~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 ------KNSLTFP---DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ------HHHCCCC---TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ------cccccCC---CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0000000 00012356889999999999998 9999999753
No 142
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.4e-39 Score=340.18 Aligned_cols=253 Identities=22% Similarity=0.354 Sum_probs=205.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CC-------cEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DG-------TNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
.++|++.+.||+|+||.||+|... ++ ..||+|++........+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 467889999999999999999854 33 4799999987766777889999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc--------eEEe
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT--------ARVS 727 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--------~kl~ 727 (870)
.++||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999987766999999999999999999999 666999999999999998887 9999
Q ss_pred ccccccccCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 002892 728 DFGISKLLGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLP 806 (870)
Q Consensus 728 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 806 (870)
|||.+..... .....|++.|+|||++.+ ..++.++||||+|+++|||++|+.|+.......... ..... .
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~~~--~ 234 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL-QFYED--R 234 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHT--T
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH-HHhhc--c
Confidence 9999875421 123357889999999987 678999999999999999999665543321211111 11110 0
Q ss_pred CchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 807 RGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
... .. .++..+.+++.+||+.||++||++.++++.|+++...
T Consensus 235 ~~~------------~~-----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 235 HQL------------PA-----PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp CCC------------CC-----CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred CCC------------CC-----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 000 00 0123578899999999999999999999999987543
No 143
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=338.62 Aligned_cols=261 Identities=22% Similarity=0.353 Sum_probs=207.3
Q ss_pred CCCCCCeeccccceeEEEEEec-CC---cEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee-EEE
Q 002892 586 GFNECNLLGAGSFGSVYKGTLF-DG---TNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK-ALV 659 (870)
Q Consensus 586 ~~~~~~~lg~G~~g~v~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~lv 659 (870)
.|+..+.||+|+||.||+|.+. ++ ..||+|++.... ....+.+.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3555689999999999999853 22 379999987543 34567889999999999999999999999766554 999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+.+|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999987777999999999999999999999 5669999999999999999999999999998664322
Q ss_pred C--cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 740 D--SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 740 ~--~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
. ........+++.|+|||.+.+..++.++||||+|+++|+|++|+.|+...... ..............
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~--------- 248 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLP--------- 248 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCC---------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCC---------
Confidence 1 11223346788999999999999999999999999999999966665432222 11222111111000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.+..++..+.+++.+||+.+|++|||+.++++.|+++.+.+.
T Consensus 249 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 249 --------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred --------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 011234568899999999999999999999999999988764
No 144
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-38 Score=350.30 Aligned_cols=272 Identities=18% Similarity=0.237 Sum_probs=205.5
Q ss_pred hhcCCCCCCeeccc--cceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 583 ATDGFNECNLLGAG--SFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G--~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
..++|++.+.||+| +||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45689999999999 99999999976 79999999997654 345577889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 658 LVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
+||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999854 345899999999999999999999 6669999999999999999999999999886542
Q ss_pred CCCC-----cccccccccccccCCcccccC--CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc-
Q 002892 737 EDDD-----SVTQTMTMATIGYMAPEYASD--GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG- 808 (870)
Q Consensus 737 ~~~~-----~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 808 (870)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+...... .........+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 258 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLL 258 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC---------
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCccc
Confidence 2111 111223468899999999987 5789999999999999999999999976432221 111111111000
Q ss_pred ----------------------hhhhcchhhh----cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 809 ----------------------LTEVVDASLV----REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 809 ----------------------~~~~~~~~~~----~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
..+....... ...........++..+.+++.+||+.||++|||+.|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0000000000 0000001112345678999999999999999999999853
No 145
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.9e-38 Score=349.39 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=197.4
Q ss_pred cCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcC--CCceeEEeeeeeeCCeeEEEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVR--HRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 660 (870)
+.|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999997543 445678899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
| +.+++|.+++.... .+++.++..++.||+.||+||| +++|+||||||+||+++ ++.+||+|||++..+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999998765 4899999999999999999999 67799999999999995 58999999999987754433
Q ss_pred cccccccccccccCCcccccC-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCch
Q 002892 741 SVTQTMTMATIGYMAPEYASD-----------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGL 809 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 809 (870)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+....
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~-------- 281 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII-------- 281 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH--------
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHh--------
Confidence 333445679999999999865 4688999999999999999999999975322211111111
Q ss_pred hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 810 TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+......... .++..+.+++.+||+.||++||++.|+++.
T Consensus 282 ----~~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 282 ----DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----CccccCCCCc-----cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1110000000 113468899999999999999999999753
No 146
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-38 Score=343.10 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=197.8
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC-------
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD------- 654 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------- 654 (870)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467889999999999999999976 79999999997543 345577999999999999999999999986543
Q ss_pred --------------------------------------------------eeEEEEecCCCCCHHHHHhhcC--CCCCHH
Q 002892 655 --------------------------------------------------FKALVLEFMPNGSLEKWLYSHN--YFLDML 682 (870)
Q Consensus 655 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~--~~~~~~ 682 (870)
..++||||+++++|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3789999999999999998543 335677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc----------ccccccccccc
Q 002892 683 ERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS----------VTQTMTMATIG 752 (870)
Q Consensus 683 ~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~g~~~ 752 (870)
.++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 88999999999999999 667999999999999999999999999999877543221 12234569999
Q ss_pred cCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHH
Q 002892 753 YMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLL 832 (870)
Q Consensus 753 y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 832 (870)
|+|||++.+..++.++||||+|+++|||++|..|+... ...... . ..............
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~------------~--~~~~~~~~~~~~~~ 300 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITD------------V--RNLKFPLLFTQKYP 300 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHH------------H--HTTCCCHHHHHHCH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHH------------h--hccCCCcccccCCh
Confidence 99999999999999999999999999999987764321 000000 0 00011112233455
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 833 RIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 833 ~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+.+++.+||+.||++||++.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 6789999999999999999999986
No 147
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.1e-39 Score=363.08 Aligned_cols=257 Identities=25% Similarity=0.429 Sum_probs=204.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
..++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 4567888999999999999999988888899999976532 34678999999999999999999999876 678999999
Q ss_pred CCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 663 MPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 663 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
+++|+|.+++... +..+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||++........
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-
Confidence 9999999999853 345899999999999999999999 66699999999999999999999999999987643221
Q ss_pred ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 742 VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......+++.|+|||++.++.++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~-------------- 399 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR-------------- 399 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC--------------
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------------
Confidence 22233457789999999998999999999999999999999 999987532211 1111110000
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
...+..++..+.+++.+||+.+|++|||+.+|++.|+++..
T Consensus 400 ---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 400 ---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 00112345678999999999999999999999999998754
No 148
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.7e-38 Score=343.67 Aligned_cols=266 Identities=22% Similarity=0.375 Sum_probs=214.7
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEecC-C-----cEEEEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeee
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLFD-G-----TNVAIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCN 652 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 652 (870)
....++|++.+.||+|+||.||+|.... + ..||+|++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445789999999999999999998642 2 479999997653 34457789999999999 89999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhc-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSH-------------NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD 719 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 719 (870)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 99999999999999999999843 234799999999999999999999 56799999999999999
Q ss_pred CCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHH
Q 002892 720 KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLK 798 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~ 798 (870)
.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |..||....... ...
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHH
Confidence 999999999999987644433333444567889999999998899999999999999999999 889987632221 122
Q ss_pred HHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 799 HWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
.......... .+..++..+.+++..||+.+|++||++.+|++.|+++.+...
T Consensus 278 ~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 278 KLVKDGYQMA-----------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp HHHHHTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCC-----------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 2221111100 001124568899999999999999999999999999887653
No 149
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3e-38 Score=341.48 Aligned_cols=252 Identities=20% Similarity=0.271 Sum_probs=199.1
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.+.||+|+||.||+|+.. +++.||+|++++.. ....+.+.+|..+++++ +||||+++++++...+..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357899999999999999999965 68999999997653 34456788999999988 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999998654 4899999999999999999999 667999999999999999999999999999854222
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||........... .....+......
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~--------~~~~~~~~~i~~ 233 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ--------NTEDYLFQVILE 233 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC---------------CHHHHHHHHHH
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc--------ccHHHHHHHHHc
Confidence 1 223345799999999999999999999999999999999999999975322110000 000000000000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM 852 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~ 852 (870)
.... . +...+..+.+++.+||+.||++||++
T Consensus 234 ~~~~--~-p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 234 KQIR--I-PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCCC--C-CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCC--C-CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0000 0 01234568899999999999999996
No 150
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.7e-40 Score=351.01 Aligned_cols=269 Identities=22% Similarity=0.369 Sum_probs=194.4
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHh--cCCCceeEEeeeeeeCC----eeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRN--VRHRNLIKIFSSCCNLD----FKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~----~~~ 657 (870)
.++|++.+.||+|+||.||+|++. ++.||||++.... ...+..|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 467999999999999999999864 8999999987543 2456667888777 79999999999998766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecccCCCceeeCCCCceEEeccccc
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-----HSTPVVHCNLKPNNILLDKNMTARVSDFGIS 732 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 732 (870)
+||||+++|+|.+++.... +++..++.++.|++.|++|||.. ++++|+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999999997653 78889999999999999999932 2466999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccccccCCcccccCC------CcCcccchHhHHHHHHHHHhC----------CCCCCcccccc
Q 002892 733 KLLGEDDDSV--TQTMTMATIGYMAPEYASDG------IISPKCDVYSYGVLLMETFTR----------KKPTDEMFTGE 794 (870)
Q Consensus 733 ~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg----------~~p~~~~~~~~ 794 (870)
.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664333221 12334689999999999776 445689999999999999999 55554432221
Q ss_pred chHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 795 MSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.....+ ...+............+...+++..+.+++.+||+.||++|||+.+|++.|+++.+..
T Consensus 236 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 236 PSVEEM--------RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CCCC-C--------HHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred ccHHHH--------HHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 111111 1111222222223333444467788999999999999999999999999999987654
No 151
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.5e-38 Score=355.38 Aligned_cols=323 Identities=21% Similarity=0.210 Sum_probs=269.8
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
-+.++.++++++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 468999999998 5787663 6899999999999988889999999999999999999988899999999999999999
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCC
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRP 176 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 176 (870)
|++++..+..|.++++|++|+|++|++++..+..+..+++|++|++++|++++..+..|.++++|++|++++|++++.
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 167 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI-- 167 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC--
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc--
Confidence 999966566789999999999999999988899999999999999999999988888888888888888888877632
Q ss_pred CcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccc
Q 002892 177 STMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSF 256 (870)
Q Consensus 177 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 256 (870)
.+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|....
T Consensus 168 -----------------------~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~---------- 214 (477)
T 2id5_A 168 -----------------------PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD---------- 214 (477)
T ss_dssp -----------------------CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCC----------
T ss_pred -----------------------ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcccc----------
Confidence 23345666777777777777776666667777777777666654332
Q ss_pred ccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhch
Q 002892 257 LSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRL 336 (870)
Q Consensus 257 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 336 (870)
.+|.......+|+.|++++|++.+ +|.
T Consensus 215 -----------------------------------------------~~~~~~~~~~~L~~L~l~~n~l~~-~~~----- 241 (477)
T 2id5_A 215 -----------------------------------------------TMTPNCLYGLNLTSLSITHCNLTA-VPY----- 241 (477)
T ss_dssp -----------------------------------------------EECTTTTTTCCCSEEEEESSCCCS-CCH-----
T ss_pred -----------------------------------------------ccCcccccCccccEEECcCCcccc-cCH-----
Confidence 111122223367777777777763 221
Q ss_pred hhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEcc
Q 002892 337 QQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLS 416 (870)
Q Consensus 337 ~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 416 (870)
..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+.|+|+
T Consensus 242 -----------------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 242 -----------------LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp -----------------HHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred -----------------HHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 245667899999999999999999999999999999999999999889999999999999999
Q ss_pred CCccCCcccccccCCCCCCEEEcCCCcccCc
Q 002892 417 RNQLSGNIPITIGGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 417 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 447 (870)
+|+|++..+..|..+++|+.|+|++|.+...
T Consensus 305 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 305 GNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp SSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9999988888999999999999999999854
No 152
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.9e-38 Score=335.97 Aligned_cols=265 Identities=18% Similarity=0.205 Sum_probs=206.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeee-eeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSC-CNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... ..+.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 57899999987654322 4578899999999987766655554 6677889999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 737 (870)
||+ +++|.+++......+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 99999999876667999999999999999999999 6669999999999999 7889999999999987654
Q ss_pred CCCc-----ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchh
Q 002892 738 DDDS-----VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE--MSLKHWIKLSLPRGLT 810 (870)
Q Consensus 738 ~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~ 810 (870)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...........+...
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 239 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI- 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh-
Confidence 3321 12234568999999999999999999999999999999999999997643221 111111111110000
Q ss_pred hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 811 EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
......++..+.+++..||+.+|++||++++|++.|+++.+...
T Consensus 240 -------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 240 -------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred -------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00001224578999999999999999999999999999988654
No 153
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=6e-38 Score=340.87 Aligned_cols=273 Identities=22% Similarity=0.361 Sum_probs=214.7
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHh--cCCCceeEEeeeeeeCC----
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRN--VRHRNLIKIFSSCCNLD---- 654 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~---- 654 (870)
....++|++.+.||+|+||.||+|+. +++.||||++.... ...+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 34557899999999999999999997 58999999997543 3456778888887 78999999999998765
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEecccCCCceeeCCCCceEEecc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-----HSTPVVHCNLKPNNILLDKNMTARVSDF 729 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Df 729 (870)
..++||||+++|+|.+++...+ +++..++.++.|++.||+|||.. ++++|+||||||+||+++.++.+||+||
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 191 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCC
T ss_pred eeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEEC
Confidence 7899999999999999998653 89999999999999999999932 1456999999999999999999999999
Q ss_pred ccccccCCCCCcc--cccccccccccCCcccccCC------CcCcccchHhHHHHHHHHHhC----------CCCCCccc
Q 002892 730 GISKLLGEDDDSV--TQTMTMATIGYMAPEYASDG------IISPKCDVYSYGVLLMETFTR----------KKPTDEMF 791 (870)
Q Consensus 730 g~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~il~elltg----------~~p~~~~~ 791 (870)
|++.......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..||....
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~ 271 (342)
T 1b6c_B 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271 (342)
T ss_dssp TTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence 9998764433221 22345689999999999775 334689999999999999999 67876644
Q ss_pred cccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 792 TGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
........+....... .........+...+++..+.+++.+||+.+|++||++.+|++.|+++.+...
T Consensus 272 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 272 PSDPSVEEMRKVVCEQ--------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp CSSCCHHHHHHHHTTS--------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred cCcccHHHHHHHHHHH--------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 4333333332221111 1111112222334667789999999999999999999999999999987653
No 154
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=347.17 Aligned_cols=257 Identities=17% Similarity=0.152 Sum_probs=207.7
Q ss_pred HHhhcCCCCCCeeccccceeEEEEE------ecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC---CCceeEEeeeee
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGT------LFDGTNVAIKVFNLQLERAFRSFESECEVLRNVR---HRNLIKIFSSCC 651 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 651 (870)
....++|++.+.||+|+||+||+|. ..+++.||+|++..... ..+..|++++++++ |+||+.+++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3445789999999999999999994 44689999999976543 35667777777776 999999999999
Q ss_pred eCCeeEEEEecCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC-------
Q 002892 652 NLDFKALVLEFMPNGSLEKWLYS----HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK------- 720 (870)
Q Consensus 652 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~------- 720 (870)
..+..++||||+++|+|.+++.. ....+++..++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999984 3456999999999999999999999 677999999999999998
Q ss_pred ----CCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccch
Q 002892 721 ----NMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMS 796 (870)
Q Consensus 721 ----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~ 796 (870)
++.+||+|||+|..+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 8999999999997654333344445567999999999999999999999999999999999999998653222110
Q ss_pred HHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHHHHHhHhHhh
Q 002892 797 LKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQR-MCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R-Ps~~evl~~L~~i~~~~~ 867 (870)
....... . .....+.+++..|+..+|.+| |++.++.+.|+++.+...
T Consensus 295 ----------------~~~~~~~-~-------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 295 ----------------PEGLFRR-L-------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp ----------------ECSCCTT-C-------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ----------------echhccc-c-------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 0000000 0 013357789999999999998 578888999988876643
No 155
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3e-38 Score=332.13 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=205.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 4567999999999999999999965 578999999987666667789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccCCC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 738 (870)
|+++++|.+++...+. +++..+..++.|++.|++||| +++|+||||||+||++ +.++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999886543 899999999999999999999 6679999999999999 78899999999999876433
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
. ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||......+ ....+.......
T Consensus 163 ~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~----------- 226 (277)
T 3f3z_A 163 K---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGTFTF----------- 226 (277)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCC-----------
T ss_pred c---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC-----------
Confidence 2 22344689999999998654 8999999999999999999999997632211 111111100000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+|++.+|++||++.++++
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 ----PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ----CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00011123557899999999999999999999975
No 156
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.2e-38 Score=341.70 Aligned_cols=245 Identities=22% Similarity=0.236 Sum_probs=203.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+.. ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467999999999999999999965 68999999997653 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++...+. +++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999999986543 899999999999999999999 667999999999999999999999999999876432
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.....+
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~~------------- 256 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-IQIYEKIVSGKVR------------- 256 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCC-------------
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-HHHHHHHHcCCCC-------------
Confidence 2234689999999999999999999999999999999999999975311 1111111110000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMC-----MTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~ 857 (870)
. +..++..+.+++.+||+.||++||+ +.||++
T Consensus 257 -~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 -F-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -C-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -C-----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0 0112456889999999999999998 787764
No 157
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.4e-38 Score=334.48 Aligned_cols=265 Identities=18% Similarity=0.205 Sum_probs=210.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeee-eeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSC-CNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|+. .+++.||+|++...... +.+.+|++++++++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 357899999999999999999996 57899999998755432 4578899999999988765555544 6677889999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 737 (870)
||+ +++|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 99999999866667999999999999999999999 6679999999999999 4789999999999987654
Q ss_pred CCCcc-----cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchh
Q 002892 738 DDDSV-----TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE--MSLKHWIKLSLPRGLT 810 (870)
Q Consensus 738 ~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~ 810 (870)
..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .....+.....+...
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~- 239 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI- 239 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-
Confidence 33211 1234568999999999999999999999999999999999999998643221 111111111110000
Q ss_pred hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 811 EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
......++..+.+++..||+.+|++||++.+|++.|+++.+...
T Consensus 240 -------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 240 -------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp -------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00011234578999999999999999999999999999987654
No 158
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.2e-38 Score=339.57 Aligned_cols=267 Identities=23% Similarity=0.353 Sum_probs=190.3
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999864 68999999997543 2234667889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 662 FMPNGSLEKWLYSHN-----YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
|++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987432 45899999999999999999999 6679999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCC-c-hhhh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLPR-G-LTEV 812 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~-~-~~~~ 812 (870)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+... ..+. . +..+
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhh
Confidence 3221 2234468999999999876 46899999999999999999999999763222 222222221 1111 1 1110
Q ss_pred cc-----hhhhcccCcc-------hHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 813 VD-----ASLVREVQPS-------YAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 813 ~~-----~~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.. .......... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 0000000000 000113457899999999999999999999975
No 159
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.4e-38 Score=346.85 Aligned_cols=254 Identities=21% Similarity=0.239 Sum_probs=193.7
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||+||+|+.. +++.||+|++...... ...+.+|+.++++++||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3578999999999999999999965 7899999999765332 3567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc--eEEeccccccccCCCC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT--ARVSDFGISKLLGEDD 739 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~~~~~~ 739 (870)
|+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||++......
T Consensus 97 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 97 YASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 999999999997654 3899999999999999999999 667999999999999987765 999999998743221
Q ss_pred CcccccccccccccCCcccccCCCcCcc-cchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPK-CDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
.......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||........ ............
T Consensus 172 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~---------- 238 (361)
T 3uc3_A 172 --SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK---------- 238 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC----------
T ss_pred --CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC----------
Confidence 12234569999999999988877655 9999999999999999999976433221 111111110000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
.. ......++..+.+++.+||+.+|++|||+.|+++.
T Consensus 239 --~~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 --YS-IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --CC-CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred --CC-CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00 00000123468899999999999999999999864
No 160
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-38 Score=338.27 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=200.5
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34578999999999999999999965 68899999997543 334577899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.....
T Consensus 111 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999999999998654 4899999999999999999999 56699999999999999999999999999986643
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
... .......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ..........+.
T Consensus 187 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~---------- 253 (309)
T 2h34_A 187 EKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR---------- 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC----------
T ss_pred ccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC----------
Confidence 221 2223456899999999999999999999999999999999999999753211 111111111100
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhHhH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-CMTDVVVKLQKIKQT 865 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~i~~~ 865 (870)
.......++..+.+++.+||+.+|++|| ++.++++.|++..+.
T Consensus 254 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 254 -----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp -----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred -----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 0000112345688999999999999999 999999999877543
No 161
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-38 Score=342.29 Aligned_cols=249 Identities=21% Similarity=0.279 Sum_probs=201.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 657 (870)
..++|++.+.||+|+||.||+|+.. +++.||+|++++.. ......+..|.+++..+ +||+|+++++++...+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999976 47899999998653 23456678899999888 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||++||+|.+++...+. +++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||++.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999986543 899999999999999999999 66799999999999999999999999999985422
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+......
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-~~~~~~i~~~~~~----------- 239 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEHNVA----------- 239 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHCCCC-----------
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCCCC-----------
Confidence 21 223345799999999999999999999999999999999999999975211 1111111110000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMC-----MTDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs-----~~evl~ 857 (870)
. +...+..+.+++.+||+.+|++||+ +.++++
T Consensus 240 ---~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 ---Y-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---C-----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---C-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 0122456889999999999999995 466654
No 162
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=334.53 Aligned_cols=250 Identities=24% Similarity=0.399 Sum_probs=185.3
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|+. .+|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346799999999999999999996 4789999999975432 234678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++++|.+++......+++..++.++.|++.|++||| +++++||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999977667999999999999999999999 567999999999999999999999999999876432
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
.. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ . ..+...
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~------------~~~~~~--- 227 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L------------NKVVLA--- 227 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSS---
T ss_pred CC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H------------HHHhhc---
Confidence 21 22234689999999999998999999999999999999999999975321110 0 000000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... .+..++..+.+++.+||+.||++||++.++++
T Consensus 228 -~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 -DYE---MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -CCC---CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -ccC---CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 000 00112446889999999999999999999976
No 163
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=351.75 Aligned_cols=276 Identities=24% Similarity=0.309 Sum_probs=212.9
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC--eeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD--FKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999966 58999999997543 334567789999999999999999999998755 77999
Q ss_pred EecCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee----CCCCceEEecccccc
Q 002892 660 LEFMPNGSLEKWLYSHN--YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL----DKNMTARVSDFGISK 733 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~a~ 733 (870)
|||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++.
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998543 33899999999999999999999 6679999999999999 777889999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccC--------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHH--H
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASD--------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIK--L 803 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~--~ 803 (870)
...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............... .
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 764322 2234568999999998865 56788999999999999999999999754332222222211 1
Q ss_pred hcCCc-hhhhc---chhhhc--c-cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 804 SLPRG-LTEVV---DASLVR--E-VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 804 ~~~~~-~~~~~---~~~~~~--~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
..|.. +..+. +..+.. . .............+.+++..||+.||++||+++++++.++++.+.
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11211 11110 000000 0 000111245677889999999999999999999999999988764
No 164
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.2e-38 Score=331.83 Aligned_cols=253 Identities=19% Similarity=0.308 Sum_probs=206.3
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999965 78999999997543 3445778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++++|.+++.... .+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999987543 4899999999999999999999 667999999999999999999999999999866433322
Q ss_pred ccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 742 VTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||............|.......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------- 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS-------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc-------------
Confidence 23344568999999999987765 7799999999999999999999976443333233222110000
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
......+..+.+++.+||+.+|++||++.|+++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001122446889999999999999999999975
No 165
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.1e-38 Score=331.20 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=204.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999865 68999999997653 34457788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc---eEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT---ARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a~~~~ 736 (870)
|||+++++|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.+....
T Consensus 84 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 99999999999887654 4899999999999999999999 566999999999999986655 9999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .............
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~--------- 226 (284)
T 3kk8_A 160 DSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYDY--------- 226 (284)
T ss_dssp SSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC---------
T ss_pred cCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhccccC---------
Confidence 322 223456899999999999999999999999999999999999999653211 1111111110000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||+.+|++||++.|+++
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 227 ------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp ------CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00000123456889999999999999999999976
No 166
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.7e-38 Score=332.88 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=201.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4577999999999999999999865 57899999987543 2234678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++++|.+++..... +++..+..++.|++.|++||| ++||+||||||+||+++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 9999999999999986543 899999999999999999999 777999999999999999999999999998654322
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... .......... ..
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~--~~---------- 225 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVE--FT---------- 225 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTC--CC----------
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-HHHHHHHhCC--CC----------
Confidence 223346899999999999999999999999999999999999999753211 1111110000 00
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
. +..++..+.+++.+||+.+|++||++.|+++.
T Consensus 226 --~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 --F-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --C-----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --C-----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 01123468899999999999999999999864
No 167
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=339.65 Aligned_cols=262 Identities=22% Similarity=0.258 Sum_probs=207.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee----CCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN----LDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 657 (870)
..++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999999996 5789999999977666677889999999999999999999999863 34778
Q ss_pred EEEecCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 658 LVLEFMPNGSLEKWLYS---HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
+||||+++|+|.+++.. .+..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999985 3556999999999999999999999 56799999999999999999999999999876
Q ss_pred cCCCCCcc-------cccccccccccCCcccccCCC---cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 002892 735 LGEDDDSV-------TQTMTMATIGYMAPEYASDGI---ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS 804 (870)
Q Consensus 735 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 804 (870)
........ ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 53211110 112345799999999987654 68899999999999999999999965322222121111110
Q ss_pred cCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 805 LPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
. ... ....++..+.+++.+||+.||++||++.++++.|+++..
T Consensus 264 ~------------~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 264 L------------SIP-----QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp --------------CC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred C------------CCC-----ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 000 001234568999999999999999999999999998764
No 168
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.3e-38 Score=334.26 Aligned_cols=250 Identities=28% Similarity=0.341 Sum_probs=197.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 467899999999999999999964 68999999997654 2345778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEecccccccc
Q 002892 662 FMPNGSLEKWLYSH---NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLL 735 (870)
Q Consensus 662 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~ 735 (870)
|+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999998643 356999999999999999999999 6679999999999999 45688999999999866
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... ......||+.|+|||++. +.++.++||||+|+++|||++|+.||...... ..........+..
T Consensus 178 ~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~------- 244 (285)
T 3is5_A 178 KSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYKEPNY------- 244 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC-------
T ss_pred CCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccCCccc-------
Confidence 4322 223456899999999885 56889999999999999999999999763211 1111111100000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.......+..+.+++.+||+.||++||++.|+++
T Consensus 245 --------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 245 --------AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --------CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --------ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000012346889999999999999999999975
No 169
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.1e-38 Score=344.16 Aligned_cols=262 Identities=22% Similarity=0.369 Sum_probs=206.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEe------cCCcEEEEEEeech-hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL------FDGTNVAIKVFNLQ-LERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
..++|++.+.||+|+||.||+|++ .+++.||||++... .......+.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 457899999999999999999983 25778999999644 23445678899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEE
Q 002892 656 KALVLEFMPNGSLEKWLYSHN------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARV 726 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl 726 (870)
.++||||+++++|.+++...+ ..+++..++.++.|++.||+||| +++|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence 999999999999999998653 44899999999999999999999 667999999999999984 446999
Q ss_pred eccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhc
Q 002892 727 SDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSL 805 (870)
Q Consensus 727 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 805 (870)
+|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||..... ......+....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~ 262 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGG 262 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTC
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHhcCC
Confidence 99999976543333333344567899999999988899999999999999999998 8899865321 11111111100
Q ss_pred CCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 806 PRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.. . ....++..+.+++.+||+.+|++||++.++++.++.+.+..
T Consensus 263 ~~------------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 RM------------D-----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CC------------C-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CC------------C-----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 00 0 01123456889999999999999999999999999887643
No 170
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.9e-38 Score=338.92 Aligned_cols=248 Identities=21% Similarity=0.292 Sum_probs=192.9
Q ss_pred hcCCCCCCeeccccceeEEEEEe----cCCcEEEEEEeechh----hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 478999999997642 2334567889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.|+||||+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999998654 3899999999999999999999 567999999999999999999999999999754
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
.... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ...........
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~---------- 238 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKILKCKL---------- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCC----------
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCC----------
Confidence 3221 1223456899999999999999999999999999999999999999753211 11111111000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 857 (870)
... ...+..+.+++.+||+.+|++|| ++.|+++
T Consensus 239 ----~~p-----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ----NLP-----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ----CCC-----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ----CCC-----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 000 01234688999999999999999 6777765
No 171
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-38 Score=343.67 Aligned_cols=246 Identities=26% Similarity=0.324 Sum_probs=200.4
Q ss_pred cCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
+.|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999996 578999999987542 344567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||++ |++.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6888888766667999999999999999999999 566999999999999999999999999999865322
Q ss_pred cccccccccccccCCccccc---CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 741 SVTQTMTMATIGYMAPEYAS---DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
....||+.|+|||++. .+.++.++|||||||++|||++|+.||...... ...........+.
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~~~---------- 272 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPA---------- 272 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCC----------
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCCCC----------
Confidence 2346899999999884 567899999999999999999999998653211 1111111111000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
.....++..+.+++.+||+.+|++||++.++++.
T Consensus 273 -------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 273 -------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0011224468899999999999999999999753
No 172
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=344.80 Aligned_cols=266 Identities=15% Similarity=0.151 Sum_probs=200.8
Q ss_pred hcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechhhH-----------HHHHHHHHHHHHHhcCCCceeEEee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQLER-----------AFRSFESECEVLRNVRHRNLIKIFS 648 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 648 (870)
.++|++.+.||+|+||.||+|... ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999965 5788999998764321 1123667888899999999999999
Q ss_pred eeee----CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC--
Q 002892 649 SCCN----LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM-- 722 (870)
Q Consensus 649 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-- 722 (870)
++.. ....++||||+ +++|.+++...+ .+++.+++.++.|++.||+||| +++|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9987 67889999999 999999998665 5999999999999999999999 56799999999999998877
Q ss_pred ceEEeccccccccCCCCC-----cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchH
Q 002892 723 TARVSDFGISKLLGEDDD-----SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSL 797 (870)
Q Consensus 723 ~~kl~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~ 797 (870)
.+||+|||++..+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999987643211 111244578999999999999999999999999999999999999996532222222
Q ss_pred HHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhH
Q 002892 798 KHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIK 863 (870)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~ 863 (870)
...... ............. ....++..+.+++..||+.+|++||++.+|++.|+++.
T Consensus 271 ~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTN-LLDELPQSVLKWA--------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHH-HHHTTTHHHHHHS--------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHh-hcccccHHHHhhc--------cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 111111 0000000000000 00023457999999999999999999999999998764
No 173
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-38 Score=353.54 Aligned_cols=247 Identities=26% Similarity=0.402 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467999999999999999999965 799999999976532 2356789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999997654 4899999999999999999999 7779999999999999999999999999998764332
Q ss_pred CcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ......+. +...
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~-----------~~~~- 233 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTLFKKIC-----------DGIF- 233 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHHHHHHH-----------TTCC-
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHHHHHHh-----------cCCc-
Confidence 2234569999999999988765 6899999999999999999999975321 11111110 0000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. . +..++..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~--~----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 Y--T----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp C--C----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--C----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 0 0 0112346889999999999999999999986
No 174
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.7e-38 Score=337.31 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=204.9
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhH------HHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLER------AFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
..++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3467899999999999999999965 6899999999764321 35678999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC----ceEEecccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM----TARVSDFGI 731 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 731 (870)
.++||||+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 999999999999999998654 4899999999999999999999 66799999999999999887 799999999
Q ss_pred ccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 732 SKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 732 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+......
T Consensus 166 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~----- 236 (321)
T 2a2a_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITSVSYD----- 236 (321)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCC-----
T ss_pred ceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcccc-----
Confidence 98764332 223346899999999999999999999999999999999999999753211 111111100000
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+ ......++..+.+++.+||+.||++||++.|+++
T Consensus 237 -~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 237 -FD---------EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -CC---------HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -cC---------hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0001123456889999999999999999999986
No 175
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-38 Score=344.54 Aligned_cols=260 Identities=21% Similarity=0.286 Sum_probs=202.1
Q ss_pred HHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-----hHHHHHHHHHHHHHHhcCCCceeEEeeeeee
Q 002892 579 DIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-----ERAFRSFESECEVLRNVRHRNLIKIFSSCCN 652 (870)
Q Consensus 579 ~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 652 (870)
++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 44566788999999999999999999864 68899999997652 3445788999999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhc---------------------------------------CCCCCHHHHHHHHHHHHH
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSH---------------------------------------NYFLDMLERLNIMIDVGL 693 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 693 (870)
.+..++||||+++|+|.+++... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112467788899999999
Q ss_pred HHHHHHhcCCCCcEecccCCCceeeCCCC--ceEEeccccccccCCCCC--cccccccccccccCCcccccC--CCcCcc
Q 002892 694 ALEYLHHSHSTPVVHCNLKPNNILLDKNM--TARVSDFGISKLLGEDDD--SVTQTMTMATIGYMAPEYASD--GIISPK 767 (870)
Q Consensus 694 ~l~~Lh~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~--~~~~~~ 767 (870)
||+||| +++|+||||||+||+++.++ .+||+|||++..+..... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999 56699999999999998776 899999999986533221 112344568999999999865 678899
Q ss_pred cchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCC
Q 002892 768 CDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPE 847 (870)
Q Consensus 768 sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~ 847 (870)
+||||||+++|||++|+.||......+ ............ .......++..+.+++.+||+.+|+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCF---------------ENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCT---------------TSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhccccc---------------CCcccccCCHHHHHHHHHHcCCChh
Confidence 999999999999999999997632211 111111110000 0001112345688999999999999
Q ss_pred CCCCHHHHHH
Q 002892 848 QRMCMTDVVV 857 (870)
Q Consensus 848 ~RPs~~evl~ 857 (870)
+||++.++++
T Consensus 321 ~Rps~~~~l~ 330 (345)
T 3hko_A 321 ERFDAMRALQ 330 (345)
T ss_dssp TSCCHHHHHH
T ss_pred HCCCHHHHhc
Confidence 9999999987
No 176
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.1e-38 Score=337.90 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=208.0
Q ss_pred HhhcCCCCCC-eeccccceeEEEEEe---cCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 582 QATDGFNECN-LLGAGSFGSVYKGTL---FDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 582 ~~~~~~~~~~-~lg~G~~g~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
...++|++.+ .||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3456788887 999999999999964 246889999997653 23357799999999999999999999998 5677
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.++||||+++++|.+++...+ .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred cEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 899999999999999998754 4899999999999999999999 667999999999999999999999999999877
Q ss_pred CCCCCcc-cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhc
Q 002892 736 GEDDDSV-TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVV 813 (870)
Q Consensus 736 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (870)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------ 239 (291)
T 1xbb_A 168 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERM------ 239 (291)
T ss_dssp CTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCC------
T ss_pred ccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCC------
Confidence 5433222 2223346789999999988889999999999999999999 9999976322 1111111111000
Q ss_pred chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 814 DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
. .+..++..+.+++.+||+.||++||++.++++.|+++...-.
T Consensus 240 ------~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 240 ------G-----CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp ------C-----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred ------C-----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 0 011234578999999999999999999999999999877654
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-39 Score=349.01 Aligned_cols=267 Identities=13% Similarity=0.098 Sum_probs=208.1
Q ss_pred hcCCCCCCeeccccceeEEEEEecC---------CcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeE---------
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFD---------GTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIK--------- 645 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~--------- 645 (870)
.++|++.+.||+|+||.||+|+... ++.||+|++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999653 789999998754 35788999999999999887
Q ss_pred ------Eeeeeee-CCeeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCcee
Q 002892 646 ------IFSSCCN-LDFKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNIL 717 (870)
Q Consensus 646 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nil 717 (870)
+++++.. ....++||||+ +++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999865 356999999999999999999999 667999999999999
Q ss_pred eCCCC--ceEEeccccccccCCCCCc-----ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcc
Q 002892 718 LDKNM--TARVSDFGISKLLGEDDDS-----VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEM 790 (870)
Q Consensus 718 l~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~ 790 (870)
++.++ .+||+|||++..+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876432211 1123347899999999999999999999999999999999999999864
Q ss_pred ccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhhh
Q 002892 791 FTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFLV 868 (870)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~~ 868 (870)
............... .......+.... ...++..+.+++..||+.||++||++.+|++.|+++.+....
T Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 272 LPNTEDIMKQKQKFV-DKPGPFVGPCGH--------WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TTCHHHHHHHHHHHH-HSCCCEECTTSC--------EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHhcc-CChhhhhhhccc--------cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 323222222211100 000000000000 001235689999999999999999999999999999887543
No 178
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6e-38 Score=343.23 Aligned_cols=271 Identities=21% Similarity=0.263 Sum_probs=206.3
Q ss_pred chhHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-----CCceeEEeee
Q 002892 576 SYLDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR-----HRNLIKIFSS 649 (870)
Q Consensus 576 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~ 649 (870)
++.+.....++|++.+.||+|+||.||+|+.. +++.||||+++.. ......+..|+++++.++ ||||++++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 33444455689999999999999999999964 7899999999753 333456778999999986 9999999999
Q ss_pred eeeCCeeEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC--------
Q 002892 650 CCNLDFKALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK-------- 720 (870)
Q Consensus 650 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-------- 720 (870)
+...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccccc
Confidence 99999999999999 999999998653 45899999999999999999999 667999999999999975
Q ss_pred -----------------CCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhC
Q 002892 721 -----------------NMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTR 783 (870)
Q Consensus 721 -----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg 783 (870)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 255 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence 789999999999865332 2234689999999999999999999999999999999999
Q ss_pred CCCCCccccccchHHHHHHHhc--CCch---------hhhcchhhhc-ccCc---c------------hHHHHHHHHHHH
Q 002892 784 KKPTDEMFTGEMSLKHWIKLSL--PRGL---------TEVVDASLVR-EVQP---S------------YAKMDCLLRIMH 836 (870)
Q Consensus 784 ~~p~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~~-~~~~---~------------~~~~~~~~~l~~ 836 (870)
+.||...... ........... +... ...++..... .... . .........+.+
T Consensus 256 ~~pf~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (360)
T 3llt_A 256 SLLFRTHEHM-EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCD 334 (360)
T ss_dssp SCSCCCSSHH-HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHH
T ss_pred CCCCCCCcHH-HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHH
Confidence 9999763221 11211111111 1110 0000000000 0000 0 000111256789
Q ss_pred HHhhccCCCCCCCCCHHHHHH
Q 002892 837 LALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 837 l~~~cl~~~P~~RPs~~evl~ 857 (870)
++.+||+.||++|||++|+++
T Consensus 335 li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 335 FLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCChhhCCCHHHHhc
Confidence 999999999999999999975
No 179
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.2e-38 Score=339.09 Aligned_cols=247 Identities=22% Similarity=0.305 Sum_probs=179.1
Q ss_pred CCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCceeEEeeeeeeCCeeEEEEecCCCCC
Q 002892 590 CNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRNLIKIFSSCCNLDFKALVLEFMPNGS 667 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 667 (870)
.+.||+|+||.||+|... +++.||||++.... ...+.+|+.+++++. ||||+++++++.+....|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999965 68999999997543 356778999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC---ceEEeccccccccCCCCCcccc
Q 002892 668 LEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM---TARVSDFGISKLLGEDDDSVTQ 744 (870)
Q Consensus 668 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 744 (870)
|.+++...+ .+++.++..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||++....... ...
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 999998754 4899999999999999999999 66799999999999997765 89999999998664322 223
Q ss_pred cccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc--chHHHHHHHhcCCchhhhcchhhhcccC
Q 002892 745 TMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE--MSLKHWIKLSLPRGLTEVVDASLVREVQ 822 (870)
Q Consensus 745 ~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 822 (870)
....||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ..... +..........
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~------------~~~~i~~~~~~ 234 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE------------IMKKIKKGDFS 234 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH------------HHHHHTTTCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH------------HHHHHHcCCCC
Confidence 34568999999999999999999999999999999999999997632211 01111 11111111110
Q ss_pred -cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 823 -PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 823 -~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.......++..+.+++.+||+.||++||++.|+++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11111234567899999999999999999998863
No 180
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=368.75 Aligned_cols=258 Identities=25% Similarity=0.399 Sum_probs=204.5
Q ss_pred CCCCC-eeccccceeEEEEEec---CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 587 FNECN-LLGAGSFGSVYKGTLF---DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 587 ~~~~~-~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
+.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33334 7999999999999864 46679999997643 3356789999999999999999999999876 56899999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++|+|.+++...+..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.........
T Consensus 416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 99999999999877777999999999999999999999 667999999999999999999999999999876433221
Q ss_pred -ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 742 -VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 742 -~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.......+++.|+|||++.++.++.++|||||||++|||++ |+.||...... .+...+....
T Consensus 493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~-------------- 556 (613)
T 2ozo_A 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK-------------- 556 (613)
T ss_dssp ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTC--------------
T ss_pred eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC--------------
Confidence 11223345689999999998999999999999999999998 99999763221 1111111100
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHhh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTFL 867 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~~ 867 (870)
....+..++..+.+++..||+.+|++||++.+|++.|+.+.....
T Consensus 557 ---~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 557 ---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp ---CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred ---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 000112355679999999999999999999999999999876653
No 181
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.5e-38 Score=334.71 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=200.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC-CeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNL-DFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|+.. |+.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 3578999999999999999999864 8899999987543 346789999999999999999999987544 57899999
Q ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
|+++++|.+++...+ ..+++..+..++.|++.|++||| +++++||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999998543 23789999999999999999999 667999999999999999999999999998765322
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+..... .
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~------------~ 233 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYK------------M 233 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCC------------C
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCC------------C
Confidence 122357889999999998899999999999999999998 99998753221 11111100000 0
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+..++..+.+++.+||+.+|++||++.++++.|++++...
T Consensus 234 -----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 234 -----DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp -----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 001123457899999999999999999999999999998754
No 182
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-38 Score=332.02 Aligned_cols=246 Identities=25% Similarity=0.390 Sum_probs=180.1
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999985 478999999987542 23356788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+ ++++.+++...+ .+++.++..++.|++.|++||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 778888887654 4899999999999999999999 6669999999999999999999999999998664322
Q ss_pred CcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||...... ............
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~----------- 230 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVYT----------- 230 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC-----------
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-----------
Confidence 2233468999999999987765 78999999999999999999999753211 111111100000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. +..++..+.+++.+||+.||++|||+.|+++
T Consensus 231 --~-----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 --L-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --C-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --C-----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0 0112346889999999999999999999975
No 183
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=335.46 Aligned_cols=267 Identities=21% Similarity=0.254 Sum_probs=199.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999975 58999999986543 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||++++++.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+........
T Consensus 82 e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 9999999999887544 4899999999999999999999 66799999999999999999999999999987643222
Q ss_pred cccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh--cCCchhhhcch--
Q 002892 741 SVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS--LPRGLTEVVDA-- 815 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-- 815 (870)
......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......+. ........ ...........
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 158 --YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCG
T ss_pred --ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhccccccccccccccc
Confidence 2234568999999999876 6689999999999999999999999976432211 11111110 00000000000
Q ss_pred ----hhhcccC----cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 816 ----SLVREVQ----PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 816 ----~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
....... .......++..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000 00001123556889999999999999999999985
No 184
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.4e-38 Score=337.79 Aligned_cols=267 Identities=21% Similarity=0.290 Sum_probs=198.7
Q ss_pred hcCCCCC-CeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEE
Q 002892 584 TDGFNEC-NLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 584 ~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 660 (870)
.+.|++. +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4568774 78999999999999854 7899999999876555567889999999985 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc---eEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT---ARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 737 (870)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999998654 4899999999999999999999 566999999999999988776 99999999976532
Q ss_pred CCC-----cccccccccccccCCcccccC-----CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 002892 738 DDD-----SVTQTMTMATIGYMAPEYASD-----GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPR 807 (870)
Q Consensus 738 ~~~-----~~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 807 (870)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+..... .....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~ 243 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR---GEACP 243 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-------CCH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccc---cccch
Confidence 211 111223458999999999875 56889999999999999999999999764332210000 00000
Q ss_pred c-hhhhcchhhhcccC-cchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 808 G-LTEVVDASLVREVQ-PSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 808 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. ...+.......... +......++..+.+++.+||+.||++||++.|+++
T Consensus 244 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0 00001100000000 00011123557899999999999999999999986
No 185
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-38 Score=348.33 Aligned_cols=270 Identities=22% Similarity=0.310 Sum_probs=194.2
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeech--hhHHHHHHHHHHHHHHhcC-CCceeEEeeeeeeCC--e
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQ--LERAFRSFESECEVLRNVR-HRNLIKIFSSCCNLD--F 655 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~--~ 655 (870)
...++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34678999999999999999999864 7899999998543 2344567889999999997 999999999997544 6
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.|+||||++ ++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 6899998764 4899999999999999999999 667999999999999999999999999999865
Q ss_pred CCCC-------------------CcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccc
Q 002892 736 GEDD-------------------DSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM 795 (870)
Q Consensus 736 ~~~~-------------------~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 795 (870)
.... .....+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-MN 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-HH
Confidence 3211 1112234579999999999876 6789999999999999999999999976322 22
Q ss_pred hHHHHHHH-hcCCc--h--------hhhcchhh------hcccCcchH-----------HHHHHHHHHHHHhhccCCCCC
Q 002892 796 SLKHWIKL-SLPRG--L--------TEVVDASL------VREVQPSYA-----------KMDCLLRIMHLALGCCMDSPE 847 (870)
Q Consensus 796 ~~~~~~~~-~~~~~--~--------~~~~~~~~------~~~~~~~~~-----------~~~~~~~l~~l~~~cl~~~P~ 847 (870)
.+..+... ..|.. + ........ .......+. ...++..+.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 22222211 11111 0 00000000 000000000 002345789999999999999
Q ss_pred CCCCHHHHHHH
Q 002892 848 QRMCMTDVVVK 858 (870)
Q Consensus 848 ~RPs~~evl~~ 858 (870)
+|||+.|+++.
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999764
No 186
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3e-38 Score=340.55 Aligned_cols=258 Identities=27% Similarity=0.453 Sum_probs=204.9
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEE--EEEEeechh-hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNV--AIKVFNLQL-ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.+.||+|+||.||+|+.. +++.+ |+|++.... ....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 467999999999999999999854 56644 999887532 33456788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc
Q 002892 659 VLEFMPNGSLEKWLYSHN---------------YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT 723 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 723 (870)
||||+++|+|.+++...+ ..+++..++.++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999998543 46899999999999999999999 667999999999999999999
Q ss_pred eEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHH
Q 002892 724 ARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIK 802 (870)
Q Consensus 724 ~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~ 802 (870)
+||+|||++..... ........+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ....
T Consensus 181 ~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~ 252 (327)
T 1fvr_A 181 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 252 (327)
T ss_dssp EEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH
T ss_pred EEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH
Confidence 99999999874321 112233456889999999988889999999999999999998 99999753211 1111
Q ss_pred HhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 803 LSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
. . ....... .+..++..+.+++.+||+.+|++||++.++++.|+++.+..
T Consensus 253 ~-~--------~~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 253 K-L--------PQGYRLE-----KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp H-G--------GGTCCCC-----CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred H-h--------hcCCCCC-----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 0 0 0000000 01123457899999999999999999999999999987653
No 187
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.4e-38 Score=343.72 Aligned_cols=248 Identities=26% Similarity=0.312 Sum_probs=192.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHH-HHhcCCCceeEEeeeeeeCCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEV-LRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
.++|++.+.||+|+||.||+|+.+ +++.||+|++++.. ......+..|..+ ++.++||||+++++++...+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999965 58899999997654 2233455666666 567899999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||++||+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||++......
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999998654 3889999999999999999999 667999999999999999999999999999864222
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
. .......||+.|+|||++.+..++.++||||+||++|||++|..||...... .....+... ...
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~------------~~~ 257 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILNK------------PLQ 257 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHHHS------------CCC
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhc------------ccC
Confidence 1 2233457999999999999999999999999999999999999999753111 111111110 000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... ..+..+.+++.+||+.||++||++.+..+
T Consensus 258 --~~~-----~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 258 --LKP-----NITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp --CCS-----SSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred --CCC-----CCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 000 12346889999999999999999864433
No 188
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=340.95 Aligned_cols=243 Identities=25% Similarity=0.344 Sum_probs=201.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhh--------HHHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLE--------RAFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999985 4789999999976531 1234567899999999999999999999999
Q ss_pred CeeEEEEecCCCC-CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccc
Q 002892 654 DFKALVLEFMPNG-SLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGIS 732 (870)
Q Consensus 654 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 732 (870)
+..++||||+.+| +|.+++...+. +++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 99999986544 899999999999999999999 667999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 733 KLLGEDDDSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 733 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred eECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 87644322 233568999999999988776 78999999999999999999999752110
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
....... +..++..+.+++.+||+.+|++||++.++++.
T Consensus 237 -~~~~~~~-------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIHP-------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCCC-------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -HhhccCC-------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00124468899999999999999999999874
No 189
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=332.60 Aligned_cols=267 Identities=24% Similarity=0.314 Sum_probs=198.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhh-----HHHHHHHHHHHHHHhc---CCCceeEEeeeeeeC
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLE-----RAFRSFESECEVLRNV---RHRNLIKIFSSCCNL 653 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~ 653 (870)
..++|++.+.||+|+||+||+|+. .+++.||+|++..... .....+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999995 4789999999874321 1123455667666666 499999999999775
Q ss_pred C-----eeEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEe
Q 002892 654 D-----FKALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVS 727 (870)
Q Consensus 654 ~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~ 727 (870)
. ..++||||++ ++|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5789999997 59999998654 34899999999999999999999 6669999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcC
Q 002892 728 DFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLP 806 (870)
Q Consensus 728 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~ 806 (870)
|||++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+... ..+
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred eCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 999998764322 233456899999999999999999999999999999999999999763222 222222221 111
Q ss_pred C--chhhhc---chhhhcccCcc--hHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 807 R--GLTEVV---DASLVREVQPS--YAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 807 ~--~~~~~~---~~~~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. .+.... ........... ....+++..+.+++.+|++.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1 111000 00000000000 001123457889999999999999999999976
No 190
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.2e-38 Score=334.70 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=204.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee---------
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN--------- 652 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 652 (870)
...+|++.+.||+|+||.||+|... +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467899999999999999999976 79999999997654 246789999999999999999998854
Q ss_pred -------CCeeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCce
Q 002892 653 -------LDFKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTA 724 (870)
Q Consensus 653 -------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~ 724 (870)
....++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 34578999999999999999854 356899999999999999999999 5679999999999999999999
Q ss_pred EEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 002892 725 RVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS 804 (870)
Q Consensus 725 kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 804 (870)
||+|||++....... ......|++.|+|||++.+..++.++||||||+++|||++|..|+... ..+...
T Consensus 162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~~- 230 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFTD- 230 (284)
T ss_dssp EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHHH-
T ss_pred EECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHHH-
Confidence 999999998764332 223346899999999999999999999999999999999999886431 011000
Q ss_pred cCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 805 LPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..... ... .++..+.+++.+||+.||++||++.|+++.++.+.+..
T Consensus 231 -------~~~~~----~~~-----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 231 -------LRDGI----ISD-----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp -------HHTTC----CCT-----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred -------hhccc----ccc-----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 00000 000 12345789999999999999999999999999987653
No 191
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.8e-38 Score=337.07 Aligned_cols=254 Identities=23% Similarity=0.311 Sum_probs=200.8
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
...++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++||
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 34578999999999999999999976 58999999998766666778999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+++++|.+++......+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-- 170 (302)
T ss_dssp ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--
T ss_pred EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999999876666999999999999999999999 567999999999999999999999999987543110
Q ss_pred cccccccccccccCCcccc-----cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 741 SVTQTMTMATIGYMAPEYA-----SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
........|++.|+|||++ .+..++.++||||||+++|+|++|+.||...... .....+.....+.
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-------- 241 (302)
T 2j7t_A 171 LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSDPPT-------- 241 (302)
T ss_dssp HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCC--------
T ss_pred ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-HHHHHHhccCCcc--------
Confidence 1112234689999999988 4677899999999999999999999999763221 1111111110000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...+..++..+.+++.+||+.+|++||++.++++
T Consensus 242 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 --------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0011123456889999999999999999999975
No 192
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=340.78 Aligned_cols=266 Identities=18% Similarity=0.256 Sum_probs=198.3
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHH-HHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEec
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERA-FRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999965 78999999987543221 12345799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcc
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSV 742 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 742 (870)
++ |+|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999887777999999999999999999999 6679999999999999999999999999998653322 2
Q ss_pred cccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-c--CCchhhhcchhhh
Q 002892 743 TQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-L--PRGLTEVVDASLV 818 (870)
Q Consensus 743 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~ 818 (870)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.... . +..+.........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHhchhhhcchhh
Confidence 2334568999999999876 56899999999999999999999999763222 2222222211 1 1112221111100
Q ss_pred ccc------Cc--chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REV------QP--SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~------~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... .. ......++..+.+++.+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 00 0011123456889999999999999999999976
No 193
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.4e-37 Score=328.16 Aligned_cols=257 Identities=22% Similarity=0.297 Sum_probs=204.5
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh------HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE------RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 657 (870)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999976 689999999876431 13577899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC----ceEEecccccc
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM----TARVSDFGISK 733 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~a~ 733 (870)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +++++||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997644 4899999999999999999999 66799999999999998877 89999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhc
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVV 813 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (870)
...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... .....+..... ..
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~---- 230 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNY--DF---- 230 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCC--CC----
T ss_pred eccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHHHHhHhccc--CC----
Confidence 764322 223346899999999999999999999999999999999999999753211 11111100000 00
Q ss_pred chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHhHh
Q 002892 814 DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV--KLQKIKQ 864 (870)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~--~L~~i~~ 864 (870)
.......++..+.+++.+||+.+|++||++.++++ .++.+++
T Consensus 231 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 231 ---------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ---------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ---------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 00011123456889999999999999999999987 4555544
No 194
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.9e-37 Score=337.22 Aligned_cols=255 Identities=25% Similarity=0.337 Sum_probs=204.6
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--------hHHHHHHHHHHHHHHhc-CCCceeEEeee
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--------ERAFRSFESECEVLRNV-RHRNLIKIFSS 649 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 649 (870)
.....++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445578999999999999999999975 79999999987543 22356788999999999 79999999999
Q ss_pred eeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecc
Q 002892 650 CCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDF 729 (870)
Q Consensus 650 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 729 (870)
+......++||||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 999999999999999999999998653 4899999999999999999999 667999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCcccccC------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH
Q 002892 730 GISKLLGEDDDSVTQTMTMATIGYMAPEYASD------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL 803 (870)
Q Consensus 730 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~ 803 (870)
|++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+...
T Consensus 245 G~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~i~~~ 320 (365)
T 2y7j_A 245 GFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-ILMLRMIMEG 320 (365)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHT
T ss_pred CcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhC
Confidence 9998764332 2234568999999998853 3588899999999999999999999965211 1111111111
Q ss_pred hcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 804 SLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.... .......++..+.+++.+||+.||++||++.++++
T Consensus 321 ~~~~---------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 321 QYQF---------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CCCC---------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCC---------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 00011123456889999999999999999999986
No 195
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.4e-38 Score=353.03 Aligned_cols=249 Identities=25% Similarity=0.296 Sum_probs=194.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999964 68999999997642 33445678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||. .+||+||||||+||+++.++.+||+|||++......
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD- 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC-
Confidence 99999999999998654 48999999999999999999993 167999999999999999999999999999754322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...
T Consensus 303 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~--------------- 364 (446)
T 4ejn_A 303 -GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILME--------------- 364 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC---------------
T ss_pred -CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHhC---------------
Confidence 2223346799999999999999999999999999999999999999965211 1111111100
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 857 (870)
... .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 365 ~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 365 EIR---FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCC---CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 000 0011234688999999999999999 9999875
No 196
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=365.16 Aligned_cols=258 Identities=25% Similarity=0.426 Sum_probs=209.5
Q ss_pred HhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
...++|++.+.||+|+||.||+|.+.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 34567888999999999999999988888899999976542 34678999999999999999999999876 67899999
Q ss_pred cCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
|+++|+|.+++... +..+++.+++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE- 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-
Confidence 99999999999853 345899999999999999999999 6669999999999999999999999999998664221
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
........++..|+|||++..+.++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~------------- 482 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR------------- 482 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTCC-------------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC-------------
Confidence 111223456789999999998999999999999999999999 899987632211 1111110000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHh
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQ 864 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~ 864 (870)
...+..++..+.++|.+||+.+|++||++.+|++.|+++..
T Consensus 483 ----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 483 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 00112345678999999999999999999999999998754
No 197
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.7e-38 Score=343.97 Aligned_cols=264 Identities=23% Similarity=0.326 Sum_probs=205.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467999999999999999999965 68999999997653 3445778999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCc
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDS 741 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 741 (870)
|+++++|.+++...+. +++..+..++.|++.|++|||+. .||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 9999999999986543 89999999999999999999942 26999999999999999999999999998754211
Q ss_pred ccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH------------------
Q 002892 742 VTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL------------------ 803 (870)
Q Consensus 742 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~------------------ 803 (870)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||......+. ......
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEL--ELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp -C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHH--HHHHC-------------------
T ss_pred -cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhcccccccCCCCCCCcccCCC
Confidence 12234689999999999999999999999999999999999999975322111 100000
Q ss_pred ---------hcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 804 ---------SLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 804 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+....+..+....... .......++..+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCC-CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCC-CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000011112221111111 11111123557899999999999999999999976
No 198
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.6e-38 Score=335.41 Aligned_cols=260 Identities=26% Similarity=0.383 Sum_probs=199.1
Q ss_pred hcCCCCCCeeccccceeEEEEEec--CCc--EEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF--DGT--NVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK 656 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 656 (870)
.++|++.+.||+|+||.||+|++. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467999999999999999999853 333 68999987542 345678899999999999999999999998755 8
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 657 ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
++||||+++++|.+++......+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876666999999999999999999999 5679999999999999999999999999998775
Q ss_pred CCCCcc-cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcc
Q 002892 737 EDDDSV-TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 737 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (870)
...... ......+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+.....
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~-------- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDKEGE-------- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTSCC--------
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHccCC--------
Confidence 433222 2233457889999999998889999999999999999999 99999753211 11111100000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
.......++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 243 --------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 243 --------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp --------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred --------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0000112345789999999999999999999999999988654
No 199
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5e-37 Score=325.12 Aligned_cols=247 Identities=21% Similarity=0.371 Sum_probs=197.2
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee----CCeeE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN----LDFKA 657 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 657 (870)
..|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34778889999999999999864 68899999987543 4456778999999999999999999998865 35689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeC-CCCceEEeccccccc
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLD-KNMTARVSDFGISKL 734 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~ 734 (870)
+||||+++++|.+++...+ .+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999998654 3899999999999999999999 666 99999999999997 789999999999976
Q ss_pred cCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcc
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (870)
.... ......||+.|+|||++. +.++.++||||+|+++|+|++|+.||............ .....
T Consensus 182 ~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~~~--------- 246 (290)
T 1t4h_A 182 KRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR-VTSGV--------- 246 (290)
T ss_dssp CCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH-HTTTC---------
T ss_pred cccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH-HhccC---------
Confidence 5332 223346899999999886 45899999999999999999999999753222111111 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+......++..+.+++.+||+.+|++||++.|+++
T Consensus 247 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 247 -------KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------CccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000001112346889999999999999999999975
No 200
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.8e-37 Score=346.73 Aligned_cols=263 Identities=18% Similarity=0.216 Sum_probs=210.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCC-CceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRH-RNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|+. .+++.||||++...... ..+..|+++++.++| +++..+..++...+..++||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 357899999999999999999996 47899999998755432 357889999999976 56667777777888999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 737 (870)
||+ +++|.+++......+++..++.++.||+.||+||| +++|+||||||+||++ +.++.+||+|||++..+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 99999999876667999999999999999999999 6679999999999999 5889999999999987754
Q ss_pred CCCcc-----cccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccch--HHHHHHHhcCCchh
Q 002892 738 DDDSV-----TQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMS--LKHWIKLSLPRGLT 810 (870)
Q Consensus 738 ~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~ 810 (870)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... +..+..........
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE 238 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH
Confidence 33211 122457999999999999999999999999999999999999999874332211 11111111111000
Q ss_pred hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhH
Q 002892 811 EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQT 865 (870)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~ 865 (870)
. ....++.++.+++..||+.+|++||++.+|++.|+++.+.
T Consensus 239 ~--------------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 239 A--------------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp H--------------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred H--------------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0112356789999999999999999999999999998764
No 201
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-37 Score=350.49 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=205.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.+.. ......+.+|++++++++||||+++++++.+.+..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999965 79999999997643 2334668899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 659 VLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
||||++||+|.+++...+ ..+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998543 35899999999999999999999 56799999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc--hHHHHHHHhcCCchhhhcch
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM--SLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 815 (870)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .+...+. ..+..+.
T Consensus 339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~-~~~~~~p----- 409 (576)
T 2acx_A 339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EVPEEYS----- 409 (576)
T ss_dssp TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH-HCCCCCC-----
T ss_pred Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh-cccccCC-----
Confidence 32 22335799999999999999999999999999999999999999976432211 1111111 0111000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~ 857 (870)
...+..+.+++.+||+.||++|| ++.||++
T Consensus 410 ------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11234688999999999999999 7788865
No 202
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.8e-38 Score=365.38 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=200.4
Q ss_pred CeeccccceeEEEEEec---CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecCCC
Q 002892 591 NLLGAGSFGSVYKGTLF---DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFMPN 665 (870)
Q Consensus 591 ~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 665 (870)
+.||+|+||.||+|.+. .++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999643 46789999997653 2345789999999999999999999999864 557899999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC-cccc
Q 002892 666 GSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD-SVTQ 744 (870)
Q Consensus 666 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 744 (870)
|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++..+..... ....
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 4899999999999999999999 56699999999999999999999999999987754332 2223
Q ss_pred cccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCc
Q 002892 745 TMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQP 823 (870)
Q Consensus 745 ~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (870)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~----------------- 590 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGER----------------- 590 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC-----------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-----------------
Confidence 33456789999999999999999999999999999998 99999763221 11111111000
Q ss_pred chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 824 SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 824 ~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...+..++..+.+++..||+.||++||++.+|++.|+++..+.
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0011234567999999999999999999999999999987764
No 203
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-37 Score=342.53 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=190.6
Q ss_pred hcCCCCC-CeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHh-cCCCceeEEeeeeee----CCee
Q 002892 584 TDGFNEC-NLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRN-VRHRNLIKIFSSCCN----LDFK 656 (870)
Q Consensus 584 ~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~----~~~~ 656 (870)
.++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|++++.+ .+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 4566665 68999999999999965 6899999998643 345677887644 589999999998865 5678
Q ss_pred EEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEEeccccc
Q 002892 657 ALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARVSDFGIS 732 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a 732 (870)
|+||||+++|+|.+++...+ ..+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999998653 45899999999999999999999 567999999999999987 789999999999
Q ss_pred cccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc--hHHHHHH-HhcCCch
Q 002892 733 KLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM--SLKHWIK-LSLPRGL 809 (870)
Q Consensus 733 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~--~~~~~~~-~~~~~~~ 809 (870)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+. ..+..
T Consensus 212 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~-- 286 (400)
T 1nxk_A 212 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF-- 286 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC--
T ss_pred cccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC--
Confidence 8654322 23345689999999999999999999999999999999999999976432211 1111111 10000
Q ss_pred hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 810 TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+......++..+.+++.+||+.||++|||+.|+++.
T Consensus 287 -------------~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 287 -------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp -------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000011234578999999999999999999999874
No 204
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1e-37 Score=331.11 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=204.3
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467899999999999999999966 58899999987653 34557788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++++|.+++...+ .+++.++..++.|++.|++||| ++|++||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999987654 4899999999999999999999 6679999999999999999999999999998764322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
. ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ ....+... . .
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~---~---------~-- 232 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKN---E---------Y-- 232 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTT---C---------C--
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhc---c---------C--
Confidence 2 2233568999999999999899999999999999999999999997532111 01110000 0 0
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
.. +..++..+.+++.+||+.+|++||++.|+++.
T Consensus 233 ~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 SI-----PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp CC-----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CC-----ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 01123468899999999999999999999763
No 205
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-36 Score=342.69 Aligned_cols=347 Identities=26% Similarity=0.372 Sum_probs=248.6
Q ss_pred CCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcE
Q 002892 12 GNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVR 91 (870)
Q Consensus 12 ~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 91 (870)
..+++|+.|++++|.+.. +| .+..+++|++|++++|.+++ +|. ++.+++|++|++++|++++..+ +.++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 347899999999999984 66 48899999999999999995 454 9999999999999999995444 999999999
Q ss_pred EeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccc
Q 002892 92 LDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQL 171 (870)
Q Consensus 92 L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 171 (870)
|++++|++++. +. +..+++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDI-DP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCC-hH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 99999999854 33 8999999999999999995 44 58999999999997 5665443 388999999999999999
Q ss_pred cccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCC
Q 002892 172 SGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSN 251 (870)
Q Consensus 172 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 251 (870)
++... ...+++|++|++++|++++..+ +..+++|++|++++|++++. ..+..+++|+.|++++|.++...
T Consensus 190 ~~~~~---l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--- 259 (466)
T 1o6v_A 190 SDISV---LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--- 259 (466)
T ss_dssp CCCGG---GGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG---
T ss_pred CCChh---hccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccch---
Confidence 86532 3468999999999999997655 78899999999999999853 46888888888888888877532
Q ss_pred CCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCc
Q 002892 252 GEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPT 331 (870)
Q Consensus 252 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 331 (870)
.+..+++|++|++++|++.++. . +..+++|+.|++++|++.+..+
T Consensus 260 -------~~~~l~~L~~L~l~~n~l~~~~--------------------------~-~~~l~~L~~L~L~~n~l~~~~~- 304 (466)
T 1o6v_A 260 -------PLSGLTKLTELKLGANQISNIS--------------------------P-LAGLTALTNLELNENQLEDISP- 304 (466)
T ss_dssp -------GGTTCTTCSEEECCSSCCCCCG--------------------------G-GTTCTTCSEEECCSSCCSCCGG-
T ss_pred -------hhhcCCCCCEEECCCCccCccc--------------------------c-ccCCCccCeEEcCCCcccCchh-
Confidence 2556667777777776665321 1 3445555555555555543111
Q ss_pred hhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCC
Q 002892 332 TLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLI 411 (870)
Q Consensus 332 ~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 411 (870)
+..+++|+.|+|++|++++..| +..+++|+.|++++|.+++. ..+..+++|+
T Consensus 305 ------------------------~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 356 (466)
T 1o6v_A 305 ------------------------ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNIN 356 (466)
T ss_dssp ------------------------GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCC
T ss_pred ------------------------hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCC
Confidence 2334455555555555554433 44445555555555555432 2344444555
Q ss_pred EEEccCCccCCcccccccCCCCCCEEEcCCCcccC
Q 002892 412 YLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQD 446 (870)
Q Consensus 412 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 446 (870)
.|++++|++++..| +..+++|+.|++++|.+++
T Consensus 357 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 357 WLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred EEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 55555555444433 4444444444444444443
No 206
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.6e-37 Score=331.36 Aligned_cols=251 Identities=23% Similarity=0.291 Sum_probs=201.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
..++|++.+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467899999999999999999965 789999999987655455678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccCCC
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 738 (870)
|+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999987654 3899999999999999999999 6679999999999999 78899999999998754321
Q ss_pred CCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....+...... .
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~-~--------- 226 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYE-F--------- 226 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCC-C---------
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCC-C---------
Confidence 223346899999999999999999999999999999999999999753211 111111110000 0
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+......++..+.+++.+||+.||++||++.|+++
T Consensus 227 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 227 ----ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00001123456889999999999999999999976
No 207
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=332.57 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=200.1
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34678999999999999999999965 58999999997643 2366889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+++++|.+++......+++..+..++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+.......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 999999999999866666999999999999999999999 6669999999999999999999999999997664321
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... .........+...
T Consensus 180 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~----------- 245 (314)
T 3com_A 180 -AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPPTF----------- 245 (314)
T ss_dssp -SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC-----------
T ss_pred -cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCccc-----------
Confidence 22334568999999999999999999999999999999999999997532111 0011111100000
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+..++..+.+++.+||+.||++||++.++++
T Consensus 246 ----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 ----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 001122456889999999999999999999976
No 208
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.2e-38 Score=340.06 Aligned_cols=271 Identities=24% Similarity=0.322 Sum_probs=199.8
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhH-----HHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLER-----AFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
+....++|++.+.||+|+||.||+|+.. +|+.||+|++...... ....+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 4455688999999999999999999965 6899999998754321 124678899999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+..++||||+++ +|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999999976 899999877767899999999999999999999 6669999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCC--ch
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLPR--GL 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~--~~ 809 (870)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|..||...... ..+..+... ..+. .+
T Consensus 161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhh
Confidence 764332 223345689999999998764 5889999999999999999999998763221 222222221 1111 11
Q ss_pred hhhc---chhhhcccCc---chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 TEVV---DASLVREVQP---SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ~~~~---~~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+.. +......... ......++..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 1110 0000000000 0001123467899999999999999999999976
No 209
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.8e-37 Score=347.14 Aligned_cols=262 Identities=21% Similarity=0.226 Sum_probs=196.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeech--hhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC------
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQ--LERAFRSFESECEVLRNVRHRNLIKIFSSCCNL------ 653 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 653 (870)
..++|++.+.||+|+||+||+|... +++.||||++... .....+++.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999855 6899999999764 234457788999999999999999999998654
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 356999999976 46666643 3899999999999999999999 6679999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCc--h-
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPRG--L- 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~--~- 809 (870)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ...+..+.... .+.. +
T Consensus 213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 213 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp ----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHT
T ss_pred ecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHH
Confidence 76432 223445789999999999999999999999999999999999999976321 11222222211 1100 0
Q ss_pred ---------------------hhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 ---------------------TEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...+...... ............+.+++.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFP--ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSC--CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccc--cccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 001112233567899999999999999999999986
No 210
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.8e-38 Score=337.83 Aligned_cols=267 Identities=22% Similarity=0.292 Sum_probs=200.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467999999999999999999965 58999999986543 334566789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||++++++.++....+ .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 104 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 9999999988876444 4899999999999999999999 66799999999999999999999999999986643221
Q ss_pred cccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc--CCchhhhcc---
Q 002892 741 SVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL--PRGLTEVVD--- 814 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--- 814 (870)
......|++.|+|||++.+. .++.++||||+||++|+|++|+.||......+ ....+..... .......+.
T Consensus 180 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 --VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhcc
Confidence 22345689999999999775 68999999999999999999999997643221 1222111100 000000000
Q ss_pred -------hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 -------ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 -------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+..............++..+.+++.+||+.||++||++.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000111134567999999999999999999999876
No 211
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.7e-38 Score=338.57 Aligned_cols=258 Identities=22% Similarity=0.265 Sum_probs=191.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCceeEEeeeee--------e
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRNLIKIFSSCC--------N 652 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~--------~ 652 (870)
...+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4468999999999999999999964 78999999987776666778899999999996 999999999984 3
Q ss_pred CCeeEEEEecCCCCCHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecccCCCceeeCCCCceEEec
Q 002892 653 LDFKALVLEFMPNGSLEKWLYS--HNYFLDMLERLNIMIDVGLALEYLHHSHSTP--VVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~--ivH~dlk~~Nill~~~~~~kl~D 728 (870)
....++||||++ |+|.+++.. ....+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 445789999995 799998874 3445999999999999999999999 777 99999999999999999999999
Q ss_pred cccccccCCCCCcc----------cccccccccccCCcccc---cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc
Q 002892 729 FGISKLLGEDDDSV----------TQTMTMATIGYMAPEYA---SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM 795 (870)
Q Consensus 729 fg~a~~~~~~~~~~----------~~~~~~g~~~y~aPE~~---~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 795 (870)
||++.......... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 99998765432211 11134589999999998 5667889999999999999999999999652111
Q ss_pred hHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 796 SLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
......... ... ..++..+.+++.+||+.+|++||++.|+++.|+++.+..
T Consensus 260 ---~~~~~~~~~------------~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 260 ---RIVNGKYSI------------PPH-----DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp ---------CCC------------CTT-----CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ---HhhcCcccC------------Ccc-----cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 000000000 000 011234778999999999999999999999999998754
No 212
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.8e-37 Score=327.54 Aligned_cols=246 Identities=26% Similarity=0.342 Sum_probs=202.9
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999965 67899999997643 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++++|.+++...+ .+++..+..++.|++.|++||| ++|++||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999998654 3899999999999999999999 777999999999999999999999999998765322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ ....... ...
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~------------~~~-- 229 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVN------------VDL-- 229 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT------------TCC--
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhc------------ccc--
Confidence 1233468999999999999999999999999999999999999997532111 0111000 000
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... ...+..+.+++.+|++.+|++||++.++++
T Consensus 230 ~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 KFP-----PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp CCC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC-----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 000 112346889999999999999999999986
No 213
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.8e-38 Score=339.42 Aligned_cols=250 Identities=24% Similarity=0.306 Sum_probs=197.9
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 660 (870)
..++|++.+.||+|+||.||+|..+ +++.||+|++...... ..+|++++.++ +||||+++++++.+.+..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999965 6899999999765432 35678888887 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC----CceEEeccccccccC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN----MTARVSDFGISKLLG 736 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~~~ 736 (870)
||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||++..+ +.+||+|||++....
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999998654 4899999999999999999999 6679999999999998543 359999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc-chHHHHHH-HhcCCchhhhcc
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE-MSLKHWIK-LSLPRGLTEVVD 814 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~ 814 (870)
.... ......||+.|+|||++.+..++.++||||+||++|||++|..||....... ..+...+. ...+.
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~------- 242 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL------- 242 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCC-------
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCccc-------
Confidence 3221 2234568999999999988889999999999999999999999997532111 11111111 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.......++..+.+++.+||+.||++||++.++++
T Consensus 243 --------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 --------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp --------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000123456889999999999999999999876
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.6e-38 Score=337.82 Aligned_cols=268 Identities=21% Similarity=0.273 Sum_probs=195.6
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh--HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
...++|++.+.||+|+||+||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++...+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34568999999999999999999854 789999999975432 234567789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC-----CCCceEEecccccc
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-----KNMTARVSDFGISK 733 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfg~a~ 733 (870)
||||++ |+|.+++...+. +++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCS-EEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCC-CCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999997 599999986654 899999999999999999999 56799999999999994 45569999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHH-HhcCCc--h
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIK-LSLPRG--L 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~-~~~~~~--~ 809 (870)
...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+..... ...+.. +
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhh
Confidence 764322 223344689999999999874 4899999999999999999999999763222 12222222 111111 1
Q ss_pred hhhcc-----hhhhcccCc---chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 TEVVD-----ASLVREVQP---SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ~~~~~-----~~~~~~~~~---~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..... ......... ......++..+.+++.+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 10000 000000000 0001113457889999999999999999999975
No 215
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=326.31 Aligned_cols=251 Identities=25% Similarity=0.372 Sum_probs=198.3
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEecC
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLEFM 663 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 663 (870)
++|.....||+|+||.||+|... +++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 44556669999999999999964 68899999998766666678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC-CCceEEeccccccccCCCCC
Q 002892 664 PNGSLEKWLYSHN--YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK-NMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 664 ~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~ 740 (870)
++++|.+++.... ..+++..+..++.|++.||+||| ++|++||||||+||+++. ++.+||+|||.+.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999998653 34678999999999999999999 567999999999999987 8999999999998764322
Q ss_pred cccccccccccccCCcccccCCC--cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhh
Q 002892 741 SVTQTMTMATIGYMAPEYASDGI--ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLV 818 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 818 (870)
.......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.....................
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------- 246 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE---------- 246 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC----------
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc----------
Confidence 1223456899999999987643 789999999999999999999999753221111111000000000
Q ss_pred cccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 819 REVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 819 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 247 -------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 247 -------IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00123456889999999999999999999975
No 216
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-37 Score=345.95 Aligned_cols=253 Identities=25% Similarity=0.309 Sum_probs=192.7
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--------hHHHHHHHHHHHHHHhcCCCceeEEeeeeee
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--------ERAFRSFESECEVLRNVRHRNLIKIFSSCCN 652 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 652 (870)
...++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45678999999999999999999865 68999999997642 1122347899999999999999999999754
Q ss_pred CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC---ceEEecc
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM---TARVSDF 729 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~kl~Df 729 (870)
+..++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 55799999999999999887554 4899999999999999999999 56699999999999997544 5999999
Q ss_pred ccccccCCCCCcccccccccccccCCcccccC---CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 002892 730 GISKLLGEDDDSVTQTMTMATIGYMAPEYASD---GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLP 806 (870)
Q Consensus 730 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 806 (870)
|++...+... ......||+.|+|||++.+ ..++.++||||+||++|+|++|..||........ +...+.....
T Consensus 287 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~~~~~ 362 (419)
T 3i6u_A 287 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSGKY 362 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHHTTCC
T ss_pred ccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHhcCCC
Confidence 9998764322 2334568999999999853 5678899999999999999999999976332222 2221111100
Q ss_pred CchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 807 RGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... ......++..+.+++.+||+.||++||++.|+++
T Consensus 363 ~~~--------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 363 NFI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCC--------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 000 0011123557899999999999999999999986
No 217
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-37 Score=336.93 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999965 58899999987653 34557788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++++|.+++.... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999987654 4899999999999999999999 6679999999999999999999999999998764322
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
. ......|++.|+|||++.+..++.++||||||+++|||++|+.||......+ ....+..... .
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~----------- 259 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEY--S----------- 259 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC--C-----------
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCC--C-----------
Confidence 2 2234568999999999999999999999999999999999999997532111 1111111000 0
Q ss_pred ccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 820 EVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 820 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. +..++..+.+++.+||+.||++||++.|+++
T Consensus 260 -~-----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 260 -I-----PKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -C-----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -C-----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0012346789999999999999999999976
No 218
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.6e-37 Score=331.26 Aligned_cols=250 Identities=23% Similarity=0.364 Sum_probs=205.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
..+.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 3467899999999999999999864 68999999997653 344578899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
||+++++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 100 e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp ECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred EeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 999999999999753 4899999999999999999999 5679999999999999999999999999998764322
Q ss_pred cccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcc
Q 002892 741 SVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVRE 820 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (870)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+....+..
T Consensus 174 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~------------ 238 (303)
T 3a7i_A 174 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPPT------------ 238 (303)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCC------------
T ss_pred -cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCCC------------
Confidence 1223456899999999999999999999999999999999999999753211 1111111111100
Q ss_pred cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 821 VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 821 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
.. ..++..+.+++.+||+.+|++||++.++++.
T Consensus 239 ~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 239 LE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred Cc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 1123468899999999999999999999874
No 219
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.4e-37 Score=348.95 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=204.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh---HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+... .....+..|++++++++||||+++++++...+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467899999999999999999975 699999999976532 3346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSH---NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
|||++||+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||++....
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999854 345999999999999999999999 6679999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+..... ...
T Consensus 341 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~--------~~~ 409 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVL--------EQA 409 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHH--------HCC
T ss_pred CCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHh--------hcc
Confidence 3322 22334799999999999999999999999999999999999999976422111 111111000 000
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM-----TDVVV 857 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 857 (870)
. .. +...+..+.+++.+||+.||++||++ .+|++
T Consensus 410 ~--~~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 V--TY-----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp C--CC-----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c--CC-----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0 00 01224568899999999999999975 55553
No 220
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.1e-37 Score=349.91 Aligned_cols=252 Identities=25% Similarity=0.299 Sum_probs=202.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++......++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4567999999999999999999965 78999999997543 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC---CCCceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD---KNMTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a~~~~ 736 (870)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999987654 4899999999999999999999 66799999999999995 45679999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||..... ......+.....+..
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~-------- 242 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGKYAFD-------- 242 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCSC--------
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCC--------
Confidence 322 2334569999999999875 589999999999999999999999975321 111111111111110
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
......++..+.+++.+||+.+|++|||+.++++.
T Consensus 243 -------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 -------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00111234568899999999999999999999873
No 221
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-37 Score=325.33 Aligned_cols=249 Identities=25% Similarity=0.411 Sum_probs=195.9
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3478999999999999999999976 78999999997653 2335678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCC
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGED 738 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 738 (870)
||||+++++|.+++...+. +++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999986543 899999999999999999999 556999999999999999999999999999876432
Q ss_pred CCcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 739 DDSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
. ......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...... .....+......
T Consensus 165 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~---------- 229 (276)
T 2h6d_A 165 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGVFY---------- 229 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC----------
T ss_pred c---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCccc----------
Confidence 2 2233468999999999987765 68999999999999999999999753111 111111110000
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
. +..++..+.+++.+||+.||++||++.|+++.
T Consensus 230 ---~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 ---I-----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---C-----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 01123468899999999999999999999874
No 222
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.8e-38 Score=329.45 Aligned_cols=256 Identities=22% Similarity=0.321 Sum_probs=201.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee--CCeeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN--LDFKAL 658 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 658 (870)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999965 78999999997543 3456778999999999999999999998754 568899
Q ss_pred EEecCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 659 VLEFMPNGSLEKWLYSH---NYFLDMLERLNIMIDVGLALEYLHHSH--STPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
||||+++++|.+++... +..+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||.+.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999843 345899999999999999999999432 1239999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhc
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVV 813 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (870)
...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+......
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~~~------ 234 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREGKFR------ 234 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC------
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhcccc------
Confidence 764322 122334689999999999998999999999999999999999999976321 1111111110000
Q ss_pred chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002892 814 DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQ 860 (870)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~ 860 (870)
.. +..++..+.+++.+||+.+|++||++.||++.+.
T Consensus 235 ------~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 ------RI-----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ------CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ------cC-----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 00 0123457889999999999999999999987653
No 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.6e-37 Score=332.89 Aligned_cols=261 Identities=19% Similarity=0.280 Sum_probs=201.1
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCceeEEeeeeee--CCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRNLIKIFSSCCN--LDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... .+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36799999999999999999985 478999999987443 356889999999997 9999999999987 6678999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC-ceEEeccccccccCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM-TARVSDFGISKLLGED 738 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~ 738 (870)
|||+++++|.+++.. +++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||++......
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999999854 789999999999999999999 66799999999999999776 8999999999876433
Q ss_pred CCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcc---
Q 002892 739 DDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD--- 814 (870)
Q Consensus 739 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 814 (870)
. ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.........+.......-.....+.++
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2234468999999999877 67899999999999999999999999653332222222221111111111110
Q ss_pred ------------hhhhcc---cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 ------------ASLVRE---VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 ------------~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...... ..........+..+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 0000011123567899999999999999999999986
No 224
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.1e-37 Score=326.89 Aligned_cols=251 Identities=23% Similarity=0.287 Sum_probs=188.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||.||+|.. .+++.||+|++.... ......+.++...++.++||||+++++++...+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999996 478999999997543 23334455556667888999999999999999999999
Q ss_pred EecCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecccCCCceeeCCCCceEEecccccccc
Q 002892 660 LEFMPNGSLEKWLYS---HNYFLDMLERLNIMIDVGLALEYLHHSHST-PVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
|||++ |+|.+++.. .+..+++..+..++.|++.|++||| ++ ||+||||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 588887763 4556999999999999999999999 44 6999999999999999999999999999866
Q ss_pred CCCCCcccccccccccccCCcccc----cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYA----SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
.... ......||+.|+|||++ .+..++.++||||+|+++|||++|+.||..................+.
T Consensus 161 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---- 233 (290)
T 3fme_A 161 VDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 233 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred cccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC----
Confidence 4322 22334689999999996 566789999999999999999999999975322222222222111111
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.....++..+.+++.+||+.+|++|||+.|+++
T Consensus 234 -------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 -------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 001123456889999999999999999999987
No 225
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-37 Score=348.00 Aligned_cols=195 Identities=24% Similarity=0.388 Sum_probs=154.7
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee-----CCe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN-----LDF 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~~ 655 (870)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+++.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999865 78999999986532 3445778999999999999999999999843 357
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.|+||||+ +++|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 579999987654 4899999999999999999999 667999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ccccccccccccCCcccc-cCCCcCcccchHhHHHHHHHHHhC
Q 002892 736 GEDDDS-------------------------VTQTMTMATIGYMAPEYA-SDGIISPKCDVYSYGVLLMETFTR 783 (870)
Q Consensus 736 ~~~~~~-------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslG~il~elltg 783 (870)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 432211 123345789999999976 566799999999999999999993
No 226
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2e-37 Score=331.95 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=200.0
Q ss_pred cchhHHHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcC--CCceeEEeeee
Q 002892 575 TSYLDIQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVR--HRNLIKIFSSC 650 (870)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~ 650 (870)
+.+..+....++|++.+.||+|+||.||+|...+++.||+|++.... ....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 34444555667899999999999999999998889999999996542 445678899999999997 59999999999
Q ss_pred eeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccc
Q 002892 651 CNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFG 730 (870)
Q Consensus 651 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 730 (870)
...+..++||| +.+++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++ ++.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeecc
Confidence 99999999999 66889999998654 4899999999999999999999 56799999999999996 4899999999
Q ss_pred cccccCCCCCcccccccccccccCCcccccC-----------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHH
Q 002892 731 ISKLLGEDDDSVTQTMTMATIGYMAPEYASD-----------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKH 799 (870)
Q Consensus 731 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~ 799 (870)
++................|++.|+|||++.+ ..++.++||||||+++|||++|+.||............
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 9987754433333345568999999999865 46888999999999999999999999764322111111
Q ss_pred HHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 800 WIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
+. +......... .++..+.+++.+||+.+|++||++.|+++.
T Consensus 252 ~~------------~~~~~~~~~~-----~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 II------------DPNHEIEFPD-----IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HH------------CTTSCCCCCC-----CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH------------hcccccCCcc-----cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11 1110000000 113468899999999999999999999863
No 227
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-37 Score=334.27 Aligned_cols=260 Identities=19% Similarity=0.246 Sum_probs=204.1
Q ss_pred chhHHHHhhcCCCCC-CeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcC-CCceeEEeeee
Q 002892 576 SYLDIQQATDGFNEC-NLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVR-HRNLIKIFSSC 650 (870)
Q Consensus 576 ~~~~~~~~~~~~~~~-~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 650 (870)
.+.......+.|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++ ||||+++++++
T Consensus 19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~ 98 (327)
T 3lm5_A 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98 (327)
T ss_dssp CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence 344555666778877 89999999999999865 68999999987643 233567889999999994 69999999999
Q ss_pred eeCCeeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEE
Q 002892 651 CNLDFKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARV 726 (870)
Q Consensus 651 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl 726 (870)
...+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| ++||+||||||+||+++. ++.+||
T Consensus 99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEE
Confidence 9999999999999999999998643 456899999999999999999999 667999999999999987 789999
Q ss_pred eccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcC
Q 002892 727 SDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLP 806 (870)
Q Consensus 727 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 806 (870)
+|||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ ...........
T Consensus 176 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~ 251 (327)
T 3lm5_A 176 VDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQVNVD 251 (327)
T ss_dssp CCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCC
T ss_pred eeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhcccc
Confidence 9999998764322 2233568999999999999999999999999999999999999997532211 11111111000
Q ss_pred CchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 807 RGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 807 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. .......++..+.+++.+||+.+|++||++.++++
T Consensus 252 ~---------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 252 Y---------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp C---------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c---------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 00001123456889999999999999999999975
No 228
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.1e-37 Score=332.61 Aligned_cols=263 Identities=23% Similarity=0.338 Sum_probs=186.3
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
....++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 344678999999999999999999854 78999999986543 3345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccc
Q 002892 659 VLEFMPNGSLEKWLYS-------HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGI 731 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 731 (870)
||||+++++|.+++.. ....+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999874 2345899999999999999999999 56799999999999999999999999999
Q ss_pred ccccCCCCC---cccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 002892 732 SKLLGEDDD---SVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPR 807 (870)
Q Consensus 732 a~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 807 (870)
+........ ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||........ . .......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~ 245 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-L-MLTLQNDPP 245 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H-HHHHTSSCC
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-H-HHHhccCCC
Confidence 976643221 111234568999999999875 5689999999999999999999999976432211 1 111111111
Q ss_pred chh-hhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 808 GLT-EVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 808 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... ...+..... .++..+.+++.+||+.||++||++.++++
T Consensus 246 ~~~~~~~~~~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 SLETGVQDKEMLK---------KYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CTTC-----CCCC---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhh---------hhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111 011111111 12346889999999999999999999986
No 229
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.8e-37 Score=338.16 Aligned_cols=274 Identities=20% Similarity=0.248 Sum_probs=203.3
Q ss_pred chhHHHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh-----------hHHHHHHHHHHHHHHhcCCCcee
Q 002892 576 SYLDIQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL-----------ERAFRSFESECEVLRNVRHRNLI 644 (870)
Q Consensus 576 ~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv 644 (870)
...++....++|++.+.||+|+||.||+|...+|+.||||++.... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566778889999999999999999999998889999999985432 22347789999999999999999
Q ss_pred EEeeeeee-----CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC
Q 002892 645 KIFSSCCN-----LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD 719 (870)
Q Consensus 645 ~~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 719 (870)
++++++.. ....++||||++ |++.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 99999854 336799999997 6899998877767999999999999999999999 56699999999999999
Q ss_pred CCCceEEeccccccccCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHH
Q 002892 720 KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLK 798 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~ 798 (870)
.++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~ 244 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLN 244 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHH
T ss_pred CCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 99999999999997543222 2334568999999999876 67899999999999999999999999763221 1222
Q ss_pred HHHHHhcCCchh-----------hhcchhhhcccCcch--HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 799 HWIKLSLPRGLT-----------EVVDASLVREVQPSY--AKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 799 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
............ +.............+ ....++..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 222211111111 111111111111111 01123456889999999999999999999986
No 230
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.1e-37 Score=334.48 Aligned_cols=269 Identities=20% Similarity=0.275 Sum_probs=203.0
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeee--------
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCN-------- 652 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-------- 652 (870)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999997 478999999986543 2223567789999999999999999999876
Q ss_pred CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccc
Q 002892 653 LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGIS 732 (870)
Q Consensus 653 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 732 (870)
.+..++||||+++ ++.+.+......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888888876666999999999999999999999 667999999999999999999999999999
Q ss_pred cccCCCCC--cccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH--hcCC
Q 002892 733 KLLGEDDD--SVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL--SLPR 807 (870)
Q Consensus 733 ~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~--~~~~ 807 (870)
..+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......... ..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCh
Confidence 87643222 222344568999999998876 55899999999999999999999999763222 222222211 1111
Q ss_pred c-hhhhcchhhhc------ccCc----chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 808 G-LTEVVDASLVR------EVQP----SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 808 ~-~~~~~~~~~~~------~~~~----~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. +.......... .... ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1 11111100000 0000 0011112346889999999999999999999986
No 231
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.9e-38 Score=347.34 Aligned_cols=248 Identities=15% Similarity=0.183 Sum_probs=192.1
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeech---hhHHHHHHHHHH---HHHHhcCCCceeEEe-------ee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQ---LERAFRSFESEC---EVLRNVRHRNLIKIF-------SS 649 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 649 (870)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999995 57999999999743 334567788999 555556899999988 55
Q ss_pred eeeCC-----------------eeEEEEecCCCCCHHHHHhhcCC------CCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 002892 650 CCNLD-----------------FKALVLEFMPNGSLEKWLYSHNY------FLDMLERLNIMIDVGLALEYLHHSHSTPV 706 (870)
Q Consensus 650 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~Lh~~~~~~i 706 (870)
+...+ ..|+||||+ +|+|.+++...+. .+++..++.++.||+.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 54443 378999999 6899999985432 2335888899999999999999 6679
Q ss_pred EecccCCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCC-----------CcCcccchHhHHH
Q 002892 707 VHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDG-----------IISPKCDVYSYGV 775 (870)
Q Consensus 707 vH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDvwslG~ 775 (870)
+||||||+||+++.++.+||+|||++...+. ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985422 2234457 999999999877 8999999999999
Q ss_pred HHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 002892 776 LLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDV 855 (870)
Q Consensus 776 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev 855 (870)
++|||++|+.||........ ...+.. .. ..++..+.+++.+||+.||++||++.|+
T Consensus 302 il~elltg~~Pf~~~~~~~~-------------~~~~~~-----~~------~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-------------SEWIFR-----SC------KNIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHHHHHSSCCC------CC-------------SGGGGS-----SC------CCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHHHHHCCCCCcccccccc-------------hhhhhh-----hc------cCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 99999999999965321110 011110 00 1224568899999999999999999999
Q ss_pred HH--HHHHhHhH
Q 002892 856 VV--KLQKIKQT 865 (870)
Q Consensus 856 l~--~L~~i~~~ 865 (870)
++ .++++.+.
T Consensus 358 l~hp~f~~~~~~ 369 (377)
T 3byv_A 358 METPEYEQLRTE 369 (377)
T ss_dssp HTSHHHHHHHHH
T ss_pred hhChHHHHHHHH
Confidence 86 45555443
No 232
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=8.5e-37 Score=348.74 Aligned_cols=251 Identities=24% Similarity=0.299 Sum_probs=200.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh-------------HHHHHHHHHHHHHHhcCCCceeEEee
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE-------------RAFRSFESECEVLRNVRHRNLIKIFS 648 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 648 (870)
..++|++.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999965 688999999875431 23467889999999999999999999
Q ss_pred eeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC---ceE
Q 002892 649 SCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM---TAR 725 (870)
Q Consensus 649 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~---~~k 725 (870)
++.+....++||||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999997654 3899999999999999999999 66799999999999998776 699
Q ss_pred EeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 002892 726 VSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL 805 (870)
Q Consensus 726 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 805 (870)
|+|||++....... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... .....+.....
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~ 264 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKVEKGKY 264 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC
Confidence 99999998764332 233456999999999986 46899999999999999999999999763211 11111111100
Q ss_pred CCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 806 PRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.. +......++..+.+++.+||+.||++|||+.|+++
T Consensus 265 ~~---------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 265 YF---------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CC---------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC---------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 00011123457899999999999999999999975
No 233
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-37 Score=339.89 Aligned_cols=265 Identities=20% Similarity=0.292 Sum_probs=205.3
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHH-----------------HHHHHHHHHHHHhcCCCceeEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERA-----------------FRSFESECEVLRNVRHRNLIKI 646 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 646 (870)
.++|++.+.||+|+||.||+|.. +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 47899999999999999999998 89999999997653221 1778999999999999999999
Q ss_pred eeeeeeCCeeEEEEecCCCCCHHHH------Hhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC
Q 002892 647 FSSCCNLDFKALVLEFMPNGSLEKW------LYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD 719 (870)
Q Consensus 647 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~ 719 (870)
++++...+..++||||+++++|.++ +... ...+++..++.++.|++.||+|||+ .+|++||||||+||+++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMD 186 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEEC
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEc
Confidence 9999999999999999999999998 5542 4569999999999999999999994 16799999999999999
Q ss_pred CCCceEEeccccccccCCCCCcccccccccccccCCcccccCC-CcCc-ccchHhHHHHHHHHHhCCCCCCccccccchH
Q 002892 720 KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDG-IISP-KCDVYSYGVLLMETFTRKKPTDEMFTGEMSL 797 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDvwslG~il~elltg~~p~~~~~~~~~~~ 797 (870)
.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||..........
T Consensus 187 ~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 262 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262 (348)
T ss_dssp TTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHH
T ss_pred CCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH
Confidence 9999999999999876332 23345689999999999877 6666 9999999999999999999997643322211
Q ss_pred HHHHHHh--cCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 798 KHWIKLS--LPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 798 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+.... .+............. ........++..+.+++.+||+.||++||++.|+++
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 263 NNIRTKNIEYPLDRNHFLYPLTNK--KSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHTSCCCCCCCSSSSSTTTTCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhccCcCCccchhhhhcccccc--ccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111110 111000000000000 000011234567899999999999999999999986
No 234
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.8e-37 Score=326.05 Aligned_cols=244 Identities=22% Similarity=0.317 Sum_probs=197.0
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 658 (870)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3567899999999999999999975 79999999997642 34456788899999999 99999999999999999999
Q ss_pred EEecCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC--------------
Q 002892 659 VLEFMPNGSLEKWLYSH---NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN-------------- 721 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-------------- 721 (870)
||||+++++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999854 245899999999999999999999 6679999999999999844
Q ss_pred -----CceEEeccccccccCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccc
Q 002892 722 -----MTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM 795 (870)
Q Consensus 722 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 795 (870)
..+||+|||.+....... ...||+.|+|||++.+. .++.++||||||+++|+|++|..|+... .
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h
Confidence 479999999998764322 23489999999999776 5668999999999999999998776431 1
Q ss_pred hHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 796 SLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
....+.....+. .. ..++..+.+++.+||+.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~-------------~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 QWHEIRQGRLPR-------------IP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp HHHHHHTTCCCC-------------CS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHcCCCCC-------------CC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111111100000 00 112456889999999999999999999975
No 235
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.9e-36 Score=335.16 Aligned_cols=343 Identities=20% Similarity=0.192 Sum_probs=235.5
Q ss_pred CccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccC
Q 002892 25 NNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIP 104 (870)
Q Consensus 25 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~ 104 (870)
+......+..++.+++|++|++++|.+++ +| .++.+++|++|+|++|+|++ +| ++.+++|++|+|++|++++ ++
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee
Confidence 34444455677888888899998888884 45 58888888888888888885 44 8888888888888888885 33
Q ss_pred cCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCC
Q 002892 105 SKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLP 184 (870)
Q Consensus 105 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 184 (870)
++.+++|++|++++|++++ ++ ++.+++|++|++++|++++. .+..+++|++|++++|+..+..+ ...++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~---~~~l~ 170 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD---VTPQT 170 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC---CTTCT
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc---cccCC
Confidence 7888888888888888885 44 78888888888888888763 26677777777777775433321 12345
Q ss_pred ccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccccccccccc
Q 002892 185 NRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCN 264 (870)
Q Consensus 185 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~ 264 (870)
+|+.|++++|++++ +| +..+++|++|++++|++++. .++.+++|+.|++++|+++.++ +..++
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip-----------~~~l~ 233 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID-----------VTPLT 233 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC-----------CTTCT
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC-----------ccccC
Confidence 55555555555554 22 45555555555555555532 2445555555555555554321 33344
Q ss_pred ccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHh
Q 002892 265 KLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQ 344 (870)
Q Consensus 265 ~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 344 (870)
+|+.|++++|++.++. +..+++|+.|++++|
T Consensus 234 ~L~~L~l~~N~l~~~~----------------------------~~~l~~L~~L~l~~n--------------------- 264 (457)
T 3bz5_A 234 QLTYFDCSVNPLTELD----------------------------VSTLSKLTTLHCIQT--------------------- 264 (457)
T ss_dssp TCSEEECCSSCCSCCC----------------------------CTTCTTCCEEECTTC---------------------
T ss_pred CCCEEEeeCCcCCCcC----------------------------HHHCCCCCEEeccCC---------------------
Confidence 4444444444444321 122333444443322
Q ss_pred cCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcc
Q 002892 345 RNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNI 424 (870)
Q Consensus 345 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 424 (870)
+|+.|++++|.+.+.+| +..+++|+.|++++|...+.+|. ..++|+.|++++|
T Consensus 265 ----------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~------ 317 (457)
T 3bz5_A 265 ----------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN------ 317 (457)
T ss_dssp ----------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC------
T ss_pred ----------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc------
Confidence 46678888888876666 56788899999999987777664 3455666666555
Q ss_pred cccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccccc
Q 002892 425 PITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 425 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 495 (870)
++|+.|++++|++++. + ++++++|+.|++++|+|++ ++.|..|++++|.++|.
T Consensus 318 -------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~ 370 (457)
T 3bz5_A 318 -------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE 370 (457)
T ss_dssp -------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE
T ss_pred -------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec
Confidence 6899999999999984 3 9999999999999999985 35788889999999986
No 236
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.4e-37 Score=349.41 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=197.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++......++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457899999999999999999965 68999999997653 23356788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC---CceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN---MTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~~~~ 736 (870)
|||+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.. +.+||+|||++..+.
T Consensus 115 ~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 115 MECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp EECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred EecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 99999999999887654 3899999999999999999999 6679999999999999764 559999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... ......||+.|+|||++. +.++.++||||+||++|+|++|..||...... .....+........
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~-------- 257 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFD-------- 257 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCC--------
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC--------
Confidence 322 233456999999999886 56899999999999999999999999763221 11111111111100
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
......++..+.+++.+||+.+|++|||+.|+++
T Consensus 258 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 258 -------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0001123456889999999999999999999985
No 237
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.3e-38 Score=342.69 Aligned_cols=254 Identities=10% Similarity=0.046 Sum_probs=182.7
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc--CCCceeEEe-------eee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV--RHRNLIKIF-------SSC 650 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~h~niv~~~-------~~~ 650 (870)
...|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.+++.+ +||||++++ +.+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345889999999999999999965 78999999998743 34456677885555555 699988855 333
Q ss_pred eeC-----------------CeeEEEEecCCCCCHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCcE
Q 002892 651 CNL-----------------DFKALVLEFMPNGSLEKWLYSHNYFLDMLER------LNIMIDVGLALEYLHHSHSTPVV 707 (870)
Q Consensus 651 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~Lh~~~~~~iv 707 (870)
... ...++||||++ |+|.+++...+..+++..+ ..++.|++.||+||| +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 322 33799999998 8999999865544566666 788899999999999 66799
Q ss_pred ecccCCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccccC--CCcCcccchHhHHHHHHHHHhCCC
Q 002892 708 HCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASD--GIISPKCDVYSYGVLLMETFTRKK 785 (870)
Q Consensus 708 H~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~ 785 (870)
||||||+||+++.++.+||+|||++...+.. .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999866321 113457799999999987 679999999999999999999999
Q ss_pred CCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 786 PTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 786 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
||.......... .....................++..+.+++.+||+.||++||++.++++
T Consensus 292 Pf~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGS-----------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTC-----------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccc-----------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 998643221100 0000000000000000001123557899999999999999999999975
No 238
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2e-36 Score=334.88 Aligned_cols=335 Identities=20% Similarity=0.214 Sum_probs=233.1
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEE
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIIN 165 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 165 (870)
++++++|++++|.++...+..|..+++|++|++++|.+++..+..+..+++|++|+|++|++++..|..+.++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46666777777766633333356666677777777776655555666666666666666666665556666666666666
Q ss_pred eecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccc
Q 002892 166 LVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLT 245 (870)
Q Consensus 166 l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 245 (870)
+++|+++ ...+..|.++++|++|++++|++++..+..|.++++|++|++++|.++
T Consensus 124 L~~n~l~-------------------------~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 124 LERNDLS-------------------------SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccC-------------------------cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 6666555 233333455666666666666666555556666666666666666665
Q ss_pred cccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCc
Q 002892 246 TETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDL 325 (870)
Q Consensus 246 ~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 325 (870)
.++ +..+++|+.|++++|.+.++ ...++|+.|++++|.+
T Consensus 179 ~~~-----------~~~l~~L~~L~l~~n~l~~~------------------------------~~~~~L~~L~l~~n~l 217 (390)
T 3o6n_A 179 HVD-----------LSLIPSLFHANVSYNLLSTL------------------------------AIPIAVEELDASHNSI 217 (390)
T ss_dssp BCC-----------GGGCTTCSEEECCSSCCSEE------------------------------ECCSSCSEEECCSSCC
T ss_pred ccc-----------cccccccceeeccccccccc------------------------------CCCCcceEEECCCCee
Confidence 431 34456666777776665432 1223577777777777
Q ss_pred cccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCccccc
Q 002892 326 NGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQ 405 (870)
Q Consensus 326 ~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 405 (870)
... |. ...++|+.|+|++|++++. ..+..+++|++|++++|.+++..|..|.
T Consensus 218 ~~~-~~-------------------------~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (390)
T 3o6n_A 218 NVV-RG-------------------------PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFV 269 (390)
T ss_dssp CEE-EC-------------------------CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred eec-cc-------------------------cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcc
Confidence 632 21 1125788888999988854 5788889999999999999888888999
Q ss_pred CCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcccccee
Q 002892 406 NLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRL 485 (870)
Q Consensus 406 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 485 (870)
++++|++|+|++|++++ +|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+|++. | +..+++|+.|
T Consensus 270 ~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L 344 (390)
T 3o6n_A 270 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 344 (390)
T ss_dssp TCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred ccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhccCCEE
Confidence 99999999999999985 57777889999999999999984 677788899999999999999844 3 6778999999
Q ss_pred eccCCcccccCCCCCcccccccccccccccccCCC
Q 002892 486 NVSHNRLEGKIPTNGPFRNFLAQSFLWNYALCGPP 520 (870)
Q Consensus 486 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 520 (870)
++++|+|+|.+.. ..+..+....+..+...|+.+
T Consensus 345 ~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 345 TLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp ECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred EcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 9999999986543 344555555566666667644
No 239
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.2e-37 Score=332.94 Aligned_cols=253 Identities=23% Similarity=0.307 Sum_probs=198.6
Q ss_pred HhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh-hHHHHHHHHHHHH-HHhcCCCceeEEeeeeeeCCeeEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERAFRSFESECEV-LRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
...++|++.+.||+|+||.||+|.. .+|+.||||++.... .....++..|... ++.++||||+++++++...+..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 4457899999999999999999996 478999999997543 2233444555555 777899999999999999999999
Q ss_pred EEecCCCCCHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 659 VLEFMPNGSLEKWLYS---HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
||||+++ +|.+++.. ....+++..++.++.|++.||+|||+. .||+||||||+||+++.++.+||+|||++...
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999975 99988874 455699999999999999999999942 26999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCCccccc----CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYAS----DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
.. ........||+.|+|||++. ...++.++|||||||++|||++|+.||.........+........+.
T Consensus 205 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 277 (340)
T 3an0_A 205 VD---SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 277 (340)
T ss_dssp SC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred cc---ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC----
Confidence 32 12233356899999999964 34788999999999999999999999975322222222211111100
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.....++..+.+++.+||+.+|++||++.|+++
T Consensus 278 -------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 -------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp -------------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -------------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 011123457899999999999999999999976
No 240
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-37 Score=326.44 Aligned_cols=252 Identities=23% Similarity=0.276 Sum_probs=198.3
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh----hHHHHHHHHHHHHHHhcCCCceeEEeeeee--eCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL----ERAFRSFESECEVLRNVRHRNLIKIFSSCC--NLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 655 (870)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999964 68999999997653 234577899999999999999999999984 4567
Q ss_pred eEEEEecCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYS-HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
.++||||++++ +.+++.. ....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 7777764 3456899999999999999999999 66799999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCCcccccCCC--cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASDGI--ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
..............|++.|+|||++.+.. ++.++||||+|+++|||++|+.||..... ......+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~------- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGKGS------- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHCC-------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhcCC-------
Confidence 65433333344556899999999987644 47899999999999999999999975211 11111010000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVK 858 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~ 858 (870)
.. .+..++..+.+++.+||+.||++||++.|+++.
T Consensus 230 --------~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 --------YA---IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --------CC---CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------CC---CCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 001234568899999999999999999999864
No 241
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.9e-37 Score=351.39 Aligned_cols=250 Identities=25% Similarity=0.326 Sum_probs=203.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457899999999999999999965 78999999986543 33457789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee---CCCCceEEeccccccccC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---DKNMTARVSDFGISKLLG 736 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 736 (870)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++..+.
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999998654 4899999999999999999999 6679999999999999 567899999999998764
Q ss_pred CCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDAS 816 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (870)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||...... .....+........
T Consensus 181 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~-------- 247 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFE-------- 247 (484)
T ss_dssp CCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC--------
T ss_pred ccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCC--------
Confidence 332 2334569999999999866 6899999999999999999999999763211 11111111111100
Q ss_pred hhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 817 LVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 817 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
......++..+.+++.+||+.+|++|||+.|+++
T Consensus 248 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 248 -------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0011123456889999999999999999999976
No 242
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.8e-37 Score=341.19 Aligned_cols=201 Identities=25% Similarity=0.375 Sum_probs=167.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC-----C
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL-----D 654 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 654 (870)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3578999999999999999999965 68899999997532 34457789999999999999999999998765 5
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..|+||||++ ++|.+++.... .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 7899999986 59999997653 4899999999999999999999 66799999999999999999999999999987
Q ss_pred cCCCCCc--------------------ccccccccccccCCcccc-cCCCcCcccchHhHHHHHHHHHhCCCCCC
Q 002892 735 LGEDDDS--------------------VTQTMTMATIGYMAPEYA-SDGIISPKCDVYSYGVLLMETFTRKKPTD 788 (870)
Q Consensus 735 ~~~~~~~--------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslG~il~elltg~~p~~ 788 (870)
....... .......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6433221 123456789999999986 56679999999999999999998666554
No 243
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.1e-37 Score=329.60 Aligned_cols=252 Identities=26% Similarity=0.315 Sum_probs=196.8
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--------hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--------ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL 653 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 653 (870)
..++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4467999999999999999999865 68999999986542 12234578999999999999999999998765
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc---eEEeccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT---ARVSDFG 730 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 730 (870)
+ .++||||+++++|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 799999999999999987554 4899999999999999999999 667999999999999987664 9999999
Q ss_pred cccccCCCCCcccccccccccccCCccccc---CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCC
Q 002892 731 ISKLLGEDDDSVTQTMTMATIGYMAPEYAS---DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPR 807 (870)
Q Consensus 731 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 807 (870)
++...... .......||+.|+|||++. ...++.++|||||||++|+|++|..||........ +...+......
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~ 238 (322)
T 2ycf_A 163 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSGKYN 238 (322)
T ss_dssp TCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHTCCC
T ss_pred cceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhCccc
Confidence 99876432 1223456899999999873 56788999999999999999999999976432222 22211111000
Q ss_pred chhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 808 GLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.. ......++..+.+++.+||+.||++||++.++++
T Consensus 239 ~~--------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 239 FI--------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC--------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cC--------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 0001123457899999999999999999999985
No 244
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-37 Score=333.01 Aligned_cols=263 Identities=21% Similarity=0.288 Sum_probs=196.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC-----
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD----- 654 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 654 (870)
..++|++.+.||+|+||.||+|... +|+.||||++.... ....+++.+|++++++++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3568999999999999999999964 79999999985532 344567889999999999999999999987653
Q ss_pred -eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 655 -FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 655 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
..|+||||+ +++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 459999999 88999999864 3899999999999999999999 6679999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCC-chh
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPR-GLT 810 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~ 810 (870)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ...+..+.... .+. ...
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH-LDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHH
Confidence 75432 233468999999999877 6799999999999999999999999976322 12222222211 111 010
Q ss_pred hhcc--------hhhhcccCcchH--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 811 EVVD--------ASLVREVQPSYA--KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 811 ~~~~--------~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+. ..+.......+. ...++..+.+++.+|++.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 000000000000 0123457899999999999999999999987
No 245
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.5e-37 Score=324.67 Aligned_cols=266 Identities=22% Similarity=0.310 Sum_probs=201.4
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhh--HHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEEEe
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 661 (870)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... .....+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 67899999999999999999965 789999999865432 223668899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCC
Q 002892 662 FMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDD 740 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 740 (870)
|++ ++|.+++.... ..+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||.+.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 69999998553 45899999999999999999999 6679999999999999999999999999998764322
Q ss_pred cccccccccccccCCcccccCCC-cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCCc--hhhhc---
Q 002892 741 SVTQTMTMATIGYMAPEYASDGI-ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLPRG--LTEVV--- 813 (870)
Q Consensus 741 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~~--~~~~~--- 813 (870)
.......+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||...... ......... ..+.. +....
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcCc
Confidence 1223346899999999998765 789999999999999999999999763221 122222221 11111 00000
Q ss_pred --chhhhcccCcchH--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 814 --DASLVREVQPSYA--KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 814 --~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
............. ....+..+.+++.+|++.||++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000000 0123457889999999999999999999986
No 246
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=340.18 Aligned_cols=266 Identities=21% Similarity=0.341 Sum_probs=203.6
Q ss_pred hhHHHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC
Q 002892 577 YLDIQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD 654 (870)
Q Consensus 577 ~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 654 (870)
..+.....++|++.+.||+|+||.||+|+..+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34445567889999999999999999998653 59999986542 223355778999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..++||||+++++|.+++...+..+++..++.++.|++.||+||| +++++||||||+||+++ ++.+||+|||++..
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 999999999999999999877767999999999999999999999 56799999999999998 68999999999876
Q ss_pred cCCCC---CcccccccccccccCCcccccC---------CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHH
Q 002892 735 LGEDD---DSVTQTMTMATIGYMAPEYASD---------GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIK 802 (870)
Q Consensus 735 ~~~~~---~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~ 802 (870)
..... .........|++.|+|||++.+ ..++.++||||||+++|||++|+.||....... ......
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~ 256 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQMG 256 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHHH
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhc
Confidence 53211 1122233458999999999864 457889999999999999999999997532211 111111
Q ss_pred HhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 803 LSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
...... .....++..+.+++..||+.+|++||++.++++.|+++.+..
T Consensus 257 ~~~~~~----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 257 TGMKPN----------------LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TTCCCC----------------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred cCCCCC----------------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 000000 000012345889999999999999999999999999988764
No 247
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=333.95 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=198.8
Q ss_pred cchhHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeee
Q 002892 575 TSYLDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCN 652 (870)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 652 (870)
..+.++....++|++.+.||+|+||.||+|+.. +++.||+|++..... ....+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344455567789999999999999999999964 789999999875532 346788999999999 79999999999976
Q ss_pred ------CCeeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceE
Q 002892 653 ------LDFKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTAR 725 (870)
Q Consensus 653 ------~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~k 725 (870)
.+..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 46789999999999999999864 356899999999999999999999 56699999999999999999999
Q ss_pred EeccccccccCCCCCcccccccccccccCCccccc-----CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHH
Q 002892 726 VSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYAS-----DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHW 800 (870)
Q Consensus 726 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~ 800 (870)
|+|||++....... .......|++.|+|||++. +..++.++|||||||++|+|++|+.||....... ....+
T Consensus 170 l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~ 246 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLI 246 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHH
T ss_pred EeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHh
Confidence 99999998664321 1223446899999999986 5678899999999999999999999996532111 11111
Q ss_pred HHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 801 IKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.....+. .....++..+.+++.+||+.+|++||++.++++
T Consensus 247 ~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPAPR-----------------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCCCC-----------------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCcccc-----------------CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1100000 000112346889999999999999999999987
No 248
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.2e-36 Score=323.71 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=203.3
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---------hHHHHHHHHHHHHHHhcC-CCceeEEeeee
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---------ERAFRSFESECEVLRNVR-HRNLIKIFSSC 650 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 650 (870)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 44678999999999999999999975 68999999986542 233567889999999995 99999999999
Q ss_pred eeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccc
Q 002892 651 CNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFG 730 (870)
Q Consensus 651 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 730 (870)
...+..++||||+++++|.+++.... .+++..+..++.|++.||+||| ++|++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999998653 4899999999999999999999 6679999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCCccccc------CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 002892 731 ISKLLGEDDDSVTQTMTMATIGYMAPEYAS------DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS 804 (870)
Q Consensus 731 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 804 (870)
.+....... ......|++.|+|||++. ...++.++||||+|+++|+|++|+.||...... ..........
T Consensus 170 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~ 245 (298)
T 1phk_A 170 FSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGN 245 (298)
T ss_dssp TCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTC
T ss_pred chhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-HHHHHHhcCC
Confidence 998764322 223346899999999885 456889999999999999999999999653211 1111111110
Q ss_pred cCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 805 LPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... .......++..+.+++.+||+.+|++||++.|+++
T Consensus 246 ~~~---------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 246 YQF---------------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCC---------------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccc---------------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 000 00001123457899999999999999999999975
No 249
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.5e-37 Score=360.18 Aligned_cols=262 Identities=21% Similarity=0.331 Sum_probs=208.7
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEec----CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLF----DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 655 (870)
....++|++.+.||+|+||.||+|.+. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. .+.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 344577899999999999999999864 24579999987543 344577899999999999999999999985 466
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.++||||+++|+|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 89999999999999999977767999999999999999999999 567999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhhcc
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (870)
..... .......+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .....+......
T Consensus 542 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~~------- 611 (656)
T 2j0j_A 542 EDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERL------- 611 (656)
T ss_dssp CC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCCC-------
T ss_pred CCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCCC-------
Confidence 43322 22233456789999999998899999999999999999997 99998763221 111111110000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
..+..++..+.+++.+||+.||++||++.++++.|+++.+..
T Consensus 612 ----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 612 ----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 001123557899999999999999999999999999997764
No 250
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.8e-36 Score=330.63 Aligned_cols=260 Identities=19% Similarity=0.209 Sum_probs=193.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC------
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD------ 654 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 654 (870)
.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 478999999999999999999865 68999999997542 344567889999999999999999999987654
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 77999999974 78888753 3899999999999999999999 66799999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc------
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG------ 808 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 808 (870)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+..... .....
T Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~-~~~~~~~~~~~ 251 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIE-QLGTPCPEFMK 251 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC--CCCCCHHHHT
T ss_pred cccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HhCCCCHHHHH
Confidence 5422 1233456899999999999999999999999999999999999999763211 11111111 00000
Q ss_pred --------------------hhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 809 --------------------LTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 809 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+...+..... ..........+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLF--PADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGS--CCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccC--cccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000000 0011122334678999999999999999999999986
No 251
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-37 Score=336.93 Aligned_cols=254 Identities=23% Similarity=0.274 Sum_probs=199.9
Q ss_pred hcCCCCCCeeccccceeEEEEEe----cCCcEEEEEEeechh----hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCC
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLD 654 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 654 (870)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ......+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999986 378999999986532 12334567899999999 6999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999998654 4899999999999999999999 66799999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCcccccC--CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASD--GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...+....
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~-------- 278 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRI-------- 278 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHH--------
T ss_pred cccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHH--------
Confidence 53222 222334569999999999986 3478899999999999999999999975322211 11111110
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-----CMTDVVVK 858 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-----s~~evl~~ 858 (870)
...... .+..++..+.+++.+||+.||++|| ++.|+++.
T Consensus 279 ----~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 279 ----LKSEPP---YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----HHCCCC---CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----hccCCC---CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 000000 0012244688999999999999999 89998764
No 252
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.7e-37 Score=337.81 Aligned_cols=265 Identities=19% Similarity=0.247 Sum_probs=196.0
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee-------
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN------- 652 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------- 652 (870)
....++|++.+.||+|+||+||+|.. .+|+.||+|++...... ..+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44567899999999999999999986 47999999998654322 3469999999999999999999843
Q ss_pred -------------------------------CCeeEEEEecCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHH
Q 002892 653 -------------------------------LDFKALVLEFMPNGSLEKWLY---SHNYFLDMLERLNIMIDVGLALEYL 698 (870)
Q Consensus 653 -------------------------------~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~L 698 (870)
....++||||++ |+|.+.+. .....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334789999997 58877776 3345699999999999999999999
Q ss_pred HhcCCCCcEecccCCCceeeC-CCCceEEeccccccccCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHH
Q 002892 699 HHSHSTPVVHCNLKPNNILLD-KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVL 776 (870)
Q Consensus 699 h~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~i 776 (870)
| ++||+||||||+||+++ .++.+||+|||++....... ......||+.|+|||++.+. .++.++||||+||+
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 77799999999999997 68999999999998764332 22334689999999998765 48999999999999
Q ss_pred HHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcc--hhhh-----cccCcch---HHHHHHHHHHHHHhhccCCCC
Q 002892 777 LMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD--ASLV-----REVQPSY---AKMDCLLRIMHLALGCCMDSP 846 (870)
Q Consensus 777 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~---~~~~~~~~l~~l~~~cl~~~P 846 (870)
+|||++|+.||..... ...+..++...-......+.. .... ......+ .+..++..+.+++.+||+.+|
T Consensus 232 l~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999976322 222333322211111110000 0000 0000000 011234568999999999999
Q ss_pred CCCCCHHHHHH
Q 002892 847 EQRMCMTDVVV 857 (870)
Q Consensus 847 ~~RPs~~evl~ 857 (870)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999984
No 253
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-36 Score=338.67 Aligned_cols=198 Identities=23% Similarity=0.300 Sum_probs=171.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhc------CCCceeEEeeeeeeCCe
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNV------RHRNLIKIFSSCCNLDF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~ 655 (870)
...+|++.+.||+|+||.||+|... +++.||||+++... .....+.+|+++++.+ .|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 3467999999999999999999865 58999999997643 3345677788888877 57799999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc--eEEeccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT--ARVSDFGIS 732 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a 732 (870)
.++||||++ ++|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999996 69999988654 45899999999999999999999 556999999999999999887 999999999
Q ss_pred cccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcc
Q 002892 733 KLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEM 790 (870)
Q Consensus 733 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~ 790 (870)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 765322 22346899999999999999999999999999999999999999763
No 254
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-36 Score=332.63 Aligned_cols=271 Identities=21% Similarity=0.262 Sum_probs=203.9
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC----
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL---- 653 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---- 653 (870)
+....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp BCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred eccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 3344578999999999999999999865 68899999997543 34457788999999999999999999998654
Q ss_pred -CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccc
Q 002892 654 -DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGIS 732 (870)
Q Consensus 654 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 732 (870)
...++||||++ |+|.+++.... +++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~~iv~e~~~-~~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 102 MKDVYIVQDLME-TDLYKLLKTQH--LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CCCEEEEEECCS-EEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred cceEEEEEcccC-cCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence 36799999997 59999987654 899999999999999999999 667999999999999999999999999999
Q ss_pred cccCCCCCc-ccccccccccccCCccccc-CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc--
Q 002892 733 KLLGEDDDS-VTQTMTMATIGYMAPEYAS-DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG-- 808 (870)
Q Consensus 733 ~~~~~~~~~-~~~~~~~g~~~y~aPE~~~-~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 808 (870)
......... .......||+.|+|||++. ...++.++||||+||++|||++|+.||...... ..+.......-...
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHILGILGSPSQE 254 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHHHHHCSCCHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHHHhCCCCHH
Confidence 876432221 1123457899999999865 455899999999999999999999999764322 22222222111110
Q ss_pred -hhhhcchh-------hhcccCcch--HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 809 -LTEVVDAS-------LVREVQPSY--AKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 809 -~~~~~~~~-------~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+....+.. ........+ ....++..+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 10000000 000000000 00123457899999999999999999999976
No 255
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.6e-36 Score=355.67 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=202.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKA 657 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 657 (870)
..++|++.+.||+|+||.||+|+.. +++.||||++++.. ......+..|..++..+ +||+|+.+++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999965 68899999998643 23346678899999887 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCC
Q 002892 658 LVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGE 737 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 737 (870)
+||||+++|+|.+++...+. +++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||++.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999999986543 899999999999999999999 66799999999999999999999999999986432
Q ss_pred CCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhh
Q 002892 738 DDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASL 817 (870)
Q Consensus 738 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 817 (870)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~--------------- 556 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIME--------------- 556 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHS---------------
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHHHHh---------------
Confidence 22 223446799999999999999999999999999999999999999976311 111111110
Q ss_pred hcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002892 818 VREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCM-----TDVVV 857 (870)
Q Consensus 818 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~-----~evl~ 857 (870)
.... + +...+.++.+++.+||+.||++||++ .||++
T Consensus 557 -~~~~--~-p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 557 -HNVA--Y-PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -SCCC--C-CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -CCCC--C-CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0000 0 01234568999999999999999997 56543
No 256
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-36 Score=351.25 Aligned_cols=335 Identities=20% Similarity=0.213 Sum_probs=240.6
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEE
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIIN 165 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 165 (870)
+.+++.|++++|.+....+..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666677777766644334456666677777777777666666666666676666666666665555566666666666
Q ss_pred eecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccc
Q 002892 166 LVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLT 245 (870)
Q Consensus 166 l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 245 (870)
|++|.++ +..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++
T Consensus 130 L~~n~l~-------------------------~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 130 LERNDLS-------------------------SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCCCC-------------------------CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 6666555 333344556666666666666666656666666666666666666665
Q ss_pred cccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCc
Q 002892 246 TETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDL 325 (870)
Q Consensus 246 ~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l 325 (870)
.++ +..+++|+.|++++|.+.++ ....+|+.|++++|.+
T Consensus 185 ~~~-----------~~~l~~L~~L~l~~n~l~~l------------------------------~~~~~L~~L~ls~n~l 223 (597)
T 3oja_B 185 HVD-----------LSLIPSLFHANVSYNLLSTL------------------------------AIPIAVEELDASHNSI 223 (597)
T ss_dssp BCC-----------GGGCTTCSEEECCSSCCSEE------------------------------ECCTTCSEEECCSSCC
T ss_pred CcC-----------hhhhhhhhhhhcccCccccc------------------------------cCCchhheeeccCCcc
Confidence 432 34456666777776665432 1223577777777777
Q ss_pred cccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCccccc
Q 002892 326 NGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQ 405 (870)
Q Consensus 326 ~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 405 (870)
....+. + .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|.
T Consensus 224 ~~~~~~------------------------~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 224 NVVRGP------------------------V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp CEEECS------------------------C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cccccc------------------------c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 632211 1 1478899999999985 46788899999999999999988899999
Q ss_pred CCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcccccee
Q 002892 406 NLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRL 485 (870)
Q Consensus 406 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 485 (870)
++++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L 350 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 350 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred CccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEE
Confidence 99999999999999986 5777888999999999999998 5777889999999999999999854 3 6678999999
Q ss_pred eccCCcccccCCCCCcccccccccccccccccCCC
Q 002892 486 NVSHNRLEGKIPTNGPFRNFLAQSFLWNYALCGPP 520 (870)
Q Consensus 486 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 520 (870)
+|++|+|+|.++. ..+..+....+.++...|+.+
T Consensus 351 ~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 351 TLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp ECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred EeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 9999999998653 356666666778888888865
No 257
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-36 Score=324.79 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=193.1
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee---------
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN--------- 652 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 652 (870)
..++|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3467899999999999999999964 7899999999754 3445778999999999999999999998865
Q ss_pred ----CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEec
Q 002892 653 ----LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 653 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
.+..++||||+++|+|.+++...+..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 35678999999999999999977667899999999999999999999 56699999999999999999999999
Q ss_pred cccccccCCCCC------------cccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccc
Q 002892 729 FGISKLLGEDDD------------SVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM 795 (870)
Q Consensus 729 fg~a~~~~~~~~------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 795 (870)
||.+........ ........|++.|+|||++.+. .++.++||||+|+++|||++ ||........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~ 236 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN 236 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence 999987643211 1122345689999999999764 68999999999999999998 5543111111
Q ss_pred hHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 796 SLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.... .... ..... ......++..+.+++..||+.||++||++.++++
T Consensus 237 ~~~~-~~~~-~~~~~-------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 237 ILKK-LRSV-SIEFP-------------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHH-HHST-TCCCC-------------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHh-cccc-ccccC-------------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111 0000 00000 0001123446889999999999999999999986
No 258
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.7e-36 Score=336.87 Aligned_cols=264 Identities=21% Similarity=0.269 Sum_probs=199.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC--------CCceeEEeeeee---
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR--------HRNLIKIFSSCC--- 651 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~--- 651 (870)
.++|++.+.||+|+||+||+|+.. +++.||||+++.. ......+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 478999999999999999999854 6889999999754 334567889999999985 788999999987
Q ss_pred -eCCeeEEEEecCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecccCCCceeeCCCC------
Q 002892 652 -NLDFKALVLEFMPNGSLEKWLYS-HNYFLDMLERLNIMIDVGLALEYLHHSHST-PVVHCNLKPNNILLDKNM------ 722 (870)
Q Consensus 652 -~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~~~~------ 722 (870)
.....++||||+ ++++.+++.. ....+++..+..++.||+.||+||| ++ ||+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 456889999999 5566666554 3456999999999999999999999 55 799999999999998775
Q ss_pred -------------------------------------------ceEEeccccccccCCCCCcccccccccccccCCcccc
Q 002892 723 -------------------------------------------TARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYA 759 (870)
Q Consensus 723 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~ 759 (870)
.+||+|||.+...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999876432 2334689999999999
Q ss_pred cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc-----hHHHHHHHh--cCCch-------hhhcchhh-hccc---
Q 002892 760 SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM-----SLKHWIKLS--LPRGL-------TEVVDASL-VREV--- 821 (870)
Q Consensus 760 ~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~-----~~~~~~~~~--~~~~~-------~~~~~~~~-~~~~--- 821 (870)
.+..++.++|||||||++|||++|+.||........ .+....... .+... .+.+.... ....
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999976433221 111111110 01000 00000000 0000
Q ss_pred ----------CcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 822 ----------QPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 822 ----------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
........++..+.+++.+||+.||++|||+.|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000012345678999999999999999999999975
No 259
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=325.46 Aligned_cols=266 Identities=20% Similarity=0.280 Sum_probs=195.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeee-----------
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCC----------- 651 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----------- 651 (870)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999976 58999999998776677788999999999999999999998873
Q ss_pred ---eCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC-CCCceEEe
Q 002892 652 ---NLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-KNMTARVS 727 (870)
Q Consensus 652 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 727 (870)
.....++||||++ |+|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 6999999753 4899999999999999999999 56799999999999997 56799999
Q ss_pred ccccccccCCCCC-cccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 002892 728 DFGISKLLGEDDD-SVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL 805 (870)
Q Consensus 728 Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 805 (870)
|||++........ ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ........ ..
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~~-~~ 241 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLILE-SI 241 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-HS
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-hc
Confidence 9999987643211 112233457899999998865 67899999999999999999999999763221 11111111 11
Q ss_pred CCc----hhhh-------cchhhhcccCc-chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 806 PRG----LTEV-------VDASLVREVQP-SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 806 ~~~----~~~~-------~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+.. ..++ ..........+ ......++..+.+++.+||+.||++||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 110 0000 00000000000 0001124567899999999999999999999976
No 260
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8e-37 Score=333.26 Aligned_cols=263 Identities=20% Similarity=0.294 Sum_probs=184.9
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC------
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL------ 653 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 653 (870)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 357899999999999999999985 478999999986532 34456788999999999999999999998654
Q ss_pred CeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
...|+|+||+ +++|.+++... .+++..+..++.||++||+||| +.||+||||||+||+++.++.+||+|||+++
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 5679999999 78999988763 4899999999999999999999 6679999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCc--h
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPRG--L 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~--~ 809 (870)
..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ...+..+.... .+.. +
T Consensus 181 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred ccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 65322 233568999999999877 6789999999999999999999999976322 12222222211 1110 0
Q ss_pred hhhcc-------hhhhcccCcchH--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 TEVVD-------ASLVREVQPSYA--KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ~~~~~-------~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+.. ..+.......+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 01100 000000011110 0122456899999999999999999999976
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.8e-36 Score=318.76 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=201.9
Q ss_pred HhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEE
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 658 (870)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999975 78999999997653 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC---CceEEecccccccc
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN---MTARVSDFGISKLL 735 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~~~ 735 (870)
||||+++++|.+++...+ .+++..++.++.|++.||+||| ++|++||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999999987654 4899999999999999999999 6679999999999999764 47999999999876
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
..... .....|++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... .....+.....+..
T Consensus 175 ~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~------- 242 (287)
T 2wei_A 175 QQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYAFD------- 242 (287)
T ss_dssp CCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-------
T ss_pred cCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCC-------
Confidence 43322 223357899999998865 4889999999999999999999999763211 11111111111000
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
......++..+.+++.+||+.+|++||++.|+++
T Consensus 243 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 243 --------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp --------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0011123456889999999999999999999987
No 262
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6.4e-36 Score=324.56 Aligned_cols=265 Identities=20% Similarity=0.284 Sum_probs=203.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-c-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc------eeEEeeeeeeCC
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-F-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN------LIKIFSSCCNLD 654 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 654 (870)
..++|++.+.||+|+||.||+|.. . +++.||+|+++.. ......+.+|+++++.++|++ ++++++++...+
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 346899999999999999999986 3 6889999999754 344567889999999987654 999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC-------------
Q 002892 655 FKALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK------------- 720 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~------------- 720 (870)
..++||||+ +++|.+++...+ ..+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 899999998654 35899999999999999999999 667999999999999987
Q ss_pred ------CCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc
Q 002892 721 ------NMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE 794 (870)
Q Consensus 721 ------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~ 794 (870)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|..||......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 240 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK- 240 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH-
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-
Confidence 668999999999865332 22346899999999999999999999999999999999999999763221
Q ss_pred chHHHHHHH--hcCCchhhhc-----------------------chhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCC
Q 002892 795 MSLKHWIKL--SLPRGLTEVV-----------------------DASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQR 849 (870)
Q Consensus 795 ~~~~~~~~~--~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 849 (870)
.....+... ..+..+.... ................++..+.+++.+||+.||++|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 111111111 1111110000 000000000000112346789999999999999999
Q ss_pred CCHHHHHHH
Q 002892 850 MCMTDVVVK 858 (870)
Q Consensus 850 Ps~~evl~~ 858 (870)
||+.|+++.
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999853
No 263
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.2e-36 Score=327.82 Aligned_cols=268 Identities=23% Similarity=0.269 Sum_probs=200.4
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC-----Ce
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNL-----DF 655 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~~ 655 (870)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4578999999999999999999965 68999999986533 34456788999999999999999999987654 67
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.++||||++ ++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999996 6999998764 4899999999999999999999 667999999999999999999999999999876
Q ss_pred CCCCCcc--------cccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHH-Hhc
Q 002892 736 GEDDDSV--------TQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIK-LSL 805 (870)
Q Consensus 736 ~~~~~~~--------~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~-~~~ 805 (870)
....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 4322111 1223468999999998754 778999999999999999999999997632211 1111111 111
Q ss_pred CCc---hhhhcchh-------hhcccCcc--hHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 806 PRG---LTEVVDAS-------LVREVQPS--YAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 806 ~~~---~~~~~~~~-------~~~~~~~~--~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+.. ........ +....... .....++..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 110 00000000 00000000 001134567899999999999999999999986
No 264
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.9e-36 Score=332.64 Aligned_cols=263 Identities=22% Similarity=0.319 Sum_probs=193.7
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCC------eeE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLD------FKA 657 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------~~~ 657 (870)
..+|++.+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 457999999999999999999987777799998765432 2246999999999999999999985433 378
Q ss_pred EEEecCCCCCHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC-CCCceEEeccccccc
Q 002892 658 LVLEFMPNGSLEKWLY--SHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-KNMTARVSDFGISKL 734 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~ 734 (870)
+||||++++.+..... .....+++..+..++.|+++||+||| ++||+||||||+||+++ .++.+||+|||++..
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998754443332 23456999999999999999999999 66799999999999998 789999999999987
Q ss_pred cCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCc-hhh
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPRG-LTE 811 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~ 811 (870)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+... ...+..+.... .+.. ...
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHH
T ss_pred ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 643322 2234689999999998765 589999999999999999999999976322 22233332211 1111 000
Q ss_pred hcchhhhcc-----cCcchH---HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVRE-----VQPSYA---KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~-----~~~~~~---~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..++..... ....+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000000000 000000 0113457899999999999999999999986
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.9e-36 Score=324.19 Aligned_cols=268 Identities=24% Similarity=0.330 Sum_probs=200.0
Q ss_pred HhhcCCCCCCeeccccceeEEEEEe--cCCcEEEEEEeechhh--HHHHHHHHHHHHHHhc---CCCceeEEeeeee---
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTL--FDGTNVAIKVFNLQLE--RAFRSFESECEVLRNV---RHRNLIKIFSSCC--- 651 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~--- 651 (870)
...++|++.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+++++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999997 3688999999875432 1123455677766666 8999999999987
Q ss_pred --eCCeeEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEec
Q 002892 652 --NLDFKALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSD 728 (870)
Q Consensus 652 --~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~D 728 (870)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999997 69999998643 44899999999999999999999 66799999999999999999999999
Q ss_pred cccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCC
Q 002892 729 FGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLPR 807 (870)
Q Consensus 729 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~ 807 (870)
||++..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..+...... ..+.
T Consensus 164 fg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred CcccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCC
Confidence 999986532 12233456899999999999999999999999999999999999999763221 122222211 1111
Q ss_pred c--hhhhc---chhhhcccCc--chHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 808 G--LTEVV---DASLVREVQP--SYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 808 ~--~~~~~---~~~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. +.... .......... ......++..+.+++.+||+.||++||++.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 00000 0000000000 0001123457889999999999999999999985
No 266
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.6e-35 Score=326.18 Aligned_cols=202 Identities=25% Similarity=0.312 Sum_probs=172.3
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CC-----ceeEEeeeeeeC
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HR-----NLIKIFSSCCNL 653 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~ 653 (870)
....++|++.+.||+|+||.||+|... +++.||||+++... .....+..|+++++.++ |+ +++++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 344678999999999999999999865 68899999997543 33466778888888875 44 499999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC--CCCceEEeccc
Q 002892 654 DFKALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD--KNMTARVSDFG 730 (870)
Q Consensus 654 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg 730 (870)
+..++||||++ ++|.+++.... ..+++..+..++.|++.||+|||.. ..||+||||||+||+++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 99999999996 59999998653 4589999999999999999999942 36799999999999995 47889999999
Q ss_pred cccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcc
Q 002892 731 ISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEM 790 (870)
Q Consensus 731 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~ 790 (870)
++...+.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 207 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 207 SSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Cceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99876432 22346899999999999999999999999999999999999999763
No 267
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3e-35 Score=325.35 Aligned_cols=336 Identities=21% Similarity=0.208 Sum_probs=207.7
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEE
Q 002892 38 LRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLN 117 (870)
Q Consensus 38 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 117 (870)
+.+++.|++++|.++...+..+..+++|++|+|++|.|++..+..+..+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45666666666666643334456666666666666666655555666666666666666666655555566666666666
Q ss_pred eecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccc
Q 002892 118 FADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLT 197 (870)
Q Consensus 118 l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 197 (870)
+++|+++...+..+.++++|++|++++|++++..+..+..+++|++|++++|+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------------------------- 178 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT------------------------- 178 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS-------------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC-------------------------
Confidence 6666666333333455566666666555555444444444444444444444433
Q ss_pred cccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCC
Q 002892 198 GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLD 277 (870)
Q Consensus 198 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (870)
+. .+..+++|+.|++++|.++.+ ...++|++|++++|++.
T Consensus 179 ------------------------~~---~~~~l~~L~~L~l~~n~l~~~-------------~~~~~L~~L~l~~n~l~ 218 (390)
T 3o6n_A 179 ------------------------HV---DLSLIPSLFHANVSYNLLSTL-------------AIPIAVEELDASHNSIN 218 (390)
T ss_dssp ------------------------BC---CGGGCTTCSEEECCSSCCSEE-------------ECCSSCSEEECCSSCCC
T ss_pred ------------------------cc---ccccccccceeeccccccccc-------------CCCCcceEEECCCCeee
Confidence 21 122333344444444433321 11234555555555544
Q ss_pred CCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCccccc
Q 002892 278 SILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLS 357 (870)
Q Consensus 278 ~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~ 357 (870)
.+.. ...++|+.|++++|.+.+. ..+.
T Consensus 219 ~~~~----------------------------~~~~~L~~L~l~~n~l~~~-------------------------~~l~ 245 (390)
T 3o6n_A 219 VVRG----------------------------PVNVELTILKLQHNNLTDT-------------------------AWLL 245 (390)
T ss_dssp EEEC----------------------------CCCSSCCEEECCSSCCCCC-------------------------GGGG
T ss_pred eccc----------------------------cccccccEEECCCCCCccc-------------------------HHHc
Confidence 3210 0124566777777766531 1245
Q ss_pred CccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEE
Q 002892 358 SLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITL 437 (870)
Q Consensus 358 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 437 (870)
.+++|++|+|++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 56778888888888887778888888888888888888884 5667778889999999999988 466678888899999
Q ss_pred EcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 438 SLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 438 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
+|++|.+++. | +..+++|+.|+|++|.+++.- ...-+..+....+.++...|..|.
T Consensus 324 ~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~--~~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 324 YLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNS--LRALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHH--HHHHTTTCCTTTBCCCCSCCCTTC
T ss_pred ECCCCcccee-C--chhhccCCEEEcCCCCccchh--HHHHHHHHHhhcccccCceecccc
Confidence 9999998764 3 778889999999999988532 223345566666777776666553
No 268
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.7e-36 Score=327.09 Aligned_cols=262 Identities=21% Similarity=0.274 Sum_probs=197.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCee---
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFK--- 656 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 656 (870)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4578999999999999999999865 68999999997642 34457788999999999999999999999876654
Q ss_pred ---EEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 657 ---ALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 657 ---~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 688887743 3899999999999999999999 5679999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh-cCCc-hh
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS-LPRG-LT 810 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~-~~ 810 (870)
..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ..+....... .+.. ..
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHH
Confidence 65322 233468999999999877 67899999999999999999999999763221 1222222211 1110 10
Q ss_pred hhcc--------hhhhcccCcchH--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 811 EVVD--------ASLVREVQPSYA--KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 811 ~~~~--------~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.... ..+.......+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0000 000000000000 1123567899999999999999999999975
No 269
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.7e-36 Score=335.69 Aligned_cols=260 Identities=22% Similarity=0.295 Sum_probs=192.9
Q ss_pred cCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeC------CeeE
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNL------DFKA 657 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~~ 657 (870)
.+|++.+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 689999999865432 234699999999999999999988532 2367
Q ss_pred EEEecCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC-CceEEecccccc
Q 002892 658 LVLEFMPNGSLEKWLY---SHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN-MTARVSDFGISK 733 (870)
Q Consensus 658 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~ 733 (870)
+||||+++ ++.+.+. .....+++..+..++.||++||+||| +++|+||||||+||+++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999975 6666554 33456999999999999999999999 7779999999999999965 568999999998
Q ss_pred ccCCCCCcccccccccccccCCcccccCC-CcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc---h
Q 002892 734 LLGEDDDSVTQTMTMATIGYMAPEYASDG-IISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG---L 809 (870)
Q Consensus 734 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 809 (870)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.+... ...+..++...-... +
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 7643322 2234689999999998764 789999999999999999999999976322 222333332111110 1
Q ss_pred hhhcchhhh-----cccCcchH---HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 810 TEVVDASLV-----REVQPSYA---KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 810 ~~~~~~~~~-----~~~~~~~~---~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+ +.... ......+. ....+..+.+++.+||+.||++||++.|+++
T Consensus 282 ~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Hhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 100 00000 00000000 0122457899999999999999999999975
No 270
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=334.73 Aligned_cols=267 Identities=19% Similarity=0.242 Sum_probs=182.8
Q ss_pred cCCCC-CCeeccccceeEEEEEec---CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee--CCeeEE
Q 002892 585 DGFNE-CNLLGAGSFGSVYKGTLF---DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN--LDFKAL 658 (870)
Q Consensus 585 ~~~~~-~~~lg~G~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~l 658 (870)
+.|++ .++||+|+||.||+|+.. +++.||+|++..... ...+.+|++++++++||||+++++++.. ....++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34555 458999999999999965 578999999875432 2467889999999999999999999954 678899
Q ss_pred EEecCCCCCHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee----CCCCceEE
Q 002892 659 VLEFMPNGSLEKWLYSH--------NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL----DKNMTARV 726 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill----~~~~~~kl 726 (870)
||||++ ++|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 5888877622 124899999999999999999999 6669999999999999 67789999
Q ss_pred eccccccccCCCCC-cccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccc--------cch
Q 002892 727 SDFGISKLLGEDDD-SVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTG--------EMS 796 (870)
Q Consensus 727 ~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~--------~~~ 796 (870)
+|||++..+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ...
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643221 122344578999999999887 45899999999999999999999999753221 112
Q ss_pred HHHHHHH-hcCCc--hhhhcc--------hhhhcccCcchHHH--------HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 797 LKHWIKL-SLPRG--LTEVVD--------ASLVREVQPSYAKM--------DCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 797 ~~~~~~~-~~~~~--~~~~~~--------~~~~~~~~~~~~~~--------~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+..+... ..+.. +..+.. .............. .....+.+++.+||+.||++|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 2222221 11111 111100 00000000000000 01346789999999999999999999976
No 271
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=321.91 Aligned_cols=253 Identities=23% Similarity=0.270 Sum_probs=182.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
..++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.++..+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 3567889999999999999999975 78999999997643 22234455556678888999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+ ++.+..+.......+++..+..++.|++.||+|||+. .|++||||||+||+++.++.+||+|||++.......
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9999 5666666665556699999999999999999999942 269999999999999999999999999997653322
Q ss_pred CcccccccccccccCCccccc-----CCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcc
Q 002892 740 DSVTQTMTMATIGYMAPEYAS-----DGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVD 814 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (870)
......|++.|+|||++. ...++.++||||||+++|||++|+.||................. +....
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~---- 251 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE-PPLLP---- 251 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC-CCCCC----
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC-CCCCC----
Confidence 223346899999999984 45688999999999999999999999975322221111111110 00000
Q ss_pred hhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 815 ASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
....++..+.+++.+||+.||++||++.++++
T Consensus 252 -----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 -----------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp -----------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00012446889999999999999999999976
No 272
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.9e-36 Score=332.64 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=186.5
Q ss_pred cCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEEecC
Q 002892 585 DGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVLEFM 663 (870)
Q Consensus 585 ~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 663 (870)
+.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++...+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 3445568899999999987766789999999987543 34567899999886 8999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCC------CCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCC-------------Cce
Q 002892 664 PNGSLEKWLYSHNYF------LDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKN-------------MTA 724 (870)
Q Consensus 664 ~~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~-------------~~~ 724 (870)
+ |+|.+++...... .++..++.++.||+.||+||| +++|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999999865321 123345789999999999999 6679999999999999754 489
Q ss_pred EEeccccccccCCCCCcc--cccccccccccCCcccccC-------CCcCcccchHhHHHHHHHHHh-CCCCCCcccccc
Q 002892 725 RVSDFGISKLLGEDDDSV--TQTMTMATIGYMAPEYASD-------GIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGE 794 (870)
Q Consensus 725 kl~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~ 794 (870)
||+|||++.......... ......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||......+
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999998775433221 1234579999999999865 668999999999999999999 999997532221
Q ss_pred chHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 795 MSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
..+........ . ........++..+.+++.+||+.||++||++.+|++
T Consensus 248 ---~~i~~~~~~~~--~----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 248 ---SNIIRGIFSLD--E----------MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---HHHHHTCCCCC--C----------CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHhcCCCCcc--c----------ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11111111000 0 001112245668999999999999999999999985
No 273
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.5e-36 Score=325.92 Aligned_cols=273 Identities=19% Similarity=0.242 Sum_probs=190.1
Q ss_pred hHHHHhhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe-
Q 002892 578 LDIQQATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF- 655 (870)
Q Consensus 578 ~~~~~~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 655 (870)
.......++|++.+.||+|+||.||+|+.. +|+.||||++..... ......++++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345567789999999999999999999975 689999999865432 22456678888899999999999999865333
Q ss_pred ------eEEEEecCCCCCHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC-CCceE
Q 002892 656 ------KALVLEFMPNGSLEKWLY---SHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK-NMTAR 725 (870)
Q Consensus 656 ------~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-~~~~k 725 (870)
.++||||+++ ++.+.+. .....+++..+..++.|++.|++|||. +++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999976 5554443 244568999999999999999999993 2466999999999999997 89999
Q ss_pred EeccccccccCCCCCcccccccccccccCCcccccCCC-cCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHh
Q 002892 726 VSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGI-ISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLS 804 (870)
Q Consensus 726 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~ 804 (870)
|+|||++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ...+..+....
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHc
Confidence 99999998764332 223346899999999986654 89999999999999999999999976322 22222222211
Q ss_pred c-CCc-hhhhcchhh-----hcccCcchH------HHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 805 L-PRG-LTEVVDASL-----VREVQPSYA------KMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 805 ~-~~~-~~~~~~~~~-----~~~~~~~~~------~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. +.. .....++.. .......+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1 110 100000000 000000000 0113567999999999999999999999976
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4e-36 Score=324.07 Aligned_cols=254 Identities=22% Similarity=0.293 Sum_probs=176.6
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh-hHHHHHHHHHHH-HHHhcCCCceeEEeeeeeeCCeeEEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERAFRSFESECE-VLRNVRHRNLIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~lv~ 660 (870)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 478999999999999999999975 78999999997643 233344555555 677789999999999999999999999
Q ss_pred ecCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccC
Q 002892 661 EFMPNGSLEKWLYS----HNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLG 736 (870)
Q Consensus 661 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 736 (870)
||+++ +|.+++.. ....+++..+..++.|++.|++|||+. .||+||||||+||+++.++.+||+|||++....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99975 88877763 245689999999999999999999943 169999999999999999999999999998664
Q ss_pred CCCCcccccccccccccCCcccc----cCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 737 EDDDSVTQTMTMATIGYMAPEYA----SDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 737 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......... ..+
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------------~~~ 242 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL------------TQV 242 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CCC
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH------------HHH
Confidence 322 22234689999999998 45678999999999999999999999997532111000 000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...... ... ......++..+.+++.+||+.||++||++.++++
T Consensus 243 ~~~~~~-~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 243 VKGDPP-QLS-NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCSCCC-CCC-CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hcCCCC-CCC-CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 000000 000 0000123457899999999999999999999976
No 275
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.3e-35 Score=321.16 Aligned_cols=263 Identities=21% Similarity=0.271 Sum_probs=199.4
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CC-cEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc------eeEEeeeeeeCCe
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DG-TNVAIKVFNLQLERAFRSFESECEVLRNVRHRN------LIKIFSSCCNLDF 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 655 (870)
.++|++.+.||+|+||.||+|... ++ +.||+|+++... .....+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 478999999999999999999864 34 689999997543 34567888999999997765 8999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee----------------
Q 002892 656 KALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL---------------- 718 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill---------------- 718 (870)
.++||||+ ++++.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 66777777644 356899999999999999999999 7779999999999999
Q ss_pred ---CCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccc
Q 002892 719 ---DKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEM 795 (870)
Q Consensus 719 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~ 795 (870)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~ 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR-E 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 56789999999999865332 22346899999999999999999999999999999999999999763221 1
Q ss_pred hHHHHHHH--hcCCchhhhc-ch----------------------hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCC
Q 002892 796 SLKHWIKL--SLPRGLTEVV-DA----------------------SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM 850 (870)
Q Consensus 796 ~~~~~~~~--~~~~~~~~~~-~~----------------------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP 850 (870)
........ ..|..+.... .. ..............++..+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 11111111 1111110000 00 00000000001123356789999999999999999
Q ss_pred CHHHHHH
Q 002892 851 CMTDVVV 857 (870)
Q Consensus 851 s~~evl~ 857 (870)
|+.|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999974
No 276
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=8.8e-36 Score=321.88 Aligned_cols=252 Identities=20% Similarity=0.261 Sum_probs=172.6
Q ss_pred hhcCCCCCC-eeccccceeEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeeeeee----CCee
Q 002892 583 ATDGFNECN-LLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSSCCN----LDFK 656 (870)
Q Consensus 583 ~~~~~~~~~-~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 656 (870)
..++|++.+ +||+|+||.||+|... +++.||+|++...... ..+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 456788854 6999999999999976 6899999999754221 2223334566799999999999876 4457
Q ss_pred EEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEEeccccc
Q 002892 657 ALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARVSDFGIS 732 (870)
Q Consensus 657 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a 732 (870)
++||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998653 46999999999999999999999 567999999999999976 455999999999
Q ss_pred cccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 733 KLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 733 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||............ ...
T Consensus 179 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----------~~~ 244 (336)
T 3fhr_A 179 KETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM----------KRR 244 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH----------HHh
Confidence 865422 223346899999999998889999999999999999999999999753222110000 000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
+....... +......++..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 245 IRLGQYGF--PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ------CC--CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhcccccc--CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 00001123457889999999999999999999987
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.4e-35 Score=326.39 Aligned_cols=264 Identities=20% Similarity=0.262 Sum_probs=197.9
Q ss_pred hcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-----------CCceeEEeeeee
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVLRNVR-----------HRNLIKIFSSCC 651 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 651 (870)
.++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999996 478999999997543 33466788999998886 899999999987
Q ss_pred eCC----eeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecccCCCceeeC------
Q 002892 652 NLD----FKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDVGLALEYLHHSHST-PVVHCNLKPNNILLD------ 719 (870)
Q Consensus 652 ~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~-~ivH~dlk~~Nill~------ 719 (870)
..+ ..++||||+ +++|.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 89999999864 345899999999999999999999 55 799999999999994
Q ss_pred CCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCcccccc-----
Q 002892 720 KNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGE----- 794 (870)
Q Consensus 720 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~----- 794 (870)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4458999999999876432 223468999999999999999999999999999999999999997542211
Q ss_pred chHHHHHHHh--cCCchh-------hhcchh-hhccc-------------CcchHHHHHHHHHHHHHhhccCCCCCCCCC
Q 002892 795 MSLKHWIKLS--LPRGLT-------EVVDAS-LVREV-------------QPSYAKMDCLLRIMHLALGCCMDSPEQRMC 851 (870)
Q Consensus 795 ~~~~~~~~~~--~~~~~~-------~~~~~~-~~~~~-------------~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs 851 (870)
..+....... .|..+. ..++.. ..... .....+..++..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 1111111110 111000 000000 00000 000012356778999999999999999999
Q ss_pred HHHHHH
Q 002892 852 MTDVVV 857 (870)
Q Consensus 852 ~~evl~ 857 (870)
+.|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999976
No 278
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=324.68 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=196.0
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe-----
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF----- 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 655 (870)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 468999999999999999999965 68999999986542 3345678899999999999999999999977654
Q ss_pred -eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 656 -KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 656 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
.++||||++ ++|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588777643 3899999999999999999999 56799999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCcccccC-CCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHH-hcCC-chhh
Q 002892 735 LGEDDDSVTQTMTMATIGYMAPEYASD-GIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKL-SLPR-GLTE 811 (870)
Q Consensus 735 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~-~~~~-~~~~ 811 (870)
.... .....||+.|+|||++.+ ..++.++||||+|+++|||++|+.||...... ..+...... ..+. .+..
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 5322 233468999999999876 67899999999999999999999999763221 112222211 1111 0100
Q ss_pred hc-ch-------hhhcccCcch--HHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VV-DA-------SLVREVQPSY--AKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~-~~-------~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
.+ +. .+.......+ ....++..+.+++.+|++.||++||++.++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 00 0000000000 01123567899999999999999999999975
No 279
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=330.41 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=187.4
Q ss_pred hcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEEEec
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 662 (870)
..+|+..++||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+....|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 346888899999999997665567899999999865432 2356799999999 799999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC-----CCceEEeccccccccCC
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK-----NMTARVSDFGISKLLGE 737 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~a~~~~~ 737 (870)
++ |+|.+++.......++..+..++.||+.||+||| +++|+||||||+||+++. ...+||+|||++.....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 6999999877655666677899999999999999 666999999999999953 23578999999987643
Q ss_pred CCCc-ccccccccccccCCccccc---CCCcCcccchHhHHHHHHHHHh-CCCCCCccccccchHHHHHHHhcCCchhhh
Q 002892 738 DDDS-VTQTMTMATIGYMAPEYAS---DGIISPKCDVYSYGVLLMETFT-RKKPTDEMFTGEMSLKHWIKLSLPRGLTEV 812 (870)
Q Consensus 738 ~~~~-~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (870)
.... .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... . ... .......
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~--~-~~~---~~~~~~~- 248 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--A-NIL---LGACSLD- 248 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH--H-HHH---TTCCCCT-
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH--H-HHH---hccCCcc-
Confidence 3221 2234457999999999997 4567889999999999999999 889986421111 0 000 0000000
Q ss_pred cchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 813 VDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. ..........+.+++.+||+.||++||++.||++
T Consensus 249 -------~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 -------C---LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -------T---SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------c---cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0 0001123446789999999999999999999984
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.1e-36 Score=323.36 Aligned_cols=243 Identities=23% Similarity=0.262 Sum_probs=198.0
Q ss_pred HHhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhhH------HHHHHHHHHHHHHhcC--CCceeEEeeeee
Q 002892 581 QQATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLER------AFRSFESECEVLRNVR--HRNLIKIFSSCC 651 (870)
Q Consensus 581 ~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~~ 651 (870)
....++|++.+.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999999985 47899999999765321 2245677999999996 599999999999
Q ss_pred eCCeeEEEEecCCC-CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC-CCCceEEecc
Q 002892 652 NLDFKALVLEFMPN-GSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-KNMTARVSDF 729 (870)
Q Consensus 652 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 729 (870)
..+..++||||+.+ ++|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999976 89999998654 4899999999999999999999 66799999999999999 7899999999
Q ss_pred ccccccCCCCCcccccccccccccCCcccccCCCc-CcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc
Q 002892 730 GISKLLGEDDDSVTQTMTMATIGYMAPEYASDGII-SPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG 808 (870)
Q Consensus 730 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 808 (870)
|++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 195 g~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~~--- 260 (320)
T 3a99_A 195 GSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQV--- 260 (320)
T ss_dssp TTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCCC---
T ss_pred cccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcccc---
Confidence 9998764322 223468999999999877665 688999999999999999999996521 1110000
Q ss_pred hhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 809 LTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
. .. ..++..+.+++.+||+.+|++||++.|+++
T Consensus 261 ---------~--~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 ---------F--FR-----QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ---------C--CS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------c--cc-----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 012346889999999999999999999976
No 281
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.4e-34 Score=311.82 Aligned_cols=127 Identities=25% Similarity=0.411 Sum_probs=78.0
Q ss_pred ccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEE
Q 002892 359 LISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLS 438 (870)
Q Consensus 359 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 438 (870)
+++|++|++++|++++..+ +..+++|++|++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|+
T Consensus 220 ~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLF 293 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEE
Confidence 3455555555555553332 55555666666666666532 3456666666777776666643 3466667777777
Q ss_pred cCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccc
Q 002892 439 LARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 439 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 493 (870)
+++|.+++..|..|..+++|+.|+|++|++++..| +..+++|+.|++++|+++
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 77777766666667777777777777777765444 666777777777777664
No 282
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.6e-36 Score=319.24 Aligned_cols=244 Identities=25% Similarity=0.304 Sum_probs=189.4
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechhh------HHHHHHHHHHHHHHhc----CCCceeEEee
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLE------RAFRSFESECEVLRNV----RHRNLIKIFS 648 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~~~~ 648 (870)
.....++|++.+.||+|+||.||+|+. .+++.||+|++..... .....+.+|++++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 345567899999999999999999985 4789999999975432 1223456789999888 8999999999
Q ss_pred eeeeCCeeEEEEec-CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeC-CCCceEE
Q 002892 649 SCCNLDFKALVLEF-MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLD-KNMTARV 726 (870)
Q Consensus 649 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~-~~~~~kl 726 (870)
++...+..++|||| +++++|.+++...+ .+++..++.++.|++.||+||| +++|+||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 78999999998654 4899999999999999999999 55699999999999999 8899999
Q ss_pred eccccccccCCCCCcccccccccccccCCcccccCCCcC-cccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhc
Q 002892 727 SDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIIS-PKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSL 805 (870)
Q Consensus 727 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 805 (870)
+|||++....... .....|++.|+|||++.+..+. .++||||+|+++|||++|+.||.... .....
T Consensus 182 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~-- 248 (312)
T 2iwi_A 182 IDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEA-- 248 (312)
T ss_dssp CCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHT--
T ss_pred EEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhh--
Confidence 9999998764322 2334689999999998776654 58999999999999999999996521 11100
Q ss_pred CCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 806 PRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
... .. ..++..+.+++.+||+.+|++||++.|+++
T Consensus 249 ----------~~~--~~-----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 249 ----------ELH--FP-----AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----------CCC--CC-----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----------ccC--Cc-----ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00 112346889999999999999999999986
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=337.50 Aligned_cols=335 Identities=21% Similarity=0.223 Sum_probs=242.2
Q ss_pred CCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEE
Q 002892 37 QLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHL 116 (870)
Q Consensus 37 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 116 (870)
.+.+++.|++++|.++...+..++.+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 36788999999999986666678889999999999999997777789999999999999999997777888999999999
Q ss_pred EeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeeccccc
Q 002892 117 NFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRL 196 (870)
Q Consensus 117 ~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l 196 (870)
+|++|.|++.++..|+++++|++|+|++|.+++..|..+..+++|++|+|++|.+++..
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------- 187 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------------------- 187 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---------------------
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---------------------
Confidence 99999999666666789999999999999999888888888888888888888887431
Q ss_pred ccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCC
Q 002892 197 TGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPL 276 (870)
Q Consensus 197 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l 276 (870)
+..+++|+.|++++|.+++ +...++|+.|++++|.++.++..
T Consensus 188 -------~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~-------------------------- 229 (597)
T 3oja_B 188 -------LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP-------------------------- 229 (597)
T ss_dssp -------GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS--------------------------
T ss_pred -------hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc--------------------------
Confidence 2334556666666666552 22233455555555554432210
Q ss_pred CCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccc
Q 002892 277 DSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCL 356 (870)
Q Consensus 277 ~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~ 356 (870)
. .++|+.|++++|.+++. ..+
T Consensus 230 ----------------------------~------~~~L~~L~L~~n~l~~~-------------------------~~l 250 (597)
T 3oja_B 230 ----------------------------V------NVELTILKLQHNNLTDT-------------------------AWL 250 (597)
T ss_dssp ----------------------------C------CSCCCEEECCSSCCCCC-------------------------GGG
T ss_pred ----------------------------c------CCCCCEEECCCCCCCCC-------------------------hhh
Confidence 0 12445555555555421 224
Q ss_pred cCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCE
Q 002892 357 SSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLIT 436 (870)
Q Consensus 357 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 436 (870)
..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.
T Consensus 251 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 251 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 455677777777777777777777777788888888888774 5666777888888888888887 46777778888888
Q ss_pred EEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccC
Q 002892 437 LSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKI 496 (870)
Q Consensus 437 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 496 (870)
|+|++|.+++. | +..+++|+.|+|++|.+++..... .+..+....+.+|...|..
T Consensus 329 L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~--~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 329 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRA--LFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHH--HTTTCCTTTBCCCCCCCCT
T ss_pred EECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHH--HHHHHhhhccccccccCCc
Confidence 88888888754 2 667788889999999887542221 2333334444555544433
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.4e-35 Score=338.95 Aligned_cols=272 Identities=22% Similarity=0.289 Sum_probs=200.9
Q ss_pred hhcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeech-hhHHHHHHHHHHHHHHhcCCCceeEEeeeeee------CC
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQ-LERAFRSFESECEVLRNVRHRNLIKIFSSCCN------LD 654 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 654 (870)
..++|++.+.||+|+||.||+|... +|+.||||+++.. .......+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 3478999999999999999999864 6899999998754 34455778999999999999999999998755 66
Q ss_pred eeEEEEecCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc---eEEecc
Q 002892 655 FKALVLEFMPNGSLEKWLYSHN--YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT---ARVSDF 729 (870)
Q Consensus 655 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 729 (870)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 7899999999999999998643 35899999999999999999999 567999999999999987765 999999
Q ss_pred ccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCc-
Q 002892 730 GISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRG- 808 (870)
Q Consensus 730 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 808 (870)
|.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|..||..... ...|........
T Consensus 169 G~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC----
T ss_pred cccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccc
Confidence 9998764332 22345689999999999999999999999999999999999999965211 111111000000
Q ss_pred ----hhhhcchhhh--cc-cCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHHhHh
Q 002892 809 ----LTEVVDASLV--RE-VQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTD-----VVVKLQKIKQ 864 (870)
Q Consensus 809 ----~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~e-----vl~~L~~i~~ 864 (870)
..+....... .. ..+.......+..+.+++..||..||++||++.+ ..+.++++.+
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000000000 00 0011111234667999999999999999999988 4555555544
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.4e-34 Score=309.64 Aligned_cols=307 Identities=28% Similarity=0.393 Sum_probs=176.7
Q ss_pred ccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCcc
Q 002892 35 LGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLV 114 (870)
Q Consensus 35 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 114 (870)
+..+++|+.|++++|.++ .++. +..+++|++|++++|++++ ++. +.++++|++|++++|.++. + ..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCC
Confidence 455666666666666666 3443 5666666666666666663 333 6666666666666666652 3 2466666666
Q ss_pred EEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeeccc
Q 002892 115 HLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWAN 194 (870)
Q Consensus 115 ~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n 194 (870)
+|++++|.+++. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+.
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~---------------------- 168 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVK---------------------- 168 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCC----------------------
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcC----------------------
Confidence 666666666632 22 5666666666666664443322 2445555555555555443
Q ss_pred ccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCC
Q 002892 195 RLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSN 274 (870)
Q Consensus 195 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 274 (870)
+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.++... .+..+++|++|++++|
T Consensus 169 ---~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~----------~~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 169 ---DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDIT----------PVANMTRLNSLKIGNN 231 (347)
T ss_dssp ---CCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCG----------GGGGCTTCCEEECCSS
T ss_pred ---Cchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCc----------hhhcCCcCCEEEccCC
Confidence 2222 5566777777777777764333 667777777777777776532 2566677777777777
Q ss_pred CCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcc
Q 002892 275 PLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPT 354 (870)
Q Consensus 275 ~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~ 354 (870)
++.+. +. +..+++|+.|++++|.+.+
T Consensus 232 ~l~~~--------------------------~~-~~~l~~L~~L~l~~n~l~~--------------------------- 257 (347)
T 4fmz_A 232 KITDL--------------------------SP-LANLSQLTWLEIGTNQISD--------------------------- 257 (347)
T ss_dssp CCCCC--------------------------GG-GTTCTTCCEEECCSSCCCC---------------------------
T ss_pred ccCCC--------------------------cc-hhcCCCCCEEECCCCccCC---------------------------
Confidence 66532 11 3444555555555555542
Q ss_pred cccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCC
Q 002892 355 CLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDL 434 (870)
Q Consensus 355 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 434 (870)
. ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..|..|+++++|
T Consensus 258 --------------------~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 258 --------------------I--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp --------------------C--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred --------------------C--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 1 1233344444444444444432 235555666666666666665556666666666
Q ss_pred CEEEcCCCcccCcccccccCCCCCCeEecCCCccc
Q 002892 435 ITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLS 469 (870)
Q Consensus 435 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 469 (870)
+.|++++|++++..| +..+++|+.|++++|.|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 666666666665444 666666666666666654
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.3e-34 Score=304.56 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=185.2
Q ss_pred hcCCCCCCeeccccceeEEEEEec-CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++.+++++||||+++++++...+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999975 58999999997653 34457789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||++|++|.++++.. ....++.+++.|++.||+||| ++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 9999999999999643 366678999999999999999 6679999999999999999999998543
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhc
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVR 819 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (870)
|++ .++.++|||||||++|||++|+.||......... .... .....
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-------------~~~~-~~~~~ 220 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-------------APAE-RDTAG 220 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-------------EECC-BCTTS
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-------------HHHH-HHhcc
Confidence 333 2578999999999999999999999763221100 0000 00000
Q ss_pred cc-CcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHhHhHh
Q 002892 820 EV-QPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVVKLQKIKQTF 866 (870)
Q Consensus 820 ~~-~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~~L~~i~~~~ 866 (870)
.. ........++..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00 0001112345678999999999999999 9999999999987643
No 287
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.2e-34 Score=305.97 Aligned_cols=191 Identities=34% Similarity=0.598 Sum_probs=146.4
Q ss_pred CchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCccccccc
Q 002892 305 IPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLE 384 (870)
Q Consensus 305 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 384 (870)
+|..+..+++|++|++++|.+.+.+| ..+..+++|++|+|++|++++.+|..+..++
T Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p-----------------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 117 IPDFLSQIKTLVTLDFSYNALSGTLP-----------------------PSISSLPNLVGITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESCCC-----------------------GGGGGCTTCCEEECCSSCCEEECCGGGGCCC
T ss_pred CCHHHhCCCCCCEEeCCCCccCCcCC-----------------------hHHhcCCCCCeEECcCCcccCcCCHHHhhhh
Confidence 34455566666666666666664343 3345556777777777777777777777776
Q ss_pred -ccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEec
Q 002892 385 -YILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDL 463 (870)
Q Consensus 385 -~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 463 (870)
+|+.|++++|++++.+|..|..++ |++|+|++|++++..|..|..+++|+.|+|++|.+++..|. +..+++|++|+|
T Consensus 174 ~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 251 (313)
T 1ogq_A 174 KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDL 251 (313)
T ss_dssp TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEEC
T ss_pred hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEEC
Confidence 778888888888777777787776 88888888888877888888888888888888888766555 777888888888
Q ss_pred CCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccccccccccccccCCC
Q 002892 464 SNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLAQSFLWNYALCGPP 520 (870)
Q Consensus 464 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~ 520 (870)
++|+|++.+|..|..+++|+.|+|++|+++|.+|....+.++....+.+|+++||.|
T Consensus 252 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 888888888888888888888888888888888887777777777788888889877
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-34 Score=341.02 Aligned_cols=242 Identities=21% Similarity=0.288 Sum_probs=195.5
Q ss_pred hcCCCCCCeeccccceeEEEEEec--CCcEEEEEEeechh-hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCe-----
Q 002892 584 TDGFNECNLLGAGSFGSVYKGTLF--DGTNVAIKVFNLQL-ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDF----- 655 (870)
Q Consensus 584 ~~~~~~~~~lg~G~~g~v~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 655 (870)
.++|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999975 68999999986443 3445678899999999999999999999987655
Q ss_pred eEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
.|+||||++|++|.+++.. .+++.+++.++.||+.||+||| ++||+||||||+||+++.+ .+||+|||++...
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999988765 4899999999999999999999 6679999999999999885 8999999999876
Q ss_pred CCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcch
Q 002892 736 GEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDA 815 (870)
Q Consensus 736 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (870)
... ....||+.|+|||++.++. +.++|||||||++|+|++|..||........ +
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~--------- 285 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------P--------- 285 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------C---------
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------c---------
Confidence 432 3346899999999987654 8899999999999999999888764221100 0
Q ss_pred hhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHhHhH
Q 002892 816 SLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRM-CMTDVVVKLQKIKQT 865 (870)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RP-s~~evl~~L~~i~~~ 865 (870)
........+..+.+++.+||+.||++|| ++.++.+.+..+.+.
T Consensus 286 -------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 286 -------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp -------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred -------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0011122345688999999999999999 566677777766543
No 289
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.5e-33 Score=301.36 Aligned_cols=130 Identities=21% Similarity=0.289 Sum_probs=74.0
Q ss_pred ccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 361 SLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
+|++|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+++
T Consensus 194 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 194 TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECC
Confidence 4555555555555555555555555555555555555555555555566666666666665 445555556666666666
Q ss_pred CCcccCcccccccCC------CCCCeEecCCCccc--CCCCcchhhccccceeeccCCc
Q 002892 441 RNRFQDSIPDSFGSL------TSLEYLDLSNNNLS--GEIPKSFEILSHLKRLNVSHNR 491 (870)
Q Consensus 441 ~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ls~N~ 491 (870)
+|++++..+..|..+ .+|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 273 ~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 273 TNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 666655555544432 45666666666665 4556666666667777666663
No 290
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.4e-32 Score=296.52 Aligned_cols=130 Identities=23% Similarity=0.272 Sum_probs=72.4
Q ss_pred ccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 361 SLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
+|++|+|++|++++..|..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+++
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 4555555555555555555555555555555555555444445555555555555555555 445555555556666666
Q ss_pred CCcccCcccccccC------CCCCCeEecCCCcccC--CCCcchhhccccceeeccCCc
Q 002892 441 RNRFQDSIPDSFGS------LTSLEYLDLSNNNLSG--EIPKSFEILSHLKRLNVSHNR 491 (870)
Q Consensus 441 ~N~l~~~~p~~~~~------l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~ 491 (870)
+|+|++..+..|.. .++|+.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 272 ~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 272 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 66665554444433 2556666777666642 455666667777777777664
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2e-33 Score=298.53 Aligned_cols=231 Identities=22% Similarity=0.299 Sum_probs=178.5
Q ss_pred hhcCCCCC-CeeccccceeEEEEEe-cCCcEEEEEEeechhhHHHHHHHHHHHHH-HhcCCCceeEEeeeeee----CCe
Q 002892 583 ATDGFNEC-NLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQLERAFRSFESECEVL-RNVRHRNLIKIFSSCCN----LDF 655 (870)
Q Consensus 583 ~~~~~~~~-~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~~~ 655 (870)
..++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|+.++ +..+||||+++++++.. ...
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 34567776 7899999999999986 47899999998643 3456788887 55689999999999876 677
Q ss_pred eEEEEecCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCC---CCceEEecccc
Q 002892 656 KALVLEFMPNGSLEKWLYSHN-YFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDK---NMTARVSDFGI 731 (870)
Q Consensus 656 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~ 731 (870)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 899999999999999998653 46899999999999999999999 666999999999999998 78999999999
Q ss_pred ccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccccchHHHHHHHhcCCchhh
Q 002892 732 SKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTE 811 (870)
Q Consensus 732 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (870)
+.... +..++.++||||+||++|||++|+.||........ ......
T Consensus 167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~~~~~~ 212 (299)
T 3m2w_A 167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SPGMKT 212 (299)
T ss_dssp CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------CCSCC
T ss_pred ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------hHHHHH
Confidence 86442 23467899999999999999999999965321110 000000
Q ss_pred hcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002892 812 VVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDVVV 857 (870)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~evl~ 857 (870)
...... ...+......++..+.+++.+||+.||++||++.|+++
T Consensus 213 ~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 213 RIRMGQ--YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SSCTTC--CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhcc--ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000 00011111234567999999999999999999999986
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4.4e-33 Score=300.63 Aligned_cols=298 Identities=19% Similarity=0.234 Sum_probs=242.1
Q ss_pred cCCCCCCCC------CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCC
Q 002892 6 TVPPHIGNL------SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPI 79 (870)
Q Consensus 6 ~~p~~~~~l------~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 79 (870)
++|+.+... .+|+.+++++++++ .+|..+. ++|+.|++++|.+++..|..|+.+++|++|+|++|+|++..
T Consensus 18 ~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp -------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 466654433 47999999999998 6787663 79999999999999777889999999999999999999888
Q ss_pred CCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccc--ccccccccc
Q 002892 80 PNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLI--GPIPTTIFN 157 (870)
Q Consensus 80 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~--~~~~~~~~~ 157 (870)
|..++++++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|.++ +..+..+..
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 171 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred HhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence 889999999999999999998 6777665 89999999999999776777999999999999999996 367788888
Q ss_pred cccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccc
Q 002892 158 ISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTL 237 (870)
Q Consensus 158 l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 237 (870)
+ +|+.|++++|++++ +|..+. ++|+.|++++|++++..+..+..+++|++|+|++|++++..+.+|..+++|+.|
T Consensus 172 l-~L~~L~l~~n~l~~-l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 246 (332)
T 2ft3_A 172 L-KLNYLRISEAKLTG-IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLREL 246 (332)
T ss_dssp C-CCSCCBCCSSBCSS-CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEE
T ss_pred C-ccCEEECcCCCCCc-cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEE
Confidence 8 99999999999986 444443 789999999999998888999999999999999999998888899999999999
Q ss_pred cccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccc-----cchhhhhccccccc--ccCchhhh
Q 002892 238 NIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFS-----ASFQQFYAHECKLK--GSIPKEIG 310 (870)
Q Consensus 238 ~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~-----~~l~~l~l~~n~l~--~~~~~~l~ 310 (870)
+|++|.++.++ ..+..+++|+.|++++|+++++.+..|.... ..++.+.+.+|.+. +..|..+.
T Consensus 247 ~L~~N~l~~lp---------~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 247 HLDNNKLSRVP---------AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp ECCSSCCCBCC---------TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred ECCCCcCeecC---------hhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 99999998654 3578899999999999999998877766542 33444555555544 34444455
Q ss_pred CccCCcEEEeeCC
Q 002892 311 NLRGLIALSLFTN 323 (870)
Q Consensus 311 ~l~~L~~L~L~~N 323 (870)
.+++|+.+++++|
T Consensus 318 ~l~~L~~l~l~~n 330 (332)
T 2ft3_A 318 CVTDRLAIQFGNY 330 (332)
T ss_dssp TBCCSTTEEC---
T ss_pred ccchhhhhhcccc
Confidence 5555555555544
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=6.6e-34 Score=315.68 Aligned_cols=241 Identities=17% Similarity=0.166 Sum_probs=179.2
Q ss_pred hhcCCCCCCeeccccceeEEEEEe-cCCcEEEEEEeechh---hHHHHHHHHHHHHHHhcCC-CceeE------------
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERAFRSFESECEVLRNVRH-RNLIK------------ 645 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~------------ 645 (870)
....|+..++||+|+||+||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| ++...
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345577888999999999999995 479999999987433 2235678999999999977 22111
Q ss_pred ---------Eeeeeee-----CCeeEEEEecCCCCCHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 002892 646 ---------IFSSCCN-----LDFKALVLEFMPNGSLEKWLY------SHNYFLDMLERLNIMIDVGLALEYLHHSHSTP 705 (870)
Q Consensus 646 ---------~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ 705 (870)
+..++.. ....+++|+++ +++|.++++ ..+..+++..++.++.|++.||+||| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 1111111 12346677755 789999885 22445788899999999999999999 667
Q ss_pred cEecccCCCceeeCCCCceEEeccccccccCCCCCcccccccccccccCCcccc----------cCCCcCcccchHhHHH
Q 002892 706 VVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYA----------SDGIISPKCDVYSYGV 775 (870)
Q Consensus 706 ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDvwslG~ 775 (870)
|+||||||+||+++.++.+||+|||+++..+.. .....| +.|+|||++ ....++.++|||||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 999999999999999999999999998865322 334457 999999999 5667889999999999
Q ss_pred HHHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 002892 776 LLMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLRIMHLALGCCMDSPEQRMCMTDV 855 (870)
Q Consensus 776 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~RPs~~ev 855 (870)
++|||++|+.||......+. ....+... . .++..+.+++.+||+.+|++||++.++
T Consensus 306 il~elltg~~Pf~~~~~~~~-----------------~~~~~~~~-~------~~~~~~~~li~~~l~~dP~~Rpt~~~~ 361 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALGG-----------------SEWIFRSC-K------NIPQPVRALLEGFLRYPKEDRLLPLQA 361 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGSC-----------------SGGGGSSC-C------CCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHCCCCCCCcchhhh-----------------HHHHHhhc-c------cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999999999976322110 11111100 0 123568999999999999999998777
Q ss_pred HH
Q 002892 856 VV 857 (870)
Q Consensus 856 l~ 857 (870)
++
T Consensus 362 l~ 363 (413)
T 3dzo_A 362 ME 363 (413)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.2e-32 Score=293.76 Aligned_cols=255 Identities=20% Similarity=0.230 Sum_probs=227.7
Q ss_pred CCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 14 LSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 14 l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
..+|+.++++++.++ .+|..+. ++|+.|++++|.+++..+..|+.+++|++|+|++|++++..|..+.++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 457999999999998 5776664 6899999999999977777999999999999999999988899999999999999
Q ss_pred ccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccc--cccccccccccceEEEeecccc
Q 002892 94 SRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIG--PIPTTIFNISTIIIINLVGNQL 171 (870)
Q Consensus 94 L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l 171 (870)
|++|+++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|++.. ..+..+.++++|++|++++|++
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999998 6777665 799999999999997777789999999999999999964 7788899999999999999999
Q ss_pred cccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCC
Q 002892 172 SGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSN 251 (870)
Q Consensus 172 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 251 (870)
+.. |..+ .++|+.|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.++.++
T Consensus 184 ~~l-~~~~---~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp--- 256 (330)
T 1xku_A 184 TTI-PQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP--- 256 (330)
T ss_dssp CSC-CSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC---
T ss_pred ccC-Cccc---cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC---
Confidence 854 4443 279999999999999888999999999999999999999888889999999999999999999654
Q ss_pred CCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 252 GEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 252 ~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
..+..+++|++|++++|+|+++.+..|...
T Consensus 257 ------~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~ 286 (330)
T 1xku_A 257 ------GGLADHKYIQVVYLHNNNISAIGSNDFCPP 286 (330)
T ss_dssp ------TTTTTCSSCCEEECCSSCCCCCCTTSSSCS
T ss_pred ------hhhccCCCcCEEECCCCcCCccChhhcCCc
Confidence 457889999999999999999877776543
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=9.8e-37 Score=345.83 Aligned_cols=368 Identities=19% Similarity=0.190 Sum_probs=221.5
Q ss_pred CCCCCeecCCCCccccCCCcc-ccCCCCCcEEEccCCcccc----cCCccccCCCCCCEEEcCCCccccCCCCCC-CCCC
Q 002892 14 LSFLMYLDISENNFRGYLPNE-LGQLRRLKFLGFAYNDLTG----SFPSWIGVFSKLQVLSLRNNSFTGPIPNSL-FNLS 87 (870)
Q Consensus 14 l~~L~~L~ls~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~ 87 (870)
.++|++|||++|+++...... +..+++|++|++++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357889999999987543333 6788999999999999874 356778888999999999999875433332 2344
Q ss_pred ----CCcEEeccCCcccc----ccCcCCCCcCCccEEEeecCccceecCCccc-----CCCCCCeeecccccccccc---
Q 002892 88 ----SLVRLDSRFNSISG----NIPSKIGNLTKLVHLNFADNNLRGEIPNEIG-----NLKNLADLVLALNNLIGPI--- 151 (870)
Q Consensus 88 ----~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~-----~l~~L~~L~L~~n~l~~~~--- 151 (870)
+|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+. ..++|++|++++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 69999999999883 4577888888999999999988754443332 3567888888888887643
Q ss_pred -cccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcc-cCCCCccEEEccCCcccCC----Cc
Q 002892 152 -PTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSI-TNASKLIGLDLNSNSLSGQ----IP 225 (870)
Q Consensus 152 -~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~i~~~----~~ 225 (870)
+..+..+++|++|++++|.+++..+..+.. .+ ...++|++|++++|.+++. ++
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~---------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 220 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQ---------------------GLKDSPCQLEALKLESCGVTSDNCRDLC 220 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHH---------------------HHHHSCCCCCEEECTTSCCBTTHHHHHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHH---------------------HHhcCCCCceEEEccCCCCcHHHHHHHH
Confidence 555556677777777777765432222211 11 1234666777777766643 35
Q ss_pred cccccccccccccccccccccccCCCCCcccccc-cccccccceEEcCCCCCCCCCCccccccccchhhhhccccccccc
Q 002892 226 NTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSS-LTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGS 304 (870)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~ 304 (870)
..+..+++|++|++++|.++..... .+.+. +..+++|++|++++|++..... ..
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~----~l~~~~~~~~~~L~~L~L~~n~l~~~~~---------------------~~ 275 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMA----ELCPGLLHPSSRLRTLWIWECGITAKGC---------------------GD 275 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHH----HHHHHHTSTTCCCCEEECTTSCCCHHHH---------------------HH
T ss_pred HHHHhCCCccEEeccCCcCChHHHH----HHHHHHhcCCCCceEEECcCCCCCHHHH---------------------HH
Confidence 5566667777777777766542100 01111 2246677777777776653100 01
Q ss_pred CchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCC----CCccc
Q 002892 305 IPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSS----IPSSF 380 (870)
Q Consensus 305 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~ 380 (870)
++..+..+++|+.|++++|.+.+..+..+...- ....++|++|+|++|.+++. ++..+
T Consensus 276 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l------------------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 337 (461)
T 1z7x_W 276 LCRVLRAKESLKELSLAGNELGDEGARLLCETL------------------LEPGCQLESLWVKSCSFTAACCSHFSSVL 337 (461)
T ss_dssp HHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHH------------------TSTTCCCCEEECTTSCCBGGGHHHHHHHH
T ss_pred HHHHHhhCCCcceEECCCCCCchHHHHHHHHHh------------------ccCCccceeeEcCCCCCchHHHHHHHHHH
Confidence 345566677777777777777643332221110 01124667777777766643 23334
Q ss_pred ccccccceEecCCCccCCCCcccccC-----CccCCEEEccCCccCC----cccccccCCCCCCEEEcCCCccc
Q 002892 381 WSLEYILRIDLSSNSLSGSLPSDIQN-----LKVLIYLNLSRNQLSG----NIPITIGGLKDLITLSLARNRFQ 445 (870)
Q Consensus 381 ~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 445 (870)
..+++|++|++++|.+++..+..+.. .++|++|+|++|++++ .+|..+..+++|+.|++++|+++
T Consensus 338 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 338 AQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred hhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 44455555555555554332322221 3345555555555543 34444444445555555555444
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.5e-32 Score=292.99 Aligned_cols=252 Identities=30% Similarity=0.481 Sum_probs=230.5
Q ss_pred CCCCeecCCCCcccc--CCCccccCCCCCcEEEccC-CcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcE
Q 002892 15 SFLMYLDISENNFRG--YLPNELGQLRRLKFLGFAY-NDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVR 91 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 91 (870)
.++++|+|++|++++ .+|..|..+++|++|++++ |.+++.+|..|+.+++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999998 8999999999999999995 9999899999999999999999999999889999999999999
Q ss_pred EeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCC-CCCeeecccccccccccccccccccceEEEeeccc
Q 002892 92 LDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLK-NLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQ 170 (870)
Q Consensus 92 L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (870)
|+|++|++++.+|..|+.+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|..+..++ |++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999989999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred ccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCC
Q 002892 171 LSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSS 250 (870)
Q Consensus 171 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 250 (870)
+++..|..+. .+++|+.|+|++|++++..|. +..+++|++|+|++|++++.+|.+|..+++|+.|+|++|+++...+
T Consensus 209 l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip- 285 (313)
T 1ogq_A 209 LEGDASVLFG-SDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP- 285 (313)
T ss_dssp EEECCGGGCC-TTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC-
T ss_pred ccCcCCHHHh-cCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC-
Confidence 9988776664 589999999999999976665 8889999999999999999999999999999999999999986432
Q ss_pred CCCcccccccccccccceEEcCCCC-CCC
Q 002892 251 NGEWSFLSSLTNCNKLRALSLGSNP-LDS 278 (870)
Q Consensus 251 ~~~~~~~~~l~~l~~L~~L~L~~N~-l~~ 278 (870)
....+++|+.|++++|+ +.+
T Consensus 286 --------~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 286 --------QGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp --------CSTTGGGSCGGGTCSSSEEES
T ss_pred --------CCccccccChHHhcCCCCccC
Confidence 23778899999999998 443
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.98 E-value=1.1e-33 Score=305.95 Aligned_cols=243 Identities=18% Similarity=0.235 Sum_probs=183.5
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechh--------hHHHHHHHHHHHHHHhcC---------CCceeE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--------ERAFRSFESECEVLRNVR---------HRNLIK 645 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~ 645 (870)
..++|++.+.||+|+||+||+|+. +|+.||||++.... ....+.+.+|++++++++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346788999999999999999997 68999999997652 223467888999988886 666666
Q ss_pred Eeeee-----------------ee-------------CCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 002892 646 IFSSC-----------------CN-------------LDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLAL 695 (870)
Q Consensus 646 ~~~~~-----------------~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l 695 (870)
+.+.+ .. .+..|+||||+++|++.+.+.. ..+++..+..++.||+.||
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHH
Confidence 65543 32 6789999999999977666644 3489999999999999999
Q ss_pred HHHH-hcCCCCcEecccCCCceeeCCCC--------------------ceEEeccccccccCCCCCcccccccccccccC
Q 002892 696 EYLH-HSHSTPVVHCNLKPNNILLDKNM--------------------TARVSDFGISKLLGEDDDSVTQTMTMATIGYM 754 (870)
Q Consensus 696 ~~Lh-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~ 754 (870)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ...||+.|+
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSM 244 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTT
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeeccc
Confidence 9999 655 99999999999999887 8999999999876421 346999999
Q ss_pred CcccccCCCcCcccchHhHHHH-HHHHHhCCCCCCccccccchHHHHHHHhcCCchhhhcchhhhcccCcchHHHHHHHH
Q 002892 755 APEYASDGIISPKCDVYSYGVL-LMETFTRKKPTDEMFTGEMSLKHWIKLSLPRGLTEVVDASLVREVQPSYAKMDCLLR 833 (870)
Q Consensus 755 aPE~~~~~~~~~~sDvwslG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (870)
|||++.+.. +.++||||+|++ .+++++|..||... .|.... ...+.................++..
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYL----TDKMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHH----HHHHHHTCCCSSCCCSHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHH----HHhhhhhhccCcccchhhhhhcCHH
Confidence 999998766 899999998777 77888899987531 110000 0000100001111112233456788
Q ss_pred HHHHHhhccCCCCCCCCCHHHHH
Q 002892 834 IMHLALGCCMDSPEQRMCMTDVV 856 (870)
Q Consensus 834 l~~l~~~cl~~~P~~RPs~~evl 856 (870)
+.+++.+||+.| |+.|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999966 888887
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.7e-36 Score=341.08 Aligned_cols=365 Identities=20% Similarity=0.178 Sum_probs=217.4
Q ss_pred CCCCcEEeccCCccccccCcC-CCCcCCccEEEeecCccce----ecCCcccCCCCCCeeecccccccccccccccc-cc
Q 002892 86 LSSLVRLDSRFNSISGNIPSK-IGNLTKLVHLNFADNNLRG----EIPNEIGNLKNLADLVLALNNLIGPIPTTIFN-IS 159 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~l~~N~l~~----~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~-l~ 159 (870)
+++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|++.+..+..+.. ++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 357889999999987543333 6788899999999999884 34666778889999999999887655544443 44
Q ss_pred ----cceEEEeeccccccc----CCCcccCCCCccceeeecccccccccCCccc-----CCCCccEEEccCCcccCCC--
Q 002892 160 ----TIIIINLVGNQLSGH----RPSTMGHSLPNRQFLLLWANRLTGTIPNSIT-----NASKLIGLDLNSNSLSGQI-- 224 (870)
Q Consensus 160 ----~L~~L~l~~N~l~~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~i~~~~-- 224 (870)
+|++|+|++|+++.. ++..+ ..+++|++|+|++|.+++..+..+. ..++|++|++++|++++..
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l-~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGCGVLSSTL-RTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHT-TSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred hCCCceeEEEccCCCCCHHHHHHHHHHH-ccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 588888888887742 23333 3466777777777777654333322 2456777777777776533
Q ss_pred --ccccccccccccccccccccccccCCCCCcccccccc-cccccceEEcCCCCCCCCCCccccccccchhhhhcccccc
Q 002892 225 --PNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLT-NCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKL 301 (870)
Q Consensus 225 --~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l 301 (870)
+..+..+++|++|++++|.++..... .+...+. ..++|++|++++|.+......
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~----~l~~~l~~~~~~L~~L~L~~n~l~~~~~~------------------- 217 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVR----VLCQGLKDSPCQLEALKLESCGVTSDNCR------------------- 217 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHH----HHHHHHHHSCCCCCEEECTTSCCBTTHHH-------------------
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHH----HHHHHHhcCCCCceEEEccCCCCcHHHHH-------------------
Confidence 44455567777777777776643210 0111111 244777777777766542100
Q ss_pred cccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCC----CC
Q 002892 302 KGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSS----IP 377 (870)
Q Consensus 302 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~ 377 (870)
.++..+..+++|+.|++++|.+.+.....+. +..+..+++|++|+|++|+++.. ++
T Consensus 218 --~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 218 --DLCGIVASKASLRELALGSNKLGDVGMAELC------------------PGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp --HHHHHHHHCTTCCEEECCSSBCHHHHHHHHH------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred --HHHHHHHhCCCccEEeccCCcCChHHHHHHH------------------HHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 2456667778888888888887643211111 01112345566666666666532 34
Q ss_pred cccccccccceEecCCCccCCCCcccccC-----CccCCEEEccCCccCCc----ccccccCCCCCCEEEcCCCcccCcc
Q 002892 378 SSFWSLEYILRIDLSSNSLSGSLPSDIQN-----LKVLIYLNLSRNQLSGN----IPITIGGLKDLITLSLARNRFQDSI 448 (870)
Q Consensus 378 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 448 (870)
..+..+++|++|++++|.+++..+..+.. .++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 44555566666666666655333323322 14566666666666543 3344455566666666666665544
Q ss_pred cccccC-----CCCCCeEecCCCcccC----CCCcchhhccccceeeccCCcccc
Q 002892 449 PDSFGS-----LTSLEYLDLSNNNLSG----EIPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 449 p~~~~~-----l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
+..+.. .++|+.|+|++|++++ .+|..+..+++|+.|++++|++++
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 433332 4566666666666654 455555556666666666666554
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.1e-30 Score=274.10 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=178.1
Q ss_pred eeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccce
Q 002892 189 LLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRA 268 (870)
Q Consensus 189 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~ 268 (870)
++.+++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|.++.+.. .+..+..+++|++
T Consensus 12 l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~------~~~~~~~~~~L~~ 82 (306)
T 2z66_A 12 IRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC------CSQSDFGTTSLKY 82 (306)
T ss_dssp EECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE------EEHHHHSCSCCCE
T ss_pred EEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC------cccccccccccCE
Confidence 444444444 3343332 456666666666664444445666666666666666653210 1223445566666
Q ss_pred EEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCC
Q 002892 269 LSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNL 348 (870)
Q Consensus 269 L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~ 348 (870)
|++++|.+.. +|..+..+++|++|++++|++.+..+
T Consensus 83 L~Ls~n~i~~--------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~------------------ 118 (306)
T 2z66_A 83 LDLSFNGVIT--------------------------MSSNFLGLEQLEHLDFQHSNLKQMSE------------------ 118 (306)
T ss_dssp EECCSCSEEE--------------------------EEEEEETCTTCCEEECTTSEEESSTT------------------
T ss_pred EECCCCcccc--------------------------ChhhcCCCCCCCEEECCCCccccccc------------------
Confidence 6666665542 23445666777777777777764322
Q ss_pred CCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCC-CCcccccCCccCCEEEccCCccCCccccc
Q 002892 349 NGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSG-SLPSDIQNLKVLIYLNLSRNQLSGNIPIT 427 (870)
Q Consensus 349 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 427 (870)
...+..+++|++|++++|++++..+..|..+++|++|++++|.+++ ..|..|..+++|++|+|++|++++..|..
T Consensus 119 ----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 194 (306)
T 2z66_A 119 ----FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 194 (306)
T ss_dssp ----TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred ----chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHH
Confidence 1235566778888888888887778888888888888888888875 57788888888888888888888777888
Q ss_pred ccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcc-ccceeeccCCcccccCCC
Q 002892 428 IGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILS-HLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 428 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~ 498 (870)
|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..+..++ +|+.|+|++|+|+|.++.
T Consensus 195 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 195 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp TTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred hcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 88888888888888888877777788888888888888888888888888874 888888888888887753
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.5e-30 Score=281.56 Aligned_cols=286 Identities=20% Similarity=0.228 Sum_probs=208.6
Q ss_pred ceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccc
Q 002892 161 IIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIR 240 (870)
Q Consensus 161 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~ 240 (870)
....++++|.++. +|..+. ++|++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|+
T Consensus 33 ~~~c~~~~~~l~~-iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 33 NGICKGSSGSLNS-IPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TSEEECCSTTCSS-CCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CeEeeCCCCCccc-cccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3345555666553 333332 466777777777776555577777777777777777777667777777777777777
Q ss_pred ccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEe
Q 002892 241 ANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSL 320 (870)
Q Consensus 241 ~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L 320 (870)
+|.++.++. ..+..+++|++|++++|++.++.+ ...+..+++|+.|++
T Consensus 109 ~n~l~~~~~--------~~~~~l~~L~~L~L~~n~l~~l~~------------------------~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 109 YNYLSNLSS--------SWFKPLSSLTFLNLLGNPYKTLGE------------------------TSLFSHLTKLQILRV 156 (353)
T ss_dssp SSCCSSCCH--------HHHTTCTTCSEEECTTCCCSSSCS------------------------SCSCTTCTTCCEEEE
T ss_pred CCcCCcCCH--------hHhCCCccCCEEECCCCCCcccCc------------------------hhhhccCCCCcEEEC
Confidence 777775431 236667777777777777764321 024566778888888
Q ss_pred eCCC-ccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCC
Q 002892 321 FTND-LNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGS 399 (870)
Q Consensus 321 ~~N~-l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 399 (870)
++|+ +.... +..+..+++|++|++++|++++..|..|..+++|++|++++|.++..
T Consensus 157 ~~n~~~~~~~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 213 (353)
T 2z80_A 157 GNMDTFTKIQ-----------------------RKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILL 213 (353)
T ss_dssp EESSSCCEEC-----------------------TTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTH
T ss_pred CCCccccccC-----------------------HHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccc
Confidence 8874 44322 34566778899999999999988889999999999999999998744
Q ss_pred CcccccCCccCCEEEccCCccCCccccccc---CCCCCCEEEcCCCcccC----cccccccCCCCCCeEecCCCcccCCC
Q 002892 400 LPSDIQNLKVLIYLNLSRNQLSGNIPITIG---GLKDLITLSLARNRFQD----SIPDSFGSLTSLEYLDLSNNNLSGEI 472 (870)
Q Consensus 400 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~ 472 (870)
.+..+..+++|+.|++++|++++..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+|+ .+
T Consensus 214 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 214 LEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp HHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred hhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-cc
Confidence 333455688999999999999876655443 46778999999999886 37788999999999999999999 55
Q ss_pred Ccc-hhhccccceeeccCCcccccCCCCCcccccc
Q 002892 473 PKS-FEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 473 p~~-~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
|.. |..+++|+.|+|++|+++|.+|....+..|.
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~~l~~l~~~~ 327 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 327 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCCCcHHHHHHH
Confidence 555 6899999999999999999998544444443
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.6e-29 Score=267.86 Aligned_cols=141 Identities=24% Similarity=0.337 Sum_probs=99.8
Q ss_pred CccccceeecCCcccCC-CCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCE
Q 002892 358 SLISLRQLHLGSNQLTS-SIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLIT 436 (870)
Q Consensus 358 ~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 436 (870)
.+++|++|+|++|.+++ ..|..|..+++|+.|++++|.+++..|..|..+++|++|+|++|++++..+..|..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 34455555555555554 45566666667777777777777666677777777777777777777766667777888888
Q ss_pred EEcCCCcccCcccccccCCC-CCCeEecCCCcccCCCC--cchhhccccceeeccCCcccccCCC
Q 002892 437 LSLARNRFQDSIPDSFGSLT-SLEYLDLSNNNLSGEIP--KSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 437 L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
|+|++|.+++..|..+..++ +|+.|+|++|.+++..+ .....+...+.+.+..|.+.|..|.
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 88888888887788888874 88888888888875432 2234456667777788888887775
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=273.89 Aligned_cols=204 Identities=20% Similarity=0.149 Sum_probs=105.8
Q ss_pred CCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEee
Q 002892 40 RLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFA 119 (870)
Q Consensus 40 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 119 (870)
.....++++|.++ .+|..+. ++|++|+|++|+|++..+..+.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLS 108 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECC
Confidence 3344555555555 4444332 355555555555554333345555555555555555554444445555555555555
Q ss_pred cCccceecCCcccCCCCCCeeeccccccccccc-ccccccccceEEEeecccccccCCCcccCCCCccceeeeccc-ccc
Q 002892 120 DNNLRGEIPNEIGNLKNLADLVLALNNLIGPIP-TTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWAN-RLT 197 (870)
Q Consensus 120 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n-~l~ 197 (870)
+|++++..+..+.++++|++|++++|++++..+ ..+.. +++|++|++++| .++
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~-------------------------l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 109 YNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSH-------------------------LTKLQILRVGNMDTFT 163 (353)
T ss_dssp SSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTT-------------------------CTTCCEEEEEESSSCC
T ss_pred CCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhcc-------------------------CCCCcEEECCCCcccc
Confidence 555553222234445555555555554443222 23334 444444444444 244
Q ss_pred cccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCC
Q 002892 198 GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLD 277 (870)
Q Consensus 198 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 277 (870)
...+..+..+++|++|++++|++++..|..|..+++|++|++++|.++.++. ..+..+++|+.|++++|++.
T Consensus 164 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~--------~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 164 KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLE--------IFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHH--------HHHHHTTTEEEEEEESCBCT
T ss_pred ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchh--------hhhhhcccccEEECCCCccc
Confidence 4445566666666666666666666666666666666666666666654321 12334556666666666665
Q ss_pred CC
Q 002892 278 SI 279 (870)
Q Consensus 278 ~~ 279 (870)
+.
T Consensus 236 ~~ 237 (353)
T 2z80_A 236 TF 237 (353)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.9e-28 Score=275.03 Aligned_cols=233 Identities=27% Similarity=0.338 Sum_probs=164.1
Q ss_pred CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 208 SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 208 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
++++.|+|++|+|++..+..|.++++|++|+|++|.++.+. +..|..+++|++|+|++|++..+.
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~--------~~~~~~l~~L~~L~L~~n~l~~~~------- 128 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIE--------IGAFNGLANLNTLELFDNRLTTIP------- 128 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEEC--------GGGGTTCSSCCEEECCSSCCSSCC-------
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccC--------hhhccCCccCCEEECCCCcCCeeC-------
Confidence 34455555555555444445555555555555555554432 123445555555555555554321
Q ss_pred ccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeec
Q 002892 288 SASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHL 367 (870)
Q Consensus 288 ~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~L 367 (870)
+..+..+++|+.|++++|.+....+ ..|..+++|++|+|
T Consensus 129 ------------------~~~~~~l~~L~~L~L~~N~i~~~~~-----------------------~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 129 ------------------NGAFVYLSKLKELWLRNNPIESIPS-----------------------YAFNRIPSLRRLDL 167 (440)
T ss_dssp ------------------TTTSCSCSSCCEEECCSCCCCEECT-----------------------TTTTTCTTCCEEEC
T ss_pred ------------------HhHhhccccCceeeCCCCcccccCH-----------------------HHhhhCcccCEeCC
Confidence 2234555666666666666653222 23455667777777
Q ss_pred CC-cccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccC
Q 002892 368 GS-NQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQD 446 (870)
Q Consensus 368 s~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 446 (870)
++ |.+....+..|.++++|+.|+|++|.++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQV 245 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeE
Confidence 77 4455555557888888888888888888 455 47888899999999999998888899999999999999999998
Q ss_pred cccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 447 SIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 447 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+..
T Consensus 246 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 246 IERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp ECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTT
T ss_pred EChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCc
Confidence 8888999999999999999999987778888999999999999999998864
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.7e-32 Score=316.37 Aligned_cols=130 Identities=16% Similarity=0.100 Sum_probs=53.8
Q ss_pred CCCCCcEEEccCCcccccCCccccCC--CCCCEEEcCCCc-ccc-CCCCCCCCCCCCcEEeccCCccccc----cCcCCC
Q 002892 37 QLRRLKFLGFAYNDLTGSFPSWIGVF--SKLQVLSLRNNS-FTG-PIPNSLFNLSSLVRLDSRFNSISGN----IPSKIG 108 (870)
Q Consensus 37 ~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~-i~~-~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~ 108 (870)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 34455555555554443333333331 225555554443 110 0111112344555555555544322 111223
Q ss_pred CcCCccEEEeecCccc----eecCCcccCCCCCCeeecccccccccccccccccccceEEEee
Q 002892 109 NLTKLVHLNFADNNLR----GEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLV 167 (870)
Q Consensus 109 ~l~~L~~L~l~~N~l~----~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 167 (870)
.+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ ++..+.++++|++|+++
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 3444555555555443 1222223344445555555444442 33444444445554444
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.4e-28 Score=275.17 Aligned_cols=232 Identities=25% Similarity=0.266 Sum_probs=156.1
Q ss_pred CccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccc
Q 002892 209 KLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFS 288 (870)
Q Consensus 209 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 288 (870)
++++|+|++|+|+++.+..|.++++|+.|+|++|.++.+.. ..|..+++|++|+|++|++..+.
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~--------~~~~~l~~L~~L~L~~n~l~~~~-------- 139 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEV--------GAFNGLASLNTLELFDNWLTVIP-------- 139 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT--------TTTTTCTTCCEEECCSSCCSBCC--------
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcCh--------hhccCcccCCEEECCCCcCCccC--------
Confidence 44455555555544444445555555555555554444321 23444455555555555544321
Q ss_pred cchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecC
Q 002892 289 ASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLG 368 (870)
Q Consensus 289 ~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls 368 (870)
+..+..+++|++|+|++|++....+ ..|..+++|+.|+|+
T Consensus 140 -----------------~~~~~~l~~L~~L~L~~N~l~~~~~-----------------------~~~~~l~~L~~L~l~ 179 (452)
T 3zyi_A 140 -----------------SGAFEYLSKLRELWLRNNPIESIPS-----------------------YAFNRVPSLMRLDLG 179 (452)
T ss_dssp -----------------TTTSSSCTTCCEEECCSCCCCEECT-----------------------TTTTTCTTCCEEECC
T ss_pred -----------------hhhhcccCCCCEEECCCCCcceeCH-----------------------hHHhcCCcccEEeCC
Confidence 2234455666666666666653222 234455667777777
Q ss_pred C-cccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCc
Q 002892 369 S-NQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 369 ~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 447 (870)
+ |.+....+..|.++++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++.
T Consensus 180 ~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 180 ELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred CCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 6 44554555567777888888888888874 34 477788888888888888888888888888888888888888888
Q ss_pred ccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 448 IPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 448 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
.|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+..
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 888888888899999998988877777788888899999999998888764
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.2e-28 Score=264.47 Aligned_cols=228 Identities=20% Similarity=0.286 Sum_probs=194.7
Q ss_pred CCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 14 LSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 14 l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
..++++|+|++|+++ .+|..+..+++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478899999999998 68888888999999999999998 88888999999999999999998 7888899999999999
Q ss_pred ccCCccccccCcCCCC---------cCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEE
Q 002892 94 SRFNSISGNIPSKIGN---------LTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIII 164 (870)
Q Consensus 94 L~~n~i~~~~~~~~~~---------l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 164 (870)
|++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 9998888788887765 889999999999988 778888888999999999998884 56678888889999
Q ss_pred EeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccc
Q 002892 165 NLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYL 244 (870)
Q Consensus 165 ~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l 244 (870)
+|++|.+.+..|..+. .+++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|+.++++++|+.+++..|.+
T Consensus 235 ~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp ECTTCTTCCBCCCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred ECcCCcchhhhHHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 9999888888877665 478888888888888888888888888888888888888888888888888888888887766
Q ss_pred ccc
Q 002892 245 TTE 247 (870)
Q Consensus 245 ~~~ 247 (870)
..+
T Consensus 314 ~~l 316 (328)
T 4fcg_A 314 AQL 316 (328)
T ss_dssp CC-
T ss_pred HHH
Confidence 543
No 307
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.4e-28 Score=262.05 Aligned_cols=234 Identities=26% Similarity=0.296 Sum_probs=174.7
Q ss_pred CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 208 SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 208 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
..+++|+|++|.++ .+|..+.++++|++|+|++|.++.+ +..+..+++|++|++++|++.
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~l---------p~~~~~l~~L~~L~Ls~n~l~---------- 140 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMEL---------PDTMQQFAGLETLTLARNPLR---------- 140 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCC---------CSCGGGGTTCSEEEEESCCCC----------
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccch---------hHHHhccCCCCEEECCCCccc----------
Confidence 34445555555554 3444444455555555555554432 123444555555555555544
Q ss_pred ccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeec
Q 002892 288 SASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHL 367 (870)
Q Consensus 288 ~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~L 367 (870)
.+|..+..+++|++|++++|++.+.+|..+... .++..+..+++|++|+|
T Consensus 141 ----------------~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~--------------~~~~~~~~l~~L~~L~L 190 (328)
T 4fcg_A 141 ----------------ALPASIASLNRLRELSIRACPELTELPEPLAST--------------DASGEHQGLVNLQSLRL 190 (328)
T ss_dssp ----------------CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE--------------C-CCCEEESTTCCEEEE
T ss_pred ----------------cCcHHHhcCcCCCEEECCCCCCccccChhHhhc--------------cchhhhccCCCCCEEEC
Confidence 234456666777777777776666666655431 12345677889999999
Q ss_pred CCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCc
Q 002892 368 GSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 368 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 447 (870)
++|+++ .+|..+..+++|+.|+|++|.+++ +|..+..+++|++|+|++|.+.+.+|..|+++++|+.|+|++|.+.+.
T Consensus 191 ~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 268 (328)
T 4fcg_A 191 EWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLT 268 (328)
T ss_dssp EEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCB
T ss_pred cCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhh
Confidence 999998 778889999999999999999994 677899999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccc
Q 002892 448 IPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 448 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 493 (870)
+|..+.++++|+.|+|++|++.+.+|..+..+++|+.++++.|.+.
T Consensus 269 ~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 269 LPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999988764
No 308
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.2e-31 Score=314.10 Aligned_cols=427 Identities=14% Similarity=0.087 Sum_probs=299.7
Q ss_pred CCccccCCCCCcEEEccCCcc---cccCCcccc------------CCCCCCEEEcCCCccccCCCCCCCCC--CCCcEEe
Q 002892 31 LPNELGQLRRLKFLGFAYNDL---TGSFPSWIG------------VFSKLQVLSLRNNSFTGPIPNSLFNL--SSLVRLD 93 (870)
Q Consensus 31 ~p~~~~~l~~L~~L~l~~n~l---~~~~~~~~~------------~l~~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~ 93 (870)
++..+..+++|+.|+++++.. .+.+|..++ .+++|++|+|++|.+++..+..+... .+|++|+
T Consensus 65 ~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~ 144 (592)
T 3ogk_B 65 PDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLK 144 (592)
T ss_dssp HHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEE
T ss_pred hHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEE
Confidence 444567788899999987642 123443333 68999999999999886666666653 4599999
Q ss_pred ccCCc-ccc-ccCcCCCCcCCccEEEeecCcccee----cCCcccCCCCCCeeeccccccc----ccccccccccccceE
Q 002892 94 SRFNS-ISG-NIPSKIGNLTKLVHLNFADNNLRGE----IPNEIGNLKNLADLVLALNNLI----GPIPTTIFNISTIII 163 (870)
Q Consensus 94 L~~n~-i~~-~~~~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~ 163 (870)
|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|+++.|.++ ..++..+.++++|+.
T Consensus 145 L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~ 224 (592)
T 3ogk_B 145 LDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVS 224 (592)
T ss_dssp EESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCE
T ss_pred CcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcE
Confidence 99987 321 1223335789999999999998755 3334567899999999999997 345566678899999
Q ss_pred EEeecccccccCCCcccCCCCccceeeecccccc---cccCCcccCCCCccEEEccCCcccCCCcccccccccccccccc
Q 002892 164 INLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLT---GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIR 240 (870)
Q Consensus 164 L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~ 240 (870)
|++++|.+.+ .+. ....+++|+.|+++..... ...+..+..+++|+.|+++++... .+|..+..+++|++|+|+
T Consensus 225 L~L~~~~~~~-l~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 225 VKVGDFEILE-LVG-FFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp EECSSCBGGG-GHH-HHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEET
T ss_pred EeccCccHHH-HHH-HHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecC
Confidence 9999999886 333 3445799999999864433 234567788899999999987554 678888899999999999
Q ss_pred ccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEe
Q 002892 241 ANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSL 320 (870)
Q Consensus 241 ~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L 320 (870)
+|.++... +...+..+++|++|+++ |.+... .++.....+++|+.|++
T Consensus 302 ~~~l~~~~-------~~~~~~~~~~L~~L~L~-~~~~~~------------------------~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 302 YALLETED-------HCTLIQKCPNLEVLETR-NVIGDR------------------------GLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp TCCCCHHH-------HHHHHTTCTTCCEEEEE-GGGHHH------------------------HHHHHHHHCTTCCEEEE
T ss_pred CCcCCHHH-------HHHHHHhCcCCCEEecc-CccCHH------------------------HHHHHHHhCCCCCEEEe
Confidence 99876432 22346789999999999 444321 12222344555666666
Q ss_pred e-----------CCCccccC-CchhhchhhHHHHHhc-CCCCCCCcccccC-ccccceeecC----CcccCCC-----CC
Q 002892 321 F-----------TNDLNGTI-PTTLGRLQQLQALLQR-NNLNGPIPTCLSS-LISLRQLHLG----SNQLTSS-----IP 377 (870)
Q Consensus 321 ~-----------~N~l~~~~-~~~~~~l~~L~~L~l~-n~~~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~~ 377 (870)
+ .|.+++.. +..+..+++|+.|+++ +++.+..+..+.. +++|+.|+|+ .|.+++. ++
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 6 23443321 2223345555555554 4444444444544 7889999996 7788754 33
Q ss_pred cccccccccceEecCCCc--cCCCCccccc-CCccCCEEEccCCccCCc-ccccccCCCCCCEEEcCCCcccCc-ccccc
Q 002892 378 SSFWSLEYILRIDLSSNS--LSGSLPSDIQ-NLKVLIYLNLSRNQLSGN-IPITIGGLKDLITLSLARNRFQDS-IPDSF 452 (870)
Q Consensus 378 ~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~ 452 (870)
..+.++++|+.|++++|. +++..+..+. .+++|++|+|++|++++. .+..+.++++|+.|++++|.+++. ++..+
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 509 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAV 509 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHH
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHH
Confidence 346778999999998644 6654444444 488999999999999863 455668899999999999998765 34445
Q ss_pred cCCCCCCeEecCCCcccCCCCcch-hhccccceeeccCCcc
Q 002892 453 GSLTSLEYLDLSNNNLSGEIPKSF-EILSHLKRLNVSHNRL 492 (870)
Q Consensus 453 ~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l 492 (870)
..+++|+.|+|++|+++..-...+ ..++.+....+..++-
T Consensus 510 ~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~~~ 550 (592)
T 3ogk_B 510 TKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSRRV 550 (592)
T ss_dssp HHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC--
T ss_pred HhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCccc
Confidence 679999999999999986533333 3567777777766543
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6.8e-28 Score=271.56 Aligned_cols=249 Identities=20% Similarity=0.157 Sum_probs=212.6
Q ss_pred CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 16 FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
....++.++++++ .+|..+. +++++|+|++|++++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4578899999998 5776654 689999999999998888899999999999999999998888889999999999999
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccc-cccccccccccccccceEEEeeccccccc
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALN-NLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
+|++++..+..|..+++|++|+|++|+|+...+..+.++++|++|++++| .+....+..+.++++|++|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 99999666677899999999999999999777778999999999999984 45545555788899999999999999865
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEW 254 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 254 (870)
|. ...+++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+++.++.
T Consensus 212 -~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----- 283 (452)
T 3zyi_A 212 -PN--LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPH----- 283 (452)
T ss_dssp -CC--CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCT-----
T ss_pred -cc--ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccCh-----
Confidence 32 3457899999999999998888899999999999999999998888889999999999999999987653
Q ss_pred ccccccccccccceEEcCCCCCCC
Q 002892 255 SFLSSLTNCNKLRALSLGSNPLDS 278 (870)
Q Consensus 255 ~~~~~l~~l~~L~~L~L~~N~l~~ 278 (870)
..+..+++|+.|+|++|++..
T Consensus 284 ---~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 284 ---DLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ---TSSTTCTTCCEEECCSSCEEC
T ss_pred ---HHhccccCCCEEEccCCCcCC
Confidence 356778899999999998753
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.5e-28 Score=270.19 Aligned_cols=248 Identities=20% Similarity=0.178 Sum_probs=211.4
Q ss_pred CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 16 FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
....++.++++++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4678899999998 6787664 689999999999998788899999999999999999997777889999999999999
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccc-ccccccccccccccceEEEeeccccccc
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNN-LIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
+|+++...+..|..+++|++|+|++|+|+...+..|.++++|++|++++|+ +....+..|.++++|++|+|++|+++..
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 200 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI 200 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc
Confidence 999986666678999999999999999997777789999999999999854 4445555788899999999999999854
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEW 254 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 254 (870)
|. ...+++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|+++.++.
T Consensus 201 -~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----- 272 (440)
T 3zyj_A 201 -PN--LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH----- 272 (440)
T ss_dssp -CC--CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT-----
T ss_pred -cc--cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh-----
Confidence 32 3457899999999999998888899999999999999999998888889999999999999999987653
Q ss_pred ccccccccccccceEEcCCCCCC
Q 002892 255 SFLSSLTNCNKLRALSLGSNPLD 277 (870)
Q Consensus 255 ~~~~~l~~l~~L~~L~L~~N~l~ 277 (870)
..+..+++|+.|+|++|++.
T Consensus 273 ---~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 273 ---DLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ---TTTSSCTTCCEEECCSSCEE
T ss_pred ---hHhccccCCCEEEcCCCCcc
Confidence 35677889999999999875
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5e-28 Score=255.00 Aligned_cols=226 Identities=20% Similarity=0.212 Sum_probs=188.1
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
-+.++.++++++ .+|..+ .++|++|++++|.+++..+..|+.+++|++|+|++|.+++..|..+.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 367899999998 567544 56899999999999977778889999999999999999977788899999999999999
Q ss_pred Cc-cccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccC
Q 002892 97 NS-ISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHR 175 (870)
Q Consensus 97 n~-i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 175 (870)
|. ++...|..|..+++|++|++++|++++..|..+.++++|++|++++|++++..+..+..+++|++|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 77666788899999999999999999777888889999999999999998777777888888999999998888655
Q ss_pred CCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccccc
Q 002892 176 PSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 176 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 246 (870)
+..+. .+++|+.|++++|++++..|..+..+++|++|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 170 ~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 170 ERAFR-GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTT-TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHhc-CccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 54443 47788888888888887778888888888888888888887666778888888888888887764
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.4e-29 Score=270.23 Aligned_cols=250 Identities=24% Similarity=0.212 Sum_probs=213.3
Q ss_pred CCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCccc-ccCCcccc-------CCCCCCEEEcCCCccccCCCCC
Q 002892 11 IGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLT-GSFPSWIG-------VFSKLQVLSLRNNSFTGPIPNS 82 (870)
Q Consensus 11 ~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~-~~~~~~~~-------~l~~L~~L~L~~n~i~~~~~~~ 82 (870)
++..++|++|++++|.+ .+|..+... |+.|++++|.++ ..+|..+. .+++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 56678899999999999 588877655 999999999994 46777776 7999999999999999889988
Q ss_pred C--CCCCCCcEEeccCCccccccCcCCCCc-----CCccEEEeecCccceecCCcccCCCCCCeeeccccccccc--ccc
Q 002892 83 L--FNLSSLVRLDSRFNSISGNIPSKIGNL-----TKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGP--IPT 153 (870)
Q Consensus 83 ~--~~l~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~--~~~ 153 (870)
+ ..+++|++|+|++|++++. |..++.+ ++|++|+|++|+|++..|..++.+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 7 8999999999999999966 8888877 9999999999999988889999999999999999998764 334
Q ss_pred cc--cccccceEEEeecccccc--cCCCcccCCCCccceeeecccccccccC-CcccCCCCccEEEccCCcccCCCcccc
Q 002892 154 TI--FNISTIIIINLVGNQLSG--HRPSTMGHSLPNRQFLLLWANRLTGTIP-NSITNASKLIGLDLNSNSLSGQIPNTF 228 (870)
Q Consensus 154 ~~--~~l~~L~~L~l~~N~l~~--~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 228 (870)
.+ ..+++|++|+|++|++++ ..+..++..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 789999999999999984 2344444567899999999999998765 55677899999999999999 677776
Q ss_pred ccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCC
Q 002892 229 GNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDS 278 (870)
Q Consensus 229 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 278 (870)
. ++|++|+|++|+|+.++ .+..+++|++|++++|++++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~p----------~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRNP----------SPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSCC----------CTTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCCh----------hHhhCCCCCEEeccCCCCCC
Confidence 6 89999999999998752 36788999999999999875
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.8e-27 Score=270.03 Aligned_cols=107 Identities=29% Similarity=0.378 Sum_probs=62.7
Q ss_pred ccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 361 SLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
+|+.|++++|.++. +|.. +++|+.|+|++|.|++ +| ..+++|+.|+|++|+|+. +|. .+++|+.|+|+
T Consensus 202 ~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 202 ELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred hhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCC
Confidence 45555555555552 2221 2455666666666653 34 334566666666666663 333 45666677777
Q ss_pred CCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcc
Q 002892 441 RNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILS 480 (870)
Q Consensus 441 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 480 (870)
+|+|+ .+|..|.++++|+.|+|++|.+++.+|..+..++
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 77766 4566666777777777777777666666655554
No 314
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=7.7e-29 Score=265.13 Aligned_cols=260 Identities=20% Similarity=0.167 Sum_probs=180.3
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
..++.++++.+.+...++..+..+++|++|++++|.+++..|..++.+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 346677888888875555556677789999999999987777888889999999999999886544 888889999999
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|++++. + ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|++|++++|++++.
T Consensus 88 s~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (317)
T 3o53_A 88 NNNYVQEL-L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (317)
T ss_dssp CSSEEEEE-E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEE
T ss_pred cCCccccc-c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcc
Confidence 99988743 2 2378889999999888665543 56788888888888877777888888888888888888766
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEW 254 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 254 (870)
.+..+...+++|++|+|++|++++. + ....+++|++|+|++|++++. |..|..+++|+.|+|++|.++.
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-------- 228 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-------- 228 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE--------
T ss_pred cHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc--------
Confidence 5555544455666666666666543 2 122355555555555555532 2234444555555444444443
Q ss_pred ccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCcc-ccCCchh
Q 002892 255 SFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLN-GTIPTTL 333 (870)
Q Consensus 255 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~ 333 (870)
+|..+..+++|+.|++++|.+. +.+|..+
T Consensus 229 --------------------------------------------------l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 229 --------------------------------------------------IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp --------------------------------------------------ECTTCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred --------------------------------------------------hhhHhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 2334455666777777777776 5667777
Q ss_pred hchhhHHHHHhc
Q 002892 334 GRLQQLQALLQR 345 (870)
Q Consensus 334 ~~l~~L~~L~l~ 345 (870)
..+++|+.+.+.
T Consensus 259 ~~~~~L~~l~l~ 270 (317)
T 3o53_A 259 SKNQRVQTVAKQ 270 (317)
T ss_dssp HTCHHHHHHHHH
T ss_pred hccccceEEECC
Confidence 777777777666
No 315
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.7e-28 Score=257.08 Aligned_cols=249 Identities=23% Similarity=0.204 Sum_probs=197.3
Q ss_pred ccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccC
Q 002892 235 STLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRG 314 (870)
Q Consensus 235 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~ 314 (870)
++++.+++.++.++.. ..++|++|++++|.+.+ ..+..+..+++
T Consensus 14 ~~~~c~~~~l~~ip~~-----------~~~~l~~L~l~~n~i~~-------------------------~~~~~~~~~~~ 57 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-----------IPAASQRIFLHGNRISH-------------------------VPAASFRACRN 57 (285)
T ss_dssp CEEECCSSCCSSCCTT-----------CCTTCSEEECTTSCCCE-------------------------ECTTTTTTCTT
T ss_pred eEEEcCcCCcccCCcC-----------CCCCceEEEeeCCcCCc-------------------------cCHHHcccCCC
Confidence 4566666666654321 12456666666666654 34455666777
Q ss_pred CcEEEeeCCCccccCCchhhchhhHHHHHhcCC--CCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecC
Q 002892 315 LIALSLFTNDLNGTIPTTLGRLQQLQALLQRNN--LNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLS 392 (870)
Q Consensus 315 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~--~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 392 (870)
|++|++++|.+.+..|..|..+++|++|++++| +....|..+..+++|++|+|++|++++..|..|..+++|++|+++
T Consensus 58 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 137 (285)
T 1ozn_A 58 LTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQ 137 (285)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECC
Confidence 777777777777766777777777777777744 444447788899999999999999998889999999999999999
Q ss_pred CCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCC
Q 002892 393 SNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEI 472 (870)
Q Consensus 393 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 472 (870)
+|.+++..+..|..+++|++|+|++|++++..+..|.++++|+.|++++|.+++..|..|..+++|+.|+|++|++++..
T Consensus 138 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 138 DNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCC
Confidence 99999877778999999999999999999877778999999999999999999988999999999999999999999877
Q ss_pred CcchhhccccceeeccCCcccccCCCCCccccccc-ccccccccccCCC
Q 002892 473 PKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLA-QSFLWNYALCGPP 520 (870)
Q Consensus 473 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~-~~~~~n~~~c~~~ 520 (870)
+..+..+++|+.|++++|+|+|.++... +..|.. .....+...|..|
T Consensus 218 ~~~~~~l~~L~~L~l~~N~~~c~~~~~~-~~~~l~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 218 TEALAPLRALQYLRLNDNPWVCDCRARP-LWAWLQKFRGSSSEVPCSLP 265 (285)
T ss_dssp HHHHTTCTTCCEEECCSSCEECSGGGHH-HHHHHHHCCSEECCCBEEES
T ss_pred HHHcccCcccCEEeccCCCccCCCCcHH-HHHHHHhcccccCccccCCc
Confidence 7789999999999999999999888542 223322 2234455556555
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1e-26 Score=267.94 Aligned_cols=268 Identities=24% Similarity=0.291 Sum_probs=220.8
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
.+++.|++++|+++ .+|..+. ++|++|++++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 46899999999999 6887776 89999999999999 6776 5789999999999998 5666 7799999999
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|+++ .+|. .+++|+.|++++|+|++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|++++.
T Consensus 109 s~N~l~-~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l 176 (622)
T 3g06_A 109 FSNPLT-HLPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSL 176 (622)
T ss_dssp CSCCCC-CCCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC
T ss_pred cCCcCC-CCCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCC
Confidence 999998 4555 56889999999999994 6654 4889999999999985 343 357899999999999864
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEW 254 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 254 (870)
| ..+++|+.|++++|++++ +|.. .++|+.|++++|.++. +|.. +++|+.|+|++|.|+.++
T Consensus 177 -~----~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~lp------ 237 (622)
T 3g06_A 177 -P----MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLP------ 237 (622)
T ss_dssp -C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCC------
T ss_pred -c----ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCcCC------
Confidence 3 346899999999999995 4543 4789999999999984 4443 478999999999998754
Q ss_pred ccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhh
Q 002892 255 SFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLG 334 (870)
Q Consensus 255 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 334 (870)
..+++|+.|++++|+|..+++ ...+|+.|++++|+++ .+|..+.++++|+.|+|++|.+++..|..+.
T Consensus 238 ------~~l~~L~~L~Ls~N~L~~lp~-----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 238 ------VLPSELKELMVSGNRLTSLPM-----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp ------CCCTTCCEEECCSSCCSCCCC-----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred ------CCCCcCcEEECCCCCCCcCCc-----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 345789999999999997644 3457888999999888 6788889999999999999999876666554
Q ss_pred ch
Q 002892 335 RL 336 (870)
Q Consensus 335 ~l 336 (870)
.+
T Consensus 306 ~L 307 (622)
T 3g06_A 306 EI 307 (622)
T ss_dssp HH
T ss_pred hc
Confidence 44
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.8e-29 Score=267.49 Aligned_cols=268 Identities=19% Similarity=0.177 Sum_probs=198.1
Q ss_pred cceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccc
Q 002892 160 TIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNI 239 (870)
Q Consensus 160 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 239 (870)
+++.++++.+.+..... .+...+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALA-SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHH-HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHH-HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 34556667776653322 333456677888888888877666777777788888888887775443 777777888888
Q ss_pred cccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEE
Q 002892 240 RANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALS 319 (870)
Q Consensus 240 ~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~ 319 (870)
++|.++.++ ..++|++|++++|++.++. + ..+++|+.|+
T Consensus 88 s~n~l~~l~-------------~~~~L~~L~l~~n~l~~~~-------------------------~---~~~~~L~~L~ 126 (317)
T 3o53_A 88 NNNYVQELL-------------VGPSIETLHAANNNISRVS-------------------------C---SRGQGKKNIY 126 (317)
T ss_dssp CSSEEEEEE-------------ECTTCCEEECCSSCCSEEE-------------------------E---CCCSSCEEEE
T ss_pred cCCcccccc-------------CCCCcCEEECCCCccCCcC-------------------------c---cccCCCCEEE
Confidence 877776532 2367777777777766431 1 1246688888
Q ss_pred eeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccc-cccccceEecCCCccCC
Q 002892 320 LFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFW-SLEYILRIDLSSNSLSG 398 (870)
Q Consensus 320 L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~ 398 (870)
+++|++++..+ ..+..+++|++|+|++|++++..+..+. .+++|+.|+|++|.+++
T Consensus 127 l~~N~l~~~~~-----------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 183 (317)
T 3o53_A 127 LANNKITMLRD-----------------------LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (317)
T ss_dssp CCSSCCCSGGG-----------------------BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCCCCCCCccc-----------------------hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc
Confidence 88888875333 3455667889999999999887777764 78899999999999985
Q ss_pred CCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCccc-CCCCcchh
Q 002892 399 SLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLS-GEIPKSFE 477 (870)
Q Consensus 399 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~ 477 (870)
. |. ...+++|++|+|++|+|++. |..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.++ +.+|..+.
T Consensus 184 ~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 184 V-KG-QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp E-EC-CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred c-cc-ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 4 33 33588999999999999854 445888899999999999998 46778888999999999999998 67788888
Q ss_pred hccccceeeccC-CcccccCCC
Q 002892 478 ILSHLKRLNVSH-NRLEGKIPT 498 (870)
Q Consensus 478 ~l~~L~~L~ls~-N~l~~~~p~ 498 (870)
.+++|+.|++++ +.++|..|.
T Consensus 260 ~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 260 KNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSSSSC
T ss_pred ccccceEEECCCchhccCCchh
Confidence 899999999984 456766554
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.2e-28 Score=260.97 Aligned_cols=233 Identities=19% Similarity=0.205 Sum_probs=201.4
Q ss_pred cCCCCCCCCCCCCeecCCCCccc-cCCCcccc-------CCCCCcEEEccCCcccccCCccc--cCCCCCCEEEcCCCcc
Q 002892 6 TVPPHIGNLSFLMYLDISENNFR-GYLPNELG-------QLRRLKFLGFAYNDLTGSFPSWI--GVFSKLQVLSLRNNSF 75 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~-~~~p~~~~-------~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~n~i 75 (870)
++|+.+... |+.|+|++|+++ ..+|..+. .+++|++|++++|++++.+|..+ +.+++|++|+|++|++
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 456655544 999999999994 45676665 79999999999999998899876 9999999999999999
Q ss_pred ccCCCCCCCCC-----CCCcEEeccCCccccccCcCCCCcCCccEEEeecCcccee--cCCcc--cCCCCCCeeeccccc
Q 002892 76 TGPIPNSLFNL-----SSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGE--IPNEI--GNLKNLADLVLALNN 146 (870)
Q Consensus 76 ~~~~~~~~~~l-----~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~l--~~l~~L~~L~L~~n~ 146 (870)
++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|++++|++.+. .+..+ ..+++|++|+|++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 966 8888887 9999999999999987789999999999999999998754 23344 889999999999999
Q ss_pred ccc---cccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCC
Q 002892 147 LIG---PIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQ 223 (870)
Q Consensus 147 l~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 223 (870)
+++ .....+.++++|++|++++|++++..|...+..+++|++|+|++|+++ .+|..+. ++|++|||++|+|++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 983 223444578999999999999998887666667899999999999999 6787776 8999999999999976
Q ss_pred Ccccccccccccccccccccccc
Q 002892 224 IPNTFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 224 ~~~~~~~l~~L~~L~L~~N~l~~ 246 (870)
|. +..+++|++|+|++|.++.
T Consensus 290 -p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 -PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -CC-TTTSCEEEEEECTTCTTTC
T ss_pred -hh-HhhCCCCCEEeccCCCCCC
Confidence 65 9999999999999999875
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=2.2e-28 Score=280.26 Aligned_cols=185 Identities=19% Similarity=0.108 Sum_probs=131.3
Q ss_pred eeccccceeEEEEE-ecCCcEEEEEEeechh----------hHHHHHHHHHHHHHHhc-CCCceeEEeeeeeeCCeeEEE
Q 002892 592 LLGAGSFGSVYKGT-LFDGTNVAIKVFNLQL----------ERAFRSFESECEVLRNV-RHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 592 ~lg~G~~g~v~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 659 (870)
..+.|+.|....++ ...|+.||+|++.+.. +...+++.+|+++++++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35566666665554 3358999999997542 34456799999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||++|++|.+++...+. ++.. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999986653 5554 48899999999999 6779999999999999999999999999998764332
Q ss_pred CcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCC
Q 002892 740 DSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKP 786 (870)
Q Consensus 740 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p 786 (870)
......+||++|+|||++.+ .+..++|+||+|++.+++.++..|
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 22344679999999999865 457789999999999888766544
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=9e-28 Score=271.73 Aligned_cols=236 Identities=20% Similarity=0.178 Sum_probs=135.7
Q ss_pred CCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCccccccccc
Q 002892 183 LPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTN 262 (870)
Q Consensus 183 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 262 (870)
+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|+.++ .
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------------~ 97 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-------------V 97 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-------------E
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-------------C
Confidence 3456666666666665555566666666666666666654333 556666666666666655422 1
Q ss_pred ccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHH
Q 002892 263 CNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQAL 342 (870)
Q Consensus 263 l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 342 (870)
.++|++|++++|.+.++. + ..+++|+.|++++|.+++..|
T Consensus 98 ~~~L~~L~L~~N~l~~~~-------------------------~---~~l~~L~~L~L~~N~l~~~~~------------ 137 (487)
T 3oja_A 98 GPSIETLHAANNNISRVS-------------------------C---SRGQGKKNIYLANNKITMLRD------------ 137 (487)
T ss_dssp CTTCCEEECCSSCCCCEE-------------------------E---CCCSSCEEEECCSSCCCSGGG------------
T ss_pred CCCcCEEECcCCcCCCCC-------------------------c---cccCCCCEEECCCCCCCCCCc------------
Confidence 245555555555554321 1 123455666666666654333
Q ss_pred HhcCCCCCCCcccccCccccceeecCCcccCCCCCcccc-cccccceEecCCCccCCCCcccccCCccCCEEEccCCccC
Q 002892 343 LQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFW-SLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLS 421 (870)
Q Consensus 343 ~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 421 (870)
..++.+++|++|+|++|.+++..|..|. .+++|+.|+|++|.+++. | .+..+++|+.|+|++|+|+
T Consensus 138 -----------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 138 -----------LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp -----------BCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC
T ss_pred -----------hhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEEECCCCCCC
Confidence 2334445666666666666665665554 566666666666666643 2 2234666666666666666
Q ss_pred CcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCccc-CCCCcchhhccccceeecc
Q 002892 422 GNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLS-GEIPKSFEILSHLKRLNVS 488 (870)
Q Consensus 422 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls 488 (870)
+.+| .|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+. +.+|..+..++.|+.++++
T Consensus 205 ~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 205 FMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 4333 36666666666666666664 4555666666666666666665 4555556666666666665
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=6.5e-27 Score=264.70 Aligned_cols=193 Identities=23% Similarity=0.172 Sum_probs=124.6
Q ss_pred CCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEee
Q 002892 40 RLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFA 119 (870)
Q Consensus 40 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 119 (870)
+|++|+|++|.+++..|..|+.+++|++|+|++|.|++..| +..+++|++|+|++|.|++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 67777777777776666777777777777777777775444 7777777777777777773322 2677777777
Q ss_pred cCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccc
Q 002892 120 DNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGT 199 (870)
Q Consensus 120 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 199 (870)
+|.|++..+. .+++|+.|+|++|++++..|..+..+++|+.|+|++|.+++..|..+...+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 7777765543 3466777777777777777777777777777777777777665555544455556666666655543
Q ss_pred cCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccc
Q 002892 200 IPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLT 245 (870)
Q Consensus 200 ~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 245 (870)
.+ +..+++|++|+|++|.|++..| .|..+++|+.|+|++|.++
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV 227 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc
Confidence 21 2235556666666666554322 2445555555555554444
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=4.1e-26 Score=239.08 Aligned_cols=151 Identities=23% Similarity=0.275 Sum_probs=120.5
Q ss_pred ccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCC-CcccccCCccCCEEEccCCccCCcccccccCCCCC
Q 002892 356 LSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGS-LPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDL 434 (870)
Q Consensus 356 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 434 (870)
|..+++|++|++++|++++..+..|..+++|++|++++|.+++. +|..|.++++|++|+|++|++++..+..|..+.+|
T Consensus 96 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 175 (276)
T 2z62_A 96 FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175 (276)
T ss_dssp TTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTC
T ss_pred hcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhc
Confidence 44556777777777777766666777888888888888888753 57888888888888888888887777777777777
Q ss_pred C----EEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCccccccc
Q 002892 435 I----TLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLA 507 (870)
Q Consensus 435 ~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~ 507 (870)
+ .|++++|.+++..+..+.. .+|+.|+|++|++++..+..|..+++|+.|++++|+|+|.+|....+..|..
T Consensus 176 ~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l~~~~~ 251 (276)
T 2z62_A 176 PLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLN 251 (276)
T ss_dssp TTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHHHHHHH
T ss_pred cccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHHHHHHHH
Confidence 6 8999999998766665554 4899999999999977777789999999999999999999987655555543
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1.8e-29 Score=295.84 Aligned_cols=244 Identities=11% Similarity=0.126 Sum_probs=121.8
Q ss_pred eecCCCCccccCCCccccCCCCCcEEEccCCcccc---cCCcc------------ccCCCCCCEEEcCCCccccCCCCCC
Q 002892 19 YLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTG---SFPSW------------IGVFSKLQVLSLRNNSFTGPIPNSL 83 (870)
Q Consensus 19 ~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~---~~~~~------------~~~l~~L~~L~L~~n~i~~~~~~~~ 83 (870)
.++++++... ..+..+..+++|+.|++++|.... ..|.. ...+++|++|+|++|.+++..+..+
T Consensus 47 ~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l 125 (594)
T 2p1m_B 47 KVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELI 125 (594)
T ss_dssp EEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHH
Confidence 4555555433 122345667888888888875221 11211 2345677777777777665444444
Q ss_pred C-CCCCCcEEeccCC-ccccc-cCcCCCCcCCccEEEeecCccceecCCccc----CCCCCCeeeccccc--ccc-cccc
Q 002892 84 F-NLSSLVRLDSRFN-SISGN-IPSKIGNLTKLVHLNFADNNLRGEIPNEIG----NLKNLADLVLALNN--LIG-PIPT 153 (870)
Q Consensus 84 ~-~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~----~l~~L~~L~L~~n~--l~~-~~~~ 153 (870)
. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+. .+++|++|++++|. +.. .++.
T Consensus 126 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~ 205 (594)
T 2p1m_B 126 AKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALER 205 (594)
T ss_dssp HHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHH
T ss_pred HHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHH
Confidence 3 5667777777777 44422 333334667777777777776643333332 45567777777665 211 1112
Q ss_pred cccccccceEEEeecc-cccccCCCcccCCCCccceeeec-------ccccccccCCcccCCCCccEE-EccCCcccCCC
Q 002892 154 TIFNISTIIIINLVGN-QLSGHRPSTMGHSLPNRQFLLLW-------ANRLTGTIPNSITNASKLIGL-DLNSNSLSGQI 224 (870)
Q Consensus 154 ~~~~l~~L~~L~l~~N-~l~~~~~~~~~~~l~~L~~L~L~-------~n~l~~~~~~~~~~l~~L~~L-~Ls~N~i~~~~ 224 (870)
.+.++++|++|++++| .+.+ ++..+ ..+++|+.|++. .|.+.+ ++..+.++++|+.| .+.+.... .+
T Consensus 206 l~~~~~~L~~L~L~~~~~~~~-l~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~~-~l 281 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRAVPLEK-LATLL-QRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVPA-YL 281 (594)
T ss_dssp HHHHCTTCCEEECCTTSCHHH-HHHHH-HHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCGG-GG
T ss_pred HHHhCCCCcEEecCCCCcHHH-HHHHH-hcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccchh-hH
Confidence 2233466666666666 2222 22221 234555555532 223332 22244555555555 33332221 23
Q ss_pred ccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCC
Q 002892 225 PNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSN 274 (870)
Q Consensus 225 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 274 (870)
+..+..+++|++|+|++|.++... +...+..+++|++|++++|
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~-------l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYD-------LVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHH-------HHHHHTTCTTCCEEEEEGG
T ss_pred HHHHHhhCCCCEEEccCCCCCHHH-------HHHHHhcCCCcCEEeCcCc
Confidence 333334555555555555543211 1112334555555555544
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.2e-25 Score=232.27 Aligned_cols=222 Identities=23% Similarity=0.224 Sum_probs=127.7
Q ss_pred ecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCcc
Q 002892 20 LDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSI 99 (870)
Q Consensus 20 L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i 99 (870)
++.++.+++ .+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|++++..+..+.++++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444445554 3444332 3556666666666544444555566666666666666544444556666666666666666
Q ss_pred ccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccc-ccccccccccceEEEeecccccccCCCc
Q 002892 100 SGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGP-IPTTIFNISTIIIINLVGNQLSGHRPST 178 (870)
Q Consensus 100 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 178 (870)
++..+..|..+++|++|++++|++++..+..+..+++|++|++++|++++. +|..+.++++|++|++++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 555455556666666666666666544444555666666666666665542 3555666666666666666665544433
Q ss_pred ccCCCCccc----eeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccccc
Q 002892 179 MGHSLPNRQ----FLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 179 ~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 246 (870)
+. .+++|+ .|++++|++++..+..+. ..+|++|++++|++++..+..|..+++|+.|+|++|.++.
T Consensus 169 ~~-~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 169 LR-VLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GH-HHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred hh-hhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 32 133333 566666666644444433 3367777777777776656666777777777777777664
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3e-25 Score=231.38 Aligned_cols=215 Identities=24% Similarity=0.253 Sum_probs=179.6
Q ss_pred ccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHh
Q 002892 265 KLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQ 344 (870)
Q Consensus 265 ~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 344 (870)
..+.+++++|.++.++.. ++..++.|++++|++++..+..+..+++|++|++++|+++...
T Consensus 17 ~~~~l~~~~~~l~~ip~~----~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~--------------- 77 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSN----IPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP--------------- 77 (270)
T ss_dssp TTTEEECTTSCCSSCCSC----CCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC---------------
T ss_pred CCCEEEccCCCCCccCCC----CCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC---------------
Confidence 578899999999875332 2245666677777766655566666777777777766665322
Q ss_pred cCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcc
Q 002892 345 RNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNI 424 (870)
Q Consensus 345 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 424 (870)
+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|+|++..
T Consensus 78 --------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 78 --------AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp --------TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred --------hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 234577889999999999999888889999999999999999999888888999999999999999999887
Q ss_pred cccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccc
Q 002892 425 PITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRN 504 (870)
Q Consensus 425 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 504 (870)
+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.++....+.+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~ 229 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNGIIYMAK 229 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSSSHHHHH
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCccHHHHHH
Confidence 77899999999999999999988888899999999999999999977777899999999999999999999885444555
Q ss_pred cc
Q 002892 505 FL 506 (870)
Q Consensus 505 ~~ 506 (870)
|.
T Consensus 230 ~l 231 (270)
T 2o6q_A 230 WL 231 (270)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=3.4e-29 Score=293.57 Aligned_cols=437 Identities=15% Similarity=0.125 Sum_probs=297.8
Q ss_pred CCCCCCCCeecCCCCcccc---CCCc------------cccCCCCCcEEEccCCcccccCCcccc-CCCCCCEEEcCCC-
Q 002892 11 IGNLSFLMYLDISENNFRG---YLPN------------ELGQLRRLKFLGFAYNDLTGSFPSWIG-VFSKLQVLSLRNN- 73 (870)
Q Consensus 11 ~~~l~~L~~L~ls~n~l~~---~~p~------------~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n- 73 (870)
+..+++|++|++++|.... ..|. ....+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 4567899999999985321 1221 134688999999999999877777675 6899999999999
Q ss_pred ccccC-CCCCCCCCCCCcEEeccCCccccccCcCC----CCcCCccEEEeecCc--cce-ecCCcccCCCCCCeeecccc
Q 002892 74 SFTGP-IPNSLFNLSSLVRLDSRFNSISGNIPSKI----GNLTKLVHLNFADNN--LRG-EIPNEIGNLKNLADLVLALN 145 (870)
Q Consensus 74 ~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~~----~~l~~L~~L~l~~N~--l~~-~~~~~l~~l~~L~~L~L~~n 145 (870)
.++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|++++|. +.. .++..+.++++|++|++++|
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 56532 33344589999999999999875444333 467899999999997 321 12222345799999999999
Q ss_pred cccccccccccccccceEEEeecc-------cccccCCCcccCCCCcccee-eecccccccccCCcccCCCCccEEEccC
Q 002892 146 NLIGPIPTTIFNISTIIIINLVGN-------QLSGHRPSTMGHSLPNRQFL-LLWANRLTGTIPNSITNASKLIGLDLNS 217 (870)
Q Consensus 146 ~l~~~~~~~~~~l~~L~~L~l~~N-------~l~~~~~~~~~~~l~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 217 (870)
...+.++..+..+++|++|+++.+ .+.+..+ .+ ..+++|+.| .+.+... +.++..+..+++|++|+|++
T Consensus 222 ~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~-~l-~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~ 298 (594)
T 2p1m_B 222 VPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV-AL-SGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSY 298 (594)
T ss_dssp SCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH-HH-HTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTT
T ss_pred CcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHH-HH-hcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccC
Confidence 433347888889999999996554 3433222 23 357888888 4544433 24555666789999999999
Q ss_pred CcccCCCcc-ccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhc
Q 002892 218 NSLSGQIPN-TFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYA 296 (870)
Q Consensus 218 N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l 296 (870)
|.+++.... .+..+++|+.|++++| ++... +......+++|++|+++++.-.+ ..
T Consensus 299 ~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~-------l~~l~~~~~~L~~L~L~~~~~~g----------------~~ 354 (594)
T 2p1m_B 299 ATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAG-------LEVLASTCKDLRELRVFPSEPFV----------------ME 354 (594)
T ss_dssp CCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHH-------HHHHHHHCTTCCEEEEECSCTTC----------------SS
T ss_pred CCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHH-------HHHHHHhCCCCCEEEEecCcccc----------------cc
Confidence 997743333 3568999999999998 44311 12223458899999996532110 00
Q ss_pred ccccccccCchhh-hCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecC--C----
Q 002892 297 HECKLKGSIPKEI-GNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLG--S---- 369 (870)
Q Consensus 297 ~~n~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls--~---- 369 (870)
..+.+++.....+ ..+++|+.|.++.|.+++..+..+ ...+++|+.|+|+ +
T Consensus 355 ~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l----------------------~~~~~~L~~L~L~~~~~~~~ 412 (594)
T 2p1m_B 355 PNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI----------------------ARNRPNMTRFRLCIIEPKAP 412 (594)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH----------------------HHHCTTCCEEEEEESSTTCC
T ss_pred cCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH----------------------HhhCCCcceeEeecccCCCc
Confidence 0111221112222 347889999888888874322211 1235778888888 4
Q ss_pred cccCCCCC-----cccccccccceEecCCCccCCCCcccccC-CccCCEEEccCCccCCcccccc-cCCCCCCEEEcCCC
Q 002892 370 NQLTSSIP-----SSFWSLEYILRIDLSSNSLSGSLPSDIQN-LKVLIYLNLSRNQLSGNIPITI-GGLKDLITLSLARN 442 (870)
Q Consensus 370 N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N 442 (870)
|.++.... ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ .++++|+.|+|++|
T Consensus 413 ~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 413 DYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp CTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred ccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 55653221 2256778999999987 666555555554 8899999999999987666555 67899999999999
Q ss_pred cccCcccc-cccCCCCCCeEecCCCcccCCCCcch-hhccccceeeccCCcccccCC
Q 002892 443 RFQDSIPD-SFGSLTSLEYLDLSNNNLSGEIPKSF-EILSHLKRLNVSHNRLEGKIP 497 (870)
Q Consensus 443 ~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~p 497 (870)
.+++.... ....+++|+.|++++|+++..-...+ ..+++|+...+..+.-....|
T Consensus 492 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~~~~ 548 (594)
T 2p1m_B 492 PFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAPDSRP 548 (594)
T ss_dssp SCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSCGGGSC
T ss_pred CCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCcccccc
Confidence 99765444 44568999999999999864333334 457888877777765443333
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=6.9e-25 Score=230.54 Aligned_cols=215 Identities=24% Similarity=0.178 Sum_probs=182.7
Q ss_pred cccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhH
Q 002892 260 LTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQL 339 (870)
Q Consensus 260 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 339 (870)
+..+++++++++++|.++.+++.. +..++.|++++|.+++..+..+..+++|+.|++++|.+++..
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~----~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDL----PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ---------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCC----CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE----------
T ss_pred ccccCCccEEECCCCCCCcCCCCC----CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCccc----------
Confidence 566788999999999998765432 246777888888887777777888888888888888776422
Q ss_pred HHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCc
Q 002892 340 QALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQ 419 (870)
Q Consensus 340 ~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 419 (870)
. ...+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++..|..|.++++|++|+|++|+
T Consensus 72 --------------~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 72 --------------V-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp --------------C-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred --------------C-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 1 146789999999999998 678889999999999999999998878899999999999999999
Q ss_pred cCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCC
Q 002892 420 LSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTN 499 (870)
Q Consensus 420 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 499 (870)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|.|.+. .
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~-~ 213 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCE-I 213 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGG-G
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCc-c
Confidence 99888888999999999999999999877788899999999999999999 788888889999999999999999874 2
Q ss_pred Ccccccc
Q 002892 500 GPFRNFL 506 (870)
Q Consensus 500 ~~~~~~~ 506 (870)
..+..|.
T Consensus 214 ~~l~~wl 220 (290)
T 1p9a_G 214 LYFRRWL 220 (290)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3344443
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.1e-23 Score=219.65 Aligned_cols=203 Identities=21% Similarity=0.228 Sum_probs=128.3
Q ss_pred CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 16 FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
..+.+++++++++ .+|..+. ++|+.|++++|++++..+..|+.+++|++|+|++|+|++..+..+.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4567777777776 4565443 567777777777775555567777777777777777764444445667777777777
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccC
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHR 175 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 175 (870)
+|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|+++
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--- 170 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK--- 170 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS---
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc---
Confidence 77776544555666777777777777776555556666666666666666666555545555555555555555554
Q ss_pred CCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccccc
Q 002892 176 PSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 176 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 246 (870)
+..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 171 ----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 171 ----------------------RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp ----------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ----------------------EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 3444445556666666666666665555556666666666666666543
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.2e-24 Score=223.82 Aligned_cols=222 Identities=25% Similarity=0.285 Sum_probs=166.8
Q ss_pred CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 208 SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 208 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
.++..+++..+.+.+. ..+..+++|+.|++++|.++.+. .+..+++|++|++++|++.++
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~~----------~l~~l~~L~~L~l~~n~l~~~-------- 78 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSVQ----------GIQYLPNVRYLALGGNKLHDI-------- 78 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCCT----------TGGGCTTCCEEECTTSCCCCC--------
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccccc----------ccccCCCCcEEECCCCCCCCc--------
Confidence 3455666666666532 34566777777777777766532 456677777777777766532
Q ss_pred ccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeec
Q 002892 288 SASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHL 367 (870)
Q Consensus 288 ~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~L 367 (870)
..+..+++|++|++++|.+++..+ ..|..+++|++|+|
T Consensus 79 -------------------~~l~~l~~L~~L~L~~n~l~~~~~-----------------------~~~~~l~~L~~L~L 116 (272)
T 3rfs_A 79 -------------------SALKELTNLTYLILTGNQLQSLPN-----------------------GVFDKLTNLKELVL 116 (272)
T ss_dssp -------------------GGGTTCTTCCEEECTTSCCCCCCT-----------------------TTTTTCTTCCEEEC
T ss_pred -------------------hhhcCCCCCCEEECCCCccCccCh-----------------------hHhcCCcCCCEEEC
Confidence 245666777777777777764333 34566678888888
Q ss_pred CCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCc
Q 002892 368 GSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 368 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 447 (870)
++|++++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..+..|+++++|+.|++++|++++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (272)
T 3rfs_A 117 VENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSV 196 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCcc
Confidence 88888877777888888888888888888877777788888888888888888877777788888888888888888887
Q ss_pred ccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 448 IPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 448 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
.|..|..+++|+.|+|++|.+.+. +++|+.|++++|.++|.+|.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 197 PDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred CHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 777788888888888888888754 44688888888888888886
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=7.6e-24 Score=222.54 Aligned_cols=203 Identities=22% Similarity=0.208 Sum_probs=149.9
Q ss_pred CCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCc
Q 002892 11 IGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLV 90 (870)
Q Consensus 11 ~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 90 (870)
+.++++++++++++|+++ .+|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.|++. +.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 677888899999999888 5666554 6888999999988877778888888999999999988853 333 7888888
Q ss_pred EEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccc
Q 002892 91 RLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQ 170 (870)
Q Consensus 91 ~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (870)
+|+|++|+++ .+|..+..+++|++|++++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 8888888887 777788888888888888888887666778888888888888888887666667777777777777777
Q ss_pred ccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCccc
Q 002892 171 LSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLS 221 (870)
Q Consensus 171 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 221 (870)
+++..+ ..+..+++|+.|+|++|+++ .+|..+....+|+.|+|++|++.
T Consensus 160 l~~l~~-~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPA-GLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCT-TTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccCH-HHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 764332 33334555555555555555 34444555555555555555543
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=6e-24 Score=221.73 Aligned_cols=218 Identities=19% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
..+..++++++.+.+. ..+..+++|+.|++++|.++ .++ .++.+++|++|+|++|.+++ + ..+.++++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 3445566666666533 23556667777777777766 333 36667777777777777763 2 35667777777777
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|++++..+..|+.+++|++|++++|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 77777755555567777777777777777755555667777777777777777766666666777777777777777654
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccccccc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 246 (870)
.+..+ ..+++|++|++++|++++..+..+..+++|++|++++|.+.+ .+++|+.|+++.|.++.
T Consensus 173 ~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 173 PEGVF-DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSG 236 (272)
T ss_dssp CTTTT-TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGG
T ss_pred CHHHh-cCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCC
Confidence 44333 346777777777777776666667777788888888887663 34567777777777765
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=8.3e-25 Score=249.30 Aligned_cols=186 Identities=19% Similarity=0.220 Sum_probs=146.0
Q ss_pred CCCCeeccccceeEEEEEecCCcEEEEEEeechh--------hHHHHHHHHHHHHHHhcCCCceeEEeeeeeeCCeeEEE
Q 002892 588 NECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQL--------ERAFRSFESECEVLRNVRHRNLIKIFSSCCNLDFKALV 659 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 659 (870)
...++||+|+||.||+|. ..++.+++|+..... ....+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS-YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEE-CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEE-ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 345689999999999995 457889998864321 12245689999999999999999666666677788999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCC
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDD 739 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 739 (870)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+||+++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5689999999999999 666999999999999998 99999999999774422
Q ss_pred Ccc-----cccccccccccCCcccccC--CCcCcccchHhHHHHHHHHHhCCCCCC
Q 002892 740 DSV-----TQTMTMATIGYMAPEYASD--GIISPKCDVYSYGVLLMETFTRKKPTD 788 (870)
Q Consensus 740 ~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~il~elltg~~p~~ 788 (870)
... ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1234579999999999986 567888999999999999888887764
No 333
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1e-23 Score=215.60 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=126.7
Q ss_pred eecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCc-cccCCCCCCCCCCCCcEEeccC-
Q 002892 19 YLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNS-FTGPIPNSLFNLSSLVRLDSRF- 96 (870)
Q Consensus 19 ~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~- 96 (870)
.+++..++++ .+|. +. .+|++|++++|++++..+..|+.+++|++|+|++|+ +++..+..|.++++|++|++++
T Consensus 15 ~~~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~ 90 (239)
T 2xwt_C 15 DFRVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90 (239)
T ss_dssp TTEEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEE
T ss_pred cceeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCC
Confidence 3333333455 4665 33 378888888888876666677778888888888886 7755555777788888888887
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCC---eeecccc-cccccccccccccccce-EEEeecccc
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLA---DLVLALN-NLIGPIPTTIFNISTII-IINLVGNQL 171 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~l~~N~l 171 (870)
|++++..+..|..+++|++|++++|++++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|++
T Consensus 91 n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 91 RNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp TTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 77775555677777888888888888774 554 66777776 7777777 77666666667777777 777777776
Q ss_pred cccCCCcccCCCCccceeeecccc-cccccCCcccCC-CCccEEEccCCccc
Q 002892 172 SGHRPSTMGHSLPNRQFLLLWANR-LTGTIPNSITNA-SKLIGLDLNSNSLS 221 (870)
Q Consensus 172 ~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l-~~L~~L~Ls~N~i~ 221 (870)
+. +|...+.. ++|+.|++++|+ +++..+..|..+ ++|++|++++|+++
T Consensus 169 ~~-i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 169 TS-VQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CE-ECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred cc-cCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 63 33322222 455555555553 554444455555 55555555555555
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=8.9e-26 Score=246.18 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=37.8
Q ss_pred ecCCCCccccCCCccccCCCCCcEEEccCCcccccCC----ccccCCC-CCCEEEcCCCccccCCCCCCCCC-----CCC
Q 002892 20 LDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFP----SWIGVFS-KLQVLSLRNNSFTGPIPNSLFNL-----SSL 89 (870)
Q Consensus 20 L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~L 89 (870)
++|+.|++++.+|..+...++|++|+|++|.+++..+ +.+..++ +|++|+|++|.|++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3455555554444444444445555555555553333 3444444 45555555555544333333332 444
Q ss_pred cEEeccCCccc
Q 002892 90 VRLDSRFNSIS 100 (870)
Q Consensus 90 ~~L~L~~n~i~ 100 (870)
++|+|++|+++
T Consensus 83 ~~L~Ls~n~l~ 93 (362)
T 3goz_A 83 TSLNLSGNFLS 93 (362)
T ss_dssp CEEECCSSCGG
T ss_pred cEEECcCCcCC
Confidence 44444444444
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.2e-24 Score=237.14 Aligned_cols=263 Identities=17% Similarity=0.216 Sum_probs=139.9
Q ss_pred eeecccccccccCCcccCCCCccEEEccCCcccCCCc----ccccccc-ccccccccccccccccCCCCCcccccccccc
Q 002892 189 LLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIP----NTFGNLR-HLSTLNIRANYLTTETSSNGEWSFLSSLTNC 263 (870)
Q Consensus 189 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l 263 (870)
+.++.|++++.+|..+...++|++|||++|.+++..+ +.|..++ +|++|+|++|.++..... .+...+...
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~----~l~~~l~~~ 78 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSD----ELVQILAAI 78 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHH----HHHHHHHTS
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHH----HHHHHHhcc
Confidence 3444555555555555555556666666666665554 4555555 566666666666543210 011111222
Q ss_pred -cccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCc-cCCcEEEeeCCCccccCCchhhchhhHHH
Q 002892 264 -NKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNL-RGLIALSLFTNDLNGTIPTTLGRLQQLQA 341 (870)
Q Consensus 264 -~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 341 (870)
++|++|+|++|++.+..+..+. ..+..+ ++|++|++++|++.+..+..+..
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~---------------------~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~------ 131 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELV---------------------KTLAAIPFTITVLDLGWNDFSSKSSSEFKQ------ 131 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHH---------------------HHHHTSCTTCCEEECCSSCGGGSCHHHHHH------
T ss_pred CCCccEEECcCCcCChHHHHHHH---------------------HHHHhCCCCccEEECcCCcCCcHHHHHHHH------
Confidence 5666666666665543222111 123333 56666666666665443332211
Q ss_pred HHhcCCCCCCCcccccCc-cccceeecCCcccCCCCCcc----ccccc-ccceEecCCCccCCCCccccc----CC-ccC
Q 002892 342 LLQRNNLNGPIPTCLSSL-ISLRQLHLGSNQLTSSIPSS----FWSLE-YILRIDLSSNSLSGSLPSDIQ----NL-KVL 410 (870)
Q Consensus 342 L~l~n~~~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~----~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L 410 (870)
.+..+ ++|++|+|++|+++...+.. +..++ +|++|+|++|++++..+..+. .+ ++|
T Consensus 132 -------------~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L 198 (362)
T 3goz_A 132 -------------AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASV 198 (362)
T ss_dssp -------------HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTC
T ss_pred -------------HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCC
Confidence 12221 35666666666666433322 23333 666666666666655544333 23 467
Q ss_pred CEEEccCCccCCc----ccccccC-CCCCCEEEcCCCcccCccc----ccccCCCCCCeEecCCCcccCCCC-------c
Q 002892 411 IYLNLSRNQLSGN----IPITIGG-LKDLITLSLARNRFQDSIP----DSFGSLTSLEYLDLSNNNLSGEIP-------K 474 (870)
Q Consensus 411 ~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p-------~ 474 (870)
++|+|++|+|++. ++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|+|++|++.+..+ .
T Consensus 199 ~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~ 278 (362)
T 3goz_A 199 TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGA 278 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHT
T ss_pred CEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHH
Confidence 7777777776642 3333433 3467777777777765433 334566777777777777543322 2
Q ss_pred chhhccccceeeccCCccccc
Q 002892 475 SFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 475 ~~~~l~~L~~L~ls~N~l~~~ 495 (870)
.+..+++|+.||+++|++...
T Consensus 279 ~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 279 AFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp TSTTCCEEEEECTTSCBCCGG
T ss_pred HhccCCceEEEecCCCcCCCc
Confidence 455666777777777777654
No 336
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=5.4e-25 Score=242.55 Aligned_cols=267 Identities=18% Similarity=0.253 Sum_probs=198.2
Q ss_pred ccCCcccCCCCccEEEccCCcccCCCcc----ccccccccccccccccccccccCC--CCCcccccccccccccceEEcC
Q 002892 199 TIPNSITNASKLIGLDLNSNSLSGQIPN----TFGNLRHLSTLNIRANYLTTETSS--NGEWSFLSSLTNCNKLRALSLG 272 (870)
Q Consensus 199 ~~~~~~~~l~~L~~L~Ls~N~i~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~--~~~~~~~~~l~~l~~L~~L~L~ 272 (870)
.++..+..+++|++|+|++|+|++..+. .|..+++|++|+|++|.+..+... .+...+...+..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4566677788888888888888765443 366788888888888765543211 0001122345788999999999
Q ss_pred CCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhc-hhhHHHHHhcCCCCCC
Q 002892 273 SNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGR-LQQLQALLQRNNLNGP 351 (870)
Q Consensus 273 ~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~l~n~~~~~ 351 (870)
+|++...... .+|..+..+++|+.|+|++|.+....+..+.. +..+....+..
T Consensus 103 ~n~l~~~~~~---------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~----- 156 (386)
T 2ca6_A 103 DNAFGPTAQE---------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAK----- 156 (386)
T ss_dssp SCCCCTTTHH---------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred CCcCCHHHHH---------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcc-----
Confidence 9988752110 35667888999999999999997554444432 22222111111
Q ss_pred CcccccCccccceeecCCcccC-CCCC---cccccccccceEecCCCccCC-----CCcccccCCccCCEEEccCCccC-
Q 002892 352 IPTCLSSLISLRQLHLGSNQLT-SSIP---SSFWSLEYILRIDLSSNSLSG-----SLPSDIQNLKVLIYLNLSRNQLS- 421 (870)
Q Consensus 352 ~p~~~~~l~~L~~L~Ls~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~- 421 (870)
..++|++|+|++|+++ ...+ ..+..+++|+.|+|++|.++. ..|..+..+++|+.|+|++|.|+
T Consensus 157 ------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~ 230 (386)
T 2ca6_A 157 ------NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH 230 (386)
T ss_dssp ------TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH
T ss_pred ------cCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCc
Confidence 1178999999999997 3444 467788999999999999983 34558889999999999999996
Q ss_pred ---CcccccccCCCCCCEEEcCCCcccCc----ccccc--cCCCCCCeEecCCCcccC----CCCcch-hhccccceeec
Q 002892 422 ---GNIPITIGGLKDLITLSLARNRFQDS----IPDSF--GSLTSLEYLDLSNNNLSG----EIPKSF-EILSHLKRLNV 487 (870)
Q Consensus 422 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~l 487 (870)
+.+|..+..+++|+.|+|++|.+++. +|..+ +.+++|+.|+|++|++++ .+|..+ ..+++|+.|++
T Consensus 231 ~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l 310 (386)
T 2ca6_A 231 LGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 310 (386)
T ss_dssp HHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEEC
T ss_pred HHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEc
Confidence 56788899999999999999999876 56666 348999999999999997 478777 66899999999
Q ss_pred cCCcccccCC
Q 002892 488 SHNRLEGKIP 497 (870)
Q Consensus 488 s~N~l~~~~p 497 (870)
++|++++..|
T Consensus 311 ~~N~l~~~~~ 320 (386)
T 2ca6_A 311 NGNRFSEEDD 320 (386)
T ss_dssp TTSBSCTTSH
T ss_pred cCCcCCcchh
Confidence 9999987665
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9.2e-24 Score=225.00 Aligned_cols=226 Identities=19% Similarity=0.185 Sum_probs=158.4
Q ss_pred CCCcEEEccCCccccc----CCccccCCCCCCEEEcCCCccccCCCCCC--CCCCCCcEEeccCCccccccC----cCCC
Q 002892 39 RRLKFLGFAYNDLTGS----FPSWIGVFSKLQVLSLRNNSFTGPIPNSL--FNLSSLVRLDSRFNSISGNIP----SKIG 108 (870)
Q Consensus 39 ~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~----~~~~ 108 (870)
..++.|.+.++.++.. ++. +-.+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALR-VLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHH-HHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHH-hcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 3467777777766521 111 1123568888888888877777776 778888888888888775443 2345
Q ss_pred CcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccc--c--cccccccccceEEEeecccccccCC--CcccCC
Q 002892 109 NLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGP--I--PTTIFNISTIIIINLVGNQLSGHRP--STMGHS 182 (870)
Q Consensus 109 ~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~ 182 (870)
.+++|++|+|++|++++..+..++.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++...+ ..+...
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 677888888888888777777777888888888888876542 2 2233567788888888888763221 122334
Q ss_pred CCccceeeecccccccccCCcccCC---CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccc
Q 002892 183 LPNRQFLLLWANRLTGTIPNSITNA---SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSS 259 (870)
Q Consensus 183 l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 259 (870)
+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|+.++ .
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~----------~ 289 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAP----------Q 289 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCC----------C
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCc----------h
Confidence 6788888888888887767777666 58888888888888 5566654 78888888888888643 2
Q ss_pred cccccccceEEcCCCCCCC
Q 002892 260 LTNCNKLRALSLGSNPLDS 278 (870)
Q Consensus 260 l~~l~~L~~L~L~~N~l~~ 278 (870)
+..+++|+.|++++|++.+
T Consensus 290 ~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 290 PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTSCCCCSCEECSSTTTSC
T ss_pred hhhCCCccEEECcCCCCCC
Confidence 4667888888888888865
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.8e-23 Score=213.91 Aligned_cols=190 Identities=24% Similarity=0.236 Sum_probs=158.0
Q ss_pred hhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCc
Q 002892 291 FQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSN 370 (870)
Q Consensus 291 l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N 370 (870)
.+.++++++.++ .+|..+. ++++.|++++|.+.+ ..+..|..+++|++|+|++|
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~-----------------------~~~~~~~~l~~L~~L~L~~n 69 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLAT-----------------------LSDATFRGLTKLTWLNLDYN 69 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCC-----------------------CCTTTTTTCTTCCEEECTTS
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCc-----------------------cCHhHhcCcccCCEEECCCC
Confidence 344555555555 3443333 355666666666554 33455777889999999999
Q ss_pred ccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccc
Q 002892 371 QLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPD 450 (870)
Q Consensus 371 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 450 (870)
+|++..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+.
T Consensus 70 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 70 QLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG 149 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred cCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH
Confidence 99999999999999999999999999988888899999999999999999988888899999999999999999988888
Q ss_pred cccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccc
Q 002892 451 SFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 451 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
.|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+|.+.....+..|.
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~ 205 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWI 205 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHH
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHHH
Confidence 89999999999999999998888899999999999999999999866544444443
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.9e-25 Score=244.69 Aligned_cols=134 Identities=19% Similarity=0.217 Sum_probs=101.3
Q ss_pred ccCccccceeecCCcccCC-----CCCcccccccccceEecCCCccC----CCCcccccCCccCCEEEccCCccCCc---
Q 002892 356 LSSLISLRQLHLGSNQLTS-----SIPSSFWSLEYILRIDLSSNSLS----GSLPSDIQNLKVLIYLNLSRNQLSGN--- 423 (870)
Q Consensus 356 ~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~--- 423 (870)
+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|+|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 4445677777777777762 34447777888888888888885 46778888889999999999998865
Q ss_pred -ccccc--cCCCCCCEEEcCCCcccC----cccccc-cCCCCCCeEecCCCcccCCCC--cch-hhccccceeeccC
Q 002892 424 -IPITI--GGLKDLITLSLARNRFQD----SIPDSF-GSLTSLEYLDLSNNNLSGEIP--KSF-EILSHLKRLNVSH 489 (870)
Q Consensus 424 -~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~~p--~~~-~~l~~L~~L~ls~ 489 (870)
++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..+ ..+ ..+++++.+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 45666 448999999999999987 477777 668999999999999997664 333 3466666666644
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=8.5e-23 Score=208.74 Aligned_cols=203 Identities=18% Similarity=0.179 Sum_probs=174.2
Q ss_pred cCCCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCc-ccccCCccccCCCCCCEEEcCC-CccccCCCCCC
Q 002892 6 TVPPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYND-LTGSFPSWIGVFSKLQVLSLRN-NSFTGPIPNSL 83 (870)
Q Consensus 6 ~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~ 83 (870)
++|+ +. ++|++|++++|++++..+..|..+++|++|++++|+ +++..+..|..+++|++|+|++ |+|++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5666 43 389999999999998777789999999999999997 8866677899999999999999 99997767789
Q ss_pred CCCCCCcEEeccCCccccccCcCCCCcCCcc---EEEeecC-ccceecCCcccCCCCCC-eeeccccccccccccccccc
Q 002892 84 FNLSSLVRLDSRFNSISGNIPSKIGNLTKLV---HLNFADN-NLRGEIPNEIGNLKNLA-DLVLALNNLIGPIPTTIFNI 158 (870)
Q Consensus 84 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~l 158 (870)
.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++. +|...+..
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~~~~~~~ 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNG 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-ECTTTTTT
T ss_pred CCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cCHhhcCC
Confidence 999999999999999994 776 88888888 9999999 99977778899999999 99999999984 45444444
Q ss_pred ccceEEEeeccc-ccccCCCcccCCC-CccceeeecccccccccCCcccCCCCccEEEccCC
Q 002892 159 STIIIINLVGNQ-LSGHRPSTMGHSL-PNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSN 218 (870)
Q Consensus 159 ~~L~~L~l~~N~-l~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 218 (870)
++|+.|++++|+ +++..+..+. .+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~-~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFG-GVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTT-TCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhh-ccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 899999999995 8866555554 56 9999999999999954 443 6778999999876
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.3e-22 Score=219.95 Aligned_cols=249 Identities=18% Similarity=0.104 Sum_probs=194.2
Q ss_pred CCCCCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCC-CCCCC
Q 002892 8 PPHIGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPN-SLFNL 86 (870)
Q Consensus 8 p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l 86 (870)
|+.++.... +.++.++++++ .+|..+ .+++++|+|++|+|+...+..|..+++|++|+|++|+|.+.+|. .|.++
T Consensus 3 p~~~C~C~~-~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L 78 (350)
T 4ay9_X 3 HHRICHCSN-RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL 78 (350)
T ss_dssp CCSSSEEET-TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSC
T ss_pred CCCccEeeC-CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcc
Confidence 555555543 67899999998 678766 46899999999999955556799999999999999998765554 67889
Q ss_pred CCCcE-EeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccc-ccccccccccccccc-cceE
Q 002892 87 SSLVR-LDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLAL-NNLIGPIPTTIFNIS-TIII 163 (870)
Q Consensus 87 ~~L~~-L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~-~L~~ 163 (870)
++|.+ +.+++|+++...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+..|..+. .++.
T Consensus 79 ~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~ 158 (350)
T 4ay9_X 79 PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVI 158 (350)
T ss_dssp TTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEE
T ss_pred hhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhh
Confidence 88775 66778999977788899999999999999999976666777778888888865 567666666777765 6888
Q ss_pred EEeecccccccCCCcccCCCCccceeeecc-cccccccCCcccCCCCccEEEccCCcccCCCcccccccccccccccccc
Q 002892 164 INLVGNQLSGHRPSTMGHSLPNRQFLLLWA-NRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRAN 242 (870)
Q Consensus 164 L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N 242 (870)
|+|++|+|+...+..+. ..+|+.|++++ |.++.+.++.|..+++|++|||++|+|+.+.+..|.++++|+.+++.
T Consensus 159 L~L~~N~i~~i~~~~f~--~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~-- 234 (350)
T 4ay9_X 159 LWLNKNGIQEIHNSAFN--GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY-- 234 (350)
T ss_dssp EECCSSCCCEECTTSST--TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--
T ss_pred hccccccccCCChhhcc--ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--
Confidence 99999999865555443 56888999874 77776556678999999999999999997766778888888777653
Q ss_pred ccccccCCCCCcccccccccccccceEEcCCC
Q 002892 243 YLTTETSSNGEWSFLSSLTNCNKLRALSLGSN 274 (870)
Q Consensus 243 ~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N 274 (870)
.++.+ +.+..+++|+.++++++
T Consensus 235 ~l~~l----------P~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 235 NLKKL----------PTLEKLVALMEASLTYP 256 (350)
T ss_dssp TCCCC----------CCTTTCCSCCEEECSCH
T ss_pred CcCcC----------CCchhCcChhhCcCCCC
Confidence 34443 25677888888888754
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=3.4e-23 Score=219.97 Aligned_cols=212 Identities=19% Similarity=0.302 Sum_probs=137.3
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
+..+.+..+.+++.+ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ ++. +.++++|++|+|++
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccC
Confidence 344455556655332 2455667777777777776 344 46667777777777777764 333 77777777777777
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCC
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRP 176 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 176 (870)
|++++ + ..+..+++|++|++++|++++ ++ .+..+++|++|++++|++++..+ +..+++|++|++++|++++..+
T Consensus 95 n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 168 (308)
T 1h6u_A 95 NPLKN-V-SAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP 168 (308)
T ss_dssp CCCSC-C-GGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG
T ss_pred CcCCC-c-hhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh
Confidence 77763 3 256677777777777777774 33 26777777777777777765433 6666777777777777765433
Q ss_pred CcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccc
Q 002892 177 STMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTE 247 (870)
Q Consensus 177 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 247 (870)
...+++|+.|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.++..
T Consensus 169 ---l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 169 ---LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp ---GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred ---hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 3346666666666666664433 667777777777777777543 267777777777777777653
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.4e-23 Score=220.60 Aligned_cols=225 Identities=20% Similarity=0.157 Sum_probs=186.6
Q ss_pred CCCeecCCCCccccCCCc---cccCCCCCcEEEccCCcccccCCccc--cCCCCCCEEEcCCCccccCCC----CCCCCC
Q 002892 16 FLMYLDISENNFRGYLPN---ELGQLRRLKFLGFAYNDLTGSFPSWI--GVFSKLQVLSLRNNSFTGPIP----NSLFNL 86 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~---~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~n~i~~~~~----~~~~~l 86 (870)
.++.|+++++.++...-. .+..+++|++|++++|.+++..|..+ +.+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467888888877532111 12345679999999999999999888 999999999999999997555 345679
Q ss_pred CCCcEEeccCCccccccCcCCCCcCCccEEEeecCcccee--c--CCcccCCCCCCeeecccccccccccc----ccccc
Q 002892 87 SSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGE--I--PNEIGNLKNLADLVLALNNLIGPIPT----TIFNI 158 (870)
Q Consensus 87 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~--~--~~~l~~l~~L~~L~L~~n~l~~~~~~----~~~~l 158 (870)
++|++|+|++|++.+..+..|+.+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988888999999999999999998642 2 3345789999999999999973 222 35688
Q ss_pred ccceEEEeecccccccCCCcccCC--CCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccccc
Q 002892 159 STIIIINLVGNQLSGHRPSTMGHS--LPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLST 236 (870)
Q Consensus 159 ~~L~~L~l~~N~l~~~~~~~~~~~--l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~ 236 (870)
++|++|+|++|++++..|..+... +++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 999999999999998877766543 389999999999999 6677775 7999999999999964 43 788999999
Q ss_pred cccccccccc
Q 002892 237 LNIRANYLTT 246 (870)
Q Consensus 237 L~L~~N~l~~ 246 (870)
|+|++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999875
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=2.6e-24 Score=232.54 Aligned_cols=256 Identities=18% Similarity=0.233 Sum_probs=120.3
Q ss_pred CCeecCCCCccccCCCccccCC--CCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccC-CCCCCCCCCCCcEEe
Q 002892 17 LMYLDISENNFRGYLPNELGQL--RRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGP-IPNSLFNLSSLVRLD 93 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~ 93 (870)
++.||+++|++. |..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 445555555443 2334444 4555555555555433332 33445555555555554432 334444455555555
Q ss_pred ccCCccccccCcCCCCcCCccEEEeecC-cccee-cCCcccCCCCCCeeecccc-ccccc-ccccccccc-cceEEEeec
Q 002892 94 SRFNSISGNIPSKIGNLTKLVHLNFADN-NLRGE-IPNEIGNLKNLADLVLALN-NLIGP-IPTTIFNIS-TIIIINLVG 168 (870)
Q Consensus 94 L~~n~i~~~~~~~~~~l~~L~~L~l~~N-~l~~~-~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~l~~ 168 (870)
|++|.+++..+..++.+++|++|++++| .+++. ++..+.++++|++|++++| ++++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 5555544444444444555555555555 34421 3333444445555555555 44432 333444444 444444444
Q ss_pred ccccccCCCcccCCCCccceeeecccccc-cccCCcccCCCCccEEEccCCc-ccCCCccccccccccccccccccc-cc
Q 002892 169 NQLSGHRPSTMGHSLPNRQFLLLWANRLT-GTIPNSITNASKLIGLDLNSNS-LSGQIPNTFGNLRHLSTLNIRANY-LT 245 (870)
Q Consensus 169 N~l~~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~-i~~~~~~~~~~l~~L~~L~L~~N~-l~ 245 (870)
|.+ .++ +.++..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.
T Consensus 205 ~~~-----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~ 261 (336)
T 2ast_B 205 YRK-----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDII 261 (336)
T ss_dssp CGG-----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCC
T ss_pred Ccc-----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCC
Confidence 421 222 2234444555555555555555 444445555555555555555553 11
Q ss_pred cccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhC
Q 002892 246 TETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGN 311 (870)
Q Consensus 246 ~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~ 311 (870)
. ..+..+..+++|+.|++++| +....+..+...+..|.++.|++++..|..+++
T Consensus 262 ~--------~~~~~l~~~~~L~~L~l~~~----i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 262 P--------ETLLELGEIPTLKTLQVFGI----VPDGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp G--------GGGGGGGGCTTCCEEECTTS----SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred H--------HHHHHHhcCCCCCEEeccCc----cCHHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 1 01123445555666666555 222233333344555555666666555555443
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.1e-22 Score=213.74 Aligned_cols=196 Identities=21% Similarity=0.299 Sum_probs=172.6
Q ss_pred CCCCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCc
Q 002892 11 IGNLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLV 90 (870)
Q Consensus 11 ~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 90 (870)
+.++++|++|++++|+++. +| .+..+++|++|++++|.+++ ++. +..+++|++|+|++|++++ ++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 4568899999999999984 55 69999999999999999994 555 9999999999999999984 44 799999999
Q ss_pred EEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccc
Q 002892 91 RLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQ 170 (870)
Q Consensus 91 ~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (870)
+|+|++|++++ ++. +..+++|++|++++|++++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|+
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 99999999985 443 9999999999999999995444 8999999999999999986544 8899999999999999
Q ss_pred ccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCC
Q 002892 171 LSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQ 223 (870)
Q Consensus 171 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 223 (870)
+++..+ ...+++|+.|+|++|++++.. .+..+++|++|++++|++++.
T Consensus 185 l~~~~~---l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISDISP---LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCCGG---GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECC
T ss_pred cCcChh---hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecC
Confidence 987665 356899999999999999765 389999999999999999853
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=5e-22 Score=215.26 Aligned_cols=204 Identities=17% Similarity=0.128 Sum_probs=163.6
Q ss_pred cEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccC-cCCCCcCCccE-EEee
Q 002892 42 KFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIP-SKIGNLTKLVH-LNFA 119 (870)
Q Consensus 42 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~-L~l~ 119 (870)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57889999999 788766 4689999999999995555679999999999999999876665 46888988775 6677
Q ss_pred cCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeec-ccccccCCCcccCCCCccceeeeccccccc
Q 002892 120 DNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVG-NQLSGHRPSTMGHSLPNRQFLLLWANRLTG 198 (870)
Q Consensus 120 ~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 198 (870)
+|+|+...|..|..+++|++|++++|++....+..+....++..|++.+ |++....+..+......++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988888999999999999999999888777888888899999976 567665555555545578888999999885
Q ss_pred ccCCcccCCCCccEEEccC-CcccCCCccccccccccccccccccccccccC
Q 002892 199 TIPNSITNASKLIGLDLNS-NSLSGQIPNTFGNLRHLSTLNIRANYLTTETS 249 (870)
Q Consensus 199 ~~~~~~~~l~~L~~L~Ls~-N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 249 (870)
+ +.......+|++|++++ |.++.+.+++|.++++|++|+|++|+|+.++.
T Consensus 169 i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 169 I-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp E-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred C-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 4 44444566788888874 67776666778888888888888888887653
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.6e-24 Score=228.92 Aligned_cols=252 Identities=17% Similarity=0.234 Sum_probs=182.6
Q ss_pred CCcEEEccCCcccccCCccccCC--CCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccc-cCcCCCCcCCccEE
Q 002892 40 RLKFLGFAYNDLTGSFPSWIGVF--SKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGN-IPSKIGNLTKLVHL 116 (870)
Q Consensus 40 ~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L 116 (870)
.++.+++++|.+. +..+..+ ++++.|++++|.+.+..+ .+..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4778888888776 4556666 778888888888875444 456778888888888887754 66667777888888
Q ss_pred EeecCccceecCCcccCCCCCCeeecccc-cccc-cccccccccccceEEEeecc-cccccCCCcccCCCCccceeeecc
Q 002892 117 NFADNNLRGEIPNEIGNLKNLADLVLALN-NLIG-PIPTTIFNISTIIIINLVGN-QLSGHRPSTMGHSLPNRQFLLLWA 193 (870)
Q Consensus 117 ~l~~N~l~~~~~~~l~~l~~L~~L~L~~n-~l~~-~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~~l~~L~~L~L~~ 193 (870)
++++|.+++..+..++.+++|++|++++| .+++ .++..+.++++|++|++++| .++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~--------------------- 182 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT--------------------- 182 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC---------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC---------------------
Confidence 88888777666777777778888888777 5554 24555666666666666666 554
Q ss_pred cccccc-cCCcccCCC-CccEEEccCCc--cc-CCCccccccccccccccccccc-cccccCCCCCcccccccccccccc
Q 002892 194 NRLTGT-IPNSITNAS-KLIGLDLNSNS--LS-GQIPNTFGNLRHLSTLNIRANY-LTTETSSNGEWSFLSSLTNCNKLR 267 (870)
Q Consensus 194 n~l~~~-~~~~~~~l~-~L~~L~Ls~N~--i~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~l~~l~~L~ 267 (870)
+. ++..+..++ +|++|++++|. ++ +.++..+..+++|+.|++++|. ++.. .+..+..+++|+
T Consensus 183 ----~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~--------~~~~l~~l~~L~ 250 (336)
T 2ast_B 183 ----EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKND--------CFQEFFQLNYLQ 250 (336)
T ss_dssp ----HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGG--------GGGGGGGCTTCC
T ss_pred ----hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHH--------HHHHHhCCCCCC
Confidence 22 455677788 99999999994 54 3557778899999999999999 5542 245788899999
Q ss_pred eEEcCCCCCCCCCCc---cccccccchhhhhcccccccccCchhhhCc-cCCcEEEeeCCCccccCCchhhc
Q 002892 268 ALSLGSNPLDSILPP---LIGNFSASFQQFYAHECKLKGSIPKEIGNL-RGLIALSLFTNDLNGTIPTTLGR 335 (870)
Q Consensus 268 ~L~L~~N~l~~~~~~---~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~ 335 (870)
+|++++|. .+.+. .+.. ...|+.|++++| ++. ..+..+ ..|..|++++|++++..|..++.
T Consensus 251 ~L~l~~~~--~~~~~~~~~l~~-~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 251 HLSLSRCY--DIIPETLLELGE-IPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp EEECTTCT--TCCGGGGGGGGG-CTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred EeeCCCCC--CCCHHHHHHHhc-CCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 99999996 33333 3444 358999999998 432 234444 34777789999999999987764
No 348
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.5e-21 Score=201.03 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=107.1
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
...+++++++++++ .+|..+. ++++.|+|++|.+++..+..++.+++|++|+|++|+|++..+..+.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 34566777777776 4555443 46666777777666555666666666666666666666555555666666666666
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|++++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|++|+|++|++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l--- 167 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL--- 167 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC---
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcC---
Confidence 66666654455566666666666666666644444455566666666666655544443444444444444444433
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccC
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSG 222 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~ 222 (870)
++..+..+..+++|++|+|++|++..
T Consensus 168 ----------------------~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 168 ----------------------QSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp ----------------------SCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred ----------------------CccCHHHHhCCCCCCEEEeeCCceeC
Confidence 33444455666666666666666653
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.1e-21 Score=191.59 Aligned_cols=181 Identities=20% Similarity=0.233 Sum_probs=146.8
Q ss_pred CeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCC
Q 002892 18 MYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFN 97 (870)
Q Consensus 18 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 97 (870)
+.+++++++++ .+|..+ .++|++|++++|++++..+..++.+++|++|+|++|++++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 67888888888 466544 468999999999998666677888999999999999998655556788999999999999
Q ss_pred ccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCC
Q 002892 98 SISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPS 177 (870)
Q Consensus 98 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 177 (870)
++++..+..|..+++|++|++++|+|++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9986666668889999999999999997777778889999999999999987777778888888888888887763
Q ss_pred cccCCCCccceeeecccccccccCCcccCCCC
Q 002892 178 TMGHSLPNRQFLLLWANRLTGTIPNSITNASK 209 (870)
Q Consensus 178 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 209 (870)
.+++|++|+++.|++++.+|..++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3456777777777777777776665544
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=3.9e-22 Score=207.97 Aligned_cols=148 Identities=15% Similarity=0.101 Sum_probs=118.4
Q ss_pred HhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhh------------------HHHHHHHHHHHHHHhcCCCce
Q 002892 582 QATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLE------------------RAFRSFESECEVLRNVRHRNL 643 (870)
Q Consensus 582 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~ni 643 (870)
.....|.+.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|++++++++|
T Consensus 87 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--- 163 (282)
T 1zar_A 87 RSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--- 163 (282)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---
T ss_pred hCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---
Confidence 33456667799999999999999987799999999965321 235678899999999984
Q ss_pred eEEeeeeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCc
Q 002892 644 IKIFSSCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMT 723 (870)
Q Consensus 644 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~ 723 (870)
+++.+++.. +..++||||++|++|.+ +.. .....++.|++.|++||| ++||+||||||+||+++ ++.
T Consensus 164 ~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~ 230 (282)
T 1zar_A 164 LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEG 230 (282)
T ss_dssp SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTE
T ss_pred CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCc
Confidence 555554433 55699999999999988 422 124469999999999999 66799999999999999 999
Q ss_pred eEEeccccccccCCCCCcccccccccccccCCccccc
Q 002892 724 ARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYAS 760 (870)
Q Consensus 724 ~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 760 (870)
+||+|||+|.. +..|.|||++.
T Consensus 231 vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 231 IWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp EEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred EEEEECCCCeE---------------CCCCCHHHHHH
Confidence 99999999873 34478888774
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.85 E-value=1.3e-21 Score=196.47 Aligned_cols=159 Identities=24% Similarity=0.297 Sum_probs=138.2
Q ss_pred ccceeecCCcccCCCCC-cccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEc
Q 002892 361 SLRQLHLGSNQLTSSIP-SSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSL 439 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 439 (870)
.+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 56899999999998755 56899999999999999999888889999999999999999999988889999999999999
Q ss_pred CCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccccc-cccccccccC
Q 002892 440 ARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLAQ-SFLWNYALCG 518 (870)
Q Consensus 440 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~-~~~~n~~~c~ 518 (870)
++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+|.++.. .+..|... ....+...|+
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~l~~~~~~~~~~~~~~~C~ 191 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLA-WLGEWLRKKRIVTGNPRCQ 191 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGH-HHHHHHHHSCCBCCCCEEE
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchH-HHHHHHHhcCccccCCccC
Confidence 999999999999999999999999999999888999999999999999999999998853 23343322 1222233566
Q ss_pred CC
Q 002892 519 PP 520 (870)
Q Consensus 519 ~~ 520 (870)
.|
T Consensus 192 ~P 193 (220)
T 2v70_A 192 KP 193 (220)
T ss_dssp ES
T ss_pred CC
Confidence 55
No 352
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.85 E-value=1.9e-21 Score=195.25 Aligned_cols=139 Identities=25% Similarity=0.320 Sum_probs=132.1
Q ss_pred cccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEc
Q 002892 360 ISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSL 439 (870)
Q Consensus 360 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 439 (870)
++|+.|+|++|+|+++.+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999999877778999999999999
Q ss_pred CCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 440 ARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 440 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
++|.|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+..
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 99999999999999999999999999999988888899999999999999999998874
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.4e-20 Score=214.12 Aligned_cols=134 Identities=25% Similarity=0.337 Sum_probs=70.3
Q ss_pred CCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 16 FLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 16 ~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
+|+.|+|++|++++ +|..+ +++|++|+|++|+++ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 55556666665553 44433 245556666666555 444 334555555555555553 444 443 55555555
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccc
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLS 172 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 172 (870)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|+|+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 555553 443 34555555555555553 333 34555555555555554 333 33 45555555555554
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=2.3e-20 Score=188.84 Aligned_cols=146 Identities=27% Similarity=0.270 Sum_probs=134.1
Q ss_pred cccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEc
Q 002892 360 ISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSL 439 (870)
Q Consensus 360 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 439 (870)
++|++|+|++|+|++..|..|..+++|+.|+|++|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 68999999999999999999999999999999999999777778899999999999999999888888999999999999
Q ss_pred CCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccc
Q 002892 440 ARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 440 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+|.++....+..|.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~l~~~~ 185 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRDIMYLRNWV 185 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGGGHHHHHHH
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcchhHHHHHHH
Confidence 999998 678899999999999999999997777889999999999999999999998544455443
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.2e-20 Score=198.25 Aligned_cols=190 Identities=22% Similarity=0.239 Sum_probs=117.3
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
..+..+.+..+.+++.. .+..+++|+.|++++|.++ .++. +..+++|++|+|++|++++. +. +.++++|++|+|
T Consensus 24 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l 97 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEEC
Confidence 34455566667666432 3456777888888888777 4443 77778888888888888743 33 777788888888
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|++++ ++ .+..+++|++|++++|++++ + ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++.
T Consensus 98 ~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 98 DENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp CSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 8887763 33 37777778888888877774 2 3567777777777777777653 4566666666666666666543
Q ss_pred CCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCccc
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLS 221 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 221 (870)
.+ ...+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 172 ~~---l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 172 VP---LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GG---GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred hh---hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 33 22234444444444444421 1 2344444444444444443
No 356
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=6.9e-20 Score=182.67 Aligned_cols=181 Identities=22% Similarity=0.185 Sum_probs=137.6
Q ss_pred cEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecC
Q 002892 42 KFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADN 121 (870)
Q Consensus 42 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N 121 (870)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..+.++++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 57788888888 566554 468999999999998666666888999999999999998665666788999999999999
Q ss_pred ccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccC
Q 002892 122 NLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIP 201 (870)
Q Consensus 122 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 201 (870)
++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|++++..+.. +..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGV-FDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT-TTTCTTCCEEECCSCCBCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHH-hccCCCccEEEecCCCeec---
Confidence 998666667888899999999999888777777788888888888888887544433 3346677777777776552
Q ss_pred CcccCCCCccEEEccCCcccCCCccccccccc
Q 002892 202 NSITNASKLIGLDLNSNSLSGQIPNTFGNLRH 233 (870)
Q Consensus 202 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 233 (870)
.+++|++|+++.|++++.+|.+++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3445667777777777767766665543
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=1.6e-20 Score=204.21 Aligned_cols=181 Identities=23% Similarity=0.206 Sum_probs=150.6
Q ss_pred hhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCccccc-CccccceeecCCc
Q 002892 292 QQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLS-SLISLRQLHLGSN 370 (870)
Q Consensus 292 ~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~-~l~~L~~L~Ls~N 370 (870)
+.+++++++++. +|..+. +.++.|+|++|++++..+ ..+. .+++|++|+|++|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~-----------------------~~~~~~l~~L~~L~L~~N 74 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRA-----------------------EWTPTRLTNLHSLLLSHN 74 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECT-----------------------TSSSSCCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccCh-----------------------hhhhhcccccCEEECCCC
Confidence 456666666663 454443 346677777777764333 3454 7789999999999
Q ss_pred ccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccc
Q 002892 371 QLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPD 450 (870)
Q Consensus 371 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 450 (870)
+|+++.+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+.
T Consensus 75 ~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 75 HLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred cCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 99988889999999999999999999987788899999999999999999988899999999999999999999986666
Q ss_pred cc---cCCCCCCeEecCCCcccCCCCcchhhccc--cceeeccCCcccccCCC
Q 002892 451 SF---GSLTSLEYLDLSNNNLSGEIPKSFEILSH--LKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 451 ~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~~p~ 498 (870)
.| ..+++|+.|+|++|+|++..+..|..++. |+.|+|++|+|.|.+..
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 66 67999999999999999776678888887 48999999999998864
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=8.2e-20 Score=191.99 Aligned_cols=128 Identities=28% Similarity=0.366 Sum_probs=77.5
Q ss_pred cCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCE
Q 002892 357 SSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLIT 436 (870)
Q Consensus 357 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 436 (870)
..+++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++. ..++.+++|+.
T Consensus 87 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 160 (291)
T 1h6t_A 87 ANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDT 160 (291)
T ss_dssp TTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred ccCCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCE
Confidence 3445566666666666532 2255666666666666666642 3456666666666666666643 45666666666
Q ss_pred EEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccc
Q 002892 437 LSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 437 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
|++++|.+++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 161 L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 161 LSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp EECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred EEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 6666666665443 6666666666666666663 33 36666666677777666654
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.8e-19 Score=204.91 Aligned_cols=183 Identities=23% Similarity=0.313 Sum_probs=100.0
Q ss_pred CCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecc
Q 002892 64 KLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLA 143 (870)
Q Consensus 64 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~ 143 (870)
+|+.|+|++|.|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 45555555555543 444332 44555555555554 344 224455555555555553 333 333 55555555
Q ss_pred cccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCC
Q 002892 144 LNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQ 223 (870)
Q Consensus 144 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 223 (870)
+|++++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|++|+|++|+|+ .
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~ 194 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-S 194 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-S
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-c
Confidence 555554 333 34555555555555554 222 24566666666666664 444 44 66777777777776 3
Q ss_pred Ccccccccccc-------ccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcc
Q 002892 224 IPNTFGNLRHL-------STLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPL 283 (870)
Q Consensus 224 ~~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 283 (870)
+|. |.. +| +.|+|++|.|+.++ ..+..+++|+.|+|++|++.+..|..
T Consensus 195 lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp---------~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 195 LPA-VPV--RNHHSEETEIFFRCRENRITHIP---------ENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp CCC-CC----------CCEEEECCSSCCCCCC---------GGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred hhh-HHH--hhhcccccceEEecCCCcceecC---------HHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 444 443 55 77777777777543 34555777888888888877764443
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=4.2e-20 Score=212.78 Aligned_cols=200 Identities=23% Similarity=0.242 Sum_probs=135.2
Q ss_pred CCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 14 LSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 14 l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
+..+..++++.+.+.+..+ +..+++|+.|++++|.++ .++ .++.+++|+.|+|++|+|++..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3456667777777775433 567788888888888887 444 47778888888888888875433 77888888888
Q ss_pred ccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccc
Q 002892 94 SRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSG 173 (870)
Q Consensus 94 L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 173 (870)
|++|.+++ +| .+..+++|++|+|++|+|++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88888873 33 67788888888888888874 3 3577778888888888877754 566677777777777777765
Q ss_pred cCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccc
Q 002892 174 HRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGN 230 (870)
Q Consensus 174 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 230 (870)
..| ...+++|+.|+|++|+|++. ..+..+++|+.|+|++|++.+.....+..
T Consensus 168 ~~~---l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 168 IVP---LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp CGG---GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred chh---hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 544 23455666666666666542 24555666666666666665433333333
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.1e-19 Score=179.11 Aligned_cols=152 Identities=22% Similarity=0.200 Sum_probs=126.5
Q ss_pred CeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCC
Q 002892 18 MYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFN 97 (870)
Q Consensus 18 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 97 (870)
+.+++++++++ .+|..+. ++|+.|++++|.+++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 67888888888 5776554 68889999999888777778888889999999999888777888888888999999999
Q ss_pred ccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccc
Q 002892 98 SISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLS 172 (870)
Q Consensus 98 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 172 (870)
+|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 888555556788888888888888888777888888888888888888888777777888888888888888775
No 362
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=1.2e-19 Score=177.94 Aligned_cols=155 Identities=28% Similarity=0.356 Sum_probs=131.0
Q ss_pred cceeecCCcccCCCCCcccccccccceEecCCCccCCCCcc-cccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 362 LRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPS-DIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 362 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
-+.+++++|+++ .+|..+.. +|++|++++|.+++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 378999999997 55655543 899999999999976654 48999999999999999999889999999999999999
Q ss_pred CCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCccccccc-ccccccccccCC
Q 002892 441 RNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLA-QSFLWNYALCGP 519 (870)
Q Consensus 441 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~-~~~~~n~~~c~~ 519 (870)
+|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+|.++.. .+..|.. ..+.++...|+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHHHHHHHcCCCCCCCCCCC
Confidence 99999988888999999999999999999989999999999999999999999998742 3333322 234556667876
Q ss_pred C
Q 002892 520 P 520 (870)
Q Consensus 520 ~ 520 (870)
|
T Consensus 166 P 166 (192)
T 1w8a_A 166 P 166 (192)
T ss_dssp S
T ss_pred C
Confidence 6
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.9e-19 Score=178.40 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=130.4
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCC-ccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEecc
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFP-SWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSR 95 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 95 (870)
-+.+++++|+++ .+|..+. ..+++|+|++|++++..+ ..|+.+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 358999999998 4776553 456899999999986644 457889999999999999987777789999999999999
Q ss_pred CCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 96 FNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 96 ~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
+|++++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+.+.
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999877777788899999999999999987788889999999999999999888888888888888888888888743
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=3.6e-19 Score=193.61 Aligned_cols=175 Identities=21% Similarity=0.182 Sum_probs=92.6
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCC-CCCCCcEEeccCCccccccCcCCCCcCCccEEEeecC
Q 002892 43 FLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLF-NLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADN 121 (870)
Q Consensus 43 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N 121 (870)
.++++++.++ .+|..+. ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4555555555 3444332 2345555555555544444444 5555555555555555444445555555555555555
Q ss_pred ccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccC
Q 002892 122 NLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIP 201 (870)
Q Consensus 122 ~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 201 (870)
+|++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|+|++. .+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l-------------------------~~ 153 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF-------------------------PV 153 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSC-------------------------CG
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCee-------------------------CH
Confidence 55544444555555555555555555544444455555555555555544421 11
Q ss_pred Ccc---cCCCCccEEEccCCcccCCCccccccccc--cccccccccccc
Q 002892 202 NSI---TNASKLIGLDLNSNSLSGQIPNTFGNLRH--LSTLNIRANYLT 245 (870)
Q Consensus 202 ~~~---~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~--L~~L~L~~N~l~ 245 (870)
..| ..+++|++|||++|+|+...+..|..++. |+.|+|++|.+.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 122 45667777777777777655566666665 366666666665
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=4.9e-21 Score=219.24 Aligned_cols=165 Identities=25% Similarity=0.285 Sum_probs=99.9
Q ss_pred cccCchhhhCccCCcEEE-eeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCccc
Q 002892 302 KGSIPKEIGNLRGLIALS-LFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSF 380 (870)
Q Consensus 302 ~~~~~~~l~~l~~L~~L~-L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 380 (870)
.+..|..+..+++|+.|+ ++.|.+ ..|..+.+.+|....+|. ..|+.|+|++|+|++ +|. |
T Consensus 398 ~~~~~~~l~~l~~L~~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~-~ 459 (567)
T 1dce_A 398 LLYEKETLQYFSTLKAVDPMRAAYL-----------DDLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH-L 459 (567)
T ss_dssp GGGHHHHHHHHHHHHHHCGGGHHHH-----------HHHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC-G
T ss_pred ccCCHHHHHHHHhcccCcchhhccc-----------chhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC-c
Confidence 345566666666666665 444332 344444444322222221 136677777777764 344 6
Q ss_pred ccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcc-cccccCCCCCC
Q 002892 381 WSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSI-PDSFGSLTSLE 459 (870)
Q Consensus 381 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~ 459 (870)
..+++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.. |..|+.+++|+
T Consensus 460 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~ 536 (567)
T 1dce_A 460 EQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV 536 (567)
T ss_dssp GGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC
T ss_pred cccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCC
Confidence 67777777777777776 566677777777777777777765 44 6667777777777777776655 66677777777
Q ss_pred eEecCCCcccCCCCcc---hhhccccceeec
Q 002892 460 YLDLSNNNLSGEIPKS---FEILSHLKRLNV 487 (870)
Q Consensus 460 ~L~L~~N~l~~~~p~~---~~~l~~L~~L~l 487 (870)
.|+|++|+|++..|.. +..+++|+.|++
T Consensus 537 ~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 537 LLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp EEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 7777777776544322 233566666653
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.8e-19 Score=207.40 Aligned_cols=200 Identities=23% Similarity=0.313 Sum_probs=136.1
Q ss_pred CCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 208 SKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 208 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
..+..+.++.+.+.+.. .+..+++|+.|++++|.+..++ .+..+++|+.|+|++|+|.++
T Consensus 21 ~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l~----------~l~~l~~L~~L~Ls~N~l~~~-------- 80 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQ----------GIQYLPNVTKLFLNGNKLTDI-------- 80 (605)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCCT----------TGGGCTTCCEEECTTSCCCCC--------
T ss_pred HHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCCCCh----------HHccCCCCCEEEeeCCCCCCC--------
Confidence 44566677777776433 3567788888888888777532 466777788888877777643
Q ss_pred ccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeec
Q 002892 288 SASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHL 367 (870)
Q Consensus 288 ~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~L 367 (870)
+. +..+++|+.|+|++|++.+ + ..+..+++|++|+|
T Consensus 81 ------------------~~-l~~l~~L~~L~Ls~N~l~~-l------------------------~~l~~l~~L~~L~L 116 (605)
T 1m9s_A 81 ------------------KP-LTNLKNLGWLFLDENKIKD-L------------------------SSLKDLKKLKSLSL 116 (605)
T ss_dssp ------------------GG-GGGCTTCCEEECCSSCCCC-C------------------------TTSTTCTTCCEEEC
T ss_pred ------------------hh-hccCCCCCEEECcCCCCCC-C------------------------hhhccCCCCCEEEe
Confidence 11 5667777778877777763 1 13556677777888
Q ss_pred CCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCc
Q 002892 368 GSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDS 447 (870)
Q Consensus 368 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 447 (870)
++|+|.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++.
T Consensus 117 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 117 EHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp TTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 88877753 3577777777777777777754 567777777777777777776555 77777777777777777753
Q ss_pred ccccccCCCCCCeEecCCCcccCCCCcchhhc
Q 002892 448 IPDSFGSLTSLEYLDLSNNNLSGEIPKSFEIL 479 (870)
Q Consensus 448 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 479 (870)
..+..+++|+.|+|++|++++.....+..+
T Consensus 191 --~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l 220 (605)
T 1m9s_A 191 --RALAGLKNLDVLELFSQECLNKPINHQSNL 220 (605)
T ss_dssp --GGGTTCTTCSEEECCSEEEECCCCCCCSSC
T ss_pred --hHHccCCCCCEEEccCCcCcCCcccccccE
Confidence 347777777777777777775433333333
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.6e-18 Score=175.30 Aligned_cols=153 Identities=22% Similarity=0.210 Sum_probs=122.4
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
-+.+++++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 567888888887 5676553 7888888888888877788888888888888888888755555678888888888888
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccc
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSG 173 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 173 (870)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 8888666666788888888888888888 677788888888888888888887666777778888888888887764
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=8.5e-21 Score=217.30 Aligned_cols=175 Identities=22% Similarity=0.206 Sum_probs=135.7
Q ss_pred cCchhhhCccCCcEEEeeCCC-------------ccccCCchhhchhhHHHHH-hcCCCCCCCcccccCccccceeecCC
Q 002892 304 SIPKEIGNLRGLIALSLFTND-------------LNGTIPTTLGRLQQLQALL-QRNNLNGPIPTCLSSLISLRQLHLGS 369 (870)
Q Consensus 304 ~~~~~l~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-l~n~~~~~~p~~~~~l~~L~~L~Ls~ 369 (870)
.+|..++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.+ .+.+|+.+.+++
T Consensus 363 ~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n----------~~~~L~~l~l~~ 432 (567)
T 1dce_A 363 VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA----------YLDDLRSKFLLE 432 (567)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH----------HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc----------ccchhhhhhhhc
Confidence 445666666666666664443 3344455555555555554 3321 123455555666
Q ss_pred cccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCccc
Q 002892 370 NQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIP 449 (870)
Q Consensus 370 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 449 (870)
|.++...+ ..|+.|+|++|.|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|.|++ +|
T Consensus 433 n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 433 NSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred ccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 66653322 258999999999996 676 999999999999999999 789999999999999999999997 67
Q ss_pred ccccCCCCCCeEecCCCcccCCC-CcchhhccccceeeccCCcccccCCCC
Q 002892 450 DSFGSLTSLEYLDLSNNNLSGEI-PKSFEILSHLKRLNVSHNRLEGKIPTN 499 (870)
Q Consensus 450 ~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~~ 499 (870)
.|+.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|..
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 8999999999999999999877 999999999999999999999988754
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=8e-19 Score=173.11 Aligned_cols=154 Identities=19% Similarity=0.248 Sum_probs=75.7
Q ss_pred cCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccE
Q 002892 36 GQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVH 115 (870)
Q Consensus 36 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 115 (870)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34445555555555555 334 3455555555555555443 1224555555555555555555444555555555555
Q ss_pred EEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCccceeeecccc
Q 002892 116 LNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANR 195 (870)
Q Consensus 116 L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~ 195 (870)
|++++|++++..+..++.+++|++|++++|+..+.++ .+..+++|++|++++|++++.. . ...+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~--~-l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR--G-IEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT--T-GGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH--H-hccCCCCCEEEeeCcc
Confidence 5555555554444455555555555555554222233 3555555555555555554322 1 1234555566666655
Q ss_pred cc
Q 002892 196 LT 197 (870)
Q Consensus 196 l~ 197 (870)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=3.6e-19 Score=183.91 Aligned_cols=169 Identities=19% Similarity=0.233 Sum_probs=125.1
Q ss_pred CCCCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEE
Q 002892 13 NLSFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRL 92 (870)
Q Consensus 13 ~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 92 (870)
++.++..+++++|.+++ ++ .+..+++|+.|++++|.++ .++ .++.+++|++|+|++|+|++. +. +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEE
Confidence 56778888899999884 44 5788899999999999888 566 688889999999999999854 44 8888999999
Q ss_pred eccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccc
Q 002892 93 DSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLS 172 (870)
Q Consensus 93 ~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 172 (870)
+|++|++++ +|.. .. ++|++|++++|+|++ ++ .+..+++|+.|++++|++++. + .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 999999884 4443 33 888889999988885 33 588888888888888888754 3 5777777777777777776
Q ss_pred ccCCCcccCCCCccceeeecccccc
Q 002892 173 GHRPSTMGHSLPNRQFLLLWANRLT 197 (870)
Q Consensus 173 ~~~~~~~~~~l~~L~~L~L~~n~l~ 197 (870)
+. .....+++|+.|++++|.++
T Consensus 164 ~~---~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT---GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC---TTSTTCCCCCEEEEEEEEEE
T ss_pred ch---HHhccCCCCCEEeCCCCccc
Confidence 44 11223444555555555544
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2e-18 Score=170.21 Aligned_cols=155 Identities=15% Similarity=0.267 Sum_probs=129.7
Q ss_pred hhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccce
Q 002892 309 IGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILR 388 (870)
Q Consensus 309 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 388 (870)
...+++|+.|++++|.+.. +| .+..+++|++|++++|.++. +..+..+++|++
T Consensus 40 ~~~l~~L~~L~l~~n~i~~-l~------------------------~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~ 92 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVTD-LT------------------------GIEYAHNIKDLTINNIHATN--YNPISGLSNLER 92 (197)
T ss_dssp HHHHHTCCEEEEESSCCSC-CT------------------------TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCE
T ss_pred hhhcCCccEEeccCCCccC-hH------------------------HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCE
Confidence 4677889999999998872 22 24556789999999997763 347888999999
Q ss_pred EecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCc-ccCcccccccCCCCCCeEecCCCc
Q 002892 389 IDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNR-FQDSIPDSFGSLTSLEYLDLSNNN 467 (870)
Q Consensus 389 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~ 467 (870)
|++++|.+++..|..|+.+++|++|+|++|++++..|..++.+++|+.|++++|. ++. +| .+..+++|+.|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCC
Confidence 9999999998788899999999999999999998888899999999999999998 664 55 69999999999999999
Q ss_pred ccCCCCcchhhccccceeeccCCcccc
Q 002892 468 LSGEIPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 468 l~~~~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
+++ ++ .+..+++|+.|++++|++.+
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 985 44 78899999999999999864
No 372
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=2e-18 Score=169.06 Aligned_cols=154 Identities=24% Similarity=0.341 Sum_probs=129.6
Q ss_pred cceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCC
Q 002892 362 LRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLAR 441 (870)
Q Consensus 362 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 441 (870)
-+++++++|+++ .+|..+. ++|++|+|++|+++ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 367999999999 4555443 58999999999999 6789999999999999999999998889999999999999999
Q ss_pred CcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccccccc-cccccccCCC
Q 002892 442 NRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLAQSF-LWNYALCGPP 520 (870)
Q Consensus 442 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~-~~n~~~c~~~ 520 (870)
|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.|.+.. ..+..|....+ ..+...|..|
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l-~~l~~~~~~~~~~~~~~~C~~P 166 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNM-QWLSDWVKSEYKEPGIARCAGP 166 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHSSCCCSCCBEEES
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcC-HHHHHHHHhccCCCCCcCcCCc
Confidence 999999889999999999999999999977777899999999999999999998874 23444443322 2223455544
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=3.9e-18 Score=176.16 Aligned_cols=153 Identities=22% Similarity=0.348 Sum_probs=128.6
Q ss_pred hhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccc
Q 002892 308 EIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYIL 387 (870)
Q Consensus 308 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 387 (870)
.+..+++|+.|++++|.+.. + + .+..+++|++|+|++|+|++..+ +..+++|+
T Consensus 36 ~~~~l~~L~~L~l~~n~i~~-l-----------------------~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~ 88 (263)
T 1xeu_A 36 SQKELSGVQNFNGDNSNIQS-L-----------------------A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLE 88 (263)
T ss_dssp CHHHHTTCSEEECTTSCCCC-C-----------------------T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCC
T ss_pred chhhcCcCcEEECcCCCccc-c-----------------------h-HHhhCCCCCEEECCCCccCCChh--hccCCCCC
Confidence 46778888888888888873 2 2 35667889999999999997655 89999999
Q ss_pred eEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCc
Q 002892 388 RIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNN 467 (870)
Q Consensus 388 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 467 (870)
.|+|++|++++ +|. +.. ++|+.|+|++|++++. ..+..+++|+.|+|++|++++. + .+..+++|+.|+|++|+
T Consensus 89 ~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 89 ELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp EEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred EEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 99999999996 443 333 8999999999999864 3589999999999999999875 4 68999999999999999
Q ss_pred ccCCCCcchhhccccceeeccCCcccccC
Q 002892 468 LSGEIPKSFEILSHLKRLNVSHNRLEGKI 496 (870)
Q Consensus 468 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 496 (870)
+++. ..+..+++|+.|++++|++++..
T Consensus 162 i~~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 162 ITNT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CCBC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred Ccch--HHhccCCCCCEEeCCCCcccCCc
Confidence 9965 77889999999999999998763
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.5e-17 Score=162.92 Aligned_cols=137 Identities=23% Similarity=0.315 Sum_probs=119.9
Q ss_pred ccceeecCCcccCCCCCc-ccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEc
Q 002892 361 SLRQLHLGSNQLTSSIPS-SFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSL 439 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 439 (870)
+|++|+|++|+|++..+. .|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 799999999999977775 5899999999999999999988999999999999999999999988889999999999999
Q ss_pred CCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCC
Q 002892 440 ARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 440 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
++|+|++..|..|..+++|+.|+|++|.+++..+.. .-...++...+.++...|..|.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~-~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCSST
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcch-HHHHHHHHcCCCCCCCCCCCCh
Confidence 999999999999999999999999999999765532 1122345556677777777775
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.4e-18 Score=184.59 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=60.5
Q ss_pred ccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCC-EEEccCCccCCcccccccCCCCCCEE
Q 002892 359 LISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLI-YLNLSRNQLSGNIPITIGGLKDLITL 437 (870)
Q Consensus 359 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 437 (870)
+++|+.|+|++|+++.+.+.+|.++.+|+.|+|++| ++.+.+.+|.++++|+ .+++.+ .++.+.+..|.++.+|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 355666666666666555566666666666666665 5545555566666666 666655 4554555556666666666
Q ss_pred EcCCCcccCcccccccCCCCCCeEe
Q 002892 438 SLARNRFQDSIPDSFGSLTSLEYLD 462 (870)
Q Consensus 438 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 462 (870)
++++|.++.+.+.+|.++++|+.|+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 6655655555555566555555554
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=2.7e-19 Score=211.61 Aligned_cols=192 Identities=20% Similarity=0.214 Sum_probs=114.6
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcE-----EEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCC
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKF-----LGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSL 89 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~-----L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 89 (870)
+.++.|+|++|.+.. .|..+.....|.. ++++.|.+. ..|..+..+++|++|+|++|.|. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 567888998888874 4544433333333 334444455 56778888899999999999988 678788888999
Q ss_pred cEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecc
Q 002892 90 VRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGN 169 (870)
Q Consensus 90 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 169 (870)
++|+|++|+|+ .+|..|+.+++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|.++++|++|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999998 88888888999999999999998 77888889999999999999886 66777888889999999999
Q ss_pred cccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCC
Q 002892 170 QLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSN 218 (870)
Q Consensus 170 ~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N 218 (870)
.|++.+|..+......+..++|++|.+++.+|. .|+.|+++.|
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTD 369 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecc
Confidence 888877776643223334577888888877665 3556677766
No 377
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=3.3e-18 Score=176.21 Aligned_cols=137 Identities=21% Similarity=0.301 Sum_probs=106.3
Q ss_pred CCCCCeeccccceeEEEEEe-cCCcE--EEEEEeechhh------------------------HHHHHHHHHHHHHHhcC
Q 002892 587 FNECNLLGAGSFGSVYKGTL-FDGTN--VAIKVFNLQLE------------------------RAFRSFESECEVLRNVR 639 (870)
Q Consensus 587 ~~~~~~lg~G~~g~v~~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 639 (870)
|++.+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|++.+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68889 99999754321 11236788999999998
Q ss_pred CCce--eEEeeeeeeCCeeEEEEecCCC-C----CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccC
Q 002892 640 HRNL--IKIFSSCCNLDFKALVLEFMPN-G----SLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLK 712 (870)
Q Consensus 640 h~ni--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk 712 (870)
|+++ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.|++|||. +.||+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8764 334432 356899999942 3 77776543 2344677899999999999993 2359999999
Q ss_pred CCceeeCCCCceEEecccccccc
Q 002892 713 PNNILLDKNMTARVSDFGISKLL 735 (870)
Q Consensus 713 ~~Nill~~~~~~kl~Dfg~a~~~ 735 (870)
|.||+++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=2.2e-18 Score=184.90 Aligned_cols=291 Identities=13% Similarity=0.093 Sum_probs=174.0
Q ss_pred CCccCCCCCCC--CCCCCeecCCCCccccCCCccccC-CCCCcEEEccCCccc--ccCCccccCCCCCCEEEcCCCcccc
Q 002892 3 LGGTVPPHIGN--LSFLMYLDISENNFRGYLPNELGQ-LRRLKFLGFAYNDLT--GSFPSWIGVFSKLQVLSLRNNSFTG 77 (870)
Q Consensus 3 ~~~~~p~~~~~--l~~L~~L~ls~n~l~~~~p~~~~~-l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~L~~n~i~~ 77 (870)
-.|+++..+.. +.+|+.|.++++ +.......+.. +++|+.|+|++|++. ...+ +.++.++.+.+..|.|.
T Consensus 11 ~~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~---~~~~~~~~~~~~~~~I~- 85 (329)
T 3sb4_A 11 KPGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKA---GTYPNGKFYIYMANFVP- 85 (329)
T ss_dssp STTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESS---SSSGGGCCEEECTTEEC-
T ss_pred CCCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcc---ccccccccccccccccC-
Confidence 45677777665 788999999875 22111123334 788999999999988 2222 23333566777777543
Q ss_pred CCCCCCCC--------CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccc--
Q 002892 78 PIPNSLFN--------LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNL-- 147 (870)
Q Consensus 78 ~~~~~~~~--------l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l-- 147 (870)
+..|.+ +++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+....+.+|..+.++..+.+..+..
T Consensus 86 --~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~ 162 (329)
T 3sb4_A 86 --AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYR 162 (329)
T ss_dssp --TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHH
T ss_pred --HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhh
Confidence 456777 99999999999 88866677899999999999999999878888898888888877765322
Q ss_pred --cccccccccccccce-EEEeecccccccCCCcc---cCCCCccceeeecccccccccCCcc-cCCCCccEEEccCCcc
Q 002892 148 --IGPIPTTIFNISTII-IINLVGNQLSGHRPSTM---GHSLPNRQFLLLWANRLTGTIPNSI-TNASKLIGLDLNSNSL 220 (870)
Q Consensus 148 --~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~---~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~i 220 (870)
......+|.++..|+ .+++....- ++..+ .....+++.+.+.++-.. .....+ ..+++|++|+|++|++
T Consensus 163 ~~~~i~~~~f~~~~~L~~~i~~~~~~~---l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i 238 (329)
T 3sb4_A 163 FKNRWEHFAFIEGEPLETTIQVGAMGK---LEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNA 238 (329)
T ss_dssp TSTTTTTSCEEESCCCEEEEEECTTCC---HHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCC
T ss_pred ccccccccccccccccceeEEecCCCc---HHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCc
Confidence 233455666677766 455543221 11111 111334444444433211 111111 1245666666666666
Q ss_pred cCCCccccccccccccccccccccccccCCCCCcccccccccccccc-eEEcCCCCCCCCCCccccccccchhhhhcccc
Q 002892 221 SGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLR-ALSLGSNPLDSILPPLIGNFSASFQQFYAHEC 299 (870)
Q Consensus 221 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n 299 (870)
+.+.+.+|.++++|+.|+|.+| ++.+.. .+|.+|.+|+ .+++.+ .+..+
T Consensus 239 ~~I~~~aF~~~~~L~~l~l~~n-i~~I~~--------~aF~~~~~L~~~l~l~~-~l~~I-------------------- 288 (329)
T 3sb4_A 239 TTIPDFTFAQKKYLLKIKLPHN-LKTIGQ--------RVFSNCGRLAGTLELPA-SVTAI-------------------- 288 (329)
T ss_dssp CEECTTTTTTCTTCCEEECCTT-CCEECT--------TTTTTCTTCCEEEEECT-TCCEE--------------------
T ss_pred ceecHhhhhCCCCCCEEECCcc-cceehH--------HHhhCChhccEEEEEcc-cceEE--------------------
Confidence 6555555666666666666665 554442 2455666666 666655 33332
Q ss_pred cccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHH
Q 002892 300 KLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQ 340 (870)
Q Consensus 300 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 340 (870)
-+.+|.++++|+.+++++|++....+.+|.++++|+
T Consensus 289 -----~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 289 -----EFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp -----CTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred -----chhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 223455555556666555655555555555555544
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=3e-18 Score=202.58 Aligned_cols=159 Identities=26% Similarity=0.287 Sum_probs=127.3
Q ss_pred CCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCcccccc
Q 002892 24 ENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNI 103 (870)
Q Consensus 24 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 103 (870)
.|.+. ..|+.+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+
T Consensus 210 ~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 210 ENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 33444 45788999999999999999999 78888889999999999999999 89999999999999999999999 88
Q ss_pred CcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccccccccccccc-ceEEEeecccccccCCCcccCC
Q 002892 104 PSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNIST-IIIINLVGNQLSGHRPSTMGHS 182 (870)
Q Consensus 104 ~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~~ 182 (870)
|..|+.+++|++|+|++|.|+ .+|..|+++++|+.|+|++|++++.+|..+..+.. +..|+|++|.+++..|.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----- 359 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----- 359 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc-----
Confidence 999999999999999999998 78888999999999999999999999998877643 34589999999987765
Q ss_pred CCccceeeeccc
Q 002892 183 LPNRQFLLLWAN 194 (870)
Q Consensus 183 l~~L~~L~L~~n 194 (870)
.|..|+++.|
T Consensus 360 --~l~~l~l~~n 369 (727)
T 4b8c_D 360 --ERRFIEINTD 369 (727)
T ss_dssp --C---------
T ss_pred --ccceeEeecc
Confidence 4567777777
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=5.9e-17 Score=156.69 Aligned_cols=142 Identities=26% Similarity=0.291 Sum_probs=123.3
Q ss_pred ccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 361 SLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
+.+.+++++|+++.. |..+. ++|+.|++++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 8 ~~~~l~~~~~~l~~~-p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLTSV-PTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCSSC-CTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCccC-CCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 457899999999854 44332 689999999999998777788999999999999999998877889999999999999
Q ss_pred CCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCccccc
Q 002892 441 RNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNF 505 (870)
Q Consensus 441 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 505 (870)
+|.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+++|.+|....+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~l~~~ 149 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRW 149 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHHHHHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCccHHHHHHH
Confidence 99999888888999999999999999999777777899999999999999999988854444444
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=4.7e-17 Score=155.95 Aligned_cols=134 Identities=22% Similarity=0.276 Sum_probs=121.6
Q ss_pred cccceeecCCcccC-CCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEE
Q 002892 360 ISLRQLHLGSNQLT-SSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLS 438 (870)
Q Consensus 360 ~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 438 (870)
++|++|+|++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 68999999999998 77888899999999999999999965 7899999999999999999987888888899999999
Q ss_pred cCCCcccCcc-cccccCCCCCCeEecCCCcccCCCC---cchhhccccceeeccCCccccc
Q 002892 439 LARNRFQDSI-PDSFGSLTSLEYLDLSNNNLSGEIP---KSFEILSHLKRLNVSHNRLEGK 495 (870)
Q Consensus 439 Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls~N~l~~~ 495 (870)
|++|.+++.. +..+..+++|+.|+|++|++++..+ ..+..+++|+.|++++|.++..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 9999999753 3789999999999999999996555 4899999999999999998643
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=5.7e-17 Score=151.93 Aligned_cols=129 Identities=21% Similarity=0.282 Sum_probs=117.7
Q ss_pred ccccceeecCCcccC-CCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEE
Q 002892 359 LISLRQLHLGSNQLT-SSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITL 437 (870)
Q Consensus 359 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 437 (870)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 78888999999999999999999965 789999999999999999998789888889999999
Q ss_pred EcCCCcccCc-ccccccCCCCCCeEecCCCcccCCCC---cchhhccccceeeccC
Q 002892 438 SLARNRFQDS-IPDSFGSLTSLEYLDLSNNNLSGEIP---KSFEILSHLKRLNVSH 489 (870)
Q Consensus 438 ~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~ls~ 489 (870)
++++|.+++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999974 45889999999999999999997665 5799999999999874
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=3.9e-16 Score=170.73 Aligned_cols=251 Identities=12% Similarity=0.152 Sum_probs=159.6
Q ss_pred ccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCC
Q 002892 199 TIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDS 278 (870)
Q Consensus 199 ~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 278 (870)
+...+|.++ +|+.+++..| ++.+...+|.+. +|+.+.+.. .++.+.. .+|.+|++|+.+++++|.+..
T Consensus 127 I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~--------~aF~~c~~L~~l~l~~n~l~~ 194 (401)
T 4fdw_A 127 IPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKE--------DIFYYCYNLKKADLSKTKITK 194 (401)
T ss_dssp ECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECS--------STTTTCTTCCEEECTTSCCSE
T ss_pred ehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehH--------HHhhCcccCCeeecCCCcceE
Confidence 344445543 4555555544 444445555552 455555553 3443332 245555666666666555554
Q ss_pred CCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccC
Q 002892 279 ILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSS 358 (870)
Q Consensus 279 ~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~ 358 (870)
+....|. ..+|+.+.+..+ +..+...+|.++.+|+.+.+.+++...-..+|.+
T Consensus 195 I~~~aF~--------------------------~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~ 247 (401)
T 4fdw_A 195 LPASTFV--------------------------YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE 247 (401)
T ss_dssp ECTTTTT--------------------------TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTTCCEECTTTTTT
T ss_pred echhhEe--------------------------ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCCccCcccccccc
Confidence 4333222 123444444322 3333334444444444444444443334455655
Q ss_pred ccccceeecCCcccCCCCCcccccccccceEecCCCccC-----CCCcccccCCccCCEEEccCCccCCcccccccCCCC
Q 002892 359 LISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLS-----GSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKD 433 (870)
Q Consensus 359 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 433 (870)
.+|+.+.+ .|.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+....|.++.+
T Consensus 248 -~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 -SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRK 324 (401)
T ss_dssp -CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCS
T ss_pred -CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCC
Confidence 67888888 56677777888888889999988887765 4566788899999999998 4577677788999999
Q ss_pred CCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcc-ccceeeccCCccc
Q 002892 434 LITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILS-HLKRLNVSHNRLE 493 (870)
Q Consensus 434 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~ 493 (870)
|+.++|..| ++.+.+.+|.++ +|+.|++++|.+....+..|.+++ .++.|++..|.+.
T Consensus 325 L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 325 VTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 999999655 666777889998 899999999988877777787774 6788888777643
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=7.2e-16 Score=150.89 Aligned_cols=127 Identities=21% Similarity=0.308 Sum_probs=92.1
Q ss_pred CeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCC
Q 002892 18 MYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFN 97 (870)
Q Consensus 18 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 97 (870)
+.+++++|+++ .+|..+. ++|++|++++|.++ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56788888877 4665543 57778888888777 66777777777777777777777666666777777777777777
Q ss_pred ccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccc
Q 002892 98 SISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLI 148 (870)
Q Consensus 98 ~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~ 148 (870)
+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666667777777777777777777555556667777777777776664
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.65 E-value=2e-15 Score=166.15 Aligned_cols=335 Identities=12% Similarity=0.086 Sum_probs=168.4
Q ss_pred cccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccccccc
Q 002892 75 FTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTT 154 (870)
Q Consensus 75 i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 154 (870)
++.....+|.++++|+.+.+..+ ++.+...+|.++++|+.+++.++ ++.....+|.++++|+.+.+..+ +......+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 44444456677777777777633 55444556777777777777644 45455566677777776665533 33333444
Q ss_pred ccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccccccc
Q 002892 155 IFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHL 234 (870)
Q Consensus 155 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 234 (870)
|.++..+....... +......+|.++++|+.+.+.++... +...+|.++.+|
T Consensus 136 F~~~~~~~~~~~~~---------------------------~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L 187 (394)
T 4fs7_A 136 FKGCDFKEITIPEG---------------------------VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKL 187 (394)
T ss_dssp TTTCCCSEEECCTT---------------------------CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTC
T ss_pred eecccccccccCcc---------------------------ccccchhhhcccCCCcEEecCCccce-eccccccCCCCc
Confidence 44433222211111 11123345555566666666544322 445555666666
Q ss_pred ccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccC
Q 002892 235 STLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRG 314 (870)
Q Consensus 235 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~ 314 (870)
+.+.+..| ++.+.. .++..+..|+.+.+..+... + ........+
T Consensus 188 ~~i~l~~~-~~~I~~--------~~F~~~~~L~~i~~~~~~~~-i--------------------------~~~~~~~~~ 231 (394)
T 4fs7_A 188 KSIKLPRN-LKIIRD--------YCFAECILLENMEFPNSLYY-L--------------------------GDFALSKTG 231 (394)
T ss_dssp CBCCCCTT-CCEECT--------TTTTTCTTCCBCCCCTTCCE-E--------------------------CTTTTTTCC
T ss_pred eEEEcCCC-ceEeCc--------hhhccccccceeecCCCceE-e--------------------------ehhhcccCC
Confidence 66655544 333221 23445555555544433211 0 011111223
Q ss_pred CcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCC
Q 002892 315 LIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSN 394 (870)
Q Consensus 315 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 394 (870)
|+.+.+..+ +.......|..+..|+.+.+.++........|.....++.+....+.+ ....|..+.+|+.+.+.++
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 333333221 111222222222222222222222222333445555566555554432 2345666667777766654
Q ss_pred ccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCc
Q 002892 395 SLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPK 474 (870)
Q Consensus 395 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 474 (870)
++.+...+|.++++|+.++|.++ ++.+....|.++.+|+.+++..| ++.+...+|.++++|+.+++..+ ++ .+..
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~ 382 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRY 382 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGG
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-Ehhh
Confidence 44355556667777777777543 55455566777777777777665 55555666777777777777544 33 3345
Q ss_pred chhhcccccee
Q 002892 475 SFEILSHLKRL 485 (870)
Q Consensus 475 ~~~~l~~L~~L 485 (870)
.|.+.++|+.+
T Consensus 383 ~F~~c~~L~~I 393 (394)
T 4fs7_A 383 DFEDTTKFKWI 393 (394)
T ss_dssp GBCTTCEEEEE
T ss_pred eecCCCCCcEE
Confidence 56666666543
No 386
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=5.2e-16 Score=148.63 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=73.1
Q ss_pred CCCcEEeccCCccc-cccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEE
Q 002892 87 SSLVRLDSRFNSIS-GNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIIN 165 (870)
Q Consensus 87 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 165 (870)
++|++|++++|.++ +.+|..+..+++|++|++++|.|++. ..+..+++|++|++++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444555555444 34444445555555555555555532 4455555555555555555544444444455555555
Q ss_pred eecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCc---ccccccccccccccccc
Q 002892 166 LVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIP---NTFGNLRHLSTLNIRAN 242 (870)
Q Consensus 166 l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~---~~~~~l~~L~~L~L~~N 242 (870)
+++|++++.. .+..+..+++|++|++++|++++..+ ..|..+++|++|++++|
T Consensus 102 Ls~N~l~~~~------------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 102 LSGNKLKDIS------------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp CBSSSCCSSG------------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred ccCCccCcch------------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 5555544211 11345566667777777777765444 35667777777777777
Q ss_pred cccccc
Q 002892 243 YLTTET 248 (870)
Q Consensus 243 ~l~~~~ 248 (870)
.+..++
T Consensus 158 ~~~~~~ 163 (168)
T 2ell_A 158 EDQEAP 163 (168)
T ss_dssp TSCBCC
T ss_pred Chhhcc
Confidence 666544
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=1e-14 Score=159.40 Aligned_cols=251 Identities=12% Similarity=0.083 Sum_probs=153.1
Q ss_pred CCCCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEec
Q 002892 15 SFLMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDS 94 (870)
Q Consensus 15 ~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 94 (870)
..++.+.+.+ +++.....+|.+. +|+.+.+..+ ++......|.+ .+|+.+.+.. .++...+..|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4555666543 3444445566664 5777777665 55444555555 3577777765 555455566777777777777
Q ss_pred cCCccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeeccccccc
Q 002892 95 RFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGH 174 (870)
Q Consensus 95 ~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 174 (870)
++|+++......|. ..+|+.+.|..+ ++.....+|.++++|+.+++..| ++.+...+|.+ .+|+.+++. |.++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~- 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN- 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE-
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE-
Confidence 77777644444455 467777777643 55556667777777777777654 45455555555 667777773 33443
Q ss_pred CCCcccCCCCccceeeecccccc-----cccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccC
Q 002892 175 RPSTMGHSLPNRQFLLLWANRLT-----GTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETS 249 (870)
Q Consensus 175 ~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 249 (870)
++...+..+++|+.+.+.+|.+. .+.+.+|.++++|+.++|. +.++.+...+|.++++|+.+.|..| ++.+..
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 23333345666777777666554 3556667777777777777 3466566667777777777777544 554432
Q ss_pred CCCCcccccccccccccceEEcCCCCCCCCCCcccccc
Q 002892 250 SNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNF 287 (870)
Q Consensus 250 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 287 (870)
.+|.++ +|+.+++++|.+..+.+..|.++
T Consensus 340 --------~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~ 368 (401)
T 4fdw_A 340 --------SAFNNT-GIKEVKVEGTTPPQVFEKVWYGF 368 (401)
T ss_dssp --------TSSSSS-CCCEEEECCSSCCBCCCSSCCCS
T ss_pred --------HhCCCC-CCCEEEEcCCCCcccccccccCC
Confidence 256666 77777777776665544444433
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=1.7e-16 Score=148.60 Aligned_cols=126 Identities=21% Similarity=0.168 Sum_probs=60.0
Q ss_pred CCCCeecCCCCccc-cCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEe
Q 002892 15 SFLMYLDISENNFR-GYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLD 93 (870)
Q Consensus 15 ~~L~~L~ls~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 93 (870)
++|++|++++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.|++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 34444455555555555555555532 4445555555555555555533444444445555555
Q ss_pred ccCCccccc-cCcCCCCcCCccEEEeecCccceecC---CcccCCCCCCeeec
Q 002892 94 SRFNSISGN-IPSKIGNLTKLVHLNFADNNLRGEIP---NEIGNLKNLADLVL 142 (870)
Q Consensus 94 L~~n~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~l~~l~~L~~L~L 142 (870)
+++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 555554421 12344444445555555554443222 23444444444444
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.62 E-value=8e-16 Score=147.23 Aligned_cols=118 Identities=25% Similarity=0.276 Sum_probs=93.9
Q ss_pred cceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCC
Q 002892 386 ILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSN 465 (870)
Q Consensus 386 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 465 (870)
.+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456777777777 4665553 6788888888888887788888888888888888888887777788888899999999
Q ss_pred CcccCCCCcchhhccccceeeccCCcccccCCCCCcccccc
Q 002892 466 NNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 466 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
|+|++..+..|..+++|+.|+|++|+|+|.++....+..|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l 128 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWI 128 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHH
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHH
Confidence 99887667778888999999999999988887544444443
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=3.3e-15 Score=144.38 Aligned_cols=131 Identities=18% Similarity=0.136 Sum_probs=86.7
Q ss_pred CCeecCCCCccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccC
Q 002892 17 LMYLDISENNFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRF 96 (870)
Q Consensus 17 L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 96 (870)
.+.+++++++++ .+|..+ .++|++|++++|++++..+..++.+++|++|+|++|+|++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466777777776 455433 35777777777777755555667777777777777777754444567777777777777
Q ss_pred CccccccCcCCCCcCCccEEEeecCccceecCCcccCCCCCCeeeccccccccc
Q 002892 97 NSISGNIPSKIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGP 150 (870)
Q Consensus 97 n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 150 (870)
|++++..+..+..+++|++|++++|++++..+..+..+++|++|++++|.+.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 777755555566677777777777777754454556666777777776666543
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=9e-16 Score=148.10 Aligned_cols=134 Identities=20% Similarity=0.222 Sum_probs=116.2
Q ss_pred cccCccccceeecCCcccCCCCCccccccc-ccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCC
Q 002892 355 CLSSLISLRQLHLGSNQLTSSIPSSFWSLE-YILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKD 433 (870)
Q Consensus 355 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 433 (870)
.+...++|++|+|++|+++.. |. +..+. +|+.|++++|.+++. ..|..+++|++|+|++|+|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 356678999999999999954 54 55554 999999999999965 68999999999999999999766666799999
Q ss_pred CCEEEcCCCcccCcccc--cccCCCCCCeEecCCCcccCCCCcc----hhhccccceeeccCCcccc
Q 002892 434 LITLSLARNRFQDSIPD--SFGSLTSLEYLDLSNNNLSGEIPKS----FEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 434 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~ls~N~l~~ 494 (870)
|+.|+|++|.|+. +|. .+..+++|+.|+|++|.++ .+|.. +..+++|+.||+++|....
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999999975 555 8999999999999999998 56664 8999999999999998764
No 392
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60 E-value=1.7e-16 Score=168.79 Aligned_cols=139 Identities=11% Similarity=0.083 Sum_probs=100.3
Q ss_pred CCCCCCeeccccceeEEEEEecCCcEEEEEEeechhh----------------------HHHHHHHHHHHHHHhcCCCce
Q 002892 586 GFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLE----------------------RAFRSFESECEVLRNVRHRNL 643 (870)
Q Consensus 586 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~ni 643 (870)
-|++.+.||+|++|.||+|...+|+.||||+++.... ........|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4889999999999999999988999999999753210 001112346666666654443
Q ss_pred eEEeeeeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCC-
Q 002892 644 IKIFSSCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNM- 722 (870)
Q Consensus 644 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~- 722 (870)
....-+.. ...++||||++|+++.++... .....++.|++.++.+|| +.|||||||||.|||+++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence 21111111 234799999999888654321 133568899999999999 56799999999999998776
Q ss_pred ---------ceEEeccccccccC
Q 002892 723 ---------TARVSDFGISKLLG 736 (870)
Q Consensus 723 ---------~~kl~Dfg~a~~~~ 736 (870)
.+.|+||+-+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 38999999876553
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.59 E-value=2.5e-15 Score=144.27 Aligned_cols=116 Identities=24% Similarity=0.281 Sum_probs=83.0
Q ss_pred ceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCC
Q 002892 387 LRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNN 466 (870)
Q Consensus 387 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 466 (870)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|+++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 4555553 67777777777777777777777777777788877777766666777888888888888
Q ss_pred cccCCCCcchhhccccceeeccCCcccccCCCCCccccc
Q 002892 467 NLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNF 505 (870)
Q Consensus 467 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 505 (870)
+|++..+..|..+++|+.|+|++|+|.|.++....+..|
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~~~ 130 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNW 130 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHHHH
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccHHHHHHH
Confidence 887655556777888888888888888776644444444
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=4.7e-14 Score=155.20 Aligned_cols=336 Identities=12% Similarity=0.024 Sum_probs=197.8
Q ss_pred ccccCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCc
Q 002892 26 NFRGYLPNELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPS 105 (870)
Q Consensus 26 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 105 (870)
.++.....+|.++.+|+.+.+..+ ++......|.++++|+.++|.++ ++......|.++.+|+.+.+..+ +......
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 355455567888888888888644 66455667888888888888765 55455567888888888777755 3335556
Q ss_pred CCCCcCCccEEEeecCccceecCCcccCCCCCCeeecccccccccccccccccccceEEEeecccccccCCCcccCCCCc
Q 002892 106 KIGNLTKLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPN 185 (870)
Q Consensus 106 ~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 185 (870)
+|..+..++.... +.+......+|.++++|+.+.+.++. ......+|.++.+|+.+++..| ++ .
T Consensus 135 aF~~~~~~~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~-~----------- 198 (394)
T 4fs7_A 135 AFKGCDFKEITIP--EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LK-I----------- 198 (394)
T ss_dssp TTTTCCCSEEECC--TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CC-E-----------
T ss_pred eeecccccccccC--ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ce-E-----------
Confidence 6776654433332 22333456678888888888887553 4455667777777777776654 22 1
Q ss_pred cceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccccccccc
Q 002892 186 RQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNK 265 (870)
Q Consensus 186 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~ 265 (870)
+....|.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++.+. ...+..+..
T Consensus 199 -------------I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~--------~~~f~~~~~ 254 (394)
T 4fs7_A 199 -------------IRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELG--------KSVFYGCTD 254 (394)
T ss_dssp -------------ECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEEC--------SSTTTTCSS
T ss_pred -------------eCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecc--------ccccccccc
Confidence 22233444444444444433222 1111222233444443321 11111 113444555
Q ss_pred cceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhc
Q 002892 266 LRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQR 345 (870)
Q Consensus 266 L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 345 (870)
|+.+.+..+... .....+.....++.+....+.+.
T Consensus 255 l~~~~~~~~~~~--------------------------i~~~~F~~~~~l~~~~~~~~~i~------------------- 289 (394)
T 4fs7_A 255 LESISIQNNKLR--------------------------IGGSLFYNCSGLKKVIYGSVIVP------------------- 289 (394)
T ss_dssp CCEEEECCTTCE--------------------------ECSCTTTTCTTCCEEEECSSEEC-------------------
T ss_pred ceeEEcCCCcce--------------------------eeccccccccccceeccCceeec-------------------
Confidence 555555443211 11223444445555544433221
Q ss_pred CCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCccc
Q 002892 346 NNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIP 425 (870)
Q Consensus 346 n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 425 (870)
...|..+.+|+.+.+..+ ++.+...+|.++.+|+.++|.++ ++.+...+|.++++|+.+++..| ++.+..
T Consensus 290 -------~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~ 359 (394)
T 4fs7_A 290 -------EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGA 359 (394)
T ss_dssp -------TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred -------cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehH
Confidence 123455566777777554 65566777888888888888654 55456677888888888888766 665667
Q ss_pred ccccCCCCCCEEEcCCCcccCcccccccCCCCCCeE
Q 002892 426 ITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYL 461 (870)
Q Consensus 426 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 461 (870)
..|.++.+|+.+++..+ ++ ....+|.++++|+.+
T Consensus 360 ~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 360 NAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 78888888888888755 33 345678888877764
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.9e-17 Score=162.00 Aligned_cols=162 Identities=23% Similarity=0.304 Sum_probs=119.2
Q ss_pred hhCccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccce
Q 002892 309 IGNLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILR 388 (870)
Q Consensus 309 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 388 (870)
+.....++.++++.+.+.+..|. ...+|..+..+++|++|+|++|++++ +| .+..+++|+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~-----------------l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~ 74 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP-----------------IEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRI 74 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT-----------------CCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCE
T ss_pred HHhcccccCcchheeEeccccCc-----------------HhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCE
Confidence 44455666667777777654442 12344467777888888888888886 45 7888888888
Q ss_pred EecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCccc-ccccCCCCCCeEecCCCc
Q 002892 389 IDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIP-DSFGSLTSLEYLDLSNNN 467 (870)
Q Consensus 389 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 467 (870)
|++++|.++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.
T Consensus 75 L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 75 LSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp EEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred EECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 888888888 567777777888888888888885 44 57788888888888888875433 467888888888888888
Q ss_pred ccCCCCcc----------hhhccccceeeccCCcccc
Q 002892 468 LSGEIPKS----------FEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 468 l~~~~p~~----------~~~l~~L~~L~ls~N~l~~ 494 (870)
+++..|.. +..+++|+.|| +|+++.
T Consensus 152 l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred cccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 87665542 77788888776 676653
No 396
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.3e-15 Score=144.13 Aligned_cols=133 Identities=16% Similarity=0.189 Sum_probs=69.5
Q ss_pred ccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCcCCCCcCCcc
Q 002892 35 LGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPSKIGNLTKLV 114 (870)
Q Consensus 35 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 114 (870)
+..+.+|+.|++++|+++ .+|......++|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..+..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 444555555555555555 3333222223555666666555532 4555555666666666665533223335556666
Q ss_pred EEEeecCccceecCC--cccCCCCCCeeecccccccccccc----cccccccceEEEeeccccc
Q 002892 115 HLNFADNNLRGEIPN--EIGNLKNLADLVLALNNLIGPIPT----TIFNISTIIIINLVGNQLS 172 (870)
Q Consensus 115 ~L~l~~N~l~~~~~~--~l~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~l~~N~l~ 172 (870)
+|++++|+|+ .+|. .+..+++|+.|++++|.++. .|. .+..+++|+.||+++|.+.
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 6666666655 3333 45555566666666665552 233 2555555555555555543
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=3e-17 Score=161.97 Aligned_cols=136 Identities=23% Similarity=0.302 Sum_probs=81.4
Q ss_pred CCCCCCCeecCCCCccccCCCc------cccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCccccCCCCCCCC
Q 002892 12 GNLSFLMYLDISENNFRGYLPN------ELGQLRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFN 85 (870)
Q Consensus 12 ~~l~~L~~L~ls~n~l~~~~p~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 85 (870)
.....++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .++.+++|++|+|++|+|+ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445666777777777666554 56666666666666666663 45 5666666666666666666 45555555
Q ss_pred CCCCcEEeccCCccccccCcCCCCcCCccEEEeecCccceecC-CcccCCCCCCeeeccccccccccc
Q 002892 86 LSSLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNNLRGEIP-NEIGNLKNLADLVLALNNLIGPIP 152 (870)
Q Consensus 86 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~ 152 (870)
+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 5666666666666653 33 35556666666666666663221 345556666666666666654433
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=7.1e-14 Score=133.60 Aligned_cols=109 Identities=25% Similarity=0.239 Sum_probs=98.7
Q ss_pred ccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcC
Q 002892 361 SLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLA 440 (870)
Q Consensus 361 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 440 (870)
..+.+++++|+++. +|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 46789999999995 565553 889999999999998889999999999999999999998888889999999999999
Q ss_pred CCcccCcccccccCCCCCCeEecCCCcccCCC
Q 002892 441 RNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEI 472 (870)
Q Consensus 441 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 472 (870)
+|+|++..+..|..+++|+.|+|++|.++...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999888888999999999999999998543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5.5e-14 Score=134.78 Aligned_cols=113 Identities=21% Similarity=0.205 Sum_probs=99.1
Q ss_pred cceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCC
Q 002892 362 LRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLAR 441 (870)
Q Consensus 362 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 441 (870)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 468999999998 5566554 8999999999999988899999999999999999999987777889999999999999
Q ss_pred CcccCcccccccCCCCCCeEecCCCcccCCCCcchhh
Q 002892 442 NRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEI 478 (870)
Q Consensus 442 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 478 (870)
|+|++..+..|..+++|+.|+|++|.+. ..+..+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~~~~ 126 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRDIMY 126 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGGGHH
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc-cccccHHH
Confidence 9999877777999999999999999998 44544333
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.43 E-value=2.2e-12 Score=141.78 Aligned_cols=336 Identities=12% Similarity=0.117 Sum_probs=170.4
Q ss_pred cccCCCCCCCCCC-CCcEEeccCCccccccCcCCCCcCCccEEEeecCc---cceecCCcccCCCCCCeeeccccccccc
Q 002892 75 FTGPIPNSLFNLS-SLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNN---LRGEIPNEIGNLKNLADLVLALNNLIGP 150 (870)
Q Consensus 75 i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~---l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 150 (870)
++......|.++. .|+.+.+..+ ++.+...+|.++.+|+.+.+..|. ++.....+|..+.+|+.+.+..+ ++..
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 3433444566663 4777777644 554556677777777777777653 55455667777777777766543 4445
Q ss_pred ccccccccccceEEEeecccccccCCCcccCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCcccccc
Q 002892 151 IPTTIFNISTIIIINLVGNQLSGHRPSTMGHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGN 230 (870)
Q Consensus 151 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 230 (870)
...+|..+.+|+.+.+..+- . . +....|..+.+|+.+.+..+ +..+...+|.+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~~-~-~------------------------I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~ 181 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEGV-T-S------------------------VADGMFSYCYSLHTVTLPDS-VTAIEERAFTG 181 (394)
T ss_dssp CTTTTTTCTTCCEEECCTTC-C-E------------------------ECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred hhhhhhhhccccccccccee-e-e------------------------ecccceecccccccccccce-eeEeccccccc
Confidence 55566666666666654332 1 1 22334444444554444433 22233333432
Q ss_pred ccccccccccccccccccCCCCCcccccccccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhh
Q 002892 231 LRHLSTLNIRANYLTTETSSNGEWSFLSSLTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIG 310 (870)
Q Consensus 231 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~ 310 (870)
.+|+.+.+..+-.. +. ..++..+..++......+......-..+... .........+.
T Consensus 182 -~~l~~i~ip~~~~~-i~--------~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~ 239 (394)
T 4gt6_A 182 -TALTQIHIPAKVTR-IG--------TNAFSECFALSTITSDSESYPAIDNVLYEKS------------ANGDYALIRYP 239 (394)
T ss_dssp -CCCSEEEECTTCCE-EC--------TTTTTTCTTCCEEEECCSSSCBSSSCEEEEC------------TTSCEEEEECC
T ss_pred -cceeEEEECCcccc-cc--------cchhhhccccceecccccccccccceeeccc------------ccccccccccc
Confidence 33444444332111 11 1234444444444444333222110000000 00000000000
Q ss_pred CccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEe
Q 002892 311 NLRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRID 390 (870)
Q Consensus 311 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 390 (870)
....+..+.+ | +.+...-..+|.++..|+.+.+..+..+ +...+|.+++.|+.+.
T Consensus 240 ~~~~~~~~~i---------p---------------~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 240 SQREDPAFKI---------P---------------NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIE 294 (394)
T ss_dssp TTCCCSEEEC---------C---------------TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEE
T ss_pred cccccceEEc---------C---------------CcceEcccceeeecccccEEecccccce-ecCccccccccccccc
Confidence 1111111111 1 1111222345666667777777655443 6667777777777777
Q ss_pred cCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccC
Q 002892 391 LSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSG 470 (870)
Q Consensus 391 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 470 (870)
+. +.++.+...+|.++.+|+.++|..+ ++.+....|.++.+|+.+.+..+ ++.+...+|.++++|+.+++.+|...
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~- 370 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ- 370 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH-
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee-
Confidence 75 3444455667777778888877654 55556667778888888888654 55566677888888888888777543
Q ss_pred CCCcchhhccccceeeccCCcc
Q 002892 471 EIPKSFEILSHLKRLNVSHNRL 492 (870)
Q Consensus 471 ~~p~~~~~l~~L~~L~ls~N~l 492 (870)
-..+....+|+.+.+..|.+
T Consensus 371 --~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 371 --WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp --HHTCBCCCCC----------
T ss_pred --hhhhhccCCCCEEEeCCCCE
Confidence 13455666777777766644
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=5.4e-13 Score=144.16 Aligned_cols=132 Identities=18% Similarity=0.123 Sum_probs=81.5
Q ss_pred eeecCCc-ccCCCCCcccccccccceEecCC-CccCCCCcccccCCccCCEEEccCCccCCcccccccCCCCCCEEEcCC
Q 002892 364 QLHLGSN-QLTSSIPSSFWSLEYILRIDLSS-NSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKDLITLSLAR 441 (870)
Q Consensus 364 ~L~Ls~N-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 441 (870)
.++++++ +|++ +|. +..+++|+.|+|++ |.|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 6663 455 66677777777774 777766666677777777777777777766666677777777777777
Q ss_pred CcccCcccccccCCCCCCeEecCCCcccCCCC-cchhhccccceeeccCCcccccCCC
Q 002892 442 NRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIP-KSFEILSHLKRLNVSHNRLEGKIPT 498 (870)
Q Consensus 442 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~ 498 (870)
|+|++..+..|..++ |+.|+|++|.+...-. ..|..+.......+..+.++|..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777665555555554 7777777776663221 2233333333444455566665554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=9.8e-13 Score=142.13 Aligned_cols=130 Identities=22% Similarity=0.215 Sum_probs=106.3
Q ss_pred ceEecCCC-ccCCCCcccccCCccCCEEEccC-CccCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecC
Q 002892 387 LRIDLSSN-SLSGSLPSDIQNLKVLIYLNLSR-NQLSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLS 464 (870)
Q Consensus 387 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 464 (870)
..++++++ .|+ .+|. +..+++|+.|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5787 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccccc---cccccccccCCC
Q 002892 465 NNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFLAQ---SFLWNYALCGPP 520 (870)
Q Consensus 465 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~---~~~~n~~~c~~~ 520 (870)
+|+|++..+..|..++ |+.|+|++|+|.|.+.. ..+..|... .+..+...|..|
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l-~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCAL-RWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGG-HHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCcc-HHHHHHHHhCcccccccCCCCCCC
Confidence 9999977777777776 99999999999998763 234444322 223345566544
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=4.8e-12 Score=139.07 Aligned_cols=311 Identities=11% Similarity=0.104 Sum_probs=195.6
Q ss_pred CcCCCCcC-CccEEEeecCccceecCCcccCCCCCCeeeccccc---ccccccccccccccceEEEeecccccccCCCcc
Q 002892 104 PSKIGNLT-KLVHLNFADNNLRGEIPNEIGNLKNLADLVLALNN---LIGPIPTTIFNISTIIIINLVGNQLSGHRPSTM 179 (870)
Q Consensus 104 ~~~~~~l~-~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 179 (870)
..+|.++. .|+.+.+..+ ++.....+|.++++|+.+.++.|. ++.+...+|.+
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~---------------------- 112 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMF---------------------- 112 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTT----------------------
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchh----------------------
Confidence 34455543 3565555433 443445555555555555555442 22222333333
Q ss_pred cCCCCccceeeecccccccccCCcccCCCCccEEEccCCcccCCCccccccccccccccccccccccccCCCCCcccccc
Q 002892 180 GHSLPNRQFLLLWANRLTGTIPNSITNASKLIGLDLNSNSLSGQIPNTFGNLRHLSTLNIRANYLTTETSSNGEWSFLSS 259 (870)
Q Consensus 180 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 259 (870)
..+|+.+.+..+ ++.+....|..+.+|+.+.+..+. ..+...+|....+|+.+.+..+ ++.+... +
T Consensus 113 ---c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~--------a 178 (394)
T 4gt6_A 113 ---CSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEER--------A 178 (394)
T ss_dssp ---CTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTT--------T
T ss_pred ---cccceeeccCCc-cceehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccc--------c
Confidence 444444444433 343556778888888888887553 3366777888888888888654 4443321 2
Q ss_pred cccccccceEEcCCCCCCCCCCccccccccchhhhhcccccccccCchhhhCccCCcEEEeeCCCccccCCchhhchhhH
Q 002892 260 LTNCNKLRALSLGSNPLDSILPPLIGNFSASFQQFYAHECKLKGSIPKEIGNLRGLIALSLFTNDLNGTIPTTLGRLQQL 339 (870)
Q Consensus 260 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~l~~l~l~~n~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 339 (870)
|. ...|+.+.+..+-. . .-..++.....+.......+.........+....
T Consensus 179 F~-~~~l~~i~ip~~~~-~-------------------------i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~-- 229 (394)
T 4gt6_A 179 FT-GTALTQIHIPAKVT-R-------------------------IGTNAFSECFALSTITSDSESYPAIDNVLYEKSA-- 229 (394)
T ss_dssp TT-TCCCSEEEECTTCC-E-------------------------ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECT--
T ss_pred cc-ccceeEEEECCccc-c-------------------------cccchhhhccccceecccccccccccceeecccc--
Confidence 32 34577776654321 1 2234556666677766665554421111111100
Q ss_pred HHHHhcCCCCCCCcccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCc
Q 002892 340 QALLQRNNLNGPIPTCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQ 419 (870)
Q Consensus 340 ~~L~l~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 419 (870)
........+.....+..+.+. +.++.+...+|.++..|+.+.+.++..+ +...+|.++++|+.+.+. +.
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~ 298 (394)
T 4gt6_A 230 --------NGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SR 298 (394)
T ss_dssp --------TSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TT
T ss_pred --------cccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-Cc
Confidence 000000112222344445443 3455567789999999999999877665 677889999999999996 56
Q ss_pred cCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCccc
Q 002892 420 LSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 420 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 493 (870)
++.+....|.++.+|+.+++..+ ++.+...+|.++.+|+.+.|..+ ++..-..+|.++++|+.+++.+|...
T Consensus 299 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~ 370 (394)
T 4gt6_A 299 ITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ 370 (394)
T ss_dssp CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH
T ss_pred ccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee
Confidence 76677789999999999999875 66677889999999999999755 77566789999999999999998653
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=2.1e-13 Score=147.60 Aligned_cols=164 Identities=20% Similarity=0.207 Sum_probs=122.8
Q ss_pred ccCCcEEEeeCCCccccCCchhhchhhHHHHHhcCCCCCCCccccc-CccccceeecCCcccCCCCCccc-ccccccceE
Q 002892 312 LRGLIALSLFTNDLNGTIPTTLGRLQQLQALLQRNNLNGPIPTCLS-SLISLRQLHLGSNQLTSSIPSSF-WSLEYILRI 389 (870)
Q Consensus 312 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~n~~~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L 389 (870)
++.|+.|+|++|.++......+.. .+. ..++|++|+|++|.|+......+ ..+++|+.|
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~-------------------~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L 131 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAA-------------------VLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKL 131 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHH-------------------HHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEE
T ss_pred HhhCCEEEecCCCCCHHHHHHHHH-------------------HHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHh
Confidence 467889999999997433322221 112 23589999999999975444444 356789999
Q ss_pred ecCCCccCCCCcccc-----cCCccCCEEEccCCccCCc----ccccccCCCCCCEEEcCCCcccCcc----cccccCCC
Q 002892 390 DLSSNSLSGSLPSDI-----QNLKVLIYLNLSRNQLSGN----IPITIGGLKDLITLSLARNRFQDSI----PDSFGSLT 456 (870)
Q Consensus 390 ~Ls~N~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~ 456 (870)
+|++|.++......+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...+
T Consensus 132 ~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 132 GLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp ECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred hcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 999999975444444 2467899999999999753 3444577899999999999998643 56678888
Q ss_pred CCCeEecCCCcccCC----CCcchhhccccceeeccCCcccc
Q 002892 457 SLEYLDLSNNNLSGE----IPKSFEILSHLKRLNVSHNRLEG 494 (870)
Q Consensus 457 ~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~ 494 (870)
+|+.|+|++|.|+.. +...+...++|+.|+|++|+++.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 999999999999853 34445567999999999999864
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=3e-14 Score=154.27 Aligned_cols=112 Identities=20% Similarity=0.142 Sum_probs=59.4
Q ss_pred cCCccEEEeecCccceecCCcccC-----CCCCCeeeccccccccccccccc-ccccceEEEeecccccccCCCccc---
Q 002892 110 LTKLVHLNFADNNLRGEIPNEIGN-----LKNLADLVLALNNLIGPIPTTIF-NISTIIIINLVGNQLSGHRPSTMG--- 180 (870)
Q Consensus 110 l~~L~~L~l~~N~l~~~~~~~l~~-----l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~--- 180 (870)
++.|++|+|++|.|+......+.. .++|++|+|++|.+++.....+. .+++|+.|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 456788888888877443333322 25777888887777644333333 355677777777776543332221
Q ss_pred -CCCCccceeeecccccccc----cCCcccCCCCccEEEccCCccc
Q 002892 181 -HSLPNRQFLLLWANRLTGT----IPNSITNASKLIGLDLNSNSLS 221 (870)
Q Consensus 181 -~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~i~ 221 (870)
...++|+.|+|++|.|++. ++..+..+++|++|+|++|.|+
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 1234455555555554432 1222233444455555555444
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=1.6e-11 Score=126.81 Aligned_cols=147 Identities=14% Similarity=0.087 Sum_probs=115.1
Q ss_pred HHHhhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCceeEEeeeeeeCCeeEE
Q 002892 580 IQQATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRNLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 580 ~~~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~l 658 (870)
+....++|++....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..|+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3455678888888999999999999744 6899999987532222345888999999884 6678889999988889999
Q ss_pred EEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 002892 659 VLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSH------------------------------------ 702 (870)
Q Consensus 659 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~------------------------------------ 702 (870)
||||++|.++.+.+. +......++.+++++++.||...
T Consensus 88 v~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999987632 11223468889999999999711
Q ss_pred --------------------CCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 703 --------------------STPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 703 --------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
...++|||++|.||++++++.+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876566799998765
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.12 E-value=1.2e-09 Score=119.28 Aligned_cols=123 Identities=11% Similarity=0.062 Sum_probs=83.6
Q ss_pred ccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCC
Q 002892 354 TCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKD 433 (870)
Q Consensus 354 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 433 (870)
.+|.....|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+.+.++.++.+....|.++.+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCC
Confidence 34555666777777655 55566677777777777777654 44355567777778888888777777666677888888
Q ss_pred CCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhcc
Q 002892 434 LITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILS 480 (870)
Q Consensus 434 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 480 (870)
|+.++|..+ ++.+...+|.++++|+.+.+..+ ++..-..+|.+..
T Consensus 312 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 312 LSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 888888654 55566677888888888877654 5534455666553
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.12 E-value=9.7e-10 Score=120.06 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=102.0
Q ss_pred ccccCccccceeecCCcccCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccCCccCCcccccccCCCC
Q 002892 354 TCLSSLISLRQLHLGSNQLTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSRNQLSGNIPITIGGLKD 433 (870)
Q Consensus 354 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 433 (870)
..+....+|+.+.+..+ ++.+...+|.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+....|.++.+
T Consensus 211 ~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~ 287 (379)
T 4h09_A 211 YGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSN 287 (379)
T ss_dssp TTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTT
T ss_pred cccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccc
Confidence 34555667777777554 55567778888888999888776 55466678888888999888654 55566678888899
Q ss_pred CCEEEcCCCcccCcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCC
Q 002892 434 LITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHN 490 (870)
Q Consensus 434 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 490 (870)
|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+
T Consensus 288 L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 288 LTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999999888888777788999999999998755 66455678888888888887654
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=1.4e-10 Score=119.59 Aligned_cols=139 Identities=15% Similarity=0.079 Sum_probs=101.6
Q ss_pred hhcCCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc--eeEEeeeeeeCCeeEEEE
Q 002892 583 ATDGFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN--LIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 583 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~ 660 (870)
...++.+..+.+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +.+++++....+..++||
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred hcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 34455543333466669999998777888999997654 2245778999998886444 556888888777889999
Q ss_pred ecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 002892 661 EFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSH-------------------------------------- 702 (870)
Q Consensus 661 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~-------------------------------------- 702 (870)
||++|.++. ... .+ ...++.++++.++.||...
T Consensus 95 e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 95 GEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp ECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred EecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 999998884 211 11 2356778888888888532
Q ss_pred -----------------CCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 703 -----------------STPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 703 -----------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
..+++|||++|.||++++++.+.++|||.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=8.5e-11 Score=125.87 Aligned_cols=185 Identities=12% Similarity=0.116 Sum_probs=91.6
Q ss_pred ccCCCCCcEEEccCCccc---------ccCCccccCCCCCCEEEcCCCccccCCCCCCCCCCCCcEEeccCCccccccCc
Q 002892 35 LGQLRRLKFLGFAYNDLT---------GSFPSWIGVFSKLQVLSLRNNSFTGPIPNSLFNLSSLVRLDSRFNSISGNIPS 105 (870)
Q Consensus 35 ~~~l~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 105 (870)
+..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHH
Confidence 345666777766554321 123344455566666666655211 1222 22 55666666666655432222
Q ss_pred CCC--CcCCccEEEeec--CccceecCCcccCCCCCCeeecccccccccccccc--cccccceEEEeecccccccCCCcc
Q 002892 106 KIG--NLTKLVHLNFAD--NNLRGEIPNEIGNLKNLADLVLALNNLIGPIPTTI--FNISTIIIINLVGNQLSGHRPSTM 179 (870)
Q Consensus 106 ~~~--~l~~L~~L~l~~--N~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~--~~l~~L~~L~l~~N~l~~~~~~~~ 179 (870)
.++ .+++|++|+|+. |...+.. . +. .+...+ ..+++|++|+|++|++.+..+..+
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~--~----------------~~-~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDG--D----------------MN-VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCS--C----------------GG-GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred HHHHccCCCCcEEEEeccccccccch--h----------------HH-HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 232 455666666542 1111000 0 00 000011 124455555555555543221111
Q ss_pred c--CCCCccceeeecccccccc----cCCcccCCCCccEEEccCCcccCCCcccccc-ccccccccccccc
Q 002892 180 G--HSLPNRQFLLLWANRLTGT----IPNSITNASKLIGLDLNSNSLSGQIPNTFGN-LRHLSTLNIRANY 243 (870)
Q Consensus 180 ~--~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~L~~N~ 243 (870)
. ..+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.|++.....+.. + ...++++.+.
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 1 1356677777777766653 3444456788999999999887544444443 2 3557888776
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=2.5e-10 Score=122.25 Aligned_cols=138 Identities=17% Similarity=0.256 Sum_probs=82.1
Q ss_pred cCCCCcCCccEEEeecCc-cceecCCcccCCCCCCeeeccccccccccccccc--ccccceEEEeec--ccccccC----
Q 002892 105 SKIGNLTKLVHLNFADNN-LRGEIPNEIGNLKNLADLVLALNNLIGPIPTTIF--NISTIIIINLVG--NQLSGHR---- 175 (870)
Q Consensus 105 ~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~--~l~~L~~L~l~~--N~l~~~~---- 175 (870)
..+..+++|+.|+|++|. +. ++. + .+++|++|++..|.+.......+. .+++|++|+|+. |...+..
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 334566778888887773 22 232 3 367888888887777654444444 577888888753 2221110
Q ss_pred --CCcccCCCCccceeeecccccccccCCccc---CCCCccEEEccCCcccCCCcc----cccccccccccccccccccc
Q 002892 176 --PSTMGHSLPNRQFLLLWANRLTGTIPNSIT---NASKLIGLDLNSNSLSGQIPN----TFGNLRHLSTLNIRANYLTT 246 (870)
Q Consensus 176 --~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~N~i~~~~~~----~~~~l~~L~~L~L~~N~l~~ 246 (870)
+......+|+|++|+|++|.+++..+..+. .+++|++|+|+.|.|++..+. .+..+++|+.|+|++|.|+.
T Consensus 242 l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 242 FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 111112467788888877777643332222 356777888877777654322 23456777777777777664
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=4.3e-09 Score=113.89 Aligned_cols=143 Identities=16% Similarity=0.205 Sum_probs=106.9
Q ss_pred CCCCeeccccceeEEEEEecCCcEEEEEEee--chh-hHHHHHHHHHHHHHHhcC--CCceeEEeeeeeeC---CeeEEE
Q 002892 588 NECNLLGAGSFGSVYKGTLFDGTNVAIKVFN--LQL-ERAFRSFESECEVLRNVR--HRNLIKIFSSCCNL---DFKALV 659 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~lv 659 (870)
...+.++.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..++|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 34678999999999999865 4688999876 332 122356788999999996 45578888888765 458999
Q ss_pred EecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 002892 660 LEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSH------------------------------------- 702 (870)
Q Consensus 660 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~------------------------------------- 702 (870)
|||++|.++.+.. ...++......++.+++++|+.||...
T Consensus 120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999998774321 122678888899999999999999631
Q ss_pred ------------------CCCcEecccCCCceeeCCCCc--eEEeccccccc
Q 002892 703 ------------------STPVVHCNLKPNNILLDKNMT--ARVSDFGISKL 734 (870)
Q Consensus 703 ------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~ 734 (870)
...++|||+++.||+++.++. +.++||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256899999999999987753 68999998864
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=1.6e-09 Score=114.25 Aligned_cols=188 Identities=14% Similarity=0.157 Sum_probs=123.3
Q ss_pred CCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCc--eeEEeeeeeeCC---eeEEEEec
Q 002892 589 ECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRN--LIKIFSSCCNLD---FKALVLEF 662 (870)
Q Consensus 589 ~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~ 662 (870)
.++.++.|....||+.. +.+++|+.... .....+.+|+++++.+. +.. +..++......+ ..|+||||
T Consensus 24 ~i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eeEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 35679999999999863 57999986543 34467889999998883 332 344554443332 45899999
Q ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 002892 663 MPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSH---------------------------------------- 702 (870)
Q Consensus 663 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---------------------------------------- 702 (870)
++|.++.+.... .++..+...++.++++.++.||...
T Consensus 98 i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 98 IKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred cCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 999988754331 2677788888899999999888511
Q ss_pred ---------------CCCcEecccCCCceeeCC--CCceEEeccccccccCCCCCccccccc---cc---------cccc
Q 002892 703 ---------------STPVVHCNLKPNNILLDK--NMTARVSDFGISKLLGEDDDSVTQTMT---MA---------TIGY 753 (870)
Q Consensus 703 ---------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~---~g---------~~~y 753 (870)
...++|||++|.||++++ .+.+.++||+.+..-............ .+ ..++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 135799999999999988 456789999988653211000000000 00 0011
Q ss_pred CC-cccccCCCcCcccchHhHHHHHHHHHhCCCCC
Q 002892 754 MA-PEYASDGIISPKCDVYSYGVLLMETFTRKKPT 787 (870)
Q Consensus 754 ~a-PE~~~~~~~~~~sDvwslG~il~elltg~~p~ 787 (870)
.. |+.... .....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 11 221110 112368999999999999998775
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=6e-09 Score=105.46 Aligned_cols=79 Identities=28% Similarity=0.371 Sum_probs=44.6
Q ss_pred CCccCCEEEccCCccCC--cccccccCCCCCCEEEcCCCcccCcccccccCCC--CCCeEecCCCcccCCCCc-------
Q 002892 406 NLKVLIYLNLSRNQLSG--NIPITIGGLKDLITLSLARNRFQDSIPDSFGSLT--SLEYLDLSNNNLSGEIPK------- 474 (870)
Q Consensus 406 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~------- 474 (870)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+..|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45566666666666665 2234455566666666666666543 2233333 666666666666654442
Q ss_pred chhhccccceee
Q 002892 475 SFEILSHLKRLN 486 (870)
Q Consensus 475 ~~~~l~~L~~L~ 486 (870)
.+..+|+|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 355666666654
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.56 E-value=1.3e-08 Score=98.27 Aligned_cols=91 Identities=14% Similarity=0.215 Sum_probs=45.2
Q ss_pred cccCccccceeecCCc-ccCCC----CCcccccccccceEecCCCccCCC----CcccccCCccCCEEEccCCccCCc--
Q 002892 355 CLSSLISLRQLHLGSN-QLTSS----IPSSFWSLEYILRIDLSSNSLSGS----LPSDIQNLKVLIYLNLSRNQLSGN-- 423 (870)
Q Consensus 355 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 423 (870)
.+...++|++|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3455667777777777 77532 222334445566666666665431 122333344555555555555432
Q ss_pred --ccccccCCCCCCEEEc--CCCccc
Q 002892 424 --IPITIGGLKDLITLSL--ARNRFQ 445 (870)
Q Consensus 424 --~p~~~~~l~~L~~L~L--s~N~l~ 445 (870)
+...+...+.|+.|+| ++|.|.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 1233333444444444 444444
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.56 E-value=6.9e-09 Score=100.16 Aligned_cols=118 Identities=12% Similarity=0.117 Sum_probs=93.3
Q ss_pred CCcccccccccceEecCCC-ccCCC----CcccccCCccCCEEEccCCccCCcc----cccccCCCCCCEEEcCCCcccC
Q 002892 376 IPSSFWSLEYILRIDLSSN-SLSGS----LPSDIQNLKVLIYLNLSRNQLSGNI----PITIGGLKDLITLSLARNRFQD 446 (870)
Q Consensus 376 ~~~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~ 446 (870)
+...+...+.|++|+|++| .+... +...+...++|++|+|++|+|+... ...+...+.|+.|+|++|.|.+
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445667889999999999 88742 3456677789999999999998533 3445566899999999999986
Q ss_pred c----ccccccCCCCCCeEec--CCCcccCC----CCcchhhccccceeeccCCccc
Q 002892 447 S----IPDSFGSLTSLEYLDL--SNNNLSGE----IPKSFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 447 ~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 493 (870)
. +...+...++|++|+| ++|.|... +...+...+.|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5 4567788899999999 88999853 3345556689999999999985
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.54 E-value=3.9e-07 Score=96.48 Aligned_cols=136 Identities=19% Similarity=0.206 Sum_probs=102.5
Q ss_pred CCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCC----CceeEEeeeeeeCCeeEEEEe
Q 002892 586 GFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRH----RNLIKIFSSCCNLDFKALVLE 661 (870)
Q Consensus 586 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e 661 (870)
.+...+.++.|....||+. ++.+++|+..... ....+..|+++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 6789999875432 23458899999888865 124455544 56789999
Q ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 002892 662 FMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHS-------------------------------------- 703 (870)
Q Consensus 662 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~-------------------------------------- 703 (870)
|++|.++.+... ..++..+...++.++++.++.||....
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999998864332 125677777888888888888884322
Q ss_pred ----------------------CCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 704 ----------------------TPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 704 ----------------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
..++|||++|.||+++.++.+.++||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998864
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.52 E-value=1.5e-08 Score=102.59 Aligned_cols=115 Identities=23% Similarity=0.221 Sum_probs=81.5
Q ss_pred CCCCCCCcc-cccCccccce--eecCCcccC---CCCCcccccccccceEecCCCccCC--CCcccccCCccCCEEEccC
Q 002892 346 NNLNGPIPT-CLSSLISLRQ--LHLGSNQLT---SSIPSSFWSLEYILRIDLSSNSLSG--SLPSDIQNLKVLIYLNLSR 417 (870)
Q Consensus 346 n~~~~~~p~-~~~~l~~L~~--L~Ls~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~ 417 (870)
|...+.++- .|...+.|+. ++++.|+.. ...+.....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++
T Consensus 126 n~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~ 205 (267)
T 3rw6_A 126 DGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSG 205 (267)
T ss_dssp ETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTT
T ss_pred chhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCC
Confidence 334443332 3555666766 778888544 2222233567889999999999987 3456777899999999999
Q ss_pred CccCCcccccccCCC--CCCEEEcCCCcccCccc-------ccccCCCCCCeEe
Q 002892 418 NQLSGNIPITIGGLK--DLITLSLARNRFQDSIP-------DSFGSLTSLEYLD 462 (870)
Q Consensus 418 N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p-------~~~~~l~~L~~L~ 462 (870)
|+|++. ..+..+. +|+.|+|++|.+.+..| ..+..+++|+.||
T Consensus 206 N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 206 NELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp SCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred CccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 999865 3344444 89999999999987655 2477889999887
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=2.3e-06 Score=89.72 Aligned_cols=136 Identities=12% Similarity=0.076 Sum_probs=96.5
Q ss_pred CCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCC---ceeEEeeeee-eCCeeEEEEecCCC
Q 002892 590 CNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHR---NLIKIFSSCC-NLDFKALVLEFMPN 665 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~ 665 (870)
++.++.|....||+. |+.+++|+... ......+..|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467888999999987 67899998542 23456789999999999642 3556666664 45567899999999
Q ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 002892 666 GSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS-------------------------------------------- 701 (870)
Q Consensus 666 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-------------------------------------------- 701 (870)
.++.+.... .++..+...++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888763221 134455555666666666666632
Q ss_pred -------------CCCCcEecccCCCceeeCC---CCce-EEeccccccc
Q 002892 702 -------------HSTPVVHCNLKPNNILLDK---NMTA-RVSDFGISKL 734 (870)
Q Consensus 702 -------------~~~~ivH~dlk~~Nill~~---~~~~-kl~Dfg~a~~ 734 (870)
....++|||+++.||+++. ++.+ .|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235699999999999987 4554 8999998763
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=3e-06 Score=87.42 Aligned_cols=135 Identities=17% Similarity=0.092 Sum_probs=100.1
Q ss_pred Ceeccccce-eEEEEEec-CCcEEEEEEeechhhHHHHHHHHHHHHHHhcC-CCceeEEeeeeeeCCeeEEEEecCCCCC
Q 002892 591 NLLGAGSFG-SVYKGTLF-DGTNVAIKVFNLQLERAFRSFESECEVLRNVR-HRNLIKIFSSCCNLDFKALVLEFMPNGS 667 (870)
Q Consensus 591 ~~lg~G~~g-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~g~ 667 (870)
+.+..|..+ .||+.... +++.+++|+.... ....+..|+..++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 456667766 58988754 5678999987644 3456788999998884 3347788888888899999999999998
Q ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------------
Q 002892 668 LEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHS---------------------------------------------- 701 (870)
Q Consensus 668 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---------------------------------------------- 701 (870)
+.+...... .....+..+++..++.||..
T Consensus 107 ~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 887654321 22345667777777777731
Q ss_pred ---------CCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 702 ---------HSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 702 ---------~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
....++|||+.+.||++++++.+-|+||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999987777899999776
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=1.9e-06 Score=89.15 Aligned_cols=77 Identities=16% Similarity=0.103 Sum_probs=60.9
Q ss_pred CCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCC---ceeEEeeeeeeCCeeEEEEecCC
Q 002892 588 NECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHR---NLIKIFSSCCNLDFKALVLEFMP 664 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~ 664 (870)
...+.++.|.++.||++...+|+.++||+...........+..|++.++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 346789999999999999888999999997543332335689999999999765 477777753 3689999999
Q ss_pred CCCH
Q 002892 665 NGSL 668 (870)
Q Consensus 665 ~g~L 668 (870)
|+++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9874
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=4.2e-06 Score=89.91 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=57.6
Q ss_pred CCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc--eeEEeeeeeeC-CeeEEEEecC
Q 002892 587 FNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN--LIKIFSSCCNL-DFKALVLEFM 663 (870)
Q Consensus 587 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~ 663 (870)
....+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34467799999999999875 5789999987543 24788888988886433 55667666554 6689999999
Q ss_pred CCCCHH
Q 002892 664 PNGSLE 669 (870)
Q Consensus 664 ~~g~L~ 669 (870)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.13 E-value=2e-06 Score=92.72 Aligned_cols=80 Identities=9% Similarity=-0.061 Sum_probs=55.9
Q ss_pred CCee-ccccceeEEEEEec-------CCcEEEEEEeechh---hHHHHHHHHHHHHHHhcC-C--CceeEEeeeeeeC--
Q 002892 590 CNLL-GAGSFGSVYKGTLF-------DGTNVAIKVFNLQL---ERAFRSFESECEVLRNVR-H--RNLIKIFSSCCNL-- 653 (870)
Q Consensus 590 ~~~l-g~G~~g~v~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~-- 653 (870)
.+.| +.|....+|+.... +++.+++|+..... ......+..|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88999999988754 26789999876533 101245678888888884 3 2466777776554
Q ss_pred -CeeEEEEecCCCCCHH
Q 002892 654 -DFKALVLEFMPNGSLE 669 (870)
Q Consensus 654 -~~~~lv~e~~~~g~L~ 669 (870)
+..++||||++|.++.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.00 E-value=6e-07 Score=83.91 Aligned_cols=85 Identities=8% Similarity=0.023 Sum_probs=62.0
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEcCCCc-cccCCCCCCCCC----CCCcEEeccCCc-cccccCcCCCCcC
Q 002892 38 LRRLKFLGFAYNDLTGSFPSWIGVFSKLQVLSLRNNS-FTGPIPNSLFNL----SSLVRLDSRFNS-ISGNIPSKIGNLT 111 (870)
Q Consensus 38 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l----~~L~~L~L~~n~-i~~~~~~~~~~l~ 111 (870)
-.+|+.||+++|.++..--..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. |+...-..+.+++
T Consensus 60 ~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 60 KYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred CceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 3468888888888876666667788888888888884 665433345553 368888888874 7754445677888
Q ss_pred CccEEEeecCc
Q 002892 112 KLVHLNFADNN 122 (870)
Q Consensus 112 ~L~~L~l~~N~ 122 (870)
+|++|+++++.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 99999998875
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.92 E-value=3.3e-06 Score=78.89 Aligned_cols=82 Identities=7% Similarity=0.097 Sum_probs=39.6
Q ss_pred CCcEEeccCCccccccCcCCCCcCCccEEEeecCc-cceecCCcccCC----CCCCeeeccccc-ccccccccccccccc
Q 002892 88 SLVRLDSRFNSISGNIPSKIGNLTKLVHLNFADNN-LRGEIPNEIGNL----KNLADLVLALNN-LIGPIPTTIFNISTI 161 (870)
Q Consensus 88 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~l~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~L 161 (870)
.|++|||+++.|+...-..+.++++|++|+|++|. |+...-..++.+ ++|++|+|++|. +++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443333334455555555555553 443322333332 245555555542 544444444555555
Q ss_pred eEEEeecc
Q 002892 162 IIINLVGN 169 (870)
Q Consensus 162 ~~L~l~~N 169 (870)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555555
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.88 E-value=6.3e-05 Score=80.37 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=80.0
Q ss_pred CCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCC--CceeEEee------eeeeCCeeEEEEe
Q 002892 590 CNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRH--RNLIKIFS------SCCNLDFKALVLE 661 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~------~~~~~~~~~lv~e 661 (870)
.+.++.|..+.||+....+| .+++|+..... ..+..|..+++.+.. -.+++++. +....+..+++||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566678899999986654 59999987532 223345555554431 12333332 1234567789999
Q ss_pred cCCCCCHH--------------HHHhhc--CC-----------CCCHHHH------------------------------
Q 002892 662 FMPNGSLE--------------KWLYSH--NY-----------FLDMLER------------------------------ 684 (870)
Q Consensus 662 ~~~~g~L~--------------~~l~~~--~~-----------~~~~~~~------------------------------ 684 (870)
|++|.++. ..++.. .. ...|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 111211 00 0122211
Q ss_pred -HHHHHHHHHHHHHHHh----------cCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 685 -LNIMIDVGLALEYLHH----------SHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 685 -~~i~~~i~~~l~~Lh~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
..+..++..++++|+. .....++|||+.+.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666653 125679999999999999888899999999765
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.88 E-value=3e-05 Score=84.78 Aligned_cols=75 Identities=16% Similarity=0.167 Sum_probs=49.5
Q ss_pred CCeeccccceeEEEEEec-CCcEEEEEEeechhh-------HHHHHHHHHHHHHHhcCC--C-ceeEEeeeeeeCCeeEE
Q 002892 590 CNLLGAGSFGSVYKGTLF-DGTNVAIKVFNLQLE-------RAFRSFESECEVLRNVRH--R-NLIKIFSSCCNLDFKAL 658 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~l 658 (870)
.+.+|.|..+.||++... +++.++||....... ....++..|+++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 568999999999999754 568899998653221 122456778888887732 3 34455543 3455689
Q ss_pred EEecCCCC
Q 002892 659 VLEFMPNG 666 (870)
Q Consensus 659 v~e~~~~g 666 (870)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.68 E-value=0.00027 Score=73.53 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=92.5
Q ss_pred CCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcC---CCceeEEeeeeeeCCeeEEEEecCC
Q 002892 588 NECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVR---HRNLIKIFSSCCNLDFKALVLEFMP 664 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~ 664 (870)
...+.++.|....+|+... +++.+++|+.... ....+..|++.++.+. ...+++++++....+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3456799999999999985 4778999987643 2456888999988884 3568888888887788999999999
Q ss_pred CCCHH--------H---HHhhcCC---------------------CCCHHHHHH---HHH----------------HHHH
Q 002892 665 NGSLE--------K---WLYSHNY---------------------FLDMLERLN---IMI----------------DVGL 693 (870)
Q Consensus 665 ~g~L~--------~---~l~~~~~---------------------~~~~~~~~~---i~~----------------~i~~ 693 (870)
+..+. + .++.... .-+|..... +.. +++.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87642 1 1222110 124543321 111 1111
Q ss_pred H-HHHHHh-cCCCCcEecccCCCceeeCCCCceEEeccc
Q 002892 694 A-LEYLHH-SHSTPVVHCNLKPNNILLDKNMTARVSDFG 730 (870)
Q Consensus 694 ~-l~~Lh~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 730 (870)
. ...|.. .....++|+|+.+.|++++.++ +.++|++
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 122321 1246799999999999999887 8899974
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00021 Score=74.06 Aligned_cols=79 Identities=16% Similarity=0.131 Sum_probs=58.1
Q ss_pred CCCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCC---ceeEEeeeeeeCCeeEEEEec
Q 002892 586 GFNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHR---NLIKIFSSCCNLDFKALVLEF 662 (870)
Q Consensus 586 ~~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~ 662 (870)
+..-++.+|.|..+.||+.+..||+.|++|+...........+..|++.++.+.-. -+++++++ +..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 44556789999999999999999999999987655433345678899999888421 24455543 234789999
Q ss_pred CCCCCH
Q 002892 663 MPNGSL 668 (870)
Q Consensus 663 ~~~g~L 668 (870)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987653
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.55 E-value=0.00011 Score=65.54 Aligned_cols=68 Identities=24% Similarity=0.356 Sum_probs=48.0
Q ss_pred EEEcCCCccc-CcccccccCCCCCCeEecCCCcccCCCCcchhhccccceeeccCCcccccCCCCCcccccc
Q 002892 436 TLSLARNRFQ-DSIPDSFGSLTSLEYLDLSNNNLSGEIPKSFEILSHLKRLNVSHNRLEGKIPTNGPFRNFL 506 (870)
Q Consensus 436 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~ 506 (870)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|+|.|.+-. ..|..|.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l-~~l~~wl 80 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL-VPLRAWL 80 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG-HHHHHHH
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc-HHHHHHH
Confidence 5677777775 23454332 3688888888888877777788888999999999999887763 2344443
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.53 E-value=0.00023 Score=78.15 Aligned_cols=78 Identities=10% Similarity=0.102 Sum_probs=49.0
Q ss_pred CCCcEecccCCCceeeCCCCceEEeccccccccCCCCCccccccccc--ccccCCcccccCC---CcCcccchHhHHHHH
Q 002892 703 STPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTMTMA--TIGYMAPEYASDG---IISPKCDVYSYGVLL 777 (870)
Q Consensus 703 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~sDvwslG~il 777 (870)
...++|||+++.||+++.++ ++++||+.+..-.. ......... ...|.+|+..... ......++......+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p---~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM---GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH---HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch---HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 56799999999999998876 99999998874321 111111111 1346666654321 122345666788888
Q ss_pred HHHHhCC
Q 002892 778 METFTRK 784 (870)
Q Consensus 778 ~elltg~ 784 (870)
|+.+++.
T Consensus 307 ~~~y~~~ 313 (420)
T 2pyw_A 307 WNLFNKR 313 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.47 E-value=3.4e-05 Score=73.54 Aligned_cols=63 Identities=19% Similarity=0.253 Sum_probs=30.3
Q ss_pred ccccceeecCCc-ccCCC----CCcccccccccceEecCCCccCCC----CcccccCCccCCEEEccCCccC
Q 002892 359 LISLRQLHLGSN-QLTSS----IPSSFWSLEYILRIDLSSNSLSGS----LPSDIQNLKVLIYLNLSRNQLS 421 (870)
Q Consensus 359 l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 421 (870)
-+.|++|+|++| +|... +.+.+..-+.|+.|+|++|+|... +.+.+..-+.|++|+|++|+|+
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 356777777764 66421 223333444555555555555421 2222333344555555555544
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.47 E-value=2.8e-05 Score=74.05 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=83.8
Q ss_pred cccccccceEecCCC-ccCC----CCcccccCCccCCEEEccCCccCCccccc----ccCCCCCCEEEcCCCcccCc---
Q 002892 380 FWSLEYILRIDLSSN-SLSG----SLPSDIQNLKVLIYLNLSRNQLSGNIPIT----IGGLKDLITLSLARNRFQDS--- 447 (870)
Q Consensus 380 ~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~~--- 447 (870)
...-+.|++|+|++| +|.. .+.+++..-+.|+.|+|++|+|....... +..-+.|+.|+|++|.|.+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344578999999986 7763 23456677789999999999998544333 44668999999999999865
Q ss_pred -ccccccCCCCCCeEecCCCcc---cC----CCCcchhhccccceeeccCCccc
Q 002892 448 -IPDSFGSLTSLEYLDLSNNNL---SG----EIPKSFEILSHLKRLNVSHNRLE 493 (870)
Q Consensus 448 -~p~~~~~l~~L~~L~L~~N~l---~~----~~p~~~~~l~~L~~L~ls~N~l~ 493 (870)
+..++..-+.|++|+|++|.. .. .+-..+..-+.|+.|+++.|...
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 334566678899999987643 32 13345666789999999988653
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.00039 Score=72.48 Aligned_cols=131 Identities=14% Similarity=0.180 Sum_probs=77.3
Q ss_pred CCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCce-eEEeeeeeeCCeeEEEEecC-C
Q 002892 587 FNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNL-IKIFSSCCNLDFKALVLEFM-P 664 (870)
Q Consensus 587 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~ 664 (870)
+.-.+.++.|....+|+. +.+++|+........ .....|+.+++.+...++ .+++++ ..+..++++||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 333788999999999998 679999886542221 223567777777643222 355543 334457899999 6
Q ss_pred CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHh--------------------------------------------
Q 002892 665 NGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHH-------------------------------------------- 700 (870)
Q Consensus 665 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~-------------------------------------------- 700 (870)
|.++....... ...++.++++.|+.+|.
T Consensus 92 g~~l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (301)
T 3dxq_A 92 AQTMSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVR 163 (301)
T ss_dssp CEECCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHH
T ss_pred CccCCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHH
Confidence 65443110000 00012222222222221
Q ss_pred ------cCCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 701 ------SHSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 701 ------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 164 ~~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 164 SALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 12345799999999999 5677889999998764
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.19 E-value=0.0016 Score=69.01 Aligned_cols=140 Identities=12% Similarity=0.071 Sum_probs=74.1
Q ss_pred CCeecccccee-EEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCC--CceeEEeeeeeeCCeeEEEEecCCCC
Q 002892 590 CNLLGAGSFGS-VYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRH--RNLIKIFSSCCNLDFKALVLEFMPNG 666 (870)
Q Consensus 590 ~~~lg~G~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e~~~~g 666 (870)
.+.++.|.... +|+....+|+.+++|....... ..+..|+++++.+.. -.+.+++.+.... .+++||++++.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 34566665554 6677654477888887654321 223456666666632 2345566653332 37899999877
Q ss_pred CHHHHHhhcC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHH--
Q 002892 667 SLEKWLYSHN-------------------------YFLDMLERL-------N-I------------MIDVGLALEYLH-- 699 (870)
Q Consensus 667 ~L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~l~~Lh-- 699 (870)
++.+++.... ..++..... . + ...+...++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 7765443110 001111110 0 0 001112222221
Q ss_pred -hcCCCCcEecccCCCceeeCCC----CceEEeccccccc
Q 002892 700 -HSHSTPVVHCNLKPNNILLDKN----MTARVSDFGISKL 734 (870)
Q Consensus 700 -~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~ 734 (870)
......++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1124579999999999999875 6899999998864
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.13 E-value=0.0016 Score=68.53 Aligned_cols=154 Identities=10% Similarity=0.089 Sum_probs=84.9
Q ss_pred hhHHHHhhcCCCC-----CCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc--eeEEeee
Q 002892 577 YLDIQQATDGFNE-----CNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN--LIKIFSS 649 (870)
Q Consensus 577 ~~~~~~~~~~~~~-----~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~ 649 (870)
..++......|.. .+.++.|....+|+....+| .+++|+..... ....+..|+.+++.+...+ +.+++..
T Consensus 9 ~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~ 85 (322)
T 2ppq_A 9 EDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPR 85 (322)
T ss_dssp HHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred HHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCC
Confidence 3444444444443 34577788899999986655 68899987531 1133456777776664222 2333321
Q ss_pred ------eeeCCeeEEEEecCCCCCHHH--------------HHhhc--C--CC----C---CHHHHHH------------
Q 002892 650 ------CCNLDFKALVLEFMPNGSLEK--------------WLYSH--N--YF----L---DMLERLN------------ 686 (870)
Q Consensus 650 ------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~--~--~~----~---~~~~~~~------------ 686 (870)
....+..+++|+|++|..+.. .++.. . .. . .|.....
T Consensus 86 ~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 165 (322)
T 2ppq_A 86 KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG 165 (322)
T ss_dssp TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred CCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhh
Confidence 122456789999999865310 11111 0 00 0 1222110
Q ss_pred HHHHHHHHHHHHHhc----CCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 687 IMIDVGLALEYLHHS----HSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 687 i~~~i~~~l~~Lh~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+...+...++.+++. ...+++|+|+.+.||++++++.+.++||+.+.
T Consensus 166 l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 166 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555532 23568999999999999887666899998775
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.04 E-value=0.00069 Score=72.47 Aligned_cols=139 Identities=13% Similarity=0.177 Sum_probs=82.3
Q ss_pred CCeeccccceeEEEEEec--------CCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc-eeEEeeeeeeCCeeEEEE
Q 002892 590 CNLLGAGSFGSVYKGTLF--------DGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN-LIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 660 (870)
++.+..|-...+|+.... +++.|++|+..... .......+|.++++.+...+ ..++++.+.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 467888889999999864 35789999974322 23355668999988884322 3556655432 3899
Q ss_pred ecCCCCCHHH--------------H---Hhhc----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 002892 661 EFMPNGSLEK--------------W---LYSH----NYFLD--MLERLNIMIDVGL-------------------ALEYL 698 (870)
Q Consensus 661 e~~~~g~L~~--------------~---l~~~----~~~~~--~~~~~~i~~~i~~-------------------~l~~L 698 (870)
||++|.++.. . ++.. +.... +.++.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865421 1 1111 11122 3455555544322 23333
Q ss_pred H----hc-CCCCcEecccCCCceeeCCC----CceEEecccccc
Q 002892 699 H----HS-HSTPVVHCNLKPNNILLDKN----MTARVSDFGISK 733 (870)
Q Consensus 699 h----~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~ 733 (870)
. .. ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 11 23468899999999999876 789999998775
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.02 E-value=0.0031 Score=66.50 Aligned_cols=140 Identities=11% Similarity=0.075 Sum_probs=81.1
Q ss_pred CeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc--eeEEeee-----eeeCCeeEEEEecC
Q 002892 591 NLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN--LIKIFSS-----CCNLDFKALVLEFM 663 (870)
Q Consensus 591 ~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~-----~~~~~~~~lv~e~~ 663 (870)
+.++ |....||+....+|+.+++|+...... ....+..|..+++.+.... +++++.. ....+..+.+|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 888899998777788899999864321 2245666777777774222 3444432 12245667899999
Q ss_pred CCCCHH-----H------H---Hhh--c------CCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 002892 664 PNGSLE-----K------W---LYS--H------NYFLDMLER----LNI---------------MIDVGLALEYLHHS- 701 (870)
Q Consensus 664 ~~g~L~-----~------~---l~~--~------~~~~~~~~~----~~i---------------~~~i~~~l~~Lh~~- 701 (870)
+|.++. . . ++. . ....++... ..+ ...+...++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 885431 1 1 111 0 011222111 001 11111223333221
Q ss_pred ---CCCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 702 ---HSTPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 702 ---~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
....++|||+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 245688999999999999 4 899999987753
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.95 E-value=0.00071 Score=74.16 Aligned_cols=72 Identities=14% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCeeccccceeEEEEEecC--------CcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCce-eEEeeeeeeCCeeEEEE
Q 002892 590 CNLLGAGSFGSVYKGTLFD--------GTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNL-IKIFSSCCNLDFKALVL 660 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~ 660 (870)
.+.|+.|....+|++...+ ++.+++|+...... ...+..|..+++.+...++ +++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4678899999999998653 57899999844211 1334568888888853333 556655432 3899
Q ss_pred ecCCCCC
Q 002892 661 EFMPNGS 667 (870)
Q Consensus 661 e~~~~g~ 667 (870)
||++|.+
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998744
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.86 E-value=0.0016 Score=57.94 Aligned_cols=37 Identities=24% Similarity=0.292 Sum_probs=21.0
Q ss_pred CCCEEEcCCCcccCcccccccCCCCCCeEecCCCccc
Q 002892 433 DLITLSLARNRFQDSIPDSFGSLTSLEYLDLSNNNLS 469 (870)
Q Consensus 433 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 469 (870)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555555555555556666666666554
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.76 E-value=0.016 Score=55.24 Aligned_cols=105 Identities=11% Similarity=0.029 Sum_probs=71.5
Q ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceeeCCCCceEEeccccccccCCCCCcccccc
Q 002892 667 SLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISKLLGEDDDSVTQTM 746 (870)
Q Consensus 667 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 746 (870)
+|.+.++..+.++++.++|.++.|.+.+|.-.-.. +.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 79999998888999999999999999998776211 1111333457899999999998864 1110
Q ss_pred cccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCc
Q 002892 747 TMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDE 789 (870)
Q Consensus 747 ~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~ 789 (870)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+.
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e 138 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE 138 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc
Confidence 0122466888763 3456788999999999999987766544
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.75 E-value=0.0017 Score=71.51 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=48.3
Q ss_pred CCeeccccceeEEEEEecC-CcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCce-eEEeeeeeeCCeeEEEEecCCCCC
Q 002892 590 CNLLGAGSFGSVYKGTLFD-GTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNL-IKIFSSCCNLDFKALVLEFMPNGS 667 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~g~ 667 (870)
++.|+.|-...+|+....+ ++.+++|+........ .....|..+++.+...++ .++++.+. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4678899999999998764 5789999885432211 112578888888864444 45666552 2 35999998754
Q ss_pred H
Q 002892 668 L 668 (870)
Q Consensus 668 L 668 (870)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.65 E-value=0.0013 Score=70.81 Aligned_cols=73 Identities=12% Similarity=0.205 Sum_probs=44.8
Q ss_pred CCeeccccceeEEEEEecC---------CcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc-eeEEeeeeeeCCeeEEE
Q 002892 590 CNLLGAGSFGSVYKGTLFD---------GTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN-LIKIFSSCCNLDFKALV 659 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv 659 (870)
.+.++.|....+|+....+ ++.+++|+........ .....|.++++.+...+ ..++++.. . .++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4568888889999998654 2689999886543221 22356788888775333 34555443 2 3789
Q ss_pred EecCCCCC
Q 002892 660 LEFMPNGS 667 (870)
Q Consensus 660 ~e~~~~g~ 667 (870)
|||++|.+
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.62 E-value=0.0079 Score=63.62 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=28.0
Q ss_pred CCCcEecccCCCceeeCCCCceEEeccccccc
Q 002892 703 STPVVHCNLKPNNILLDKNMTARVSDFGISKL 734 (870)
Q Consensus 703 ~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 734 (870)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35689999999999999888899999987764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.06 E-value=0.0086 Score=64.22 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=81.8
Q ss_pred CCeeccccceeEEEEEecC--------CcEEEEEEeechhhH---------HH---------HHHHHHHHHHHhcC-CCc
Q 002892 590 CNLLGAGSFGSVYKGTLFD--------GTNVAIKVFNLQLER---------AF---------RSFESECEVLRNVR-HRN 642 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~---------~~---------~~~~~e~~~l~~l~-h~n 642 (870)
++.+..|-...+|++...+ ++.|+++++-...+. .. .....|..+++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778888999998653 378999988554321 00 11234888888885 333
Q ss_pred eeEEeeeeeeCCeeEEEEecCCCCCHHH--------------H---HhhcC----CCCC--HHHHHHHHHHHH-------
Q 002892 643 LIKIFSSCCNLDFKALVLEFMPNGSLEK--------------W---LYSHN----YFLD--MLERLNIMIDVG------- 692 (870)
Q Consensus 643 iv~~~~~~~~~~~~~lv~e~~~~g~L~~--------------~---l~~~~----~~~~--~~~~~~i~~~i~------- 692 (870)
..++++++.. .+|+||++|-+|.. . ++... .... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 4566666532 28999999754421 1 11111 1122 223444443321
Q ss_pred ---------------HHHH----HHHhc-CCCCcEecccCCCceeeCCC------CceEEecccccc
Q 002892 693 ---------------LALE----YLHHS-HSTPVVHCNLKPNNILLDKN------MTARVSDFGISK 733 (870)
Q Consensus 693 ---------------~~l~----~Lh~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~a~ 733 (870)
..+. ++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23468899999999999876 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.70 E-value=0.0067 Score=65.76 Aligned_cols=74 Identities=14% Similarity=0.284 Sum_probs=48.7
Q ss_pred CCeeccccceeEEEEEecC--------CcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCc-eeEEeeeeeeCCeeEEEE
Q 002892 590 CNLLGAGSFGSVYKGTLFD--------GTNVAIKVFNLQLERAFRSFESECEVLRNVRHRN-LIKIFSSCCNLDFKALVL 660 (870)
Q Consensus 590 ~~~lg~G~~g~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 660 (870)
++.+..|-...+|+....+ ++.|++|+....... .....+|.++++.+...+ ..++++.+ . .+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 4568888889999998653 588999997544322 122356888888774322 34555432 2 37899
Q ss_pred ecCCCCCH
Q 002892 661 EFMPNGSL 668 (870)
Q Consensus 661 e~~~~g~L 668 (870)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.72 E-value=0.077 Score=57.39 Aligned_cols=29 Identities=28% Similarity=0.364 Sum_probs=24.5
Q ss_pred CcEecccCCCceee------CCCCceEEecccccc
Q 002892 705 PVVHCNLKPNNILL------DKNMTARVSDFGISK 733 (870)
Q Consensus 705 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~a~ 733 (870)
.++|+|+.+.||++ +++..++++||.+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 456779999998876
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.47 E-value=3.8 Score=39.04 Aligned_cols=121 Identities=13% Similarity=0.155 Sum_probs=79.4
Q ss_pred CCCceeEEeeeeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCceee
Q 002892 639 RHRNLIKIFSSCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALEYLHHSHSTPVVHCNLKPNNILL 718 (870)
Q Consensus 639 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~~~~ivH~dlk~~Nill 718 (870)
.||+++.. ..-.+.+...+.++.- ....+|-.- ...+...+++++..|+...++++ + -+|--+.|.|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~--~~~~~f~~i--k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIN--DNHTPFDNI--KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCC--TTSEEGGGG--GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcC--cccCCHHHH--HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEEE
Confidence 57888755 4445556555555543 333333221 22678899999999988776555 2 4788899999999
Q ss_pred CCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCccccc
Q 002892 719 DKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDEMFTG 793 (870)
Q Consensus 719 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~~~~~ 793 (870)
+.++.+++.-.|+-..+ +|. ..+...=.-.+=|++..+++++..|+....+
T Consensus 113 ~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp CTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred cCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 99999999887764322 221 1122223346778999999999998764443
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=67.77 E-value=13 Score=35.44 Aligned_cols=116 Identities=10% Similarity=0.054 Sum_probs=75.9
Q ss_pred CCCceeEEeeeeeeCCeeEEEEecCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEecccCCCcee
Q 002892 639 RHRNLIKIFSSCCNLDFKALVLEFMPNGSLEKWLYSHNYFLDMLERLNIMIDVGLALE-YLHHSHSTPVVHCNLKPNNIL 717 (870)
Q Consensus 639 ~h~niv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~Lh~~~~~~ivH~dlk~~Nil 717 (870)
.||++ -...-.+++...+.++.-+++.=...++. .+..++++++..|+...+ +++ .-+|--+.|.|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57877 33333566666666665433322233322 678899999998877655 443 3678889999999
Q ss_pred eCCCCceEEeccccccccCCCCCcccccccccccccCCcccccCCCcCcccchHhHHHHHHHHHhCCCCCCc
Q 002892 718 LDKNMTARVSDFGISKLLGEDDDSVTQTMTMATIGYMAPEYASDGIISPKCDVYSYGVLLMETFTRKKPTDE 789 (870)
Q Consensus 718 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~il~elltg~~p~~~ 789 (870)
++.++.+++.-.|+-..+ +|.-+ +...=.-.+=|++..++.++..|+.
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999888764322 23211 1122233667888999999888765
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.00 E-value=0.85 Score=50.00 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=17.3
Q ss_pred CCCCeeccccceeEEEEEecC-CcEEEE------EEeechh--hHHHHHHHHHHHHHHhcCCCceeEEeeee
Q 002892 588 NECNLLGAGSFGSVYKGTLFD-GTNVAI------KVFNLQL--ERAFRSFESECEVLRNVRHRNLIKIFSSC 650 (870)
Q Consensus 588 ~~~~~lg~G~~g~v~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 650 (870)
.+.+.+| ||.||+|.+.. ..+||+ |..+... .+....+.+|..+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 4556676 99999999764 367888 6554322 23335677888999999999999887765
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=59.33 E-value=18 Score=29.69 Aligned_cols=45 Identities=20% Similarity=0.164 Sum_probs=22.7
Q ss_pred cCCcccccccCCCCCCEEEcCCCcccCcccccccCCCCCCeEecCC
Q 002892 420 LSGNIPITIGGLKDLITLSLARNRFQDSIPDSFGSLTSLEYLDLSN 465 (870)
Q Consensus 420 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 465 (870)
++.+....|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445555555555555443 2334445555555555555543
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.75 E-value=25 Score=28.77 Aligned_cols=45 Identities=18% Similarity=0.055 Sum_probs=22.6
Q ss_pred cCCCCCcccccccccceEecCCCccCCCCcccccCCccCCEEEccC
Q 002892 372 LTSSIPSSFWSLEYILRIDLSSNSLSGSLPSDIQNLKVLIYLNLSR 417 (870)
Q Consensus 372 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 417 (870)
++.+...+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 44444555555555555555543 2224444555555555555543
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=53.73 E-value=17 Score=24.56 Aligned_cols=11 Identities=36% Similarity=0.377 Sum_probs=4.4
Q ss_pred HHHHHhhhhcc
Q 002892 558 ILIILCIRYRN 568 (870)
Q Consensus 558 ~~~~~~~~~~~ 568 (870)
+..++++++|+
T Consensus 29 ~~~~~~~RRr~ 39 (44)
T 2ks1_B 29 LGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHhhhhH
Confidence 33334444443
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=49.54 E-value=14 Score=24.87 Aligned_cols=10 Identities=10% Similarity=0.291 Sum_probs=4.0
Q ss_pred HHHhhhhccc
Q 002892 560 IILCIRYRNR 569 (870)
Q Consensus 560 ~~~~~~~~~~ 569 (870)
.++++++|++
T Consensus 30 ~~~~~RRRr~ 39 (44)
T 2l2t_A 30 FAVYVRRKSI 39 (44)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHhhhhhh
Confidence 3344444433
No 455
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=44.87 E-value=3.6e+02 Score=30.60 Aligned_cols=45 Identities=20% Similarity=0.133 Sum_probs=32.7
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 682 LERLNIMIDVG--LALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 682 ~~~~~i~~~i~--~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
..+..++..+| ..+.|+=. -||=.+.|||++.+|++.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 44555666555 34455541 35778999999999999999999875
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.35 E-value=5.2e+02 Score=28.71 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCcEecccCCCceeeCCCCceEEecccccc
Q 002892 681 MLERLNIMIDVG--LALEYLHHSHSTPVVHCNLKPNNILLDKNMTARVSDFGISK 733 (870)
Q Consensus 681 ~~~~~~i~~~i~--~~l~~Lh~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 733 (870)
+..+..++..+| ..+.|+=. -||=.+.|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILG-------igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILG-------VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeee-------ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 555666666655 34556542 34667899999999999999999875
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=25.98 E-value=1.1e+02 Score=31.25 Aligned_cols=139 Identities=17% Similarity=0.128 Sum_probs=70.6
Q ss_pred CCCCCeeccccceeEEEEEecCCcEEEEEEeechhhHHHHHHHHHHHHHHhcCCCceeEEeee-------------ee--
Q 002892 587 FNECNLLGAGSFGSVYKGTLFDGTNVAIKVFNLQLERAFRSFESECEVLRNVRHRNLIKIFSS-------------CC-- 651 (870)
Q Consensus 587 ~~~~~~lg~G~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~-------------~~-- 651 (870)
++.++....|..|.++.+. ++..|+||-.. ....+.+-.++...=.+.-|...-+.-. +.
T Consensus 71 v~~I~~s~~Gstgvff~~t--d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~ 145 (342)
T 1cja_A 71 FKGIERSEKGTEGLFFVET--ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKS 145 (342)
T ss_dssp EEEEEECCSTTSCEEEEEE--SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSS
T ss_pred eeEEEeccCCCCCeEEEEe--CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhh
Confidence 3334455666655555444 57899999442 2222334444444444555554332211 00
Q ss_pred -------eCCeeEEEEecCCCCCHHHHHhhc-CCCCCHHHHHHHHHHH--HHHHHHHHhcCCC-CcEe-cccCCCceeeC
Q 002892 652 -------NLDFKALVLEFMPNGSLEKWLYSH-NYFLDMLERLNIMIDV--GLALEYLHHSHST-PVVH-CNLKPNNILLD 719 (870)
Q Consensus 652 -------~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i--~~~l~~Lh~~~~~-~ivH-~dlk~~Nill~ 719 (870)
......++|||.+|..|.+.-... ...+... .+.++ +-+++.+.....+ +.+. .-=.+.||+++
T Consensus 146 ~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~ 221 (342)
T 1cja_A 146 FRVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLS 221 (342)
T ss_dssp SCHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEE
T ss_pred hHHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEe
Confidence 112345999999876654321110 0002222 23332 2345555544332 2221 12468899997
Q ss_pred CCCc-eEEeccccccc
Q 002892 720 KNMT-ARVSDFGISKL 734 (870)
Q Consensus 720 ~~~~-~kl~Dfg~a~~ 734 (870)
+++. +.++|.+.++.
T Consensus 222 ~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 222 ERGATVVPIDSKIIPL 237 (342)
T ss_dssp SBTTCEEECSCCCCCC
T ss_pred CCCCeEEEEcCCcccc
Confidence 7654 88999998874
Done!