Query 002895
Match_columns 869
No_of_seqs 381 out of 1510
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 05:44:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bo5_A Histone-lysine N-methyl 100.0 1.1E-40 3.6E-45 357.0 17.5 192 654-855 56-286 (290)
2 3ooi_A Histone-lysine N-methyl 100.0 9.2E-41 3.1E-45 347.0 16.1 174 638-852 51-229 (232)
3 3ope_A Probable histone-lysine 100.0 9.8E-40 3.4E-44 336.9 17.2 160 676-852 46-211 (222)
4 3h6l_A Histone-lysine N-methyl 100.0 1.7E-38 5.7E-43 338.4 15.2 163 671-851 86-253 (278)
5 1mvh_A Cryptic LOCI regulator 100.0 1.7E-37 5.8E-42 333.6 16.7 146 707-852 124-295 (299)
6 3hna_A Histone-lysine N-methyl 100.0 2.5E-37 8.6E-42 330.6 13.7 180 656-852 79-286 (287)
7 1ml9_A Histone H3 methyltransf 100.0 1.5E-36 5.3E-41 326.2 13.9 146 707-852 120-299 (302)
8 2r3a_A Histone-lysine N-methyl 100.0 1.1E-35 3.7E-40 319.7 14.7 146 707-852 127-297 (300)
9 2w5y_A Histone-lysine N-methyl 100.0 1.2E-33 4E-38 286.5 12.4 145 708-852 40-189 (192)
10 3f9x_A Histone-lysine N-methyl 100.0 5.9E-32 2E-36 265.3 13.5 131 709-839 19-155 (166)
11 2f69_A Histone-lysine N-methyl 99.9 9.1E-28 3.1E-32 253.7 13.3 117 719-839 108-235 (261)
12 1h3i_A Histone H3 lysine 4 spe 99.9 7.6E-26 2.6E-30 241.1 12.1 117 719-839 162-289 (293)
13 1n3j_A A612L, histone H3 lysin 99.9 2.6E-26 8.9E-31 214.9 6.4 107 719-838 3-109 (119)
14 2qpw_A PR domain zinc finger p 99.9 1.2E-25 4.1E-30 219.7 8.8 117 708-838 18-145 (149)
15 3s8p_A Histone-lysine N-methyl 99.9 2.8E-23 9.7E-28 220.4 2.7 127 721-852 132-266 (273)
16 3rq4_A Histone-lysine N-methyl 99.8 1.8E-20 6.3E-25 196.7 7.6 121 721-847 104-232 (247)
17 3ep0_A PR domain zinc finger p 99.8 2.8E-19 9.6E-24 178.3 9.1 111 718-838 25-147 (170)
18 3db5_A PR domain zinc finger p 99.7 2.9E-18 1E-22 167.7 10.7 124 706-838 10-143 (151)
19 3dal_A PR domain zinc finger p 99.7 1.8E-18 6.1E-23 176.0 7.0 109 717-835 55-174 (196)
20 3ray_A PR domain-containing pr 99.6 3.4E-15 1.2E-19 155.5 8.1 105 717-835 69-183 (237)
21 3ihx_A PR domain zinc finger p 99.5 8E-15 2.7E-19 143.8 5.5 102 719-836 22-140 (152)
22 3qwp_A SET and MYND domain-con 98.2 6.9E-07 2.4E-11 100.0 4.5 44 790-837 200-243 (429)
23 3n71_A Histone lysine methyltr 98.2 9.2E-07 3.1E-11 100.8 4.7 44 791-836 200-254 (490)
24 3qww_A SET and MYND domain-con 98.0 2.6E-06 8.8E-11 95.8 4.2 42 791-836 201-242 (433)
25 2llk_A Cyclin-D-binding MYB-li 96.4 0.0022 7.6E-08 55.8 3.7 51 169-222 18-68 (73)
26 3qxy_A N-lysine methyltransfer 96.1 0.0032 1.1E-07 71.1 4.1 42 791-836 222-263 (449)
27 2h21_A Ribulose-1,5 bisphospha 96.0 0.0034 1.2E-07 70.2 3.6 45 792-836 190-241 (440)
28 2cqr_A RSGI RUH-043, DNAJ homo 95.6 0.013 4.4E-07 51.0 5.2 53 170-222 14-68 (73)
29 2yqk_A Arginine-glutamic acid 95.1 0.03 1E-06 47.1 5.7 44 497-541 9-52 (63)
30 2lr8_A CAsp8-associated protei 94.0 0.004 1.4E-07 53.5 0.0 47 176-222 16-62 (70)
31 2eqr_A N-COR1, N-COR, nuclear 94.6 0.045 1.5E-06 45.6 5.4 43 497-541 12-54 (61)
32 3smt_A Histone-lysine N-methyl 94.5 0.02 6.9E-07 65.5 4.0 41 792-835 273-313 (497)
33 2crg_A Metastasis associated p 94.5 0.05 1.7E-06 46.7 5.4 44 497-541 8-51 (70)
34 2cu7_A KIAA1915 protein; nucle 94.4 0.055 1.9E-06 46.3 5.6 53 170-225 5-58 (72)
35 2yum_A ZZZ3 protein, zinc fing 94.0 0.049 1.7E-06 46.7 4.4 53 170-222 4-61 (75)
36 2din_A Cell division cycle 5-l 93.8 0.049 1.7E-06 45.7 4.0 52 169-223 4-55 (66)
37 1x41_A Transcriptional adaptor 93.6 0.048 1.6E-06 45.1 3.6 48 173-222 7-55 (60)
38 3sjm_A Telomeric repeat-bindin 93.4 0.055 1.9E-06 45.6 3.5 49 173-223 10-61 (64)
39 2d9a_A B-MYB, MYB-related prot 93.2 0.055 1.9E-06 44.5 3.3 51 170-222 4-55 (60)
40 1guu_A C-MYB, MYB proto-oncoge 93.2 0.067 2.3E-06 42.7 3.6 46 174-221 3-49 (52)
41 2elk_A SPCC24B10.08C protein; 93.0 0.07 2.4E-06 43.9 3.6 45 174-220 9-55 (58)
42 2cjj_A Radialis; plant develop 92.4 0.092 3.1E-06 47.6 3.8 50 174-223 8-59 (93)
43 2cqq_A RSGI RUH-037, DNAJ homo 92.3 0.096 3.3E-06 45.3 3.7 50 174-223 8-58 (72)
44 2iw5_B Protein corest, REST co 92.3 0.13 4.3E-06 53.6 5.1 44 497-542 133-176 (235)
45 1ug2_A 2610100B20RIK gene prod 91.8 0.093 3.2E-06 47.5 3.1 47 176-222 35-82 (95)
46 1w0t_A Telomeric repeat bindin 91.4 0.14 4.9E-06 41.1 3.5 47 174-222 2-51 (53)
47 2k9n_A MYB24; R2R3 domain, DNA 91.0 0.22 7.7E-06 45.4 4.8 48 173-223 52-100 (107)
48 3osg_A MYB21; transcription-DN 90.8 0.17 5.9E-06 47.5 4.0 51 170-223 58-109 (126)
49 4a69_C Nuclear receptor corepr 90.6 0.3 1E-05 44.2 5.3 44 497-542 43-86 (94)
50 1gvd_A MYB proto-oncogene prot 90.6 0.14 4.7E-06 40.9 2.7 46 174-221 3-49 (52)
51 1gv2_A C-MYB, MYB proto-oncoge 90.2 0.19 6.7E-06 45.4 3.7 51 170-223 52-103 (105)
52 2yus_A SWI/SNF-related matrix- 89.3 0.13 4.4E-06 45.2 1.7 47 173-222 17-64 (79)
53 2yus_A SWI/SNF-related matrix- 88.0 0.81 2.8E-05 40.1 5.9 43 497-541 18-60 (79)
54 2cu7_A KIAA1915 protein; nucle 88.0 0.91 3.1E-05 38.6 6.1 41 497-539 9-49 (72)
55 1x41_A Transcriptional adaptor 87.8 0.88 3E-05 37.4 5.7 40 497-538 8-48 (60)
56 2dim_A Cell division cycle 5-l 87.7 0.35 1.2E-05 40.9 3.3 48 173-222 8-56 (70)
57 1ity_A TRF1; helix-turn-helix, 87.2 0.39 1.3E-05 40.5 3.3 51 171-223 7-60 (69)
58 2ltp_A Nuclear receptor corepr 87.0 0.12 4E-06 46.2 0.0 51 170-223 12-63 (89)
59 1h8a_C AMV V-MYB, MYB transfor 87.0 0.34 1.2E-05 45.4 3.1 50 171-223 76-126 (128)
60 2elk_A SPCC24B10.08C protein; 85.7 1.1 3.9E-05 36.6 5.2 40 497-538 9-50 (58)
61 2yum_A ZZZ3 protein, zinc fing 85.6 1.1 3.7E-05 38.3 5.3 40 497-538 8-53 (75)
62 2k9n_A MYB24; R2R3 domain, DNA 84.6 0.59 2E-05 42.5 3.4 46 174-221 1-47 (107)
63 2xag_B REST corepressor 1; ami 84.1 0.97 3.3E-05 51.7 5.5 44 497-542 380-423 (482)
64 3zqc_A MYB3; transcription-DNA 83.8 0.98 3.4E-05 42.6 4.6 51 171-224 51-102 (131)
65 1gv2_A C-MYB, MYB proto-oncoge 83.7 0.54 1.9E-05 42.4 2.7 46 174-221 4-50 (105)
66 1guu_A C-MYB, MYB proto-oncoge 83.7 1.6 5.6E-05 34.5 5.2 39 497-537 3-42 (52)
67 1h89_C C-MYB, MYB proto-oncoge 81.8 0.76 2.6E-05 44.5 3.1 51 170-223 106-157 (159)
68 2d9a_A B-MYB, MYB-related prot 81.1 2.5 8.7E-05 34.4 5.5 40 497-538 8-48 (60)
69 1h8a_C AMV V-MYB, MYB transfor 80.5 1.2 4E-05 41.7 3.8 52 169-222 22-74 (128)
70 3osg_A MYB21; transcription-DN 80.3 0.93 3.2E-05 42.5 3.0 47 172-221 9-56 (126)
71 1ign_A Protein (RAP1); RAP1,ye 79.2 0.85 2.9E-05 47.9 2.5 52 173-224 7-62 (246)
72 2cqr_A RSGI RUH-043, DNAJ homo 78.9 3.1 0.00011 36.0 5.6 42 495-538 16-61 (73)
73 1gvd_A MYB proto-oncogene prot 77.8 2.9 9.9E-05 33.1 4.7 40 497-538 3-43 (52)
74 2dim_A Cell division cycle 5-l 76.1 4.4 0.00015 34.0 5.7 40 497-538 9-49 (70)
75 2ltp_A Nuclear receptor corepr 76.8 0.61 2.1E-05 41.6 0.0 43 496-540 15-57 (89)
76 1w0t_A Telomeric repeat bindin 74.6 3.4 0.00012 32.9 4.4 29 498-526 3-32 (53)
77 1wgx_A KIAA1903 protein; MYB D 74.5 1.4 4.7E-05 38.4 2.1 47 176-222 10-58 (73)
78 3sjm_A Telomeric repeat-bindin 72.9 5.8 0.0002 33.2 5.6 45 497-541 11-59 (64)
79 1ity_A TRF1; helix-turn-helix, 72.8 3.7 0.00013 34.5 4.4 45 497-541 10-58 (69)
80 2llk_A Cyclin-D-binding MYB-li 72.0 2.7 9.1E-05 36.4 3.4 40 496-538 22-61 (73)
81 2din_A Cell division cycle 5-l 71.6 4.6 0.00016 33.5 4.7 39 496-537 8-46 (66)
82 3h6l_A Histone-lysine N-methyl 71.6 1.8 6.1E-05 46.1 2.7 37 616-657 63-110 (278)
83 1x58_A Hypothetical protein 49 70.4 3 0.0001 35.2 3.2 49 173-223 7-58 (62)
84 1h89_C C-MYB, MYB proto-oncoge 68.2 3.3 0.00011 40.1 3.5 49 172-222 56-105 (159)
85 2eqr_A N-COR1, N-COR, nuclear 65.0 5.1 0.00017 33.1 3.5 48 172-222 10-58 (61)
86 3qww_A SET and MYND domain-con 64.1 5.1 0.00017 44.8 4.5 30 720-749 7-36 (433)
87 3n71_A Histone lysine methyltr 61.7 5.8 0.0002 45.1 4.4 32 719-750 6-37 (490)
88 2ckx_A NGTRF1, telomere bindin 61.7 5 0.00017 35.5 3.1 46 176-223 2-52 (83)
89 2cjj_A Radialis; plant develop 60.5 12 0.00042 33.7 5.5 42 497-540 8-53 (93)
90 2y9y_A Imitation switch protei 60.1 6.2 0.00021 43.8 4.2 48 174-221 228-289 (374)
91 2aje_A Telomere repeat-binding 59.8 9.2 0.00032 35.3 4.6 49 173-223 12-65 (105)
92 3qwp_A SET and MYND domain-con 58.5 7.5 0.00026 43.2 4.6 30 719-748 4-33 (429)
93 2juh_A Telomere binding protei 55.8 8.1 0.00028 36.6 3.6 50 172-223 15-69 (121)
94 2xus_A Breast cancer metastasi 55.1 8.5 0.00029 31.2 3.0 31 22-52 13-43 (49)
95 2roh_A RTBP1, telomere binding 52.6 9.4 0.00032 36.2 3.4 51 173-223 30-83 (122)
96 1ofc_X ISWI protein; nuclear p 52.5 11 0.00039 40.7 4.5 49 173-221 211-273 (304)
97 2l9z_A PR domain zinc finger p 52.4 5.5 0.00019 30.8 1.5 21 251-271 6-29 (39)
98 3hm5_A DNA methyltransferase 1 51.1 13 0.00045 33.7 4.0 46 175-223 31-82 (93)
99 2lua_A Protein MALE-specific l 50.7 7.2 0.00024 31.9 2.0 26 658-683 5-37 (52)
100 1mvh_A Cryptic LOCI regulator 49.7 8.5 0.00029 41.2 3.0 37 617-658 67-131 (299)
101 2xag_B REST corepressor 1; ami 49.1 3.6 0.00012 47.1 0.0 43 497-541 189-231 (482)
102 1x58_A Hypothetical protein 49 44.1 18 0.00061 30.6 3.5 40 497-536 8-48 (62)
103 3hna_A Histone-lysine N-methyl 40.7 10 0.00035 40.4 2.0 39 614-657 78-140 (287)
104 3smt_A Histone-lysine N-methyl 39.3 22 0.00076 40.6 4.5 32 721-752 94-125 (497)
105 1wgx_A KIAA1903 protein; MYB D 38.9 51 0.0017 28.6 5.6 44 496-541 7-54 (73)
106 2cqq_A RSGI RUH-037, DNAJ homo 35.9 70 0.0024 27.4 6.0 43 497-542 8-54 (72)
107 3zqc_A MYB3; transcription-DNA 35.6 34 0.0012 31.9 4.5 42 497-540 54-95 (131)
108 2iw5_B Protein corest, REST co 34.4 27 0.00091 36.5 3.7 47 174-223 133-180 (235)
109 1fex_A TRF2-interacting telome 32.7 33 0.0011 28.3 3.3 45 175-219 3-55 (59)
110 1pft_A TFIIB, PFTFIIBN; N-term 31.6 45 0.0015 26.1 3.8 34 144-178 12-49 (50)
111 2ckx_A NGTRF1, telomere bindin 31.3 49 0.0017 29.1 4.4 37 499-536 2-42 (83)
112 3qxy_A N-lysine methyltransfer 29.9 39 0.0013 37.9 4.5 34 720-753 38-72 (449)
113 3bo5_A Histone-lysine N-methyl 29.1 32 0.0011 36.7 3.3 22 615-636 58-81 (290)
114 3lcn_C MRNA transport factor G 27.2 79 0.0027 22.8 3.9 21 28-48 5-25 (29)
115 2juh_A Telomere binding protei 22.7 99 0.0034 29.2 5.1 31 496-526 16-47 (121)
116 1ofc_X ISWI protein; nuclear p 22.6 60 0.0021 35.1 4.0 44 497-542 110-154 (304)
117 3ope_A Probable histone-lysine 22.5 31 0.0011 35.1 1.7 38 614-656 20-65 (222)
118 1ml9_A Histone H3 methyltransf 22.3 33 0.0011 36.5 2.0 18 617-634 48-68 (302)
119 2roh_A RTBP1, telomere binding 21.5 62 0.0021 30.6 3.4 40 497-536 31-73 (122)
No 1
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=357.04 Aligned_cols=192 Identities=24% Similarity=0.488 Sum_probs=169.6
Q ss_pred hhccCCcccCCCCccCCCcccccccCccCcccCc--------------CccCCCCCCCCCCCCCCCCCCCCchHHhhccc
Q 002895 654 KNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCR--------------NCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQ 719 (869)
Q Consensus 654 ~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~--------------~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg~~ 719 (869)
.++|+||.|..+.|.+..|+|++.+.+|+++.|. +|+..|++ ...|.|+.+|++..
T Consensus 56 ~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C----------~~~C~Nr~~q~g~~ 125 (290)
T 3bo5_A 56 QITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRC----------SDHCRNRVVQKGLQ 125 (290)
T ss_dssp SCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCS----------CTTCTTCCGGGCCC
T ss_pred cccCCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCC----------CCCCCCeEcccCCc
Confidence 4678999998889999999999999999998875 45555544 36999999999999
Q ss_pred CcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCC--------cEEEeccccCCc
Q 002895 720 QRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND--------QYVLDAYRKGDK 791 (869)
Q Consensus 720 k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~--------~~~IDAtr~GN~ 791 (869)
.+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+....+|+|.+.. +++|||+.+||+
T Consensus 126 ~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~ 205 (290)
T 3bo5_A 126 FHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNI 205 (290)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----EEEEEEEEEEECG
T ss_pred ccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCccceeEEeeeecCCc
Confidence 999999999999999999999999999999999999999999988887777889997753 378999999999
Q ss_pred cccccCCCCCCcceeEEEECC-eeEEEEEEecCCCCCCeEEEecCCCC----------------CCCCcccCCCCCCCCC
Q 002895 792 LKFANHSSNPNCFAKVMLVAG-DHRVGIFAKEHIEASEELFYDYRYGP----------------DQAPAWARKPEGSKRE 854 (869)
Q Consensus 792 aRFINHSC~PNc~~~~v~v~G-~~RI~ifA~RDI~aGEELTfDYgy~~----------------d~~pcwC~~p~~~k~d 854 (869)
+|||||||+|||.++.|.+++ .++|+|||+|||++||||||||++.. ...+|+||.++|++.-
T Consensus 206 arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l 285 (290)
T 3bo5_A 206 GRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFL 285 (290)
T ss_dssp GGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBC
T ss_pred hheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCccC
Confidence 999999999999998888876 58999999999999999999998542 2468999999998654
Q ss_pred C
Q 002895 855 D 855 (869)
Q Consensus 855 e 855 (869)
.
T Consensus 286 ~ 286 (290)
T 3bo5_A 286 P 286 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 2
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=9.2e-41 Score=346.99 Aligned_cols=174 Identities=32% Similarity=0.566 Sum_probs=155.7
Q ss_pred ccCCCccccccCchhhhhccCCcccCCCCccCCCcccccccCccCcccCcCccCCCCCCCCCCCCCCCCCCCCchHHhhc
Q 002895 638 CEKYCGYSFLRCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLR 717 (869)
Q Consensus 638 Cek~Cg~~~~~C~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg 717 (869)
++..|+ |+.+|.||+. .+||+|..|. |+ ..|+|+.+|++
T Consensus 51 ~~~~C~-----~~~~C~nr~~-------------------~~EC~~~~C~-c~----------------~~C~Nr~~q~~ 89 (232)
T 3ooi_A 51 DENPCG-----IDSECINRML-------------------LYECHPTVCP-AG----------------GRCQNQCFSKR 89 (232)
T ss_dssp SSSTTC-----TTSCCHHHHT-------------------TBCCCTTTCT-TG----------------GGCCCCHHHHT
T ss_pred CCCCCC-----CCCCCcCcCc-------------------eeEeCCCCCC-CC----------------CCcCCccccCC
Confidence 356788 8888888865 7888887775 32 48999999999
Q ss_pred ccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhccc--CCcccccCCCcEEEeccccCCccccc
Q 002895 718 QQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDAYRKGDKLKFA 795 (869)
Q Consensus 718 ~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~--~~sYlf~L~~~~~IDAtr~GN~aRFI 795 (869)
...+++|++++.+||||||+++|++|+||+||+||||+..++++|...+... ...|+|.++.+++|||+.+||++|||
T Consensus 90 ~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfi 169 (232)
T 3ooi_A 90 QYPEVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFM 169 (232)
T ss_dssp CCCCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGC
T ss_pred CCccEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccc
Confidence 9999999999999999999999999999999999999999999997765543 45788999999999999999999999
Q ss_pred cCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC---CCCCcccCCCCCCC
Q 002895 796 NHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 852 (869)
Q Consensus 796 NHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~---d~~pcwC~~p~~~k 852 (869)
||||+|||.++.|.+++..+|+|||+|||++||||||||++.. ...+|+|+.++|++
T Consensus 170 NHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG 229 (232)
T 3ooi_A 170 NHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSG 229 (232)
T ss_dssp EECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCS
T ss_pred cccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcC
Confidence 9999999999999999999999999999999999999998654 45789999999874
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=9.8e-40 Score=336.94 Aligned_cols=160 Identities=29% Similarity=0.538 Sum_probs=143.4
Q ss_pred cccCccCcccCcCccCCCCCCCCCCCCCCCCCCCCchHHhhcccC-cEEEEEcCCCCcEEEEccccCCCCeeEEeccccc
Q 002895 676 AAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQ-RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELI 754 (869)
Q Consensus 676 ~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg~~k-~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEII 754 (869)
+...||+|+.|. |+ ..|.|+.+|++... +|+|++++.+||||||+++|++|+||+||+||||
T Consensus 46 ~~~~EC~~~~C~-C~----------------~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi 108 (222)
T 3ope_A 46 MIFAECSPNTCP-CG----------------EQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVV 108 (222)
T ss_dssp GGTBCCCTTTCT-TT----------------TSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEE
T ss_pred CeEeEeCCCCCc-CC----------------CCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceec
Confidence 447899988776 32 48999999998765 5999999999999999999999999999999999
Q ss_pred CHHHHHHhhh-hhcccCCcccccCCCcEEEeccccCCccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEe
Q 002895 755 SHREADKRGK-IYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYD 833 (869)
Q Consensus 755 s~~Ea~rR~k-~yd~~~~sYlf~L~~~~~IDAtr~GN~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfD 833 (869)
+..++.+|.. .|.....+|+|.++.+++|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++|||||||
T Consensus 109 ~~~e~~~r~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~d 188 (222)
T 3ope_A 109 SEQEFRNRMIEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYD 188 (222)
T ss_dssp CHHHHHHHHHHTSTTCCSCCEEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEEC
T ss_pred CHHHHHHHHHHHhcccCCeEEEecCCCEEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEE
Confidence 9999988853 455556789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC----CCCCcccCCCCCCC
Q 002895 834 YRYGP----DQAPAWARKPEGSK 852 (869)
Q Consensus 834 Ygy~~----d~~pcwC~~p~~~k 852 (869)
|++.. ...+|.|+.++|++
T Consensus 189 Y~~~~~~~~~~~~C~CGs~~Crg 211 (222)
T 3ope_A 189 YNFHSFNVEKQQLCKCGFEKCRG 211 (222)
T ss_dssp TTSSBCCCSCCCBCCCCCTTCCS
T ss_pred CCCcccCCcCCCEeeCCCcCCCC
Confidence 99753 24789999999984
No 4
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=1.7e-38 Score=338.36 Aligned_cols=163 Identities=27% Similarity=0.522 Sum_probs=146.7
Q ss_pred CcccccccCccCcccCcCccCCCCCCCCCCCCCCCCCCCCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEec
Q 002895 671 QCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYT 750 (869)
Q Consensus 671 ~CpC~~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~ 750 (869)
.|.|....+||++ .|. |+ ..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+
T Consensus 86 ~C~nr~~~~EC~~-~C~-C~----------------~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~ 147 (278)
T 3h6l_A 86 DCLNRLLMIECSS-RCP-NG----------------DYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYC 147 (278)
T ss_dssp TCTTGGGTBCCCT-TCT-TG----------------GGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECC
T ss_pred CCCCcceEeccCC-CCC-cC----------------CCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEee
Confidence 3666667899985 465 32 48999999999999999999999999999999999999999999
Q ss_pred ccccCHHHHHHhhhhhccc--CCcccccCCCcEEEeccccCCccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCC
Q 002895 751 GELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASE 828 (869)
Q Consensus 751 GEIIs~~Ea~rR~k~yd~~--~~sYlf~L~~~~~IDAtr~GN~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGE 828 (869)
||||+..++++|...|... .+.|+|.++.+++|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++||
T Consensus 148 Gevi~~~e~~~R~~~y~~~~~~~~y~~~l~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GE 227 (278)
T 3h6l_A 148 GEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGS 227 (278)
T ss_dssp CEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTC
T ss_pred eeecCHHHHHHHHHHHHhccCccceeecccCCeEEeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCC
Confidence 9999999999998888654 35677789999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCC---CCCCcccCCCCCC
Q 002895 829 ELFYDYRYGP---DQAPAWARKPEGS 851 (869)
Q Consensus 829 ELTfDYgy~~---d~~pcwC~~p~~~ 851 (869)
||||||++.. ...+|+|+.++|+
T Consensus 228 ELT~dY~~~~~~~~~~~C~CGs~~Cr 253 (278)
T 3h6l_A 228 ELTFDYQFQRYGKEAQKCFCGSANCR 253 (278)
T ss_dssp BCEECCTTTEECSSCEECCCCCTTCC
T ss_pred EEEEecCCCcCCCCCcEeECCCCCCe
Confidence 9999999753 4578999999987
No 5
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=1.7e-37 Score=333.55 Aligned_cols=146 Identities=28% Similarity=0.410 Sum_probs=122.7
Q ss_pred CCCCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCC-----cE
Q 002895 707 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND-----QY 781 (869)
Q Consensus 707 ~~C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~-----~~ 781 (869)
..|.|+.+|++...+++|++++.+||||||+++|++|+||+||+||||+..|+++|...|+..+.+|+|.++. .+
T Consensus 124 ~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~ 203 (299)
T 1mvh_A 124 MECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEY 203 (299)
T ss_dssp TTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCE
T ss_pred CCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccE
Confidence 5899999999999999999999999999999999999999999999999999999999998888899998874 58
Q ss_pred EEeccccCCccccccCCCCCCcceeEEEEC----CeeEEEEEEecCCCCCCeEEEecCCCCC-----------------C
Q 002895 782 VLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD-----------------Q 840 (869)
Q Consensus 782 ~IDAtr~GN~aRFINHSC~PNc~~~~v~v~----G~~RI~ifA~RDI~aGEELTfDYgy~~d-----------------~ 840 (869)
+|||+.+||++|||||||+|||.+..++++ +.++|+|||+|||++||||||||++... .
T Consensus 204 ~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~ 283 (299)
T 1mvh_A 204 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLR 283 (299)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC-------------
T ss_pred EEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccccccccccccccccCC
Confidence 999999999999999999999988766554 3579999999999999999999986543 1
Q ss_pred CCcccCCCCCCC
Q 002895 841 APAWARKPEGSK 852 (869)
Q Consensus 841 ~pcwC~~p~~~k 852 (869)
.+|+||.++|++
T Consensus 284 ~~C~CGs~~Crg 295 (299)
T 1mvh_A 284 RQCKCGSANCRG 295 (299)
T ss_dssp ------------
T ss_pred cCcCCCCCCCcc
Confidence 489999999875
No 6
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=2.5e-37 Score=330.57 Aligned_cols=180 Identities=29% Similarity=0.537 Sum_probs=150.7
Q ss_pred ccCCcccCCCCccCCCcccccccCcc---------------CcccCcCccCCCCCCCCCCCCCCCCCCCCchHHhhcccC
Q 002895 656 RFRGCHCAKSQCRSRQCPCFAAGREC---------------DPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQ 720 (869)
Q Consensus 656 Rf~GC~C~~~~C~t~~CpC~~a~rEC---------------dPd~C~~C~~sCg~g~l~~p~~~~~~~C~Nr~lqrg~~k 720 (869)
.+.||.|. +.|.+..|+|.+...+| .+.+-.+|+..|+++ ..|.|+.+|++...
T Consensus 79 ~~~gC~C~-~~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~----------~~C~Nr~~q~g~~~ 147 (287)
T 3hna_A 79 HLQYCVCI-DDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCW----------RNCRNRVVQNGLRA 147 (287)
T ss_dssp GCCCCCCS-SSSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSC----------TTCSSCSGGGCCCS
T ss_pred CCCCCcCc-CCCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCC----------CCCCCcccCcCCcc
Confidence 46788884 57888889987643322 333445666666653 58999999999999
Q ss_pred cEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCc----EEEeccccCCcccccc
Q 002895 721 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQ----YVLDAYRKGDKLKFAN 796 (869)
Q Consensus 721 ~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~----~~IDAtr~GN~aRFIN 796 (869)
+++|++++.+||||||+++|++|+||+||+||||+..++++|. ..+|+|.++.. ++|||+.+||++||||
T Consensus 148 ~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r~------~~~Y~f~l~~~~~~~~~IDa~~~GN~aRFiN 221 (287)
T 3hna_A 148 RLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVRE------EDSYLFDLDNKDGEVYCIDARFYGNVSRFIN 221 (287)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTCS------CCTTEEESCCSSSSCEEEEEEEEECGGGGCE
T ss_pred cEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhhc------ccceEEEeccCCCceEEEeccccCCchheee
Confidence 9999999999999999999999999999999999999998763 46899988754 7999999999999999
Q ss_pred CCCCCCcceeEEEECC----eeEEEEEEecCCCCCCeEEEecCCC-----CCCCCcccCCCCCCC
Q 002895 797 HSSNPNCFAKVMLVAG----DHRVGIFAKEHIEASEELFYDYRYG-----PDQAPAWARKPEGSK 852 (869)
Q Consensus 797 HSC~PNc~~~~v~v~G----~~RI~ifA~RDI~aGEELTfDYgy~-----~d~~pcwC~~p~~~k 852 (869)
|||+|||.++.+++.+ .++|+|||+|||++||||||||++. ....+|+|+.++|+.
T Consensus 222 HSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~CRg 286 (287)
T 3hna_A 222 HHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRH 286 (287)
T ss_dssp ECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTCSC
T ss_pred ecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCCCC
Confidence 9999999987766543 3699999999999999999999853 245789999999873
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=1.5e-36 Score=326.19 Aligned_cols=146 Identities=22% Similarity=0.367 Sum_probs=116.6
Q ss_pred CCCCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcc--cCCcccccCCC-----
Q 002895 707 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDR--ANSSFLFDLND----- 779 (869)
Q Consensus 707 ~~C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~--~~~sYlf~L~~----- 779 (869)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|.. ....|+|.|+.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~ 199 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPD 199 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCcc
Confidence 58999999999999999999999999999999999999999999999999999999876643 34679998864
Q ss_pred ---------cEEEeccccCCccccccCCCCCCcceeEEEEC----CeeEEEEEEecCCCCCCeEEEecCCCCC-------
Q 002895 780 ---------QYVLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD------- 839 (869)
Q Consensus 780 ---------~~~IDAtr~GN~aRFINHSC~PNc~~~~v~v~----G~~RI~ifA~RDI~aGEELTfDYgy~~d------- 839 (869)
.++|||+.+||++|||||||+|||.+..+..+ +.++|+|||+|||++||||||||++...
T Consensus 200 ~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~ 279 (302)
T 1ml9_A 200 SLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAH 279 (302)
T ss_dssp SSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC----------
T ss_pred cccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccc
Confidence 58999999999999999999999987654432 2369999999999999999999986432
Q ss_pred -------CCCcccCCCCCCC
Q 002895 840 -------QAPAWARKPEGSK 852 (869)
Q Consensus 840 -------~~pcwC~~p~~~k 852 (869)
..+|+||.++|++
T Consensus 280 ~~~k~~~~~~C~CGs~~Crg 299 (302)
T 1ml9_A 280 DPSKISEMTKCLCGTAKCRG 299 (302)
T ss_dssp --------------------
T ss_pred cccccCCCcEeeCCCCcCcc
Confidence 2589999999874
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=319.70 Aligned_cols=146 Identities=28% Similarity=0.503 Sum_probs=133.1
Q ss_pred CCCCchHHhhcccCcEEEEEcC-CCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCC---CcEE
Q 002895 707 GQCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---DQYV 782 (869)
Q Consensus 707 ~~C~Nr~lqrg~~k~l~V~kS~-~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~---~~~~ 782 (869)
..|.|+.+|++...+++|+++. .+||||||+++|++|+||+||+||||+..++++|...|+..+.+|+|.++ ..++
T Consensus 127 ~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~ 206 (300)
T 2r3a_A 127 PDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFT 206 (300)
T ss_dssp TTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCSSCSSEE
T ss_pred CcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeecCCceEE
Confidence 5899999999999999999986 69999999999999999999999999999999999999888889999886 5689
Q ss_pred EeccccCCccccccCCCCCCcceeEEEEC----CeeEEEEEEecCCCCCCeEEEecCCCC-----------------CCC
Q 002895 783 LDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGP-----------------DQA 841 (869)
Q Consensus 783 IDAtr~GN~aRFINHSC~PNc~~~~v~v~----G~~RI~ifA~RDI~aGEELTfDYgy~~-----------------d~~ 841 (869)
|||+.+||++|||||||+|||.+..|.++ +.++|+|||+|||++||||||||++.. ...
T Consensus 207 IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~ 286 (300)
T 2r3a_A 207 VDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRT 286 (300)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------CCCC
T ss_pred EecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccccCCC
Confidence 99999999999999999999998888775 357999999999999999999998652 136
Q ss_pred CcccCCCCCCC
Q 002895 842 PAWARKPEGSK 852 (869)
Q Consensus 842 pcwC~~p~~~k 852 (869)
+|+||.++|++
T Consensus 287 ~C~CGs~~Crg 297 (300)
T 2r3a_A 287 VCKCGAVTCRG 297 (300)
T ss_dssp BCCCCCTTCCS
T ss_pred EeeCCCccccc
Confidence 89999999985
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=1.2e-33 Score=286.55 Aligned_cols=145 Identities=30% Similarity=0.548 Sum_probs=132.7
Q ss_pred CCCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccC-CcccccCCCcEEEecc
Q 002895 708 QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRAN-SSFLFDLNDQYVLDAY 786 (869)
Q Consensus 708 ~C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~-~sYlf~L~~~~~IDAt 786 (869)
.|.++.+|++...+|+|++++++||||||+++|++|+||+||+||||+..++++|...|+..+ ..|+|.++..++|||+
T Consensus 40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~IDa~ 119 (192)
T 2w5y_A 40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDAT 119 (192)
T ss_dssp HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEECT
T ss_pred chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEECc
Confidence 677788888888999999999999999999999999999999999999999999988887654 5899999999999999
Q ss_pred ccCCccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCCC----CCCcccCCCCCCC
Q 002895 787 RKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD----QAPAWARKPEGSK 852 (869)
Q Consensus 787 r~GN~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~d----~~pcwC~~p~~~k 852 (869)
..||++|||||||+|||.+..|.++|..+|+|||+|||++||||||||++... ..+|.|+.+.|++
T Consensus 120 ~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg 189 (192)
T 2w5y_A 120 MHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRK 189 (192)
T ss_dssp TTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCS
T ss_pred cccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcC
Confidence 99999999999999999999999999999999999999999999999997653 4689999999874
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.97 E-value=5.9e-32 Score=265.29 Aligned_cols=131 Identities=26% Similarity=0.431 Sum_probs=119.3
Q ss_pred CCchHHhhcccCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhccc--CCcccc---cCCCcEEE
Q 002895 709 CGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLF---DLNDQYVL 783 (869)
Q Consensus 709 C~Nr~lqrg~~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~--~~sYlf---~L~~~~~I 783 (869)
.-++.+|++...+++|+.++.+||||||+++|++|+||+||+|++|+..++++|...|... ...|+| .++..++|
T Consensus 19 ~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~i 98 (166)
T 3f9x_A 19 RIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCV 98 (166)
T ss_dssp HHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEE
T ss_pred HHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEE
Confidence 3567889999999999999999999999999999999999999999999999999888764 334555 37788999
Q ss_pred ecccc-CCccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCCC
Q 002895 784 DAYRK-GDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD 839 (869)
Q Consensus 784 DAtr~-GN~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~d 839 (869)
||+.. ||++|||||||.|||.+..+.+++.++|+|||+|||.+||||||||++...
T Consensus 99 Da~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 99 DATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp ECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred echhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 99996 999999999999999999999999999999999999999999999997653
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.95 E-value=9.1e-28 Score=253.75 Aligned_cols=117 Identities=29% Similarity=0.371 Sum_probs=103.9
Q ss_pred cCcEEEEEcCCC--CcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEecc--------cc
Q 002895 719 QQRILLAKSDVA--GWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAY--------RK 788 (869)
Q Consensus 719 ~k~l~V~kS~~k--G~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAt--------r~ 788 (869)
...++|.+|.++ ||||||+++|++|+||+||+||+|+..++++|...|+ .|+|.|+..++|||+ .+
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~----~~~f~l~~~~~IDa~~~~~~~~~~~ 183 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 183 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC----SSCEECSSSCEEECCTTTTSTTTCC
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc----cceeeecCCeEEEcccccccccccc
Confidence 467999999987 9999999999999999999999999999999977663 578999999999995 59
Q ss_pred CCccccccCCCCCCcceeEEEECCe-eEEEEEEecCCCCCCeEEEecCCCCC
Q 002895 789 GDKLKFANHSSNPNCFAKVMLVAGD-HRVGIFAKEHIEASEELFYDYRYGPD 839 (869)
Q Consensus 789 GN~aRFINHSC~PNc~~~~v~v~G~-~RI~ifA~RDI~aGEELTfDYgy~~d 839 (869)
||++|||||||+|||.+..|...+. ..|+|||+|||++||||||||++..+
T Consensus 184 Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 184 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp SCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred ccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 9999999999999999988743343 34599999999999999999998776
No 12
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93 E-value=7.6e-26 Score=241.15 Aligned_cols=117 Identities=28% Similarity=0.360 Sum_probs=104.1
Q ss_pred cCcEEEEEcCCCC--cEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEec--------ccc
Q 002895 719 QQRILLAKSDVAG--WGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDA--------YRK 788 (869)
Q Consensus 719 ~k~l~V~kS~~kG--~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDA--------tr~ 788 (869)
.+.+.|++|+++| |||||+++|++|+||+||+|++|+..++++|...+. .|+|.++..++||| +..
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~----~~~~~l~~~~~iDa~~~~~~~~~~~ 237 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 237 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC----TTEEECSSSCEEECCTTTTSTTTCC
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc----cCEEecCCCEEEeCcccccccceee
Confidence 4689999999866 999999999999999999999999999999976553 67899999999999 779
Q ss_pred CCccccccCCCCCCcceeEEEECCeeE-EEEEEecCCCCCCeEEEecCCCCC
Q 002895 789 GDKLKFANHSSNPNCFAKVMLVAGDHR-VGIFAKEHIEASEELFYDYRYGPD 839 (869)
Q Consensus 789 GN~aRFINHSC~PNc~~~~v~v~G~~R-I~ifA~RDI~aGEELTfDYgy~~d 839 (869)
||++|||||||+|||.+..+...+..+ |+|||+|||++||||||||++..+
T Consensus 238 gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 238 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp SCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred ccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 999999999999999998875444345 499999999999999999998754
No 13
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.92 E-value=2.6e-26 Score=214.86 Aligned_cols=107 Identities=24% Similarity=0.341 Sum_probs=96.0
Q ss_pred cCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEeccccCCccccccCC
Q 002895 719 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHS 798 (869)
Q Consensus 719 ~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAtr~GN~aRFINHS 798 (869)
.++++|++++++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..||.+||||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~-------~~~~y~f~~~~----d~~~~~~~~~~~NHs 71 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT-------ALEDYLFSRKN----MSAMALGFGAIFNHS 71 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH-------HSCSEEEEETT----EEEEESSSHHHHHSC
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh-------ccCCeEEEeCC----ccccccCceeeeccC
Confidence 4789999999999999999999999999999999999988865 34578898877 889999999999999
Q ss_pred CCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC
Q 002895 799 SNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 838 (869)
Q Consensus 799 C~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~ 838 (869)
|+|||.+.. +.+..++.|+|+|||++||||||||+...
T Consensus 72 c~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~ 109 (119)
T 1n3j_A 72 KDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDY 109 (119)
T ss_dssp SSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCC
T ss_pred CCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchh
Confidence 999997654 46778999999999999999999998664
No 14
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.92 E-value=1.2e-25 Score=219.69 Aligned_cols=117 Identities=19% Similarity=0.265 Sum_probs=97.9
Q ss_pred CCCchHHhhcccCcEEEEEcCC--CCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCC---C-cE
Q 002895 708 QCGNMRLLLRQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---D-QY 781 (869)
Q Consensus 708 ~C~Nr~lqrg~~k~l~V~kS~~--kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~---~-~~ 781 (869)
.+.|+. ++.....|.|++|.+ +||||||+++|++|++|+||+|++++..++. ...|+|.+. . .+
T Consensus 18 ~~~~~~-~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~---------~~~Y~f~i~~~~~~~~ 87 (149)
T 2qpw_A 18 EVPEHV-LRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK---------NNVYMWEVYYPNLGWM 87 (149)
T ss_dssp GSCHHH-HHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC---------CSSSEEEEEETTTEEE
T ss_pred hhhHHH-HhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc---------cCceEEEEecCCCeeE
Confidence 445553 456788999999975 6999999999999999999999999877642 357999873 3 36
Q ss_pred EEeccc--cCCccccccCCCCC---CcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC
Q 002895 782 VLDAYR--KGDKLKFANHSSNP---NCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 838 (869)
Q Consensus 782 ~IDAtr--~GN~aRFINHSC~P---Nc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~ 838 (869)
+|||+. .||++|||||||+| ||.+.. ...+|.|||+|||.+||||||||+...
T Consensus 88 ~IDa~~~~~gn~~RfINhSc~p~eqNl~~~~----~~~~I~~~A~RdI~~GEEL~~dY~~~~ 145 (149)
T 2qpw_A 88 CIDATDPEKGNWLRYVNWACSGEEQNLFPLE----INRAIYYKTLKPIAPGEELLVWYNGED 145 (149)
T ss_dssp EEECSSGGGSCGGGGCEECBTTBTCCEEEEE----ETTEEEEEESSCBCTTCBCEECCCCCC
T ss_pred EEeCCCCCCCcceeeeeccCChhhcCEEEEE----ECCEEEEEEccCCCCCCEEEEccCCcc
Confidence 899998 99999999999999 987632 346899999999999999999998654
No 15
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.86 E-value=2.8e-23 Score=220.41 Aligned_cols=127 Identities=17% Similarity=0.126 Sum_probs=93.0
Q ss_pred cEEEEEcC-----CCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEeccccCCccccc
Q 002895 721 RILLAKSD-----VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFA 795 (869)
Q Consensus 721 ~l~V~kS~-----~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAtr~GN~aRFI 795 (869)
.++|..+. .+||||||+++|++|+||+||+|+|+...+++++.-. ......|.+.... ...+++.+||.+|||
T Consensus 132 gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~-~~~~~dF~i~~s~-~~~~a~~~g~~arfi 209 (273)
T 3s8p_A 132 GFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLL-RHGENDFSVMYST-RKNCAQLWLGPAAFI 209 (273)
T ss_dssp CEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHC-CTTTSCTTEEEET-TTTEEEEEESGGGGC
T ss_pred CceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHh-hhcccccceeccc-cccccceecchHHhh
Confidence 46665544 4999999999999999999999999877776654211 1112222222111 113478899999999
Q ss_pred cCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC---CCCCcccCCCCCCC
Q 002895 796 NHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 852 (869)
Q Consensus 796 NHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~---d~~pcwC~~p~~~k 852 (869)
||||+|||.+. ..|..+|+|+|+|||++||||||||+... ....|.|+.++|..
T Consensus 210 NHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG 266 (273)
T 3s8p_A 210 NHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRG 266 (273)
T ss_dssp EECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHT
T ss_pred CCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCC
Confidence 99999999652 34556899999999999999999998543 34578888777653
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.81 E-value=1.8e-20 Score=196.66 Aligned_cols=121 Identities=18% Similarity=0.139 Sum_probs=86.9
Q ss_pred cEEEEEc-----CCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCCcEEEeccccCCccccc
Q 002895 721 RILLAKS-----DVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFA 795 (869)
Q Consensus 721 ~l~V~kS-----~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~~~~IDAtr~GN~aRFI 795 (869)
.++|..+ ..+||||||+++|++|++|+||+|+++...+++.+. +......|.+... ...+++..+||.+|||
T Consensus 104 g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~--~~~~~n~f~i~~~-~~~~~~~l~~~~ar~i 180 (247)
T 3rq4_A 104 GFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL--LRAGENDFSIMYS-TRKRSAQLWLGPAAFI 180 (247)
T ss_dssp CEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG--CCTTTSCTTEEEE-TTTTEEEEEESGGGGC
T ss_pred CcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh--hhccCCcEEEEec-CCcccceeecchhhhc
Confidence 4666554 358999999999999999999999998665555532 2222222322211 1124678889999999
Q ss_pred cCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCCC---CCCcccCC
Q 002895 796 NHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD---QAPAWARK 847 (869)
Q Consensus 796 NHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~d---~~pcwC~~ 847 (869)
||||.|||.+.. + +..+|.|+|+|||++||||||+|+.... ...|.|+.
T Consensus 181 NHSC~PN~~~~~--~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~ 232 (247)
T 3rq4_A 181 NHDCKPNCKFVP--A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHT 232 (247)
T ss_dssp EECSSCSEEEEE--E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHH
T ss_pred CCCCCCCEEEEE--e-CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCC
Confidence 999999996533 2 3458999999999999999999985432 24455543
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.78 E-value=2.8e-19 Score=178.34 Aligned_cols=111 Identities=21% Similarity=0.354 Sum_probs=82.4
Q ss_pred ccCcEEEEEcCC--CCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCC-----cEEEeccc--c
Q 002895 718 QQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND-----QYVLDAYR--K 788 (869)
Q Consensus 718 ~~k~l~V~kS~~--kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~-----~~~IDAtr--~ 788 (869)
....|.|.+|.+ +|+||||+++|++|++|++|+|++++.+++... .+..|+|.+.. .++||++. .
T Consensus 25 LP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~------~~~~y~w~i~~~~G~~~~~IDa~~e~~ 98 (170)
T 3ep0_A 25 LPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC------KNNNLMWEVFNEDGTVRYFIDASQEDH 98 (170)
T ss_dssp CCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------------CEEEEECTTSSEEEEEECC----
T ss_pred CCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc------cCCceEEEEecCCCcEEEEEECCCCCC
Confidence 456899999977 489999999999999999999999999887642 34678887632 27999998 7
Q ss_pred CCccccccCCCC---CCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC
Q 002895 789 GDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 838 (869)
Q Consensus 789 GN~aRFINHSC~---PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~ 838 (869)
||++|||||+|. +|+.+.. + ..+|.|+|+|||.+||||+|+|+-..
T Consensus 99 ~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y 147 (170)
T 3ep0_A 99 RSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSH 147 (170)
T ss_dssp --GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred cceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHH
Confidence 999999999996 8876543 2 35899999999999999999998544
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.75 E-value=2.9e-18 Score=167.70 Aligned_cols=124 Identities=15% Similarity=0.215 Sum_probs=87.7
Q ss_pred CCCCCchHHhhcccCcEEEEEcC-CCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCC--C--c
Q 002895 706 DGQCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN--D--Q 780 (869)
Q Consensus 706 ~~~C~Nr~lqrg~~k~l~V~kS~-~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~--~--~ 780 (869)
|....++.. .-....|.|..|. .+|+||||+++|++|+++++|.|++++..++..|. ..+..|+|.+. . .
T Consensus 10 d~~v~~ra~-~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~----~~~~~y~w~i~~~~~~~ 84 (151)
T 3db5_A 10 DTPIESRAR-LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT----DKAVNHIWKIYHNGVLE 84 (151)
T ss_dssp CCCCCCHHH-HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC---------------CCSEEEEEETTEEE
T ss_pred CCcCCChHH-hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc----ccCCCceEEEEeCCCEE
Confidence 334445543 3445678898863 48999999999999999999999999999887752 12345777542 2 3
Q ss_pred EEEeccc--cCCccccccCCCC---CCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCCC
Q 002895 781 YVLDAYR--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 838 (869)
Q Consensus 781 ~~IDAtr--~GN~aRFINHSC~---PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~~ 838 (869)
++||++. .||++|||||+|. +|+.+.. . ..+|.|+|+|||.+||||+|+|+-..
T Consensus 85 ~~iD~~~~~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~rdI~pGeELlv~Yg~~y 143 (151)
T 3db5_A 85 FCIITTDENECNWMMFVRKARNREEQNLVAYP--H--DGKIFFCTSQDIPPENELLFYYSRDY 143 (151)
T ss_dssp EEEECCCTTTSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred EEEECcCCCCCcceeEEEecCCcccCceEEEE--E--CCEEEEEEccccCCCCEEEEecCHHH
Confidence 6899997 5999999999995 5987643 2 35799999999999999999998443
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.73 E-value=1.8e-18 Score=176.01 Aligned_cols=109 Identities=18% Similarity=0.316 Sum_probs=90.6
Q ss_pred cccCcEEEEEcCC--CCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCCC----cEEEeccc--c
Q 002895 717 RQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND----QYVLDAYR--K 788 (869)
Q Consensus 717 g~~k~l~V~kS~~--kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~~----~~~IDAtr--~ 788 (869)
-....|.|..|.+ +|+||||+++|++|+++++|.|++++.+++.+ ..+..|+|.+.. .++|||+. .
T Consensus 55 SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~------~~~~~y~w~i~~~g~~~~~IDas~e~~ 128 (196)
T 3dal_A 55 SLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPK------NANRKYFWRIYSRGELHHFIDGFNEEK 128 (196)
T ss_dssp TCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---------CCTTEEEEEETTEEEEEEECCCTTS
T ss_pred cCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhh------ccCCcceeeeccCCCEEEEEECCCCCC
Confidence 3467899999977 89999999999999999999999999877543 234678887632 27999987 8
Q ss_pred CCccccccCCCC---CCcceeEEEECCeeEEEEEEecCCCCCCeEEEecC
Q 002895 789 GDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 835 (869)
Q Consensus 789 GN~aRFINHSC~---PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYg 835 (869)
||++|||||+|. +|+.+.. . ..+|.|+|+|||.|||||+|+|+
T Consensus 129 gNWmRfVn~A~~~~eqNl~a~q--~--~~~I~y~a~RdI~pGeELlvwYg 174 (196)
T 3dal_A 129 SNWMRYVNPAHSPREQNLAACQ--N--GMNIYFYTIKPIPANQELLVWYC 174 (196)
T ss_dssp SCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEEC
T ss_pred CceEEeEEecCCcccCCcEEEE--E--CCEEEEEECcccCCCCEEEEecC
Confidence 999999999995 7986633 2 36799999999999999999998
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.56 E-value=3.4e-15 Score=155.49 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=84.2
Q ss_pred cccCcEEEEEcCCCCcEEEEc-cccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccCC----CcEEEeccc--cC
Q 002895 717 RQQQRILLAKSDVAGWGAFLK-NSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN----DQYVLDAYR--KG 789 (869)
Q Consensus 717 g~~k~l~V~kS~~kG~GLFA~-edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L~----~~~~IDAtr--~G 789 (869)
-....|.|.+|.++|+|||+. +.|++|+.+|+|.|++++..+++ ..|+|.+. ..++||+.. .|
T Consensus 69 SLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~----------~~y~wei~~~~g~~~~IDgsde~~g 138 (237)
T 3ray_A 69 TIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA----------GFFSWLIVDKNNRYKSIDGSDETKA 138 (237)
T ss_dssp TCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------------CCEEEEECTTSCEEEEECCCTTTS
T ss_pred cCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc----------ccceEEEEcCCCcEEEEecCCCCCC
Confidence 345679999999999999987 89999999999999999887653 23555442 236899997 79
Q ss_pred CccccccCCCC---CCcceeEEEECCeeEEEEEEecCCCCCCeEEEecC
Q 002895 790 DKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 835 (869)
Q Consensus 790 N~aRFINHSC~---PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYg 835 (869)
|++|||||+|. +|+.+.. . ..+|.|+|+|+|.+||||+|+|+
T Consensus 139 NWmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg 183 (237)
T 3ray_A 139 NWMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYS 183 (237)
T ss_dssp CGGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEEC
T ss_pred cceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeC
Confidence 99999999995 6876533 2 36789999999999999999997
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.51 E-value=8e-15 Score=143.81 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=79.3
Q ss_pred cCcEEEEEcCCCCcEEEEccccCCCCeeEEecccccCHHHHHHhhhhhcccCCcccccC------------CCcEEEecc
Q 002895 719 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDL------------NDQYVLDAY 786 (869)
Q Consensus 719 ~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~GEIIs~~Ea~rR~k~yd~~~~sYlf~L------------~~~~~IDAt 786 (869)
...|+|.+ .|+||||+++|++|+.+++|.|++++..++.. ..|+|.+ +..++||++
T Consensus 22 P~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~---------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 22 PLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD---------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp CTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS---------SSCCCBC---------------CEECCC
T ss_pred CcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc---------CcceEEEEccccccccccCCccEEEEcc
Confidence 34566654 58999999999999999999999999876532 2333332 125789998
Q ss_pred c--cCCccccccCCCC---CCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCC
Q 002895 787 R--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 836 (869)
Q Consensus 787 r--~GN~aRFINHSC~---PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy 836 (869)
. .||++|||||+|. +||.+.. ...+|.|.|+|+|.+||||+++|+-
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~~ 140 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYAA 140 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEECH
T ss_pred CCCCCcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEechH
Confidence 7 5999999999997 7876532 2357889999999999999999973
No 22
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.19 E-value=6.9e-07 Score=99.97 Aligned_cols=44 Identities=32% Similarity=0.394 Sum_probs=35.9
Q ss_pred CccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCCC
Q 002895 790 DKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 837 (869)
Q Consensus 790 N~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy~ 837 (869)
..+.||||||.|||.+.. .| .++.|+|+|||++|||||++|...
T Consensus 200 ~~~s~~NHsC~PN~~~~~---~~-~~~~~~a~r~I~~GeEl~isY~~~ 243 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF---NG-PHLLLRAVRDIEVGEELTICYLDM 243 (429)
T ss_dssp TTGGGCEECSSCSEEEEE---ET-TEEEEEECSCBCTTCEEEECCSCS
T ss_pred hhhHhhCcCCCCCeEEEE---eC-CEEEEEEeeeECCCCEEEEEecCC
Confidence 356899999999996532 23 468899999999999999999743
No 23
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.16 E-value=9.2e-07 Score=100.84 Aligned_cols=44 Identities=32% Similarity=0.446 Sum_probs=35.2
Q ss_pred ccccccCCCCCCcceeEEEECCe-----------eEEEEEEecCCCCCCeEEEecCC
Q 002895 791 KLKFANHSSNPNCFAKVMLVAGD-----------HRVGIFAKEHIEASEELFYDYRY 836 (869)
Q Consensus 791 ~aRFINHSC~PNc~~~~v~v~G~-----------~RI~ifA~RDI~aGEELTfDYgy 836 (869)
.+.||||||.|||.+.. .++. .+|.|+|+|||++||||||+|..
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~ 254 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYID 254 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSC
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecC
Confidence 34678999999996433 3332 28999999999999999999963
No 24
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.00 E-value=2.6e-06 Score=95.75 Aligned_cols=42 Identities=26% Similarity=0.423 Sum_probs=34.0
Q ss_pred ccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCC
Q 002895 791 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 836 (869)
Q Consensus 791 ~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy 836 (869)
.+.|+||||.|||.+. + +| .++.|+|+|||++|||||++|..
T Consensus 201 ~~s~~NHsC~PN~~~~--~-~~-~~~~~~a~r~I~~Geel~i~Y~~ 242 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--Y-KG-TLAEVRAVQEIHPGDEVFTSYID 242 (433)
T ss_dssp TGGGSEECSSCSEEEE--E-ET-TEEEEEESSCBCTTCEEEECCSC
T ss_pred cccccCCCCCCCceEE--E-cC-CEEEEEeccCcCCCCEEEEeecC
Confidence 3468899999998653 2 33 35789999999999999999964
No 25
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=96.36 E-value=0.0022 Score=55.77 Aligned_cols=51 Identities=20% Similarity=0.265 Sum_probs=44.8
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHh
Q 002895 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (869)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~ 222 (869)
+|.--|..||+.||.+|....+++|-. -..||++|++++-+|++||+.|+.
T Consensus 18 dP~i~k~~wT~EED~~L~~l~~~~G~k---W~~IA~~lgRt~~q~knRw~~L~~ 68 (73)
T 2llk_A 18 GDRNHVGKYTPEEIEKLKELRIKHGND---WATIGAALGRSASSVKDRCRLMKD 68 (73)
T ss_dssp -CCCCCCSSCHHHHHHHHHHHHHHSSC---HHHHHHHHTSCHHHHHHHHHHCSC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHhCCCHHHHHHHHHHHHH
Confidence 344557789999999999999999976 888999889999999999999876
No 26
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.05 E-value=0.0032 Score=71.05 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=33.6
Q ss_pred ccccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecCC
Q 002895 791 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 836 (869)
Q Consensus 791 ~aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYgy 836 (869)
++-++||+|.||+.+. .++ ..+.++|.|+|++|||||++||-
T Consensus 222 ~~D~~NH~~~~~~~~~---~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 222 AADILNHLANHNANLE---YSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp TGGGCEECSSCSEEEE---ECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred cHHHhcCCCCCCeEEE---EeC-CeEEEEECCCcCCCchhhccCCC
Confidence 3457999999998542 233 36789999999999999999984
No 27
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=95.95 E-value=0.0034 Score=70.20 Aligned_cols=45 Identities=20% Similarity=0.299 Sum_probs=33.8
Q ss_pred cccccCCCCCCcceeEEEECC-------eeEEEEEEecCCCCCCeEEEecCC
Q 002895 792 LKFANHSSNPNCFAKVMLVAG-------DHRVGIFAKEHIEASEELFYDYRY 836 (869)
Q Consensus 792 aRFINHSC~PNc~~~~v~v~G-------~~RI~ifA~RDI~aGEELTfDYgy 836 (869)
+=++||++.||.....|.+.+ ...+.+.|.++|++|||||++||-
T Consensus 190 ~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~ 241 (440)
T 2h21_A 190 ADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDL 241 (440)
T ss_dssp TTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCT
T ss_pred hHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCC
Confidence 347899999985433444432 457889999999999999999984
No 28
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=95.64 E-value=0.013 Score=50.96 Aligned_cols=53 Identities=9% Similarity=0.290 Sum_probs=46.0
Q ss_pred CccccccCCcccchhhhhHhhhcCCh-HHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLG-EEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
++-.+..|+..||.+|..+++.||.. ..=...||++| ++|..++++||+.|.+
T Consensus 14 ~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 14 ARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred cccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 44456789999999999999999964 34479999999 8999999999999987
No 29
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.15 E-value=0.03 Score=47.08 Aligned_cols=44 Identities=27% Similarity=0.428 Sum_probs=39.1
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
...||.-|..+|..++..||+|+-.||+.++ +.||-.||-+|..
T Consensus 9 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 52 (63)
T 2yqk_A 9 EKCWTEDEVKRFVKGLRQYGKNFFRIRKELL-PNKETGELITFYY 52 (63)
T ss_dssp CCSCCHHHHHHHHHHHHHTCSCHHHHHHHSC-TTSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCcHHHHHHHHh
Confidence 4689999999999999999999999999633 7899999988665
No 30
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=94.04 E-value=0.004 Score=53.48 Aligned_cols=47 Identities=13% Similarity=0.331 Sum_probs=44.0
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHh
Q 002895 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (869)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~ 222 (869)
-.+..+|++|=.+.|+-|-+++.|..||+.|+.++.||.+||..|..
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~Lnks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSERFQQLMK 62 (70)
Confidence 46778999999999999999999999999999999999999999875
No 31
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.65 E-value=0.045 Score=45.57 Aligned_cols=43 Identities=26% Similarity=0.299 Sum_probs=38.3
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
...||+-|..||..++..||+++-.||..| +.||-.+|-.|..
T Consensus 12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l--~~rt~~~~v~~Yy 54 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHPKNFGLIASYL--ERKSVPDCVLYYY 54 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHSTTCHHHHHHHC--TTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 468999999999999999999999999766 6799999987654
No 32
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.50 E-value=0.02 Score=65.54 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=31.4
Q ss_pred cccccCCCCCCcceeEEEECCeeEEEEEEecCCCCCCeEEEecC
Q 002895 792 LKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 835 (869)
Q Consensus 792 aRFINHSC~PNc~~~~v~v~G~~RI~ifA~RDI~aGEELTfDYg 835 (869)
+=++||+|.||.. .|.. ....+.++|.++|++|||||++||
T Consensus 273 ~Dm~NH~~~~~~~--~~~~-~~~~~~~~a~~~i~~Geei~isYG 313 (497)
T 3smt_A 273 WDMCNHTNGLITT--GYNL-EDDRCECVALQDFRAGEQIYIFYG 313 (497)
T ss_dssp GGGCEECSCSEEE--EEET-TTTEEEEEESSCBCTTCEEEECCC
T ss_pred HHhhcCCCcccce--eeec-cCCeEEEEeCCccCCCCEEEEeCC
Confidence 4478999999631 2322 334677899999999999999997
No 33
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=94.46 E-value=0.05 Score=46.69 Aligned_cols=44 Identities=23% Similarity=0.420 Sum_probs=39.4
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
...||+-|..+|..++..||+|+-.||++++ +.||-.+|-+|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 51 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFL-PWKSLTSIIEYYY 51 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-SSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCCHHHHHHHHH
Confidence 5689999999999999999999999999633 7899999988765
No 34
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=94.42 E-value=0.055 Score=46.28 Aligned_cols=53 Identities=9% Similarity=0.055 Sum_probs=45.1
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhhcC
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKYD 225 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~~ 225 (869)
|.-.+..|++.||.+|-..+++||- -...||++| ++++.+|+.||..+..+..
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~---~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~ 58 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGR---RWTKISKLIGSRTVLQVKSYARQYFKNKV 58 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCS---CHHHHHHHHSSSCHHHHHHHHHHHHHHHS
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCc---CHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 3445778999999999999999998 477888888 8999999999998876543
No 35
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.97 E-value=0.049 Score=46.75 Aligned_cols=53 Identities=8% Similarity=0.051 Sum_probs=44.2
Q ss_pred CccccccCCcccchhhhhHhhhcCChH---HHHHHHHHHh-cCCcHHHHHHH-HHhHh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGE---EVINAVSQFI-GIATSEVQDRY-STLKE 222 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd---~v~~~l~~~~-~~~~sei~eRy-~~L~~ 222 (869)
|.--|..|+..||.+|...++.||... .=...||++| ++|+.++++|| +.|..
T Consensus 4 p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~ 61 (75)
T 2yum_A 4 GSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIK 61 (75)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 445577899999999999999999643 5578999999 79999999999 55544
No 36
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.81 E-value=0.049 Score=45.67 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=44.9
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHhcCCcHHHHHHHHHhHhh
Q 002895 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~~~~sei~eRy~~L~~k 223 (869)
.|.--|..|+..||.+|-...+++|- --..||+++++++.++++||..+..+
T Consensus 4 ~P~~~k~~WT~eED~~L~~~~~~~g~---~W~~Ia~~~gRt~~qcr~Rw~~~l~~ 55 (66)
T 2din_A 4 GSSGKKTEWSREEEEKLLHLAKLMPT---QWRTIAPIIGRTAAQCLEHYEFLLDK 55 (66)
T ss_dssp SSSSSCCCCCHHHHHHHHHHHHHCTT---CHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCC---CHHHHhcccCcCHHHHHHHHHHHhCh
Confidence 35556788999999999999999997 36788888899999999999988654
No 37
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=93.64 E-value=0.048 Score=45.10 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=41.0
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
-+..|+..||.+|-.+++.||... -..||++| ++++.++++||...-.
T Consensus 7 ~~~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 7 GDPSWTAQEEMALLEAVMDCGFGN--WQDVANQMCTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCSSSCHHHHHHHHHHHHHTCTTC--HHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCc--HHHHHHHhCCCCHHHHHHHHHHHcc
Confidence 467899999999999999999743 67788888 7999999999987644
No 38
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=93.36 E-value=0.055 Score=45.65 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=41.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh---cCCcHHHHHHHHHhHhh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~---~~~~sei~eRy~~L~~k 223 (869)
.|+-|+..||.+|...+++||-.. -..|++++ ++++.++++||..|...
T Consensus 10 kk~~WT~eED~~L~~~V~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~ 61 (64)
T 3sjm_A 10 KKQKWTVEESEWVKAGVQKYGEGN--WAAISKNYPFVNRTAVMIKDRWRTMKRL 61 (64)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHccCCCc--hHHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence 477899999999999999999643 55667653 79999999999998763
No 39
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=93.24 E-value=0.055 Score=44.49 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=42.5
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
|.--|..|+..||.+|...+++||... -..||++| ++++.++++||..+-.
T Consensus 4 p~~~k~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~l~ 55 (60)
T 2d9a_A 4 GSSGKVKWTHEEDEQLRALVRQFGQQD--WKFLASHFPNRTDQQCQYRWLRVLS 55 (60)
T ss_dssp CCCCCSCCCHHHHHHHHHHHHHTCTTC--HHHHHHHCSSSCHHHHHHHHHHTSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHccCCCHHHHHHHHHHHcC
Confidence 334577899999999999999999522 67888888 7999999999987754
No 40
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=93.17 E-value=0.067 Score=42.65 Aligned_cols=46 Identities=17% Similarity=0.353 Sum_probs=39.9
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (869)
|..|+..||.+|...+++||-. =-..||++| ++++.++++||..+-
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTD--DWKVIANYLPNRTDVQCQHRWQKVL 49 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSS--CHHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCC--CHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 4679999999999999999972 267888888 899999999998764
No 41
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=93.03 E-value=0.07 Score=43.92 Aligned_cols=45 Identities=22% Similarity=0.480 Sum_probs=39.3
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHhc--CCcHHHHHHHHHh
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG--IATSEVQDRYSTL 220 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~--~~~sei~eRy~~L 220 (869)
+..|+..||.+|...+++||..+ -..||++|+ +++.++++||..+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~--W~~IA~~~~~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGN--WADIADYVGNARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTC--HHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHHCCCCCHHHHHHHHHHH
Confidence 56799999999999999999643 678899996 8999999999875
No 42
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=92.35 E-value=0.092 Score=47.61 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=43.2
Q ss_pred cccCCcccchhhhhHhhhcCChH-HHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGE-EVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd-~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
+..|+..||.+|..+++.||... .=.+.||++| ++|..|+++||+.|.+.
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~d 59 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 59 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 56799999999999999998742 3478999999 79999999999999753
No 43
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=92.35 E-value=0.096 Score=45.31 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=43.5
Q ss_pred cccCCcccchhhhhHhhhcCCh-HHHHHHHHHHhcCCcHHHHHHHHHhHhh
Q 002895 174 KHEFSDGEDRILWTVFEEHGLG-EEVINAVSQFIGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~~~~~sei~eRy~~L~~k 223 (869)
...|+..||.+|-.+++.|+-. ..=.+.||++|+++..||++||+.|.+.
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 3569999999999999999863 2347999999999999999999999874
No 44
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=92.26 E-value=0.13 Score=53.62 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.3
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHhh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 542 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~~ 542 (869)
...||.-|..+|+.++..||+++..||+.| |+||-.+|-.|-..
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~V--gTKT~~QcKnfY~~ 176 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 176 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 88999999887764
No 45
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=91.83 E-value=0.093 Score=47.47 Aligned_cols=47 Identities=23% Similarity=0.423 Sum_probs=43.7
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
..+..+|++|=...|+-|-+.+-|..||+.| ..++.||++||..|..
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~ 82 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQ 82 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 4778899999999999999999999999999 5999999999999865
No 46
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=91.40 E-value=0.14 Score=41.07 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=39.3
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHhc---CCcHHHHHHHHHhHh
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG---IATSEVQDRYSTLKE 222 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~~---~~~sei~eRy~~L~~ 222 (869)
|.-|+..||.+|...+++||.. =-..|+++|. +++.++++||..|..
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEG--NWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTT--CHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--CHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 4679999999999999999953 2566777775 999999999998865
No 47
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=90.96 E-value=0.22 Score=45.38 Aligned_cols=48 Identities=21% Similarity=0.397 Sum_probs=43.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
.+..|++.||.+|-...++||-. -..||++| ++++.+|+.||..|..+
T Consensus 52 ~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~r~ 100 (107)
T 2k9n_A 52 RTDPWSPEEDMLLDQKYAEYGPK---WNKISKFLKNRSDNNIRNRWMMIARH 100 (107)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSC---HHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHhCcC---HHHHHHHCCCCCHHHHHHHHHHHHhh
Confidence 46789999999999999999974 78889999 99999999999999765
No 48
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=90.82 E-value=0.17 Score=47.53 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=44.8
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
|.--+..|+..||.+|....++||-. -..||++| +++..+|+.||..|..+
T Consensus 58 p~~~~~~WT~eEd~~L~~~v~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 58 PSISHTPWTAEEDALLVQKIQEYGRQ---WAIIAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 33345679999999999999999975 78899999 99999999999999876
No 49
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=90.65 E-value=0.3 Score=44.17 Aligned_cols=44 Identities=30% Similarity=0.259 Sum_probs=39.4
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHhh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 542 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~~ 542 (869)
...||.-|+.+|..+...||+++-.||..| +.||-.|+-.|...
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l--~~Kt~~~cV~~YY~ 86 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFL--ERKTVAECVLYYYL 86 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTC--TTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHc--CCCCHHHHHHHHhc
Confidence 578999999999999999999999999866 88999999887653
No 50
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=90.58 E-value=0.14 Score=40.87 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=39.4
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (869)
|..|+..||.+|...+++||-. =-..||++| +++..++++||...-
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPK--RWSVIAKHLKGRIGKQCRERWHNHL 49 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTT--CHHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--hHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 5679999999999999999952 267888888 899999999998653
No 51
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=90.22 E-value=0.19 Score=45.38 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=43.8
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
|.-.+..|+..||.+|-...++||-. -..||++| ++|+.+|+.||..|..+
T Consensus 52 p~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 52 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHSSC---HHHHHTTCTTCCHHHHHHHHHHHTC-
T ss_pred CcccccCCCHHHHHHHHHHHHHhCCC---HHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 33457789999999999999999964 78899999 99999999999988654
No 52
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=89.35 E-value=0.13 Score=45.21 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=41.3
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
.+..|+..||.+|-.+++.|| .=...||++| ++++.++++||..|-.
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G---~~W~~IA~~v~~RT~~qcr~r~~~~~i 64 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYK---DDWNKVSEHVGSRTQDECILHFLRLPI 64 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSS---SCHHHHHHHHSSCCHHHHHHHHTTSCC
T ss_pred cCCCcCHHHHHHHHHHHHHhC---CCHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 467899999999999999999 3478899999 6999999999998843
No 53
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=88.05 E-value=0.81 Score=40.10 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
...||.-|..+|+.+++.||.|.-.||+.| +.||=.|+-.+..
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v--~~RT~~qcr~r~~ 60 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYKDDWNKVSEHV--GSRTQDECILHFL 60 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSSSCHHHHHHHH--SSCCHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 568999999999999999999999999987 7799888876554
No 54
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=88.01 E-value=0.91 Score=38.63 Aligned_cols=41 Identities=37% Similarity=0.677 Sum_probs=35.6
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTY 539 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~y 539 (869)
...||.-|..+++.++..||.++-.||+.| +.+|=.+|-.+
T Consensus 9 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~--~~Rt~~q~k~r 49 (72)
T 2cu7_A 9 SVKWTIEEKELFEQGLAKFGRRWTKISKLI--GSRTVLQVKSY 49 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHH--SSSCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHH
Confidence 568999999999999999999999999976 56887777553
No 55
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=87.84 E-value=0.88 Score=37.44 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=34.5
Q ss_pred CCCCcHHHHHHHHHhHHhcC-CchHHHHHhhcCCCCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg-~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
...||+-|..+++.++..|| .|.-.||..| +.+|=.|+-.
T Consensus 8 ~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCGFGNWQDVANQM--CTKTKEECEK 48 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTCTTCHHHHHHHH--TTSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCcHHHHHHHh--CCCCHHHHHH
Confidence 56799999999999999999 7999999988 5688666644
No 56
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.70 E-value=0.35 Score=40.87 Aligned_cols=48 Identities=13% Similarity=0.244 Sum_probs=40.5
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
-+.-|+..||.+|...++.||... -..||++| +++..++++||...-.
T Consensus 8 k~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~L~ 56 (70)
T 2dim_A 8 KGGVWRNTEDEILKAAVMKYGKNQ--WSRIASLLHRKSAKQCKARWYEWLD 56 (70)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSSC--HHHHHHHSTTCCHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHhcCCCHHHHHHHHHHHcC
Confidence 466899999999999999999532 57788888 6999999999987644
No 57
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=87.18 E-value=0.39 Score=40.53 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=41.7
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh---cCCcHHHHHHHHHhHhh
Q 002895 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~---~~~~sei~eRy~~L~~k 223 (869)
---+.-|+..||.+|...+++||.. =-..|+++| ++++.++++||..+...
T Consensus 7 ~~~r~~WT~eED~~L~~~v~~~G~~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 7 ARKRQAWLWEEDKNLRSGVRKYGEG--NWSKILLHYKFNNRTSVMLKDRWRTMKKL 60 (69)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHHCSS--CHHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCC--cHHHHHHHcCcCCCCHHHHHHHHHHHcCC
Confidence 3456789999999999999999953 246667777 49999999999998764
No 58
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=87.03 E-value=0.12 Score=46.20 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=43.4
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
|.--+..|+..||.+|-..+++||-. ...||++| ++|..+|++||..+..+
T Consensus 12 p~~~~~~WT~eEd~~l~~~~~~~G~~---W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 12 ENLYFQGWTEEEMGTAKKGLLEHGRN---WSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 33446679999999999999999983 88999999 89999999999876553
No 59
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=87.04 E-value=0.34 Score=45.44 Aligned_cols=50 Identities=18% Similarity=0.454 Sum_probs=43.6
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
.-.+..|++.||.+|-...++||-. -..||++| ++++.+|+.||..|..+
T Consensus 76 ~~~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~r~~~~~~~ 126 (128)
T 1h8a_C 76 EVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAVKNHWNSTMRR 126 (128)
T ss_dssp SSCCSCCCHHHHHHHHHHHHHHCSC---HHHHGGGSTTCCHHHHHHHHHTTTTC
T ss_pred ccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 3356789999999999999999964 77889999 99999999999988654
No 60
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=85.67 E-value=1.1 Score=36.61 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHhHHhcC-CchHHHHHhhcCC-CCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSG-LKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg-~NsC~iAr~ll~g-~KtC~eV~~ 538 (869)
...||+-|-.+++.+++.|| .|.-.||+.| + .+|=.|+-.
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~--~~~Rt~~qcr~ 50 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYV--GNARTKEECRD 50 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHH--CSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHH--CCCCCHHHHHH
Confidence 46799999999999999999 8999999987 5 677665543
No 61
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.61 E-value=1.1 Score=38.31 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHhHHhcC------CchHHHHHhhcCCCCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG------RNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg------~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
...||.-|..+|+.++..|| .+.-.||..| +.+|=.||-.
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~--~~Rt~~qcr~ 53 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADEL--GNRTAKQVAS 53 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHH--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHh--CCCCHHHHHH
Confidence 46899999999999999999 7899999987 6688666643
No 62
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=84.57 E-value=0.59 Score=42.55 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=38.1
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (869)
|.-|+..||.+|...++.||..+ -..||++| ++++.++.+||...-
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~L 47 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKD--WIRISQLMITRNPRQCRERWNNYI 47 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSC--HHHHHHHTTTSCHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHhhhcCCCCHHHHHHHHHHHH
Confidence 45699999999999999999632 57788888 799999999997643
No 63
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=84.12 E-value=0.97 Score=51.73 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.8
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHhh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 542 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~~ 542 (869)
...||.-|..+|+.++..||+|+=.||+.+ |+||-.+|-.|...
T Consensus 380 ~~~WT~eE~~~f~~al~~yGkdw~~IA~~V--gTKT~~Qvk~fy~~ 423 (482)
T 2xag_B 380 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 423 (482)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHh--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 89999999988764
No 64
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=83.85 E-value=0.98 Score=42.56 Aligned_cols=51 Identities=18% Similarity=0.381 Sum_probs=44.1
Q ss_pred ccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhhc
Q 002895 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKY 224 (869)
Q Consensus 171 eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~ 224 (869)
.--+..|+..||.+|-...++||-. -..||++| +++..+|+.||..+..+.
T Consensus 51 ~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~l~~~ 102 (131)
T 3zqc_A 51 AVVKHAWTPEEDETIFRNYLKLGSK---WSVIAKLIPGRTDNAIKNRWNSSISKR 102 (131)
T ss_dssp TCCCSCCCHHHHHHHHHHHHHSCSC---HHHHTTTSTTCCHHHHHHHHHHTTGGG
T ss_pred cccCCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 3346689999999999999999975 78899999 999999999999887654
No 65
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=83.74 E-value=0.54 Score=42.43 Aligned_cols=46 Identities=13% Similarity=0.297 Sum_probs=40.1
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (869)
|..|+..||.+|...++.||... -..||++| ++++.++.+||...-
T Consensus 4 k~~WT~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 50 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHL 50 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTC--HHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCc--HHHHhhhhcCCCHHHHHHHHHhcc
Confidence 56799999999999999999732 67889999 899999999998754
No 66
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=83.66 E-value=1.6 Score=34.48 Aligned_cols=39 Identities=28% Similarity=0.271 Sum_probs=32.8
Q ss_pred CCCCcHHHHHHHHHhHHhcCC-chHHHHHhhcCCCCchHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVS 537 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~-NsC~iAr~ll~g~KtC~eV~ 537 (869)
...||+-|..+++.++..||. |.-.||..| +.+|=.++-
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr 42 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIANYL--PNRTDVQCQ 42 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTS--TTCCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--CCCCHHHHH
Confidence 467999999999999999998 999999987 456655553
No 67
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=81.77 E-value=0.76 Score=44.55 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=43.9
Q ss_pred CccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 170 ~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
|.-.+..|++.||.+|-...++||-. -..||++| ++|+.+|+.||+.|..+
T Consensus 106 p~~~~~~WT~eEd~~L~~~~~~~g~~---W~~Ia~~l~gRt~~~~knr~~~~~r~ 157 (159)
T 1h89_C 106 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 157 (159)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHTTTCC
T ss_pred ccccccCCChHHHHHHHHHHHHHCCC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 34457789999999999999999964 67888999 99999999999988654
No 68
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=81.10 E-value=2.5 Score=34.41 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=33.7
Q ss_pred CCCCcHHHHHHHHHhHHhcC-CchHHHHHhhcCCCCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg-~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
...||+-|..+++.+|..|| .+.-.||..| +.+|=.++-.
T Consensus 8 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 2d9a_A 8 KVKWTHEEDEQLRALVRQFGQQDWKFLASHF--PNRTDQQCQY 48 (60)
T ss_dssp CSCCCHHHHHHHHHHHHHTCTTCHHHHHHHC--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--cCCCHHHHHH
Confidence 56799999999999999999 5999999987 4577666644
No 69
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=80.46 E-value=1.2 Score=41.74 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=43.5
Q ss_pred CCccccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 169 e~eeek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
.|.-.|..|+..||.+|...+++||... -..||++| ++++.++.+||..+-.
T Consensus 22 ~p~~~k~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 74 (128)
T 1h8a_C 22 NPELNKGPWTKEEDQRVIEHVQKYGPKR--WSDIAKHLKGRIGKQCRERWHNHLN 74 (128)
T ss_dssp CTTCCCSCCCHHHHHHHHHHHHHTCSCC--HHHHHHHSSSCCHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhcCCcHHHHHHHHHHhcc
Confidence 3555678899999999999999999632 67888888 8999999999987543
No 70
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=80.35 E-value=0.93 Score=42.49 Aligned_cols=47 Identities=19% Similarity=0.350 Sum_probs=40.9
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhH
Q 002895 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~ 221 (869)
--|.-|+..||.+|...++.||. --..||++| ++++.++.+||...-
T Consensus 9 ~kk~~WT~eED~~L~~~v~~~G~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 9 AKKQKFTPEEDEMLKRAVAQHGS---DWKMIAATFPNRNARQCRDRWKNYL 56 (126)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTT---CHHHHHHTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHhhhc
Confidence 34677999999999999999997 378888888 999999999998754
No 71
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=79.16 E-value=0.85 Score=47.86 Aligned_cols=52 Identities=17% Similarity=0.394 Sum_probs=45.0
Q ss_pred ccccCCcccchhhhhHhhhcCC---hHHHHHHHHHHh-cCCcHHHHHHHHHhHhhc
Q 002895 173 EKHEFSDGEDRILWTVFEEHGL---GEEVINAVSQFI-GIATSEVQDRYSTLKEKY 224 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~---sd~v~~~l~~~~-~~~~sei~eRy~~L~~k~ 224 (869)
-|..|++.||.+|-...+++|- +..-...||++| ++|.-.|++||+.+-.+.
T Consensus 7 ~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~~ 62 (246)
T 1ign_A 7 NKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKR 62 (246)
T ss_dssp -CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGG
T ss_pred CCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhhh
Confidence 3568999999999999999998 456789999999 999999999999976653
No 72
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=78.92 E-value=3.1 Score=35.96 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=35.1
Q ss_pred ccCCCCcHHHHHHHHHhHHhcC----CchHHHHHhhcCCCCchHHHHH
Q 002895 495 LCSSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 495 ~~~~~W~~~E~~l~~k~~~ifg----~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
.....||.-|..+|+.++.+|| .+.=.||+.| +.||=.||-.
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~v--pGRT~~qcr~ 61 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV--PSKSKEDCIA 61 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC--SSSCHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHH
Confidence 3467899999999999999999 6799999977 5688666644
No 73
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=77.79 E-value=2.9 Score=33.10 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=33.3
Q ss_pred CCCCcHHHHHHHHHhHHhcCC-chHHHHHhhcCCCCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~-NsC~iAr~ll~g~KtC~eV~~ 538 (869)
...||+-|-.+++.++..||. |.-.||..| +.+|=.++-.
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL--KGRIGKQCRE 43 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999997 799999987 4577666544
No 74
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.06 E-value=4.4 Score=34.03 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHhHHhcC-CchHHHHHhhcCCCCchHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg-~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
...||+-|-.+++.+|..|| .|.-.||..| +.+|=.++-.
T Consensus 9 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l--~~Rt~~qcr~ 49 (70)
T 2dim_A 9 GGVWRNTEDEILKAAVMKYGKNQWSRIASLL--HRKSAKQCKA 49 (70)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSSCHHHHHHHS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHh--cCCCHHHHHH
Confidence 46799999999999999999 7999999987 5577666644
No 75
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=76.83 E-value=0.61 Score=41.56 Aligned_cols=43 Identities=30% Similarity=0.361 Sum_probs=36.3
Q ss_pred cCCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHH
Q 002895 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYM 540 (869)
Q Consensus 496 ~~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym 540 (869)
....||.-|..+++.++..||.++..||..| +.+|=.+|-.+-
T Consensus 15 ~~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l--~gRt~~q~k~r~ 57 (89)
T 2ltp_A 15 YFQGWTEEEMGTAKKGLLEHGRNWSAIARMV--GSKTVSQCKNFY 57 (89)
Confidence 3568999999999999999999999999987 568877775543
No 76
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=74.63 E-value=3.4 Score=32.92 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=26.9
Q ss_pred CCCcHHHHHHHHHhHHhcC-CchHHHHHhh
Q 002895 498 SEWKPIEKELYLKGVEIFG-RNSCLIARNL 526 (869)
Q Consensus 498 ~~W~~~E~~l~~k~~~ifg-~NsC~iAr~l 526 (869)
..||+-|-.+++.+|..|| .|.-.||..+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~ 32 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHY 32 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHc
Confidence 4699999999999999999 6999999987
No 77
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=74.45 E-value=1.4 Score=38.41 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=40.5
Q ss_pred cCCcccchhhhhHhhhcCCh-HHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 176 EFSDGEDRILWTVFEEHGLG-EEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~s-d~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
..+..|+.+|..+++.|+.. ..-.+.||++| +.|..|++.||++|..
T Consensus 10 ~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp CCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 58999999999999999873 33468999999 5999999999999955
No 78
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=72.86 E-value=5.8 Score=33.21 Aligned_cols=45 Identities=24% Similarity=0.305 Sum_probs=34.2
Q ss_pred CCCCcHHHHHHHHHhHHhcCC-chHHHHHhhcCCCCc---hHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKT---CMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~-NsC~iAr~ll~g~Kt---C~eV~~ym~ 541 (869)
...||+-|-.+++.+|..||. +.-.||+.+-...+| |.+=+.-|.
T Consensus 11 k~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~ 59 (64)
T 3sjm_A 11 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMK 59 (64)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 457999999999999999994 899999975212355 665555444
No 79
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=72.84 E-value=3.7 Score=34.46 Aligned_cols=45 Identities=20% Similarity=0.157 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHhHHhcC-CchHHHHHhhcCCCCc---hHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKT---CMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg-~NsC~iAr~ll~g~Kt---C~eV~~ym~ 541 (869)
...||+-|-.+++.+|+.|| .+.-.||..|-...+| |.+=|..+.
T Consensus 10 r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~~~l 58 (69)
T 1ity_A 10 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHYKFNNRTSVMLKDRWRTMK 58 (69)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcHHHHHHHcCcCCCCHHHHHHHHHHHc
Confidence 46799999999999999999 6999999987200455 554454443
No 80
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=72.03 E-value=2.7 Score=36.43 Aligned_cols=40 Identities=20% Similarity=0.213 Sum_probs=33.3
Q ss_pred cCCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHH
Q 002895 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVST 538 (869)
Q Consensus 496 ~~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ 538 (869)
....||+-|..+++.++..||.+...||+.| | +|=.+|-.
T Consensus 22 ~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l--g-Rt~~q~kn 61 (73)
T 2llk_A 22 HVGKYTPEEIEKLKELRIKHGNDWATIGAAL--G-RSASSVKD 61 (73)
T ss_dssp CCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH--T-SCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh--C-CCHHHHHH
Confidence 4578999999999999999999999999987 2 66555543
No 81
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.62 E-value=4.6 Score=33.52 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=32.4
Q ss_pred cCCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHH
Q 002895 496 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVS 537 (869)
Q Consensus 496 ~~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~ 537 (869)
....||.-|..+++.++..||.+.-.||. |. | +|=.++-
T Consensus 8 ~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~-g-Rt~~qcr 46 (66)
T 2din_A 8 KKTEWSREEEEKLLHLAKLMPTQWRTIAP-II-G-RTAAQCL 46 (66)
T ss_dssp SCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH-S-SCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc-C-cCHHHHH
Confidence 35689999999999999999999999999 43 4 7655553
No 82
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=71.57 E-value=1.8 Score=46.11 Aligned_cols=37 Identities=27% Similarity=0.601 Sum_probs=30.3
Q ss_pred cccCCCCC-----------CCCCCCcccCCCccccCCCccccccCchhhhhcc
Q 002895 616 YTPCGCQS-----------MCGKQCPCLHNGTCCEKYCGYSFLRCSKSCKNRF 657 (869)
Q Consensus 616 y~PC~c~~-----------~C~~~C~C~~~g~~Cek~Cg~~~~~C~~~C~nRf 657 (869)
..-|+|.. .|+.+|.+...-..|...|+ |+..|.||.
T Consensus 63 ~~~C~C~~~~~~~~~~~~~~C~~~C~nr~~~~EC~~~C~-----C~~~C~Nr~ 110 (278)
T 3h6l_A 63 RMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCP-----NGDYCSNRR 110 (278)
T ss_dssp --CCCCCCCCHHHHHHTCCSSCTTCTTGGGTBCCCTTCT-----TGGGCSSCT
T ss_pred cceeeccCCCcccccccCCCCCCCCCCcceEeccCCCCC-----cCCCCCCcc
Confidence 46788863 78889999988899999999 999999884
No 83
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=70.39 E-value=3 Score=35.24 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=40.3
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHH--HHh-cCCcHHHHHHHHHhHhh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVS--QFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~--~~~-~~~~sei~eRy~~L~~k 223 (869)
-++.|++.||..|.--.++||- .=-.|+. .|| ++|.-+|+.||+.|...
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~--~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGN--HWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCS--CHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHhH--hHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 3678999999999999999997 2333443 366 99999999999999885
No 84
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=68.22 E-value=3.3 Score=40.05 Aligned_cols=49 Identities=12% Similarity=0.248 Sum_probs=41.3
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
-.|..|+..||.+|...+++||-.. -..||++| ++++.++++||..+-.
T Consensus 56 ~~~~~Wt~eEd~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 105 (159)
T 1h89_C 56 LIKGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHLN 105 (159)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHCSCC--HHHHHHTSTTCCHHHHHHHHHHTTC
T ss_pred cCCCCCChHHHHHHHHHHHHhCccc--HHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 3477899999999999999999632 56788888 9999999999987643
No 85
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.00 E-value=5.1 Score=33.06 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=40.6
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHh
Q 002895 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (869)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~ 222 (869)
.....|++.|+.++...+..||- -+..||++| ++++.++.++|-.-++
T Consensus 10 ~~~~~WT~eE~~~F~~~~~~~gk---~w~~Ia~~l~~rt~~~~v~~Yy~~Kk 58 (61)
T 2eqr_A 10 QFMNVWTDHEKEIFKDKFIQHPK---NFGLIASYLERKSVPDCVLYYYLTKK 58 (61)
T ss_dssp SCCCSCCHHHHHHHHHHHHHSTT---CHHHHHHHCTTSCHHHHHHHHHHHTC
T ss_pred ccCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHHHhcC
Confidence 35578999999999999999994 388999999 7899999999865443
No 86
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=64.14 E-value=5.1 Score=44.84 Aligned_cols=30 Identities=17% Similarity=-0.049 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCCcEEEEccccCCCCeeEEe
Q 002895 720 QRILLAKSDVAGWGAFLKNSVSKNDYLGEY 749 (869)
Q Consensus 720 k~l~V~kS~~kG~GLFA~edI~KGefI~EY 749 (869)
..|+++.++.+|.||+|+++|++|+.|..-
T Consensus 7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 7 GGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp TTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 679999999999999999999999998754
No 87
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=61.72 E-value=5.8 Score=45.10 Aligned_cols=32 Identities=13% Similarity=0.039 Sum_probs=28.5
Q ss_pred cCcEEEEEcCCCCcEEEEccccCCCCeeEEec
Q 002895 719 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYT 750 (869)
Q Consensus 719 ~k~l~V~kS~~kG~GLFA~edI~KGefI~EY~ 750 (869)
...|+|..++.+|.||+|+++|++|+.|..-.
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~ 37 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAER 37 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEEC
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEecC
Confidence 46799999999999999999999999997543
No 88
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=61.65 E-value=5 Score=35.48 Aligned_cols=46 Identities=24% Similarity=0.247 Sum_probs=36.6
Q ss_pred cCCcccchhhhhHhhhcCChHHHHHHHHH-----HhcCCcHHHHHHHHHhHhh
Q 002895 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQ-----FIGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 176 ~f~~~ed~~~~~~~~e~g~sd~v~~~l~~-----~~~~~~sei~eRy~~L~~k 223 (869)
-|+..||.+|...++.||... -..|++ |-++|.-+|+.||.+|...
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~--W~~I~~~~~~~~~~RT~~~lKdrWrnllk~ 52 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 52 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSC--HHHHHHHHCTTCTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCC--cHHHHHhhccccCCCCHHHHHHHHHHHHHh
Confidence 589999999999999999732 223333 3499999999999999864
No 89
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=60.48 E-value=12 Score=33.67 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHhHHhcC----CchHHHHHhhcCCCCchHHHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYM 540 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg----~NsC~iAr~ll~g~KtC~eV~~ym 540 (869)
...||.-|..+|..++..|| +.+=.||+.| +.||=.||-.+.
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~v--pGRT~~q~k~ry 53 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAV--EGRTPEEVKKHY 53 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS--TTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHHH
Confidence 46799999999999999996 5689999987 558877775543
No 90
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=60.13 E-value=6.2 Score=43.83 Aligned_cols=48 Identities=27% Similarity=0.346 Sum_probs=39.9
Q ss_pred cccCCcccchhhhhHhhhcCC-----hHHHHHHHHHH--------h-cCCcHHHHHHHHHhH
Q 002895 174 KHEFSDGEDRILWTVFEEHGL-----GEEVINAVSQF--------I-GIATSEVQDRYSTLK 221 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~-----sd~v~~~l~~~--------~-~~~~sei~eRy~~L~ 221 (869)
++.|++.||++|=..+-.||+ =|+|-..|... | ++|+.||+.|.+.|-
T Consensus 228 ~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~rRc~tLi 289 (374)
T 2y9y_A 228 KRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLL 289 (374)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 578999999998888888988 67776555543 3 899999999999985
No 91
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=59.80 E-value=9.2 Score=35.31 Aligned_cols=49 Identities=22% Similarity=0.239 Sum_probs=39.1
Q ss_pred ccccCCcccchhhhhHhhhcCChHHHHHHHHH-H----hcCCcHHHHHHHHHhHhh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQ-F----IGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~-~----~~~~~sei~eRy~~L~~k 223 (869)
-+.-||..||.+|...++.||-.. -..|+. + -++|.-+|+.||..|...
T Consensus 12 ~r~~WT~EEd~~L~~gV~k~G~g~--W~~I~~~~~~~f~~RT~v~lKdrWrnllk~ 65 (105)
T 2aje_A 12 IRRPFSVAEVEALVQAVEKLGTGR--WRDVKLCAFEDADHRTYVDLKDKWKTLVHT 65 (105)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCSSS--HHHHHSSSSSSTTCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCC--hHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 467899999999999999999732 223333 2 389999999999999874
No 92
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=58.46 E-value=7.5 Score=43.21 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=27.1
Q ss_pred cCcEEEEEcCCCCcEEEEccccCCCCeeEE
Q 002895 719 QQRILLAKSDVAGWGAFLKNSVSKNDYLGE 748 (869)
Q Consensus 719 ~k~l~V~kS~~kG~GLFA~edI~KGefI~E 748 (869)
...|+.+.++.+|.||+|+++|++|+.|..
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 456888889999999999999999999976
No 93
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=55.76 E-value=8.1 Score=36.59 Aligned_cols=50 Identities=22% Similarity=0.228 Sum_probs=39.7
Q ss_pred cccccCCcccchhhhhHhhhcCChHHHHHHHHHH-----hcCCcHHHHHHHHHhHhh
Q 002895 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQF-----IGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 172 eek~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~-----~~~~~sei~eRy~~L~~k 223 (869)
--+.-|+..||.+|...+++||-.. -..|+.+ -++|.-+|+.||..|...
T Consensus 15 r~r~~WT~EEd~~L~~gV~k~G~G~--W~~Ia~~~~~~f~~RT~v~lKdRWrnllk~ 69 (121)
T 2juh_A 15 RIRRPFSVAEVEALVEAVEHLGTGR--WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 69 (121)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHGGGC--HHHHHHHHCSCCSSCCSHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 4567899999999999999999621 3334443 399999999999999863
No 94
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=55.09 E-value=8.5 Score=31.16 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=28.1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002895 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEK 52 (869)
Q Consensus 22 ~~~~~L~~~i~~LKkqi~~eR~~~ik~k~e~ 52 (869)
+.+..|...+..||.|+=.||+..|+.++++
T Consensus 13 d~l~~LEkqF~~LkEqlY~ERl~ql~~~Lee 43 (49)
T 2xus_A 13 SEMLDLEKQFSELKEKLFRERLSQLRLRLEE 43 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999886
No 95
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=52.60 E-value=9.4 Score=36.20 Aligned_cols=51 Identities=20% Similarity=0.257 Sum_probs=38.8
Q ss_pred ccccCCcccchhhhhHhhhcCCh--HHHHHHHH-HHhcCCcHHHHHHHHHhHhh
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLG--EEVINAVS-QFIGIATSEVQDRYSTLKEK 223 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~s--d~v~~~l~-~~~~~~~sei~eRy~~L~~k 223 (869)
-+.-|+..||.+|...+++||-. -.|+..+- .|-++|.-+|+.||.+|...
T Consensus 30 ~r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 30 IRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 46789999999999999999972 12222211 12399999999999999854
No 96
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=52.53 E-value=11 Score=40.69 Aligned_cols=49 Identities=29% Similarity=0.448 Sum_probs=38.0
Q ss_pred ccccCCcccchhhhhHhhhcCCh-HHHHHHHH------------HHh-cCCcHHHHHHHHHhH
Q 002895 173 EKHEFSDGEDRILWTVFEEHGLG-EEVINAVS------------QFI-GIATSEVQDRYSTLK 221 (869)
Q Consensus 173 ek~~f~~~ed~~~~~~~~e~g~s-d~v~~~l~------------~~~-~~~~sei~eRy~~L~ 221 (869)
-++.|++.||++|=..+..||+. +.+.+.|. =|| ++||.||+.|...|-
T Consensus 211 k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~tLi 273 (304)
T 1ofc_X 211 KGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 273 (304)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 45789999999988889999992 23444443 134 899999999998884
No 97
>2l9z_A PR domain zinc finger protein 4; zinc-binding domain, transcription; NMR {Homo sapiens}
Probab=52.38 E-value=5.5 Score=30.76 Aligned_cols=21 Identities=29% Similarity=0.724 Sum_probs=18.1
Q ss_pred hhccccccccccccc---ccCCcC
Q 002895 251 LDSFDNLFCRRCLLF---DCRLHG 271 (869)
Q Consensus 251 ldsFdnlFCRRClvf---DC~lHg 271 (869)
++..+.|||--|--| +|+.||
T Consensus 6 ~~~~~yl~CE~C~~~~~~~Cp~HG 29 (39)
T 2l9z_A 6 MATLFTIWCTLCDRAYPSDCPEHG 29 (39)
T ss_dssp SCCSCSEEEGGGTEEESSSBTTTB
T ss_pred chhhhhhHHHHHhhhchhhchhcC
Confidence 456789999999877 899999
No 98
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=51.08 E-value=13 Score=33.69 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=38.8
Q ss_pred ccCCcccchhhhhHhhhcCChHHHHHHHHHHh------cCCcHHHHHHHHHhHhh
Q 002895 175 HEFSDGEDRILWTVFEEHGLGEEVINAVSQFI------GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 175 ~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~------~~~~sei~eRy~~L~~k 223 (869)
..++..|+..|--..+++||- +-+|+..+ ++|.++||+||-.+..+
T Consensus 31 ~~WTkEETd~Lf~L~~~fdlR---W~vI~DRy~~~~~~~Rt~EdLK~RyY~v~~~ 82 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDLR---FVVIHDRYDHQQFKKRSVEDLKERYYHICAK 82 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTC---HHHHHHHSCTTTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCC---eeeehhhhccCCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999996 55677777 69999999999777653
No 99
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=50.72 E-value=7.2 Score=31.85 Aligned_cols=26 Identities=31% Similarity=1.055 Sum_probs=20.1
Q ss_pred CCcccCC-------CCccCCCcccccccCccCc
Q 002895 658 RGCHCAK-------SQCRSRQCPCFAAGRECDP 683 (869)
Q Consensus 658 ~GC~C~~-------~~C~t~~CpC~~a~rECdP 683 (869)
++|+|.. ..|....||||..+.-|..
T Consensus 5 ~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~~ 37 (52)
T 2lua_A 5 PKCRCGISGSSNTLTTCRNSRCPCYKSYNSCAG 37 (52)
T ss_dssp CCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCSS
T ss_pred cccccCcccCCCCceeEcCCccceecCCCccCC
Confidence 4566632 2699999999999998864
No 100
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=49.73 E-value=8.5 Score=41.23 Aligned_cols=37 Identities=35% Similarity=0.996 Sum_probs=27.1
Q ss_pred ccCCCC--CCCCC----CCcccCCC----------------------ccccCCCccccccCchhhhhccC
Q 002895 617 TPCGCQ--SMCGK----QCPCLHNG----------------------TCCEKYCGYSFLRCSKSCKNRFR 658 (869)
Q Consensus 617 ~PC~c~--~~C~~----~C~C~~~g----------------------~~Cek~Cg~~~~~C~~~C~nRf~ 658 (869)
.-|+|. +.|.. .|.|.... ..|...|+ |+..|.||..
T Consensus 67 ~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~-----C~~~C~Nr~~ 131 (299)
T 1mvh_A 67 SGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCS-----CSMECPNRVV 131 (299)
T ss_dssp CCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSC-----SCTTCTTCTG
T ss_pred CCCcCcCCCCcCCCCCCCCccccccccccccccCCCCceeecCCCCeEeCCCCCC-----CCCCcCCccc
Confidence 458887 48875 79998643 46777787 8888888753
No 101
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=49.13 E-value=3.6 Score=47.14 Aligned_cols=43 Identities=19% Similarity=0.311 Sum_probs=0.0
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHHh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
...|+..|+.+|..++..||+||-.|++.| ..||-.++-+|..
T Consensus 189 ~d~WT~eE~~lFe~al~~yGKdF~~I~~~l--p~Ksv~e~V~yYY 231 (482)
T 2xag_B 189 PDEWTVEDKVLFEQAFSFHGKTFHRIQQML--PDKSIASLVKFYY 231 (482)
T ss_dssp ---------------------------------------------
T ss_pred ccccCHHHHHHHHHHHHHcCccHHHHHHHc--CCCCHHHHHHHhc
Confidence 358999999999999999999999999866 7899999988765
No 102
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=44.07 E-value=18 Score=30.61 Aligned_cols=40 Identities=13% Similarity=0.263 Sum_probs=31.3
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhh-cCCCCchHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNL-LSGLKTCMEV 536 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~l-l~g~KtC~eV 536 (869)
...||.-|...++.||+.||.+.-.|+..- +...+|...+
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~~W~~I~~~y~f~~~RT~VdL 48 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGNHWNSILWSFPFQKGRRAVDL 48 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSCHHHHHHHSCCCTTCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHhHHHHHHhCCCccCcccchH
Confidence 567999999999999999999999999641 1133665554
No 103
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=40.72 E-value=10 Score=40.36 Aligned_cols=39 Identities=28% Similarity=0.754 Sum_probs=27.8
Q ss_pred cCcccCCCCCCCCC-CCcccCC-----------------------CccccCCCccccccCchhhhhcc
Q 002895 614 KQYTPCGCQSMCGK-QCPCLHN-----------------------GTCCEKYCGYSFLRCSKSCKNRF 657 (869)
Q Consensus 614 ~~y~PC~c~~~C~~-~C~C~~~-----------------------g~~Cek~Cg~~~~~C~~~C~nRf 657 (869)
.++.-|+|.+.|.. .|+|... -..|...|+ |+..|.||.
T Consensus 78 ~~~~gC~C~~~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~-----C~~~C~Nr~ 140 (287)
T 3hna_A 78 THLQYCVCIDDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACS-----CWRNCRNRV 140 (287)
T ss_dssp GGCCCCCCSSSSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSS-----SCTTCSSCS
T ss_pred CCCCCCcCcCCCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCC-----CCCCCCCcc
Confidence 35678999988974 8999741 134666677 777777774
No 104
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=39.26 E-value=22 Score=40.58 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=27.3
Q ss_pred cEEEEEcCCCCcEEEEccccCCCCeeEEeccc
Q 002895 721 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGE 752 (869)
Q Consensus 721 ~l~V~kS~~kG~GLFA~edI~KGefI~EY~GE 752 (869)
.|.+...+..|+||+|+++|++|+.|+..--.
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~ 125 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRK 125 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence 57888888999999999999999998865444
No 105
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=38.94 E-value=51 Score=28.58 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=36.1
Q ss_pred cCCCCcHHHHHHHHHhHHhcCC----chHHHHHhhcCCCCchHHHHHHHh
Q 002895 496 CSSEWKPIEKELYLKGVEIFGR----NSCLIARNLLSGLKTCMEVSTYMR 541 (869)
Q Consensus 496 ~~~~W~~~E~~l~~k~~~ifg~----NsC~iAr~ll~g~KtC~eV~~ym~ 541 (869)
....||..|..+|+.++.+|+. +.=.||+.+ |.||=.||-..-.
T Consensus 7 ~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V--~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV--GSRSPEECQRKYM 54 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHT--TTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHc--CCCCHHHHHHHHH
Confidence 3568999999999999999985 477899877 6699888876443
No 106
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=35.95 E-value=70 Score=27.37 Aligned_cols=43 Identities=21% Similarity=0.343 Sum_probs=35.0
Q ss_pred CCCCcHHHHHHHHHhHHhcC----CchHHHHHhhcCCCCchHHHHHHHhh
Q 002895 497 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYMRD 542 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg----~NsC~iAr~ll~g~KtC~eV~~ym~~ 542 (869)
...||.-|..+|.+++.+|+ +..=.||..| | ||=.||-.+...
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--g-Rt~~eV~~~y~~ 54 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--G-RSVTDVTTKAKQ 54 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--T-SCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--C-CCHHHHHHHHHH
Confidence 45799999999999999997 3577899986 5 898888665543
No 107
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=35.61 E-value=34 Score=31.89 Aligned_cols=42 Identities=19% Similarity=0.282 Sum_probs=34.7
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHHHHHhhcCCCCchHHHHHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYM 540 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~iAr~ll~g~KtC~eV~~ym 540 (869)
...||+-|..+++.++..||.+.-.||+.| +.+|=.+|-.+-
T Consensus 54 ~~~Wt~eEd~~L~~~~~~~G~~W~~Ia~~l--~gRt~~~~k~rw 95 (131)
T 3zqc_A 54 KHAWTPEEDETIFRNYLKLGSKWSVIAKLI--PGRTDNAIKNRW 95 (131)
T ss_dssp CSCCCHHHHHHHHHHHHHSCSCHHHHTTTS--TTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHH
Confidence 457999999999999999999999999876 457766665533
No 108
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=34.42 E-value=27 Score=36.50 Aligned_cols=47 Identities=13% Similarity=0.284 Sum_probs=41.0
Q ss_pred cccCCcccchhhhhHhhhcCChHHHHHHHHHHh-cCCcHHHHHHHHHhHhh
Q 002895 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (869)
Q Consensus 174 k~~f~~~ed~~~~~~~~e~g~sd~v~~~l~~~~-~~~~sei~eRy~~L~~k 223 (869)
..-|++.|+.++-.+++.||-. +..||++| +.|..+|+..|..-+++
T Consensus 133 s~~WTeEE~~lFleAl~kYGKD---W~~IAk~VgTKT~~QcKnfY~~~kKR 180 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRD---FQAISDVIGNKSVVQVKNFFVNYRRR 180 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSC---HHHHHHHHSSCCHHHHHHHHHHTTTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4569999999999999999976 99999999 78889999999766553
No 109
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=32.72 E-value=33 Score=28.30 Aligned_cols=45 Identities=22% Similarity=0.392 Sum_probs=36.8
Q ss_pred ccCCcccchhhhhHhhhcCC------hHHHHHHHHH--HhcCCcHHHHHHHHH
Q 002895 175 HEFSDGEDRILWTVFEEHGL------GEEVINAVSQ--FIGIATSEVQDRYST 219 (869)
Q Consensus 175 ~~f~~~ed~~~~~~~~e~g~------sd~v~~~l~~--~~~~~~sei~eRy~~ 219 (869)
-.|++.||.+|...+.++.. ...+...|++ +-..|-.-..+||..
T Consensus 3 ~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k 55 (59)
T 1fex_A 3 IAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLK 55 (59)
T ss_dssp CCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHH
Confidence 46999999999999999943 4577788887 448888999999954
No 110
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=31.64 E-value=45 Score=26.07 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=25.2
Q ss_pred ccceeeEeCCCCeEEEecCC----ccccCCCccccccCC
Q 002895 144 GRRRIYYDQHGSEALVCSDS----EEDIIEPEEEKHEFS 178 (869)
Q Consensus 144 grrriYYD~~g~EalicSds----eee~~e~eeek~~f~ 178 (869)
|...|-||...|| |||..- +|++++...|=+-|+
T Consensus 12 ~~~~l~~d~~~ge-lvC~~CG~v~~e~~id~~~ewr~f~ 49 (50)
T 1pft_A 12 ESAELIYDPERGE-IVCAKCGYVIEENIIDMGPEWRAFD 49 (50)
T ss_dssp SCCCEEEETTTTE-EEESSSCCBCCCCCCCCCSSSSCCC
T ss_pred CCcceEEcCCCCe-EECcccCCcccccccccCCcccccC
Confidence 3347899999999 999886 455666666677775
No 111
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=31.26 E-value=49 Score=29.13 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=29.9
Q ss_pred CCcHHHHHHHHHhHHhcCC-chHHHHHhh---cCCCCchHHH
Q 002895 499 EWKPIEKELYLKGVEIFGR-NSCLIARNL---LSGLKTCMEV 536 (869)
Q Consensus 499 ~W~~~E~~l~~k~~~ifg~-NsC~iAr~l---l~g~KtC~eV 536 (869)
.||+-|..+++.||+.||. +.-.||+.- | ..+|=.++
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~-~~RT~~~l 42 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMRAFDNA-DHRTYVDL 42 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHHHCTTC-TTSCHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHhhcccc-CCCCHHHH
Confidence 5999999999999999998 999999861 2 34664444
No 112
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=29.92 E-value=39 Score=37.86 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=26.7
Q ss_pred CcEEEEEc-CCCCcEEEEccccCCCCeeEEecccc
Q 002895 720 QRILLAKS-DVAGWGAFLKNSVSKNDYLGEYTGEL 753 (869)
Q Consensus 720 k~l~V~kS-~~kG~GLFA~edI~KGefI~EY~GEI 753 (869)
..|.|... ...|+||||+++|++|+.|+..--.+
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~ 72 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA 72 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence 46777764 46899999999999999998754443
No 113
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=29.06 E-value=32 Score=36.66 Aligned_cols=22 Identities=32% Similarity=0.930 Sum_probs=16.2
Q ss_pred CcccCCCC-CCCC-CCCcccCCCc
Q 002895 615 QYTPCGCQ-SMCG-KQCPCLHNGT 636 (869)
Q Consensus 615 ~y~PC~c~-~~C~-~~C~C~~~g~ 636 (869)
.+.-|+|. +.|. ..|+|...+.
T Consensus 58 ~~~gC~C~~~~C~~~~C~C~~~~~ 81 (290)
T 3bo5_A 58 TFPGCICVKTPCLPGTCSCLRHGE 81 (290)
T ss_dssp CCCCCCCCSSCCCTTTCGGGTTSC
T ss_pred cCCCCCCCCCCcCCCCCcchhhcC
Confidence 35679997 5787 5899987653
No 114
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=27.19 E-value=79 Score=22.76 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 002895 28 TYKLNQLKKQVQAERVVSVKD 48 (869)
Q Consensus 28 ~~~i~~LKkqi~~eR~~~ik~ 48 (869)
..+|..|||+|+..|..+=+.
T Consensus 5 ~sKm~lLKKKIEEQr~i~~~~ 25 (29)
T 3lcn_C 5 ASKMKLLKKKIEEQREILQKT 25 (29)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999888766443
No 115
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=22.72 E-value=99 Score=29.18 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=28.4
Q ss_pred cCCCCcHHHHHHHHHhHHhcCC-chHHHHHhh
Q 002895 496 CSSEWKPIEKELYLKGVEIFGR-NSCLIARNL 526 (869)
Q Consensus 496 ~~~~W~~~E~~l~~k~~~ifg~-NsC~iAr~l 526 (869)
....||.-|..+++.||+.||. +.-.||+.+
T Consensus 16 ~r~~WT~EEd~~L~~gV~k~G~G~W~~Ia~~~ 47 (121)
T 2juh_A 16 IRRPFSVAEVEALVEAVEHLGTGRWRDVKMRA 47 (121)
T ss_dssp SSCCCCHHHHHHHHHHHHHHGGGCHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHh
Confidence 3578999999999999999998 999999986
No 116
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=22.61 E-value=60 Score=35.13 Aligned_cols=44 Identities=27% Similarity=0.375 Sum_probs=37.9
Q ss_pred CCCCcHHHHHHHHHhHHhcCCchHH-HHHhhcCCCCchHHHHHHHhh
Q 002895 497 SSEWKPIEKELYLKGVEIFGRNSCL-IARNLLSGLKTCMEVSTYMRD 542 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~NsC~-iAr~ll~g~KtC~eV~~ym~~ 542 (869)
-..|+.-|-..|.++.+.||++... ||.-+ +.||.-||-+|+..
T Consensus 110 F~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev--~~Kt~eEV~~Y~~v 154 (304)
T 1ofc_X 110 FTAWTKRDFNQFIKANEKYGRDDIDNIAKDV--EGKTPEEVIEYNAV 154 (304)
T ss_dssp CTTCCHHHHHHHHHHHHHHCTTCHHHHTTSS--TTCCHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHHHHhCHHHHHHHHHHh--cCCCHHHHHHHHHH
Confidence 4789999999999999999997655 78765 67999999999864
No 117
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=22.49 E-value=31 Score=35.08 Aligned_cols=38 Identities=26% Similarity=0.623 Sum_probs=25.8
Q ss_pred cCcccCCCCC-------CCCCCCcccCCCccccC-CCccccccCchhhhhc
Q 002895 614 KQYTPCGCQS-------MCGKQCPCLHNGTCCEK-YCGYSFLRCSKSCKNR 656 (869)
Q Consensus 614 ~~y~PC~c~~-------~C~~~C~C~~~g~~Cek-~Cg~~~~~C~~~C~nR 656 (869)
.+...|+|.. .|+.+|.+......|.. .|+ |+..|.||
T Consensus 20 ~~~~~C~C~~~~~~~~~~c~~~C~nr~~~~EC~~~~C~-----C~~~C~Nr 65 (222)
T 3ope_A 20 YEATTCNCKKPDDDTRKGCVDDCLNRMIFAECSPNTCP-----CGEQCCNQ 65 (222)
T ss_dssp CCCCCCCCCCCSCSSSCSSCSCCTTGGGTBCCCTTTCT-----TTTSCSSC
T ss_pred ccCccccCcCCCcCCCCCCcccCcCcCeEeEeCCCCCc-----CCCCCCCc
Confidence 4567788764 36667777777777765 677 77777776
No 118
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=22.30 E-value=33 Score=36.51 Aligned_cols=18 Identities=39% Similarity=1.073 Sum_probs=13.1
Q ss_pred ccCCCCC--CCC-CCCcccCC
Q 002895 617 TPCGCQS--MCG-KQCPCLHN 634 (869)
Q Consensus 617 ~PC~c~~--~C~-~~C~C~~~ 634 (869)
.-|+|.+ .|. ..|.|...
T Consensus 48 ~gC~C~~~~~C~~~~C~C~~~ 68 (302)
T 1ml9_A 48 VGCSCASDEECMYSTCQCLDE 68 (302)
T ss_dssp CCCCCSSTTGGGSTTSGGGTT
T ss_pred CCccCcCCCCcCCCCCcChhh
Confidence 5688876 676 57999764
No 119
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=21.46 E-value=62 Score=30.62 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=31.7
Q ss_pred CCCCcHHHHHHHHHhHHhcCC-chHHHHHhhcC--CCCchHHH
Q 002895 497 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLS--GLKTCMEV 536 (869)
Q Consensus 497 ~~~W~~~E~~l~~k~~~ifg~-NsC~iAr~ll~--g~KtC~eV 536 (869)
...||.-|..+++.||+.||. ++-.||+.++. ..+|=.++
T Consensus 31 r~~WT~EEd~~L~~gV~k~G~g~W~~I~~~~~~~~~~RT~vdl 73 (122)
T 2roh_A 31 RRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDL 73 (122)
T ss_dssp CCCCCHHHHHHHHHHHHHHSSSCHHHHHHHHHSSSCCCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCChHHHHHHhccccCCCCHHHH
Confidence 567999999999999999997 99999997521 23554444
Done!