Query 002897
Match_columns 869
No_of_seqs 937 out of 5811
Neff 9.9
Searched_HMMs 46136
Date Thu Mar 28 13:00:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002897.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002897hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-99 2E-104 938.1 58.7 810 2-867 145-961 (968)
2 PLN00113 leucine-rich repeat r 100.0 5E-56 1.1E-60 549.0 29.3 471 1-477 97-586 (968)
3 KOG1187 Serine/threonine prote 100.0 2.3E-48 4.9E-53 414.9 26.3 289 540-860 61-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 2.3E-47 5E-52 380.1 20.7 252 555-853 80-335 (364)
5 KOG0615 Serine/threonine prote 100.0 2.6E-46 5.6E-51 374.2 16.6 254 553-853 171-437 (475)
6 KOG0595 Serine/threonine-prote 100.0 4.9E-46 1.1E-50 373.3 18.6 202 553-777 9-218 (429)
7 KOG0192 Tyrosine kinase specif 100.0 1.7E-45 3.8E-50 388.8 22.8 260 556-863 43-309 (362)
8 KOG0591 NIMA (never in mitosis 100.0 5.2E-47 1.1E-51 359.9 8.4 262 553-855 18-283 (375)
9 KOG0575 Polo-like serine/threo 100.0 3.8E-45 8.3E-50 385.5 20.8 249 554-853 18-269 (592)
10 KOG0593 Predicted protein kina 100.0 3.4E-45 7.4E-50 351.1 13.3 275 554-852 2-283 (396)
11 KOG0659 Cdk activating kinase 100.0 1E-43 2.2E-48 335.6 17.8 277 554-853 2-281 (318)
12 KOG0197 Tyrosine kinases [Sign 100.0 3.6E-44 7.8E-49 375.0 15.6 258 554-860 206-464 (468)
13 KOG0592 3-phosphoinositide-dep 100.0 9.4E-44 2E-48 367.9 16.5 260 550-852 69-337 (604)
14 KOG4194 Membrane glycoprotein 100.0 1.5E-44 3.2E-49 374.5 10.0 408 12-457 45-457 (873)
15 KOG0661 MAPK related serine/th 100.0 2.5E-44 5.4E-49 366.3 10.8 278 553-853 9-291 (538)
16 KOG0472 Leucine-rich repeat pr 100.0 7.2E-47 1.5E-51 375.5 -10.2 447 2-475 50-541 (565)
17 KOG0472 Leucine-rich repeat pr 100.0 3.2E-47 7E-52 377.9 -12.9 432 1-459 72-547 (565)
18 KOG4194 Membrane glycoprotein 100.0 4.4E-45 9.4E-50 378.4 2.1 387 2-424 57-448 (873)
19 KOG0598 Ribosomal protein S6 k 100.0 8E-43 1.7E-47 347.7 17.2 243 553-845 24-269 (357)
20 KOG0600 Cdc2-related protein k 100.0 1.1E-42 2.4E-47 357.1 17.0 278 554-852 117-399 (560)
21 KOG0198 MEKK and related serin 100.0 2.7E-42 5.8E-47 352.3 18.7 262 553-856 16-279 (313)
22 KOG0582 Ste20-like serine/thre 100.0 9.7E-42 2.1E-46 344.7 20.3 266 552-852 24-292 (516)
23 KOG0578 p21-activated serine/t 100.0 2.9E-42 6.3E-47 360.7 16.1 250 554-852 273-522 (550)
24 KOG1026 Nerve growth factor re 100.0 4.4E-42 9.5E-47 376.9 15.8 268 553-862 485-767 (774)
25 KOG2345 Serine/threonine prote 100.0 1.2E-42 2.6E-47 325.0 9.7 278 552-857 19-300 (302)
26 KOG0193 Serine/threonine prote 100.0 3.8E-42 8.3E-47 360.3 14.6 268 547-861 385-657 (678)
27 KOG0660 Mitogen-activated prot 100.0 1.2E-41 2.7E-46 337.6 15.7 284 552-852 20-309 (359)
28 KOG0597 Serine-threonine prote 100.0 1.3E-41 2.8E-46 351.6 14.3 247 554-852 2-250 (808)
29 KOG0663 Protein kinase PITSLRE 100.0 4E-41 8.7E-46 327.7 16.3 278 553-852 75-360 (419)
30 KOG0658 Glycogen synthase kina 100.0 1.5E-41 3.2E-46 337.8 10.5 278 554-852 24-305 (364)
31 KOG0588 Serine/threonine prote 100.0 8.9E-41 1.9E-45 352.9 17.0 250 553-854 11-264 (786)
32 KOG0583 Serine/threonine prote 100.0 3.6E-40 7.8E-45 352.5 21.7 251 551-852 14-274 (370)
33 cd05102 PTKc_VEGFR3 Catalytic 100.0 4E-40 8.7E-45 358.0 20.8 268 553-860 6-337 (338)
34 KOG1989 ARK protein kinase fam 100.0 1.5E-40 3.2E-45 367.1 16.4 273 553-861 36-315 (738)
35 KOG4721 Serine/threonine prote 100.0 7.7E-41 1.7E-45 345.5 12.1 242 559-859 129-370 (904)
36 KOG0201 Serine/threonine prote 100.0 4.1E-41 9E-46 340.4 9.2 249 554-852 13-262 (467)
37 KOG0605 NDR and related serine 100.0 5.8E-40 1.3E-44 340.5 18.0 258 552-851 139-443 (550)
38 KOG0616 cAMP-dependent protein 100.0 5.8E-40 1.3E-44 314.9 15.3 199 553-776 43-244 (355)
39 KOG3653 Transforming growth fa 100.0 1.1E-39 2.4E-44 332.2 17.4 273 554-862 210-508 (534)
40 KOG0585 Ca2+/calmodulin-depend 100.0 1.3E-39 2.9E-44 331.2 17.8 265 550-856 93-375 (576)
41 KOG0594 Protein kinase PCTAIRE 100.0 3.3E-39 7.1E-44 322.4 19.3 284 554-853 11-302 (323)
42 KOG0196 Tyrosine kinase, EPH ( 100.0 3.5E-40 7.5E-45 353.5 12.2 260 555-860 630-894 (996)
43 KOG0611 Predicted serine/threo 100.0 9.5E-40 2.1E-44 324.4 14.4 249 554-855 53-305 (668)
44 PHA02988 hypothetical protein; 100.0 7.3E-39 1.6E-43 337.9 21.9 252 559-859 25-281 (283)
45 KOG0589 Serine/threonine prote 100.0 1.1E-39 2.3E-44 340.9 14.8 253 554-853 4-258 (426)
46 KOG1095 Protein tyrosine kinas 100.0 1.5E-39 3.2E-44 370.6 17.0 268 555-864 693-968 (1025)
47 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.4E-39 1.2E-43 349.7 19.1 282 555-853 1-290 (338)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-38 3.8E-43 336.1 22.3 251 556-852 2-260 (285)
49 KOG0580 Serine/threonine prote 100.0 1.2E-39 2.5E-44 303.8 11.3 252 552-854 20-274 (281)
50 cd05571 STKc_PKB Catalytic dom 100.0 8.9E-39 1.9E-43 344.4 20.1 242 560-852 1-250 (323)
51 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-38 8.1E-43 340.8 24.4 200 553-775 4-204 (331)
52 KOG0194 Protein tyrosine kinas 100.0 1.2E-38 2.6E-43 339.9 19.2 263 553-863 156-426 (474)
53 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4E-38 8.7E-43 336.7 23.4 274 553-852 4-287 (303)
54 cd05612 STKc_PRKX_like Catalyt 100.0 6.7E-39 1.5E-43 340.2 17.0 246 554-853 1-254 (291)
55 cd05096 PTKc_DDR1 Catalytic do 100.0 3.4E-38 7.3E-43 337.6 21.8 268 553-855 4-303 (304)
56 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.7E-38 5.9E-43 342.5 21.3 254 554-853 1-257 (333)
57 cd05104 PTKc_Kit Catalytic dom 100.0 2.5E-38 5.5E-43 347.1 21.2 264 553-857 34-374 (375)
58 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.6E-38 5.7E-43 335.3 20.6 275 554-852 5-284 (288)
59 cd07862 STKc_CDK6 Catalytic do 100.0 6.5E-38 1.4E-42 333.3 23.1 275 554-852 1-286 (290)
60 cd07848 STKc_CDKL5 Catalytic d 100.0 2.8E-38 6.1E-43 335.6 20.0 278 554-852 1-283 (287)
61 cd05106 PTKc_CSF-1R Catalytic 100.0 2.7E-38 5.8E-43 346.5 20.4 265 553-858 37-373 (374)
62 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-40 3.7E-45 309.0 2.5 254 552-853 9-267 (355)
63 KOG2052 Activin A type IB rece 100.0 1.7E-37 3.7E-42 313.9 24.1 274 552-859 209-505 (513)
64 PTZ00263 protein kinase A cata 100.0 1.7E-38 3.8E-43 342.8 18.1 246 553-852 17-270 (329)
65 cd05595 STKc_PKB_beta Catalyti 100.0 3.7E-38 8E-43 339.3 20.2 242 560-852 1-250 (323)
66 cd06650 PKc_MEK1 Catalytic dom 100.0 9.3E-38 2E-42 337.5 23.3 201 553-776 4-205 (333)
67 KOG0599 Phosphorylase kinase g 100.0 6.5E-39 1.4E-43 303.0 12.1 256 550-853 13-283 (411)
68 cd05593 STKc_PKB_gamma Catalyt 100.0 4.9E-38 1.1E-42 338.9 20.6 243 560-853 1-251 (328)
69 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.1E-37 2.3E-42 326.8 22.2 257 553-857 4-265 (266)
70 cd05585 STKc_YPK1_like Catalyt 100.0 3.2E-38 6.9E-43 338.5 18.6 240 562-852 1-246 (312)
71 PHA03212 serine/threonine kina 100.0 1.1E-37 2.3E-42 342.5 22.2 271 554-852 92-375 (391)
72 cd05093 PTKc_TrkB Catalytic do 100.0 3E-37 6.4E-42 327.5 24.0 269 554-864 5-286 (288)
73 KOG4279 Serine/threonine prote 100.0 1.5E-38 3.2E-43 335.2 13.4 245 561-852 582-831 (1226)
74 cd08228 STKc_Nek6 Catalytic do 100.0 2.5E-37 5.4E-42 324.6 22.9 262 554-858 2-266 (267)
75 PLN00034 mitogen-activated pro 100.0 1.2E-37 2.7E-42 340.0 21.0 249 554-853 74-328 (353)
76 PTZ00426 cAMP-dependent protei 100.0 5.6E-38 1.2E-42 339.2 18.1 247 553-853 29-284 (340)
77 KOG4257 Focal adhesion tyrosin 100.0 3.9E-38 8.5E-43 328.8 16.0 257 554-859 389-651 (974)
78 KOG0694 Serine/threonine prote 100.0 2.6E-38 5.7E-43 337.6 15.1 245 551-847 365-613 (694)
79 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.9E-37 4.1E-42 328.7 21.6 276 554-857 4-283 (284)
80 cd05108 PTKc_EGFR Catalytic do 100.0 1.9E-37 4.1E-42 333.5 21.8 260 554-861 7-272 (316)
81 cd05048 PTKc_Ror Catalytic Dom 100.0 3.1E-37 6.8E-42 326.9 23.0 261 554-856 5-282 (283)
82 cd05054 PTKc_VEGFR Catalytic d 100.0 1.3E-37 2.7E-42 336.6 20.3 267 553-859 6-335 (337)
83 cd05599 STKc_NDR_like Catalyti 100.0 1.8E-37 3.9E-42 340.7 21.4 259 554-852 1-295 (364)
84 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.7E-37 3.6E-42 340.9 21.1 267 552-859 35-399 (400)
85 cd05594 STKc_PKB_alpha Catalyt 100.0 7.9E-38 1.7E-42 337.5 18.0 243 560-853 1-252 (325)
86 cd05589 STKc_PKN Catalytic dom 100.0 1.5E-37 3.2E-42 335.2 19.9 245 556-852 1-256 (324)
87 cd05052 PTKc_Abl Catalytic dom 100.0 4.4E-37 9.6E-42 321.7 22.8 256 554-857 6-262 (263)
88 PTZ00267 NIMA-related protein 100.0 2.4E-37 5.2E-42 349.5 22.2 254 555-852 68-322 (478)
89 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-37 4.9E-42 341.2 21.4 260 555-853 2-305 (381)
90 PTZ00283 serine/threonine prot 100.0 2E-37 4.3E-42 349.8 20.9 265 550-853 28-297 (496)
91 KOG0574 STE20-like serine/thre 100.0 1.2E-39 2.7E-44 311.6 2.4 249 556-853 35-283 (502)
92 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-37 7.9E-42 326.2 21.6 273 555-858 4-282 (283)
93 cd07863 STKc_CDK4 Catalytic do 100.0 5E-37 1.1E-41 326.2 22.6 278 555-852 1-284 (288)
94 cd06646 STKc_MAP4K5 Catalytic 100.0 3.4E-37 7.3E-42 323.6 21.0 256 553-854 8-266 (267)
95 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-37 9.4E-42 331.7 22.4 242 560-847 1-250 (329)
96 cd05588 STKc_aPKC Catalytic do 100.0 4.3E-37 9.3E-42 332.0 22.3 247 560-852 1-261 (329)
97 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-37 5E-42 338.8 20.3 255 552-853 41-304 (370)
98 cd05111 PTK_HER3 Pseudokinase 100.0 6.9E-37 1.5E-41 323.0 23.2 259 554-860 7-271 (279)
99 KOG0584 Serine/threonine prote 100.0 2.9E-38 6.2E-43 334.0 12.3 247 558-852 44-295 (632)
100 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.3E-37 1.4E-41 319.3 22.3 251 554-854 4-255 (256)
101 KOG0667 Dual-specificity tyros 100.0 1.4E-37 3E-42 332.6 17.4 198 554-776 186-391 (586)
102 cd05628 STKc_NDR1 Catalytic do 100.0 5.6E-37 1.2E-41 335.9 22.8 208 554-775 1-238 (363)
103 cd05049 PTKc_Trk Catalytic dom 100.0 5.4E-37 1.2E-41 324.6 21.9 261 553-855 4-279 (280)
104 cd05592 STKc_nPKC_theta_delta 100.0 3.4E-37 7.4E-42 330.7 20.5 241 560-851 1-246 (316)
105 PTZ00036 glycogen synthase kin 100.0 1.5E-37 3.2E-42 347.0 18.3 279 553-852 65-350 (440)
106 cd06654 STKc_PAK1 Catalytic do 100.0 5.1E-37 1.1E-41 326.7 21.6 251 554-853 20-270 (296)
107 cd05590 STKc_nPKC_eta Catalyti 100.0 5.4E-37 1.2E-41 329.8 21.9 237 560-847 1-241 (320)
108 cd05035 PTKc_Axl_like Catalyti 100.0 1.4E-36 3.1E-41 320.1 24.8 265 556-857 1-272 (273)
109 cd05094 PTKc_TrkC Catalytic do 100.0 9.5E-37 2.1E-41 324.2 23.5 267 554-862 5-287 (291)
110 cd05591 STKc_nPKC_epsilon Cata 100.0 2.8E-37 6.1E-42 332.6 19.3 243 560-853 1-254 (321)
111 cd05587 STKc_cPKC Catalytic do 100.0 2.9E-37 6.2E-42 333.0 19.3 242 555-847 1-246 (324)
112 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-36 3E-41 320.0 23.9 265 556-857 1-271 (272)
113 cd05062 PTKc_IGF-1R Catalytic 100.0 7.2E-37 1.6E-41 322.8 21.7 262 552-855 4-276 (277)
114 cd05584 STKc_p70S6K Catalytic 100.0 4.9E-37 1.1E-41 330.8 20.8 243 559-852 1-255 (323)
115 cd05605 STKc_GRK4_like Catalyt 100.0 5.2E-37 1.1E-41 324.9 20.6 253 555-853 1-261 (285)
116 cd05621 STKc_ROCK2 Catalytic d 100.0 5.5E-37 1.2E-41 335.3 21.4 257 550-853 39-304 (370)
117 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.7E-37 5.8E-42 323.2 18.2 257 552-857 4-261 (261)
118 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.2E-37 6.9E-42 337.3 19.5 260 554-853 1-285 (350)
119 cd05608 STKc_GRK1 Catalytic do 100.0 6.7E-37 1.5E-41 323.1 21.3 248 562-852 1-256 (280)
120 PRK13184 pknD serine/threonine 100.0 6.5E-37 1.4E-41 352.4 22.5 274 554-861 2-294 (932)
121 cd05607 STKc_GRK7 Catalytic do 100.0 8.3E-37 1.8E-41 321.9 21.6 248 562-854 1-251 (277)
122 cd05084 PTKc_Fes Catalytic dom 100.0 6.2E-37 1.3E-41 318.6 20.3 249 560-855 1-251 (252)
123 cd05629 STKc_NDR_like_fungal C 100.0 6.8E-37 1.5E-41 337.3 21.8 260 554-853 1-305 (377)
124 KOG4278 Protein tyrosine kinas 100.0 9E-38 1.9E-42 325.3 13.7 265 547-859 260-525 (1157)
125 cd05601 STKc_CRIK Catalytic do 100.0 3.1E-37 6.8E-42 334.0 18.7 252 554-852 1-262 (330)
126 PF07714 Pkinase_Tyr: Protein 100.0 1.8E-37 4E-42 323.2 16.1 251 558-854 3-259 (259)
127 cd05614 STKc_MSK2_N N-terminal 100.0 6.8E-37 1.5E-41 331.6 21.2 252 555-852 1-266 (332)
128 cd05033 PTKc_EphR Catalytic do 100.0 2.3E-36 5E-41 317.0 24.1 258 553-857 3-265 (266)
129 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-36 2.5E-41 319.6 21.8 262 554-858 2-266 (267)
130 KOG0610 Putative serine/threon 100.0 4.6E-37 9.9E-42 308.6 17.5 260 554-852 77-391 (459)
131 cd05616 STKc_cPKC_beta Catalyt 100.0 5.5E-37 1.2E-41 330.6 19.7 242 555-847 1-246 (323)
132 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-36 2.7E-41 318.2 21.7 255 553-856 5-260 (261)
133 cd05619 STKc_nPKC_theta Cataly 100.0 6.6E-37 1.4E-41 328.3 20.1 242 560-852 1-247 (316)
134 cd05570 STKc_PKC Catalytic dom 100.0 5.4E-37 1.2E-41 329.7 19.4 242 560-852 1-251 (318)
135 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.8E-37 1.7E-41 327.7 20.6 275 554-852 6-285 (309)
136 cd05598 STKc_LATS Catalytic do 100.0 5.9E-37 1.3E-41 337.9 20.0 260 554-853 1-301 (376)
137 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-36 2.7E-41 321.4 21.6 262 553-862 6-273 (279)
138 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-36 5E-41 315.2 23.3 251 555-853 1-253 (256)
139 cd06645 STKc_MAP4K3 Catalytic 100.0 9.7E-37 2.1E-41 320.1 20.4 254 553-852 8-264 (267)
140 cd05625 STKc_LATS1 Catalytic d 100.0 7.2E-37 1.6E-41 337.8 20.3 207 555-775 2-250 (382)
141 cd05620 STKc_nPKC_delta Cataly 100.0 7.7E-37 1.7E-41 328.0 19.9 241 560-851 1-246 (316)
142 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.7E-36 8E-41 315.8 24.5 262 554-858 2-266 (267)
143 cd05575 STKc_SGK Catalytic dom 100.0 1.3E-36 2.9E-41 327.7 21.5 238 560-848 1-242 (323)
144 KOG1094 Discoidin domain recep 100.0 2.1E-37 4.6E-42 321.6 14.5 264 554-857 538-804 (807)
145 cd05088 PTKc_Tie2 Catalytic do 100.0 1.9E-36 4.1E-41 323.5 22.4 268 553-865 6-288 (303)
146 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.8E-36 6.1E-41 319.5 23.3 274 555-857 5-283 (284)
147 cd05089 PTKc_Tie1 Catalytic do 100.0 3.2E-36 7E-41 321.0 23.9 265 554-863 2-281 (297)
148 cd07876 STKc_JNK2 Catalytic do 100.0 1.4E-36 2.9E-41 332.8 21.5 204 552-776 19-225 (359)
149 cd06637 STKc_TNIK Catalytic do 100.0 9.7E-37 2.1E-41 321.1 19.5 259 551-852 3-268 (272)
150 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-36 4.7E-41 322.1 21.9 266 551-858 9-292 (293)
151 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.8E-36 3.9E-41 315.6 20.7 251 554-854 4-255 (256)
152 cd08219 STKc_Nek3 Catalytic do 100.0 2.5E-36 5.4E-41 314.6 21.8 251 555-853 1-252 (255)
153 cd05622 STKc_ROCK1 Catalytic d 100.0 1.3E-36 2.9E-41 332.7 20.7 261 546-854 35-305 (371)
154 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-36 3E-41 334.2 20.8 281 555-853 1-288 (372)
155 cd06656 STKc_PAK3 Catalytic do 100.0 1.7E-36 3.6E-41 322.9 20.7 251 553-852 18-268 (297)
156 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.4E-36 7.4E-41 316.2 22.8 259 553-857 4-267 (268)
157 cd05602 STKc_SGK1 Catalytic do 100.0 8.4E-37 1.8E-41 329.5 18.5 243 560-853 1-247 (325)
158 cd05115 PTKc_Zap-70 Catalytic 100.0 4.3E-36 9.4E-41 312.7 23.3 250 561-857 2-255 (257)
159 cd06625 STKc_MEKK3_like Cataly 100.0 2.7E-36 5.8E-41 316.1 21.8 254 554-853 2-260 (263)
160 KOG0032 Ca2+/calmodulin-depend 100.0 1.5E-36 3.3E-41 323.9 20.1 253 552-853 33-293 (382)
161 KOG0618 Serine/threonine phosp 100.0 6.4E-40 1.4E-44 358.6 -6.1 437 2-475 50-489 (1081)
162 cd05090 PTKc_Ror1 Catalytic do 100.0 3.1E-36 6.8E-41 319.0 22.2 261 554-856 5-282 (283)
163 cd05068 PTKc_Frk_like Catalyti 100.0 4.5E-36 9.8E-41 313.8 23.1 255 553-856 5-260 (261)
164 cd05615 STKc_cPKC_alpha Cataly 100.0 1.5E-36 3.3E-41 326.8 19.9 242 555-847 1-246 (323)
165 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-36 5.1E-41 328.3 21.4 268 553-860 6-342 (343)
166 cd06638 STKc_myosinIIIA Cataly 100.0 2.8E-36 6.1E-41 320.1 21.5 270 544-853 8-283 (286)
167 cd05116 PTKc_Syk Catalytic dom 100.0 4.5E-36 9.8E-41 312.9 22.6 248 561-856 2-254 (257)
168 cd05617 STKc_aPKC_zeta Catalyt 100.0 3E-36 6.4E-41 325.1 21.9 243 560-848 1-249 (327)
169 cd05071 PTKc_Src Catalytic dom 100.0 3.4E-36 7.4E-41 314.6 21.7 255 553-857 5-260 (262)
170 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-36 3.8E-41 331.5 20.4 204 551-775 14-220 (355)
171 cd06643 STKc_SLK Catalytic dom 100.0 3.1E-36 6.8E-41 318.8 21.6 251 556-853 7-262 (282)
172 cd06619 PKc_MKK5 Catalytic dom 100.0 4E-36 8.6E-41 317.3 22.3 250 554-853 1-253 (279)
173 cd06655 STKc_PAK2 Catalytic do 100.0 2.1E-36 4.6E-41 321.7 20.4 250 554-852 19-268 (296)
174 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.5E-36 7.7E-41 317.4 21.8 261 553-855 5-276 (277)
175 cd05055 PTKc_PDGFR Catalytic d 100.0 3.2E-36 7E-41 321.3 21.7 260 553-857 34-301 (302)
176 cd05082 PTKc_Csk Catalytic dom 100.0 4.7E-36 1E-40 312.7 22.3 250 554-857 6-256 (256)
177 cd05060 PTKc_Syk_like Catalyti 100.0 5.9E-36 1.3E-40 312.1 23.0 251 560-858 1-256 (257)
178 cd05604 STKc_SGK3 Catalytic do 100.0 1.9E-36 4.2E-41 326.7 19.9 242 560-852 1-246 (325)
179 cd05582 STKc_RSK_N N-terminal 100.0 7.1E-37 1.5E-41 329.2 16.4 239 560-849 2-245 (318)
180 cd05092 PTKc_TrkA Catalytic do 100.0 4.3E-36 9.3E-41 317.2 22.1 260 554-855 5-279 (280)
181 cd05065 PTKc_EphR_B Catalytic 100.0 5.4E-36 1.2E-40 314.8 22.7 260 554-857 4-268 (269)
182 cd06615 PKc_MEK Catalytic doma 100.0 5.4E-36 1.2E-40 320.7 22.8 276 554-855 1-289 (308)
183 KOG0444 Cytoskeletal regulator 100.0 1.9E-39 4.2E-44 338.3 -3.8 380 2-447 12-394 (1255)
184 cd06624 STKc_ASK Catalytic dom 100.0 8.2E-36 1.8E-40 313.2 23.6 256 550-852 4-264 (268)
185 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-36 7.4E-41 313.7 20.6 251 554-854 4-255 (256)
186 cd07875 STKc_JNK1 Catalytic do 100.0 2.5E-36 5.4E-41 331.3 20.5 280 552-853 22-318 (364)
187 cd05045 PTKc_RET Catalytic dom 100.0 6.6E-36 1.4E-40 317.7 23.1 263 555-859 1-288 (290)
188 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.7E-36 1.2E-40 317.5 22.5 275 554-857 4-283 (284)
189 cd08227 PK_STRAD_alpha Pseudok 100.0 4.7E-36 1E-40 324.2 22.1 281 558-852 2-306 (327)
190 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.9E-36 6.3E-41 330.8 20.8 266 552-858 35-400 (401)
191 PTZ00284 protein kinase; Provi 100.0 2.6E-36 5.7E-41 341.4 21.1 204 547-776 122-348 (467)
192 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-36 5.8E-41 319.6 19.8 261 554-856 5-282 (283)
193 cd06613 STKc_MAP4K3_like Catal 100.0 6.2E-36 1.3E-40 313.2 22.3 254 554-852 3-259 (262)
194 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.3E-36 1.6E-40 312.0 22.7 254 553-856 5-259 (260)
195 cd05101 PTKc_FGFR2 Catalytic d 100.0 9.6E-36 2.1E-40 318.6 24.1 267 552-860 13-299 (304)
196 cd05603 STKc_SGK2 Catalytic do 100.0 5.2E-36 1.1E-40 322.9 22.1 238 560-848 1-242 (321)
197 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.7E-36 5.8E-41 328.6 20.0 279 552-853 13-298 (343)
198 cd05066 PTKc_EphR_A Catalytic 100.0 7.7E-36 1.7E-40 313.1 22.8 259 553-857 3-266 (267)
199 cd05627 STKc_NDR2 Catalytic do 100.0 2.7E-36 5.8E-41 330.4 20.1 208 554-775 1-238 (360)
200 cd05061 PTKc_InsR Catalytic do 100.0 5.2E-36 1.1E-40 318.0 21.7 267 552-860 4-281 (288)
201 cd06644 STKc_STK10_LOK Catalyt 100.0 5.6E-36 1.2E-40 318.5 21.9 252 554-852 12-268 (292)
202 PTZ00266 NIMA-related protein 100.0 2E-36 4.3E-41 349.6 19.7 260 551-852 10-294 (1021)
203 cd05630 STKc_GRK6 Catalytic do 100.0 6E-36 1.3E-40 316.6 21.9 252 555-852 1-260 (285)
204 KOG0604 MAP kinase-activated p 100.0 5.1E-37 1.1E-41 294.4 12.2 258 552-852 59-321 (400)
205 KOG0577 Serine/threonine prote 100.0 2.2E-37 4.7E-42 321.3 10.4 244 556-852 28-277 (948)
206 KOG4717 Serine/threonine prote 100.0 1.2E-36 2.5E-41 311.0 15.5 250 552-852 16-269 (864)
207 cd07861 STKc_CDK1_euk Catalyti 100.0 4.2E-36 9E-41 318.7 20.5 277 555-852 1-281 (285)
208 cd05097 PTKc_DDR_like Catalyti 100.0 6.7E-36 1.5E-40 318.3 22.0 267 554-855 5-294 (295)
209 cd05032 PTKc_InsR_like Catalyt 100.0 5.8E-36 1.3E-40 316.1 21.3 261 553-855 5-276 (277)
210 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.8E-36 1.7E-40 319.7 22.6 267 553-861 17-303 (307)
211 cd06612 STKc_MST1_2 Catalytic 100.0 5.6E-36 1.2E-40 312.3 20.7 250 554-852 3-252 (256)
212 cd06639 STKc_myosinIIIB Cataly 100.0 4.3E-36 9.3E-41 319.4 20.2 269 544-852 12-286 (291)
213 cd05095 PTKc_DDR2 Catalytic do 100.0 7E-36 1.5E-40 318.4 21.9 267 554-855 5-295 (296)
214 cd05058 PTKc_Met_Ron Catalytic 100.0 7.6E-36 1.6E-40 312.4 21.7 256 560-859 1-261 (262)
215 cd06611 STKc_SLK_like Catalyti 100.0 3.1E-36 6.8E-41 318.6 18.8 254 553-853 4-262 (280)
216 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.2E-35 2.7E-40 319.1 23.7 267 553-861 11-297 (314)
217 PF00069 Pkinase: Protein kina 100.0 2.6E-36 5.7E-41 315.7 18.0 253 556-852 1-256 (260)
218 KOG0444 Cytoskeletal regulator 100.0 8.3E-39 1.8E-43 333.6 -1.0 373 44-458 5-381 (1255)
219 cd05056 PTKc_FAK Catalytic dom 100.0 6.9E-36 1.5E-40 314.2 21.2 258 554-860 6-268 (270)
220 cd05039 PTKc_Csk_like Catalyti 100.0 1.2E-35 2.5E-40 309.8 22.8 251 553-857 5-256 (256)
221 cd05597 STKc_DMPK_like Catalyt 100.0 9.5E-36 2.1E-40 321.8 22.8 202 554-775 1-210 (331)
222 cd05051 PTKc_DDR Catalytic dom 100.0 8.7E-36 1.9E-40 318.1 22.0 268 553-855 4-295 (296)
223 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.8E-36 1E-40 320.5 19.9 275 554-852 6-285 (301)
224 cd06640 STKc_MST4 Catalytic do 100.0 1.4E-35 3E-40 312.9 23.1 249 554-853 4-253 (277)
225 cd05050 PTKc_Musk Catalytic do 100.0 9E-36 1.9E-40 316.4 21.7 261 553-855 4-287 (288)
226 PHA03211 serine/threonine kina 100.0 6.1E-36 1.3E-40 331.7 21.1 275 553-853 168-455 (461)
227 cd05632 STKc_GRK5 Catalytic do 100.0 9.2E-36 2E-40 315.3 21.4 252 556-853 2-261 (285)
228 cd07868 STKc_CDK8 Catalytic do 100.0 9E-36 1.9E-40 321.0 21.6 204 559-776 6-219 (317)
229 KOG0596 Dual specificity; seri 100.0 1.2E-36 2.6E-41 315.1 13.9 254 552-852 359-626 (677)
230 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-35 3.2E-40 309.7 22.3 254 553-856 5-259 (260)
231 cd08223 STKc_Nek4 Catalytic do 100.0 2.2E-35 4.7E-40 308.1 23.4 251 555-852 1-253 (257)
232 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-35 2.8E-40 313.9 21.8 268 552-860 4-279 (280)
233 cd06609 STKc_MST3_like Catalyt 100.0 1.5E-35 3.2E-40 312.4 22.2 249 554-852 1-250 (274)
234 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-35 5E-40 307.6 23.3 251 555-853 1-253 (256)
235 KOG1025 Epidermal growth facto 100.0 1.8E-36 4E-41 325.8 15.3 258 555-860 697-960 (1177)
236 cd06636 STKc_MAP4K4_6 Catalyti 100.0 9.1E-36 2E-40 315.4 20.3 265 545-852 7-278 (282)
237 cd05047 PTKc_Tie Catalytic dom 100.0 2.2E-35 4.7E-40 310.1 22.9 254 560-858 1-269 (270)
238 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-35 2.5E-40 317.5 21.1 261 553-861 6-272 (303)
239 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-35 2.8E-40 310.1 21.0 253 554-856 6-259 (260)
240 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-35 3E-40 315.0 21.3 275 554-852 1-282 (286)
241 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.7E-35 3.6E-40 310.8 21.7 254 555-852 1-263 (267)
242 cd06651 STKc_MEKK3 Catalytic d 100.0 2.5E-35 5.4E-40 309.1 22.9 254 554-852 2-260 (266)
243 PHA03209 serine/threonine kina 100.0 6E-36 1.3E-40 326.5 18.9 194 551-773 63-256 (357)
244 cd07849 STKc_ERK1_2_like Catal 100.0 6.2E-36 1.3E-40 324.6 18.9 284 553-853 4-292 (336)
245 cd07839 STKc_CDK5 Catalytic do 100.0 4.2E-36 9.1E-41 318.4 17.2 271 555-852 1-280 (284)
246 cd05057 PTKc_EGFR_like Catalyt 100.0 2.7E-35 5.9E-40 311.2 22.8 260 553-860 6-271 (279)
247 cd05085 PTKc_Fer Catalytic dom 100.0 3.3E-35 7.2E-40 305.3 23.1 247 560-855 1-249 (250)
248 cd05624 STKc_MRCK_beta Catalyt 100.0 1.1E-35 2.3E-40 321.4 20.1 202 554-775 1-210 (331)
249 cd00192 PTKc Catalytic domain 100.0 2.9E-35 6.4E-40 308.1 22.8 254 560-855 1-262 (262)
250 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.5E-35 5.4E-40 309.6 22.0 257 560-855 1-268 (269)
251 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.7E-35 5.7E-40 319.3 22.9 267 553-861 11-297 (334)
252 cd05586 STKc_Sck1_like Catalyt 100.0 7.5E-36 1.6E-40 323.0 18.5 241 562-852 1-252 (330)
253 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-35 2.8E-40 312.0 19.7 239 561-854 2-273 (274)
254 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.4E-35 5.2E-40 308.0 21.5 240 560-854 1-261 (262)
255 cd06608 STKc_myosinIII_like Ca 100.0 1.6E-35 3.4E-40 312.6 20.2 262 551-852 3-271 (275)
256 cd06631 STKc_YSK4 Catalytic do 100.0 4.9E-35 1.1E-39 306.8 23.5 255 555-852 1-261 (265)
257 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-35 4.3E-40 319.6 21.1 256 554-853 1-266 (332)
258 cd06652 STKc_MEKK2 Catalytic d 100.0 4E-35 8.6E-40 307.4 22.5 254 554-852 2-260 (265)
259 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-35 3.6E-40 313.6 19.7 257 553-854 4-267 (284)
260 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.5E-36 1.4E-40 311.8 16.3 240 560-854 1-257 (258)
261 cd08218 STKc_Nek1 Catalytic do 100.0 3.7E-35 8.1E-40 306.0 22.0 250 555-852 1-252 (256)
262 cd05040 PTKc_Ack_like Catalyti 100.0 2.1E-35 4.6E-40 308.1 20.1 251 560-855 1-256 (257)
263 KOG0579 Ste20-like serine/thre 100.0 8.7E-37 1.9E-41 318.6 9.1 251 555-852 33-288 (1187)
264 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-35 3.6E-40 314.2 19.1 250 555-853 23-272 (292)
265 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-35 2.5E-40 313.6 17.6 248 555-853 5-253 (277)
266 PHA03207 serine/threonine kina 100.0 2.5E-35 5.4E-40 325.8 21.0 275 553-853 91-375 (392)
267 cd07841 STKc_CDK7 Catalytic do 100.0 3.7E-35 8E-40 313.5 21.6 276 555-853 1-282 (298)
268 cd08217 STKc_Nek2 Catalytic do 100.0 6.2E-35 1.4E-39 306.2 23.0 254 555-852 1-261 (265)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4E-35 8.6E-40 311.2 21.7 255 554-853 1-262 (286)
270 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.8E-35 1.5E-39 309.3 23.4 264 554-852 1-265 (287)
271 cd05083 PTKc_Chk Catalytic dom 100.0 3.8E-35 8.3E-40 305.5 20.9 247 554-856 6-253 (254)
272 cd06630 STKc_MEKK1 Catalytic d 100.0 6.9E-35 1.5E-39 306.3 23.0 256 555-852 1-263 (268)
273 cd06647 STKc_PAK_I Catalytic d 100.0 3.3E-35 7.1E-40 312.3 20.8 252 553-853 18-269 (293)
274 cd05034 PTKc_Src_like Catalyti 100.0 3.2E-35 6.9E-40 307.5 20.3 255 553-856 5-260 (261)
275 cd08220 STKc_Nek8 Catalytic do 100.0 7.5E-35 1.6E-39 303.8 22.7 249 555-852 1-252 (256)
276 KOG1035 eIF-2alpha kinase GCN2 100.0 4.9E-36 1.1E-40 337.2 14.5 267 551-852 476-870 (1351)
277 cd06605 PKc_MAPKK Catalytic do 100.0 2.7E-35 5.8E-40 308.9 19.3 255 554-853 1-257 (265)
278 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.3E-35 2E-39 306.2 23.3 265 556-857 1-272 (273)
279 cd05041 PTKc_Fes_like Catalyti 100.0 8.7E-35 1.9E-39 302.3 22.6 248 560-855 1-250 (251)
280 cd05046 PTK_CCK4 Pseudokinase 100.0 2.9E-35 6.3E-40 310.4 19.2 260 554-855 5-274 (275)
281 cd05112 PTKc_Itk Catalytic dom 100.0 6.7E-35 1.5E-39 304.1 21.7 251 554-854 4-255 (256)
282 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.3E-35 9.4E-40 311.7 20.6 279 552-852 3-287 (291)
283 cd05073 PTKc_Hck Catalytic dom 100.0 1E-34 2.2E-39 303.3 23.1 254 553-856 5-259 (260)
284 cd05044 PTKc_c-ros Catalytic d 100.0 5.1E-35 1.1E-39 307.5 20.9 254 560-855 1-268 (269)
285 cd06659 STKc_PAK6 Catalytic do 100.0 3.1E-35 6.6E-40 313.0 19.4 249 556-853 23-271 (297)
286 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-34 2.7E-39 302.5 23.4 248 555-852 1-254 (258)
287 cd07867 STKc_CDC2L6 Catalytic 100.0 9.8E-35 2.1E-39 313.2 23.2 204 559-776 6-219 (317)
288 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-34 2.5E-39 303.9 23.1 253 554-853 1-256 (264)
289 cd07860 STKc_CDK2_3 Catalytic 100.0 3.6E-35 7.9E-40 311.2 19.4 274 555-852 1-280 (284)
290 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.3E-35 2.9E-40 315.0 16.0 276 554-852 1-282 (286)
291 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-35 5.5E-40 319.7 18.3 287 553-858 4-298 (337)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 5.7E-35 1.2E-39 310.9 20.4 276 554-852 5-287 (291)
293 cd06617 PKc_MKK3_6 Catalytic d 100.0 1E-34 2.2E-39 307.7 22.1 254 554-852 1-260 (283)
294 cd05042 PTKc_Aatyk Catalytic d 100.0 7.9E-35 1.7E-39 305.9 20.8 257 560-855 1-268 (269)
295 cd05574 STKc_phototropin_like 100.0 6.8E-35 1.5E-39 314.1 20.6 260 554-852 1-288 (316)
296 cd06626 STKc_MEKK4 Catalytic d 100.0 1.9E-34 4.2E-39 302.2 23.5 255 555-852 1-260 (264)
297 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.1E-34 2.3E-39 305.6 21.4 255 555-852 2-268 (272)
298 KOG4250 TANK binding protein k 100.0 1.9E-35 4E-40 316.6 15.6 288 556-860 15-313 (732)
299 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-34 3.8E-39 305.5 22.9 249 555-852 20-268 (285)
300 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.3E-34 5E-39 302.2 23.3 261 554-852 1-263 (267)
301 cd07832 STKc_CCRK Catalytic do 100.0 1.9E-34 4E-39 306.2 22.7 274 555-853 1-282 (286)
302 cd06641 STKc_MST3 Catalytic do 100.0 2.3E-34 5E-39 303.6 23.2 248 555-853 5-253 (277)
303 cd05609 STKc_MAST Catalytic do 100.0 2.3E-34 5E-39 307.9 23.4 263 554-856 1-273 (305)
304 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-36 2.7E-41 343.5 6.1 257 551-852 1232-1493(1509)
305 smart00219 TyrKc Tyrosine kina 100.0 2.4E-34 5.1E-39 300.5 22.9 252 556-854 1-258 (258)
306 cd05086 PTKc_Aatyk2 Catalytic 100.0 4E-34 8.7E-39 300.1 24.2 256 560-855 1-267 (268)
307 cd07835 STKc_CDK1_like Catalyt 100.0 9.1E-35 2E-39 308.0 19.3 272 556-852 1-279 (283)
308 cd07850 STKc_JNK Catalytic dom 100.0 1.5E-34 3.2E-39 315.9 21.2 280 552-853 14-311 (353)
309 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-34 3.2E-39 302.1 20.4 238 560-854 1-258 (259)
310 cd06917 STKc_NAK1_like Catalyt 100.0 1.5E-34 3.2E-39 305.3 20.5 249 555-853 2-255 (277)
311 cd07855 STKc_ERK5 Catalytic do 100.0 9.5E-35 2.1E-39 315.0 19.4 284 553-853 4-294 (334)
312 cd07837 STKc_CdkB_plant Cataly 100.0 2.2E-34 4.7E-39 307.1 21.6 282 554-852 1-290 (295)
313 cd06607 STKc_TAO Catalytic dom 100.0 3E-34 6.5E-39 307.4 22.7 247 554-853 15-267 (307)
314 KOG0199 ACK and related non-re 100.0 2E-35 4.4E-40 312.5 13.3 255 556-856 112-371 (1039)
315 PHA02882 putative serine/threo 100.0 1.9E-34 4.2E-39 306.3 21.0 269 553-854 11-293 (294)
316 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-34 3.6E-39 306.8 20.1 245 554-852 1-253 (290)
317 KOG0607 MAP kinase-interacting 100.0 4.6E-35 1E-39 283.0 14.2 268 546-852 75-360 (463)
318 cd06614 STKc_PAK Catalytic dom 100.0 3E-34 6.5E-39 304.4 21.7 254 552-853 17-270 (286)
319 PHA03390 pk1 serine/threonine- 100.0 5.5E-34 1.2E-38 298.4 23.2 251 546-852 6-261 (267)
320 cd07833 STKc_CDKL Catalytic do 100.0 9.7E-35 2.1E-39 308.7 17.5 277 554-852 1-284 (288)
321 cd08226 PK_STRAD_beta Pseudoki 100.0 4.5E-34 9.9E-39 308.8 22.9 280 560-852 4-307 (328)
322 cd08225 STKc_Nek5 Catalytic do 100.0 2.2E-34 4.8E-39 300.5 19.6 251 555-853 1-254 (257)
323 cd08528 STKc_Nek10 Catalytic d 100.0 5.1E-34 1.1E-38 299.8 22.4 255 555-855 1-268 (269)
324 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-34 3E-39 302.0 17.9 248 555-851 1-253 (258)
325 KOG0586 Serine/threonine prote 100.0 1.1E-34 2.4E-39 306.7 17.1 251 552-854 54-307 (596)
326 KOG0983 Mitogen-activated prot 100.0 4.9E-35 1.1E-39 277.1 12.7 252 554-852 92-348 (391)
327 cd07845 STKc_CDK10 Catalytic d 100.0 3.9E-34 8.4E-39 307.0 21.4 279 553-853 6-290 (309)
328 KOG0666 Cyclin C-dependent kin 100.0 2.2E-35 4.8E-40 284.4 10.3 210 553-776 23-243 (438)
329 cd07836 STKc_Pho85 Catalytic d 100.0 3.1E-34 6.7E-39 304.1 20.2 274 555-852 1-280 (284)
330 cd05633 STKc_GRK3 Catalytic do 100.0 6E-34 1.3E-38 300.2 22.0 243 561-853 1-255 (279)
331 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-33 2.4E-38 300.5 24.1 277 556-852 1-283 (287)
332 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.7E-34 1.5E-38 297.9 22.0 254 554-852 2-260 (264)
333 cd07865 STKc_CDK9 Catalytic do 100.0 7.7E-34 1.7E-38 305.3 23.1 286 552-852 10-306 (310)
334 cd07843 STKc_CDC2L1 Catalytic 100.0 2.5E-34 5.5E-39 306.1 19.0 275 554-852 5-289 (293)
335 cd05122 PKc_STE Catalytic doma 100.0 5.8E-34 1.3E-38 296.4 21.4 250 555-852 1-250 (253)
336 cd06657 STKc_PAK4 Catalytic do 100.0 4.4E-34 9.5E-39 303.1 20.6 245 559-852 25-269 (292)
337 cd07834 STKc_MAPK Catalytic do 100.0 3.2E-34 7E-39 310.8 19.4 288 555-858 1-296 (330)
338 PLN00009 cyclin-dependent kina 100.0 5.4E-34 1.2E-38 303.7 20.6 274 554-852 2-283 (294)
339 cd07854 STKc_MAPK4_6 Catalytic 100.0 2E-34 4.4E-39 313.1 17.6 282 553-852 4-299 (342)
340 KOG0669 Cyclin T-dependent kin 100.0 4.1E-36 8.9E-41 280.9 3.4 285 554-853 17-315 (376)
341 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-33 2.5E-38 304.0 22.4 247 556-855 27-279 (317)
342 cd07842 STKc_CDK8_like Catalyt 100.0 1.3E-33 2.9E-38 304.3 22.7 210 555-777 1-220 (316)
343 cd06616 PKc_MKK4 Catalytic dom 100.0 3.7E-34 8E-39 304.1 17.9 258 555-853 5-267 (288)
344 cd07864 STKc_CDK12 Catalytic d 100.0 8.4E-34 1.8E-38 303.7 20.7 284 551-852 4-298 (302)
345 cd07831 STKc_MOK Catalytic dom 100.0 8.4E-34 1.8E-38 300.5 20.3 272 556-852 1-278 (282)
346 cd08215 STKc_Nek Catalytic dom 100.0 1.7E-33 3.7E-38 294.0 22.4 252 555-852 1-254 (258)
347 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-33 3.1E-38 303.5 22.4 270 566-853 12-295 (314)
348 cd07852 STKc_MAPK15 Catalytic 100.0 5.1E-34 1.1E-38 309.9 18.8 284 552-853 5-295 (337)
349 cd07840 STKc_CDK9_like Catalyt 100.0 7.4E-34 1.6E-38 301.8 19.7 276 556-852 1-283 (287)
350 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.6E-34 9.9E-39 308.0 18.1 277 550-853 6-288 (328)
351 cd05577 STKc_GRK Catalytic dom 100.0 1.4E-33 3.1E-38 297.6 21.2 245 562-852 1-253 (277)
352 cd06627 STKc_Cdc7_like Catalyt 100.0 1.3E-33 2.9E-38 294.0 20.5 248 555-852 1-250 (254)
353 KOG0618 Serine/threonine phosp 100.0 1.9E-36 4.1E-41 331.5 -1.0 441 2-474 3-464 (1081)
354 cd06606 STKc_MAPKKK Catalytic 100.0 3.7E-33 8E-38 291.7 23.5 254 555-852 1-256 (260)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 1.2E-33 2.6E-38 307.0 19.8 282 554-859 15-305 (342)
356 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-33 2.3E-38 304.4 19.2 290 553-852 7-307 (311)
357 cd08530 STKc_CNK2-like Catalyt 100.0 1.7E-33 3.7E-38 293.6 20.2 250 555-852 1-252 (256)
358 cd05118 STKc_CMGC Catalytic do 100.0 1.9E-33 4.2E-38 298.0 20.7 273 556-852 1-279 (283)
359 cd05572 STKc_cGK_PKG Catalytic 100.0 3.4E-33 7.4E-38 292.3 22.2 243 562-852 1-251 (262)
360 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.7E-33 3.6E-38 306.2 20.5 284 547-853 10-300 (345)
361 PTZ00024 cyclin-dependent prot 100.0 2.1E-33 4.5E-38 304.9 20.5 281 553-852 7-312 (335)
362 cd05606 STKc_beta_ARK Catalyti 100.0 6.8E-33 1.5E-37 292.2 23.7 242 561-852 1-254 (278)
363 cd07857 STKc_MPK1 Catalytic do 100.0 1.9E-33 4.1E-38 304.5 20.0 282 555-852 1-291 (332)
364 KOG0986 G protein-coupled rece 100.0 1.6E-34 3.5E-39 292.2 10.6 248 553-846 184-434 (591)
365 KOG1151 Tousled-like protein k 100.0 1E-34 2.2E-39 291.6 9.2 265 553-852 462-740 (775)
366 cd05611 STKc_Rim15_like Cataly 100.0 2.1E-33 4.6E-38 293.5 19.5 244 560-854 2-249 (260)
367 KOG0662 Cyclin-dependent kinas 100.0 7.5E-34 1.6E-38 252.1 13.5 270 555-852 3-282 (292)
368 cd06634 STKc_TAO2 Catalytic do 100.0 3E-33 6.5E-38 299.5 21.0 249 554-855 15-269 (308)
369 PHA03210 serine/threonine kina 100.0 2E-33 4.3E-38 318.5 20.5 284 552-853 146-454 (501)
370 cd07880 STKc_p38gamma_MAPK12 C 100.0 2E-33 4.4E-38 305.2 19.7 278 552-852 13-297 (343)
371 cd05579 STKc_MAST_like Catalyt 100.0 2.3E-33 5E-38 294.2 18.5 253 562-855 1-256 (265)
372 cd06618 PKc_MKK7 Catalytic dom 100.0 4.4E-33 9.5E-38 296.8 20.9 255 553-854 14-274 (296)
373 cd06633 STKc_TAO3 Catalytic do 100.0 1.1E-32 2.4E-37 295.7 23.9 245 556-853 23-273 (313)
374 KOG0690 Serine/threonine prote 100.0 3E-34 6.4E-39 277.8 8.7 201 553-775 167-370 (516)
375 cd07829 STKc_CDK_like Catalyti 100.0 5E-33 1.1E-37 294.6 18.7 271 556-852 1-278 (282)
376 KOG0671 LAMMER dual specificit 100.0 1E-33 2.3E-38 281.8 12.4 273 553-852 88-405 (415)
377 cd05581 STKc_PDK1 Catalytic do 100.0 3.1E-33 6.6E-38 295.9 16.8 256 554-852 1-276 (280)
378 cd07830 STKc_MAK_like Catalyti 100.0 6.8E-33 1.5E-37 293.7 19.1 271 556-852 1-279 (283)
379 cd05613 STKc_MSK1_N N-terminal 100.0 1.6E-32 3.4E-37 291.8 21.7 252 555-852 1-267 (290)
380 cd07851 STKc_p38 Catalytic dom 100.0 2.9E-33 6.3E-38 304.2 16.3 278 552-852 13-297 (343)
381 cd05583 STKc_MSK_N N-terminal 100.0 8.1E-33 1.8E-37 293.7 19.3 257 555-857 1-267 (288)
382 cd08222 STKc_Nek11 Catalytic d 100.0 8.2E-33 1.8E-37 289.1 18.7 251 555-852 1-256 (260)
383 KOG0612 Rho-associated, coiled 100.0 7.1E-34 1.5E-38 317.3 10.5 209 546-775 67-283 (1317)
384 KOG0603 Ribosomal protein S6 k 100.0 4.2E-33 9.1E-38 296.5 14.6 242 552-853 320-563 (612)
385 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-32 4.1E-37 320.0 21.1 147 554-714 4-153 (669)
386 KOG4236 Serine/threonine prote 100.0 1.3E-33 2.8E-38 289.5 9.5 245 559-852 569-818 (888)
387 KOG0200 Fibroblast/platelet-de 100.0 2E-32 4.2E-37 314.5 19.4 267 551-859 293-581 (609)
388 KOG0587 Traf2- and Nck-interac 100.0 2.5E-32 5.5E-37 298.1 18.1 266 545-852 10-281 (953)
389 cd05123 STKc_AGC Catalytic dom 100.0 8.9E-32 1.9E-36 279.5 20.3 237 562-849 1-240 (250)
390 KOG1006 Mitogen-activated prot 100.0 4.9E-34 1.1E-38 269.4 2.4 254 559-852 69-326 (361)
391 cd05576 STKc_RPK118_like Catal 100.0 5.5E-32 1.2E-36 278.0 16.6 222 565-849 4-225 (237)
392 KOG1290 Serine/threonine prote 100.0 7.3E-32 1.6E-36 275.7 16.3 137 553-698 77-221 (590)
393 PLN03225 Serine/threonine-prot 100.0 2.6E-31 5.7E-36 302.1 19.0 274 552-853 130-450 (566)
394 KOG1027 Serine/threonine prote 100.0 2.8E-32 6.1E-37 296.3 10.3 248 556-852 511-766 (903)
395 KOG0696 Serine/threonine prote 100.0 2.4E-32 5.1E-37 272.5 8.5 205 552-778 347-555 (683)
396 KOG0984 Mitogen-activated prot 100.0 6.1E-32 1.3E-36 246.0 10.1 209 551-778 43-257 (282)
397 KOG0668 Casein kinase II, alph 100.0 3.7E-32 8E-37 251.0 7.2 281 553-861 37-332 (338)
398 KOG1024 Receptor-like protein 100.0 5.9E-31 1.3E-35 261.3 14.7 274 546-860 276-558 (563)
399 smart00220 S_TKc Serine/Threon 100.0 6.6E-30 1.4E-34 264.2 20.3 239 566-852 1-240 (244)
400 PLN03224 probable serine/threo 100.0 7.3E-30 1.6E-34 282.0 20.7 268 552-852 143-499 (507)
401 KOG0695 Serine/threonine prote 100.0 9.4E-31 2E-35 254.4 11.9 204 551-776 247-454 (593)
402 KOG0664 Nemo-like MAPK-related 100.0 3.7E-32 8E-37 257.2 1.7 204 555-775 54-260 (449)
403 KOG0614 cGMP-dependent protein 100.0 1.4E-31 3.1E-36 273.9 4.5 243 554-846 420-665 (732)
404 KOG4237 Extracellular matrix p 100.0 4.6E-32 1E-36 270.1 -2.2 305 2-330 51-358 (498)
405 KOG1152 Signal transduction se 100.0 2.6E-30 5.5E-35 269.0 8.6 206 545-774 552-770 (772)
406 KOG0608 Warts/lats-like serine 100.0 1.9E-29 4.2E-34 264.3 14.8 212 554-779 629-877 (1034)
407 KOG0670 U4/U6-associated splic 100.0 5E-30 1.1E-34 263.3 8.5 205 551-778 429-640 (752)
408 KOG0665 Jun-N-terminal kinase 100.0 3.2E-29 6.8E-34 244.0 9.9 271 553-852 16-309 (369)
409 KOG1345 Serine/threonine kinas 100.0 6.9E-29 1.5E-33 235.3 11.5 255 553-854 23-285 (378)
410 KOG0576 Mitogen-activated prot 100.0 8E-30 1.7E-34 269.9 4.5 254 553-852 14-270 (829)
411 KOG4237 Extracellular matrix p 100.0 6.8E-31 1.5E-35 261.8 -3.4 398 2-425 72-498 (498)
412 KOG1167 Serine/threonine prote 100.0 3.8E-28 8.3E-33 246.0 13.6 283 551-852 33-380 (418)
413 cd00180 PKc Catalytic domain o 99.9 7.8E-27 1.7E-31 235.5 20.9 211 562-853 1-214 (215)
414 smart00221 STYKc Protein kinas 99.9 4.9E-26 1.1E-30 232.2 19.0 200 556-775 1-202 (225)
415 smart00750 KIND kinase non-cat 99.9 6.4E-25 1.4E-29 214.3 15.1 170 641-860 1-172 (176)
416 PLN03210 Resistant to P. syrin 99.9 2.5E-24 5.5E-29 266.1 23.7 337 39-425 551-903 (1153)
417 PLN03210 Resistant to P. syrin 99.9 3.3E-24 7.1E-29 265.1 22.4 340 61-450 549-904 (1153)
418 PLN00181 protein SPA1-RELATED; 99.9 5.1E-25 1.1E-29 264.7 10.9 207 607-852 28-264 (793)
419 PRK15387 E3 ubiquitin-protein 99.9 1.3E-24 2.9E-29 248.0 13.0 265 22-338 201-465 (788)
420 PRK09188 serine/threonine prot 99.9 4.9E-24 1.1E-28 225.7 15.2 175 550-748 14-195 (365)
421 KOG1165 Casein kinase (serine/ 99.9 5.2E-23 1.1E-27 201.2 18.2 276 554-867 28-309 (449)
422 PRK15387 E3 ubiquitin-protein 99.9 1.4E-23 3.1E-28 239.6 16.6 265 46-363 201-465 (788)
423 KOG1164 Casein kinase (serine/ 99.9 4.3E-22 9.4E-27 213.0 22.1 271 555-861 19-301 (322)
424 KOG1163 Casein kinase (serine/ 99.9 7.5E-23 1.6E-27 191.2 13.3 209 552-777 13-225 (341)
425 KOG0195 Integrin-linked kinase 99.9 5.6E-24 1.2E-28 201.8 4.3 248 557-858 193-447 (448)
426 PRK15370 E3 ubiquitin-protein 99.9 1.1E-22 2.3E-27 234.4 9.5 246 23-307 179-428 (754)
427 KOG0590 Checkpoint kinase and 99.9 1.2E-22 2.7E-27 229.8 8.5 258 557-853 321-585 (601)
428 PRK15370 E3 ubiquitin-protein 99.9 2.2E-21 4.8E-26 223.6 12.9 224 46-331 178-401 (754)
429 KOG4158 BRPK/PTEN-induced prot 99.8 3.4E-21 7.4E-26 192.8 10.7 206 609-854 274-511 (598)
430 PRK10359 lipopolysaccharide co 99.8 4.4E-21 9.6E-26 188.1 9.6 175 553-767 30-216 (232)
431 COG0515 SPS1 Serine/threonine 99.8 1.3E-19 2.9E-24 197.8 22.0 264 556-853 2-275 (384)
432 PF14531 Kinase-like: Kinase-l 99.8 6E-21 1.3E-25 192.9 8.9 239 556-844 14-288 (288)
433 cd05147 RIO1_euk RIO kinase fa 99.8 1.6E-20 3.5E-25 183.2 11.4 139 559-715 2-167 (190)
434 KOG1240 Protein kinase contain 99.8 1.7E-21 3.6E-26 218.1 2.7 254 555-857 24-295 (1431)
435 cd05145 RIO1_like RIO kinase f 99.8 1.9E-19 4E-24 176.9 14.5 140 559-717 2-169 (190)
436 PRK12274 serine/threonine prot 99.8 1.2E-19 2.5E-24 173.6 11.3 192 557-776 5-210 (218)
437 KOG0617 Ras suppressor protein 99.8 1.2E-21 2.6E-26 173.5 -4.0 166 241-436 28-193 (264)
438 KOG0617 Ras suppressor protein 99.8 3.9E-21 8.5E-26 170.3 -1.8 181 266-476 29-213 (264)
439 KOG1023 Natriuretic peptide re 99.8 5E-19 1.1E-23 190.4 12.6 219 605-860 1-227 (484)
440 PRK10345 hypothetical protein; 99.8 2.1E-18 4.6E-23 169.4 14.9 140 556-712 4-156 (210)
441 cd00116 LRR_RI Leucine-rich re 99.8 1.5E-20 3.3E-25 202.7 -0.4 207 2-211 3-235 (319)
442 KOG1033 eIF-2alpha kinase PEK/ 99.8 6.8E-20 1.5E-24 192.4 2.9 253 556-851 246-510 (516)
443 smart00090 RIO RIO-like kinase 99.8 5.8E-18 1.3E-22 171.0 12.7 144 553-715 27-198 (237)
444 cd00116 LRR_RI Leucine-rich re 99.7 5E-20 1.1E-24 198.7 -3.2 277 26-330 2-319 (319)
445 KOG1166 Mitotic checkpoint ser 99.7 5.3E-18 1.1E-22 195.1 13.1 201 548-772 692-902 (974)
446 KOG0603 Ribosomal protein S6 k 99.7 1.4E-18 3.1E-23 186.1 2.1 226 561-847 1-232 (612)
447 cd05144 RIO2_C RIO kinase fami 99.7 2.7E-16 5.8E-21 156.0 13.2 144 548-716 9-176 (198)
448 PRK09605 bifunctional UGMP fam 99.7 2.8E-16 6.1E-21 179.9 15.0 144 546-714 325-476 (535)
449 PRK14879 serine/threonine prot 99.7 5.1E-16 1.1E-20 156.2 13.6 133 560-713 2-142 (211)
450 KOG0606 Microtubule-associated 99.7 3.6E-17 7.9E-22 183.8 5.0 216 553-845 82-304 (1205)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 1.2E-15 2.7E-20 151.8 12.2 130 561-714 1-138 (199)
452 cd05119 RIO RIO kinase family, 99.6 7.5E-15 1.6E-19 144.6 11.8 136 559-716 2-165 (187)
453 PRK01723 3-deoxy-D-manno-octul 99.6 2.3E-14 5E-19 145.2 14.7 139 559-714 36-191 (239)
454 KOG0590 Checkpoint kinase and 99.6 4.8E-16 1E-20 176.4 0.6 258 553-852 19-285 (601)
455 cd05120 APH_ChoK_like Aminogly 99.5 4.8E-14 1E-18 133.9 12.5 135 558-714 2-138 (155)
456 PLN03150 hypothetical protein; 99.5 2.4E-14 5.2E-19 165.4 9.0 119 368-489 419-539 (623)
457 KOG0532 Leucine-rich repeat (L 99.5 7.2E-16 1.6E-20 162.0 -3.4 189 251-450 80-271 (722)
458 KOG0532 Leucine-rich repeat (L 99.5 1.2E-15 2.6E-20 160.3 -4.0 178 268-455 73-250 (722)
459 KOG1266 Protein kinase [Signal 99.5 1.3E-14 2.9E-19 142.7 3.1 161 605-772 121-281 (458)
460 COG4886 Leucine-rich repeat (L 99.4 1.5E-13 3.3E-18 152.4 9.1 175 21-210 115-290 (394)
461 TIGR01982 UbiB 2-polyprenylphe 99.4 1.1E-12 2.3E-17 144.9 13.6 162 539-717 91-309 (437)
462 KOG0601 Cyclin-dependent kinas 99.4 3.3E-13 7.1E-18 145.6 7.6 253 554-852 114-378 (524)
463 COG4886 Leucine-rich repeat (L 99.4 3.9E-13 8.3E-18 149.2 5.8 178 246-432 116-294 (394)
464 PF14580 LRR_9: Leucine-rich r 99.3 4E-13 8.8E-18 126.5 3.4 142 1-174 1-147 (175)
465 cd05146 RIO3_euk RIO kinase fa 99.3 1.9E-11 4E-16 117.8 14.3 138 559-716 2-175 (197)
466 PRK04750 ubiB putative ubiquin 99.3 4.9E-12 1.1E-16 140.7 11.4 150 554-718 120-317 (537)
467 KOG1909 Ran GTPase-activating 99.3 3.2E-14 6.9E-19 141.7 -6.8 141 291-452 154-311 (382)
468 KOG1909 Ran GTPase-activating 99.3 4.3E-13 9.3E-18 133.8 -0.2 256 20-330 28-310 (382)
469 KOG1243 Protein kinase [Genera 99.3 3.2E-11 7E-16 131.2 13.4 170 572-769 30-199 (690)
470 KOG3207 Beta-tubulin folding c 99.3 4E-13 8.7E-18 137.5 -1.2 162 43-210 118-284 (505)
471 KOG3207 Beta-tubulin folding c 99.3 1.3E-12 2.8E-17 133.9 1.7 191 19-210 118-314 (505)
472 KOG0531 Protein phosphatase 1, 99.2 8.1E-13 1.7E-17 146.5 -1.2 246 43-334 69-321 (414)
473 cd05151 ChoK Choline Kinase (C 99.2 2.1E-11 4.6E-16 117.9 8.9 130 559-713 3-135 (170)
474 PF14580 LRR_9: Leucine-rich r 99.2 3.7E-12 8.1E-17 120.0 2.9 132 42-206 15-149 (175)
475 KOG0531 Protein phosphatase 1, 99.2 1.1E-12 2.4E-17 145.4 -0.9 218 20-259 70-290 (414)
476 COG4248 Uncharacterized protei 99.2 7.5E-10 1.6E-14 113.5 18.9 276 557-863 14-306 (637)
477 KOG1259 Nischarin, modulator o 99.2 3.2E-12 7E-17 124.2 1.7 134 316-456 282-416 (490)
478 PLN03150 hypothetical protein; 99.2 2.6E-11 5.6E-16 140.4 6.6 113 345-457 420-533 (623)
479 KOG0601 Cyclin-dependent kinas 99.2 3.2E-11 6.9E-16 130.4 6.0 250 551-857 262-518 (524)
480 KOG1259 Nischarin, modulator o 99.1 1.1E-11 2.3E-16 120.7 1.2 125 344-474 285-411 (490)
481 KOG4658 Apoptotic ATPase [Sign 99.1 3E-11 6.6E-16 142.4 1.7 271 22-307 523-807 (889)
482 COG3642 Mn2+-dependent serine/ 99.0 2.2E-09 4.8E-14 99.0 12.1 129 560-714 2-140 (204)
483 KOG0606 Microtubule-associated 99.0 6.8E-11 1.5E-15 134.2 2.5 215 551-779 801-1041(1205)
484 KOG3087 Serine/threonine prote 99.0 2.7E-09 5.9E-14 97.6 11.7 142 558-713 11-164 (229)
485 KOG3741 Poly(A) ribonuclease s 99.0 7.1E-09 1.5E-13 109.4 16.3 178 566-772 288-475 (655)
486 cd05154 ACAD10_11_like Acyl-Co 99.0 2E-09 4.4E-14 109.2 12.0 144 560-713 4-205 (223)
487 PF01163 RIO1: RIO1 family; I 99.0 2.6E-09 5.6E-14 102.7 11.8 126 569-716 1-157 (188)
488 KOG4658 Apoptotic ATPase [Sign 99.0 4.4E-10 9.5E-15 132.7 6.4 132 43-178 520-653 (889)
489 PF13855 LRR_8: Leucine rich r 99.0 4.3E-10 9.4E-15 87.1 3.4 59 23-81 2-60 (61)
490 COG0478 RIO-like serine/threon 98.9 4.6E-09 9.9E-14 102.9 10.8 137 555-715 92-252 (304)
491 PF13855 LRR_8: Leucine rich r 98.9 5E-10 1.1E-14 86.7 3.3 61 46-106 1-61 (61)
492 PRK15123 lipopolysaccharide co 98.9 3.8E-08 8.3E-13 100.8 16.3 145 560-713 28-193 (268)
493 PRK09902 hypothetical protein; 98.7 2.6E-07 5.7E-12 89.1 13.9 143 562-714 26-179 (216)
494 KOG2137 Protein kinase [Signal 98.7 1.2E-08 2.7E-13 112.0 4.2 158 668-852 105-264 (700)
495 COG1718 RIO1 Serine/threonine 98.6 2.9E-07 6.4E-12 89.6 12.3 155 542-716 33-217 (268)
496 KOG1859 Leucine-rich repeat pr 98.6 1.2E-09 2.6E-14 118.8 -5.1 198 270-477 84-294 (1096)
497 KOG2982 Uncharacterized conser 98.6 6.7E-09 1.4E-13 101.6 -0.0 109 23-131 46-158 (418)
498 KOG2982 Uncharacterized conser 98.6 2.6E-09 5.6E-14 104.4 -2.9 216 42-284 41-263 (418)
499 PF06293 Kdo: Lipopolysacchari 98.6 4.7E-07 1E-11 89.9 13.0 110 595-714 55-170 (206)
500 KOG1859 Leucine-rich repeat pr 98.6 8.1E-10 1.8E-14 120.1 -7.4 175 21-211 83-268 (1096)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.7e-100 Score=938.15 Aligned_cols=810 Identities=31% Similarity=0.508 Sum_probs=558.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
|||++|.+++.+|..+. .+++|++|+|++|.+++.+|.+|+++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 145 L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 223 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNN 223 (968)
T ss_pred EECcCCcccccCChHHh-cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCc
Confidence 34444444444444443 44555555555555544445555555555555555555544445555555555555555555
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
+.+.+|..|.++++|++|+|++|.+.+.+| ..+.++++|+.|++++|.+++..|..+.++++|++|+|++|.+.+..|.
T Consensus 224 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~ 302 (968)
T PLN00113 224 LSGEIPYEIGGLTSLNHLDLVYNNLTGPIP-SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPE 302 (968)
T ss_pred cCCcCChhHhcCCCCCEEECcCceeccccC-hhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCCh
Confidence 554455555555555555555555544444 2344555555555555555544555555555555555555555555555
Q ss_pred CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCcc
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPG 241 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 241 (869)
.|..+++|+.|++++|.+....+ ..+..+++|+.|++++|.+.+.+|..+..+.+ |+.|++++|.+++.+|..
T Consensus 303 ~~~~l~~L~~L~l~~n~~~~~~~------~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~-L~~L~Ls~n~l~~~~p~~ 375 (968)
T PLN00113 303 LVIQLQNLEILHLFSNNFTGKIP------VALTSLPRLQVLQLWSNKFSGEIPKNLGKHNN-LTVLDLSTNNLTGEIPEG 375 (968)
T ss_pred hHcCCCCCcEEECCCCccCCcCC------hhHhcCCCCCEEECcCCCCcCcCChHHhCCCC-CcEEECCCCeeEeeCChh
Confidence 55555555555555555543221 24555666666666666666666666666554 666666666666666666
Q ss_pred ccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccc
Q 002897 242 LGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLI 321 (869)
Q Consensus 242 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 321 (869)
+..+++|+.|++++|++.+..|..++.+++|+.|++++|++++..|..|.++++|+.|++++|++++.++..+..+++|+
T Consensus 376 ~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 455 (968)
T PLN00113 376 LCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ 455 (968)
T ss_pred HhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCc
Confidence 66666666666666666666677777777777777777777777777777777777888888877777777777788888
Q ss_pred eeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCc
Q 002897 322 MLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDN 401 (869)
Q Consensus 322 ~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 401 (869)
.|++++|++.+.+|..+. ...++.|++++|++++..|..+.++++|+.|+|++|.+++.+|..+.++++|++|++++|
T Consensus 456 ~L~L~~n~~~~~~p~~~~--~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 533 (968)
T PLN00113 456 MLSLARNKFFGGLPDSFG--SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHN 533 (968)
T ss_pred EEECcCceeeeecCcccc--cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCC
Confidence 888888888776666442 256788999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCCCCCC
Q 002897 402 SFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCGGLDE 481 (869)
Q Consensus 402 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~ 481 (869)
++++.+|..|..+++|+.|+|++|++++.+|..+..+++|+.+++++|+++|.+|..+.+..+....+.||+.+|+....
T Consensus 534 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 613 (968)
T PLN00113 534 QLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTT 613 (968)
T ss_pred cccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999888888888899999999997655
Q ss_pred CCCCCCCCCCcchhhhhhhhhhHHHHHHHHHHHHHHhheeeecccCC--Ccccch-hhhccCC---CcccHHHHHHHhcC
Q 002897 482 FHLPSCPSKRSRKLIATILKVVIPTIVSCLILSACFIVIYGRRRSTD--RSFERT-TMVEQQF---PMISYAKLSKATSE 555 (869)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~r~~~--~~~~~~-~~~~~~~---~~~~~~~~~~~~~~ 555 (869)
...+.|...+....+ +..+++.+++.+++++++++++++++|+.. ++.+.. ...+... ..............
T Consensus 614 ~~~~~c~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (968)
T PLN00113 614 SGLPPCKRVRKTPSW--WFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSS 691 (968)
T ss_pred cCCCCCcccccccee--eeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhh
Confidence 555677543222111 111111111111111122222222222211 111110 0000000 00001122333456
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
|...++||+|+||.||+|++..+|..||||+++.... ....|++++++++|||||+++++|.+. ...++||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~~lv~ 762 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGAYLIH 762 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCCEEEE
Confidence 8888999999999999999988999999999864332 223568899999999999999998654 5689999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.++++. ++|.++.+++.|+|+|++|||..+.++|+|||+||+||+++.++.+++. ||.+...
T Consensus 763 Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 763 EYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL 832 (968)
T ss_pred eCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence 99999999999953 7899999999999999999996666699999999999999999888875 6554322
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc-c
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE-K 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-~ 794 (869)
.. .....|+..|+|||++.+..++.++|||||||++|||+||+.||+..........+|.+..... .
T Consensus 833 ~~------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 900 (968)
T PLN00113 833 CT------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCH 900 (968)
T ss_pred cc------------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccc
Confidence 11 1123578999999999999999999999999999999999999976555445555555543322 2
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcccCC
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQDG 867 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 867 (869)
.....|+.+... .....+...++.+++.+||+.||++||||+||++.|+++.+.......+
T Consensus 901 ~~~~~~~~~~~~------------~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~~~~ 961 (968)
T PLN00113 901 LDMWIDPSIRGD------------VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSCVTG 961 (968)
T ss_pred hhheeCccccCC------------CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccccccccC
Confidence 333444433211 1112345567889999999999999999999999999998766554443
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5e-56 Score=549.02 Aligned_cols=471 Identities=33% Similarity=0.535 Sum_probs=318.3
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+|||++|+++|.+|.+++..+++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..|+.+++|++|+|++|
T Consensus 97 ~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 174 (968)
T PLN00113 97 TINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGN 174 (968)
T ss_pred EEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccC
Confidence 3677888887778887776677777777777777655543 33555556666666555555555666666666666666
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
.+.+.+|..|.++++|++|+|++|.+.+.+| ..+.++++|+.|++++|++++.+|..++++++|++|++++|.+.+..|
T Consensus 175 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 253 (968)
T PLN00113 175 VLVGKIPNSLTNLTSLEFLTLASNQLVGQIP-RELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP 253 (968)
T ss_pred cccccCChhhhhCcCCCeeeccCCCCcCcCC-hHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccC
Confidence 6655556666666666666666666554444 335555555555555555555555555555555555555555555555
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCc------------------chhhhccCCCCCcEEEccCCCCCCCCChhhhhccc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDL------------------DFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSN 222 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~------------------~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 222 (869)
..|..+++|++|++++|.+....+..+ ..+..+.++++|++|++++|.+++..|..+..+++
T Consensus 254 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 333 (968)
T PLN00113 254 SSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPR 333 (968)
T ss_pred hhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCC
Confidence 555555555555555555543211100 01123445555555555555555555555555544
Q ss_pred cceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecc
Q 002897 223 TMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALE 302 (869)
Q Consensus 223 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 302 (869)
|+.|++++|.+.+.+|..++.+++|+.|++++|++.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|+++
T Consensus 334 -L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~ 412 (968)
T PLN00113 334 -LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQ 412 (968)
T ss_pred -CCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECc
Confidence 5555555555555555555555555555555555555555555555566666666666665666666666677777777
Q ss_pred cccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccccccccccccc
Q 002897 303 INNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGD 382 (869)
Q Consensus 303 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 382 (869)
+|++++..|..|..+++|+.|++++|++++.+|..+.. .+.++.|++++|++.+.+|..+ ..++|+.|++++|++++.
T Consensus 413 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~ 490 (968)
T PLN00113 413 DNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWD-MPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGA 490 (968)
T ss_pred CCEeeeECChhHhcCCCCCEEECcCCcccCccChhhcc-CCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCc
Confidence 77777666777777777777777777777665554443 3445678888888887777655 457889999999999999
Q ss_pred CCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCC-Ccc
Q 002897 383 IPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GVF 461 (869)
Q Consensus 383 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~ 461 (869)
+|..+.++++|+.|++++|++++.+|..++.+++|++|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.. ..+
T Consensus 491 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 570 (968)
T PLN00113 491 VPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNV 570 (968)
T ss_pred cChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988864 567
Q ss_pred CCCccccccCCcccCC
Q 002897 462 SNKTRFSLSGNGKLCG 477 (869)
Q Consensus 462 ~~~~~~~~~~n~~~c~ 477 (869)
..++.+.+++|+..+.
T Consensus 571 ~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 571 ESLVQVNISHNHLHGS 586 (968)
T ss_pred cccCEEeccCCcceee
Confidence 7889999999987653
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-48 Score=414.86 Aligned_cols=289 Identities=40% Similarity=0.673 Sum_probs=244.1
Q ss_pred CCCcccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEE
Q 002897 540 QFPMISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITI 619 (869)
Q Consensus 540 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 619 (869)
....+++.++..+|++|...++||+|+||.||+|... +|+.||||++........++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4567999999999999999999999999999999996 669999998865443314569999999999999999999999
Q ss_pred eeccccCCCc-eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 620 CSSIDFNGVD-FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 620 ~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
|.+. + ..++|||||++|+|.++++..... +++|..+++||.++|+||+|||+.+.|+||||||||+|||+
T Consensus 140 C~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 140 CLEG-----GEHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred EecC-----CceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence 9875 3 689999999999999999987642 58999999999999999999999998899999999999999
Q ss_pred cCCCcEEEccccccccCCC-CCCCCccccCCCCCCc-cCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 699 DHDMVAHVGDFGLAKFLPA-RPLDTVVETPSSSSGI-KGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
|+++++||+|||+|+..+. .. ..... .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+..
T Consensus 211 D~~~~aKlsDFGLa~~~~~~~~---------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 211 DEDFNAKLSDFGLAKLGPEGDT---------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred CCCCCEEccCccCcccCCcccc---------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 9999999999999965543 21 11111 6999999999999999999999999999999999999998764
Q ss_pred c-cCCchHHHhhhhhccc-ccccccCccchh-hhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 777 F-HEGLTLHEFSKMVLPE-KVMEIVDPSLLL-EVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 777 ~-~~~~~~~~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. .....+..|....... .+.+++|+.+.. .. ...+....+..++.+|++.+|++||+|.||+++
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~-------------~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEY-------------PDEKEVKKLAELALRCLRPDPKERPTMSQVVKE 348 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccCCCC-------------ChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence 3 3344467776555444 688999988752 21 111566779999999999999999999999999
Q ss_pred HHHHHHh
Q 002897 854 LCAAREA 860 (869)
Q Consensus 854 L~~~~~~ 860 (869)
|+.+...
T Consensus 349 L~~~~~~ 355 (361)
T KOG1187|consen 349 LEGILSL 355 (361)
T ss_pred HHhhccc
Confidence 9666543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-47 Score=380.09 Aligned_cols=252 Identities=26% Similarity=0.367 Sum_probs=210.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc-eEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD-FKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 632 (869)
+.+..+.||+|..|+||+|+++.+++.+|+|++... +....+++.+|++++++.+||+||.++|.|... . ...
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~-----~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN-----GEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC-----CceEE
Confidence 455678999999999999999999999999999533 445568899999999999999999999998754 4 699
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
|+||||++|+|.++++..+ .+++....+|+.+|++||.|||+ + +||||||||+|||++..|++||||||.
T Consensus 155 I~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred eehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccc
Confidence 9999999999999998764 38999999999999999999996 6 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+..+... .....+||..|||||.+.+..|+.++||||||++++|+++|+.||...........+....+.
T Consensus 226 S~~lvnS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv 295 (364)
T KOG0581|consen 226 SGILVNS----------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV 295 (364)
T ss_pred cHHhhhh----------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh
Confidence 9876543 334578999999999999999999999999999999999999999765222223323222222
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIE-ECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.+.. +..++ .+++++..++..|+++||.+|||+.|+++.
T Consensus 296 ~~pp-----------------------P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 296 DEPP-----------------------PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred cCCC-----------------------CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1110 01111 367789999999999999999999999873
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-46 Score=374.17 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=209.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-------chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-------KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.+.|.+.+.||+|+||.|-+|..+.+|+.||||++++.. .......++|+++|++++|||||++.+++...
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~-- 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP-- 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC--
Confidence 456888999999999999999999999999999996321 11233467999999999999999999996554
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---C
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---M 702 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~ 702 (869)
+..|+||||++||+|.+.+-.... +.+.....+++|++.|+.|||+. ||+||||||+|||+..+ .
T Consensus 249 ---ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 249 ---DSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred ---CceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcce
Confidence 778999999999999999988764 77788899999999999999999 99999999999999766 6
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC---CCccccchhhhHHHHHHHcCCCCCCcCccC
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE---ASMTGDVYSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~el~tg~~pf~~~~~~ 779 (869)
.+||+|||+|+..+.. ......+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||.+....
T Consensus 317 llKItDFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred EEEecccchhhccccc---------eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence 8999999999987643 4556788999999999988764 334789999999999999999999865443
Q ss_pred CchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 780 GLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....++..+..+. ..++...+..++..++|.+||..||++|||+.|+++.
T Consensus 388 ~sl~eQI~~G~y~------------------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 388 PSLKEQILKGRYA------------------------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred ccHHHHHhcCccc------------------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 2222222221110 1223445677888999999999999999999999874
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-46 Score=373.27 Aligned_cols=202 Identities=27% Similarity=0.532 Sum_probs=183.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|...+.||+|+||+||+|+++.++..||||.+... .+...+.+..|+.+|+.++|||||++++++.+. +.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----DF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----Ce
Confidence 46899999999999999999999999999999999755 455667789999999999999999999997654 79
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC------CcE
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD------MVA 704 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------~~~ 704 (869)
.|+|||||.||+|.+|++..+. +++..++.++.|+|.||++||++ +||||||||+|||++.. -.+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 9999999999999999998863 89999999999999999999999 99999999999999765 468
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
||+|||+|+.+.+.. .....+|++.|||||++...+|+.|+|+||+|+|+|++++|+.||+...
T Consensus 155 KIADFGfAR~L~~~~---------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 155 KIADFGFARFLQPGS---------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred EecccchhhhCCchh---------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 999999999887543 3455789999999999999999999999999999999999999998643
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=388.85 Aligned_cols=260 Identities=30% Similarity=0.449 Sum_probs=211.1
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeE-EEEEEeecccch--hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGML-VAVKVLNLMQKG--ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~-vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
....+.+|+|+||+||+|.+ .|+. ||||++...... ..+.|.+|+.++.+++|||||+++|+|.... ...+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~~ 116 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSLC 116 (362)
T ss_pred hhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CceE
Confidence 34456699999999999999 5666 999999754322 2568999999999999999999999997641 2689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCceeecCCC-cEEEcccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP-VVHGDLKPSNVLLDHDM-VAHVGDFG 710 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kl~Dfg 710 (869)
+||||+++|+|.++++... ...+++..+..++.|||+||.|||+. + ||||||||+|||++.++ ++||+|||
T Consensus 117 iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred EEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCc
Confidence 9999999999999998841 12499999999999999999999999 7 99999999999999998 99999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC--CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT--GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
+++...... ...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||...... ........
T Consensus 190 lsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~~ 260 (362)
T KOG0192|consen 190 LSREKVISK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVVV 260 (362)
T ss_pred cceeecccc--------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHh
Confidence 998765431 1222367999999999999 568999999999999999999999999865431 11111110
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
.. .++..+..++..+..++.+||+.||++||++.|++..|+.+......
T Consensus 261 ~~--------------------------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 261 GG--------------------------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred cC--------------------------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 00 01111223677889999999999999999999999999999886654
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-47 Score=359.87 Aligned_cols=262 Identities=23% Similarity=0.371 Sum_probs=213.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec--ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL--MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..+|++.++||+|+||+||+|+...+|..||.|.++. .+..+......|+.+|++++|||||++++... .++...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchh
Confidence 4568889999999999999999999999999999863 34556678899999999999999999988422 122344
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEEcc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
.+||||||.+|+|.++++..+.. ...+++..+|+++.|++.||.++|++ .++ |+||||||.||+++.+|.+||+|
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeecc
Confidence 89999999999999999876543 34599999999999999999999994 235 89999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+++.+.... ......+|||.||+||.+.+.+|+.||||||+||++|||+.-++||.+. .+.+..+
T Consensus 172 fGL~r~l~s~~--------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~ 238 (375)
T KOG0591|consen 172 FGLGRFLSSKT--------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCK 238 (375)
T ss_pred chhHhHhcchh--------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHH
Confidence 99999887653 3345578999999999999999999999999999999999999999753 3333333
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.+...+.. +...+.++..+..++..|+..||+.||+.-.++..+.
T Consensus 239 KI~qgd~~----------------------~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 239 KIEQGDYP----------------------PLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHHcCCCC----------------------CCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 33221111 1122467788999999999999999998655554443
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-45 Score=385.46 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=211.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.+|...+.||+|||+.||++++..+|..||+|++.+. .....+...+|++|.+.++|||||+++++| ++.+.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCCc
Confidence 5799999999999999999999889999999999652 345567889999999999999999999995 45599
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
+|||.|+|+.++|..++++.. ++++.+++.+.+||+.||.|||+. +|+|||||..|+|++++.++||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 999999999999999999654 499999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+|..+..+. ......+|||.|+|||++.....+..+||||+|||+|.|+.|++||+.. .+.+....+
T Consensus 164 LAt~le~~~--------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~I 230 (592)
T KOG0575|consen 164 LATQLEYDG--------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKI 230 (592)
T ss_pred eeeeecCcc--------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHH
Confidence 999876543 4456688999999999999989999999999999999999999999752 122222221
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... +. ..+.....+..+||.++|+.||.+|||+++|+..
T Consensus 231 k~~---~Y---------------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 231 KLN---EY---------------------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred Hhc---Cc---------------------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 100 00 0111334556799999999999999999999863
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.4e-45 Score=351.14 Aligned_cols=275 Identities=19% Similarity=0.286 Sum_probs=205.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+.|+...++|+|+||+||+++++.+|+.||||++-... +...+-..+|+++|++++|+|+|.++++|.. ....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr-----krkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR-----KRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh-----ccee
Confidence 35778889999999999999999999999999995332 3344667999999999999999999999654 4889
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++|+|||+. ++.+-+..... .++...+.++++|++.|+.|+|++ +++||||||+||||+.+|.+||||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~-----G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPN-----GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhccC-----CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999987 66566666554 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH--HHhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL--HEFSK 788 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~--~~~~~ 788 (869)
|+.+.... ...+..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+..+-+..+ .....
T Consensus 148 AR~L~~pg--------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 148 ARTLSAPG--------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred hHhhcCCc--------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 99876422 33455678999999999887 679999999999999999999999987643221111 01111
Q ss_pred hhcccccccccCc--cchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDP--SLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...+. ...++.. .+.+..-........ .....+.....+++++..|++.||++|++.+|++.
T Consensus 220 ~L~pr-hq~iF~~N~~F~Gv~lP~~~~~ep-Le~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 220 NLIPR-HQSIFSSNPFFHGVRLPEPEHPEP-LERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCHH-HHHHhccCCceeeeecCCCCCccc-hhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 11111 1111111 000000000000000 01112234457889999999999999999999875
No 11
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-43 Score=335.56 Aligned_cols=277 Identities=21% Similarity=0.286 Sum_probs=213.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.+|...+++|+|.||.||+|++..+|+.||||.++... ++......+|+..|+.++|+||+.+++++.. .+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~-----~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH-----KSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC-----CCce
Confidence 46888899999999999999999999999999997543 2334678999999999999999999999655 4788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
.+|+|||+. +|+..++.... .++..++..++.++++|++|+|++ .|+|||+||.|+|++.+|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999977 99999998765 499999999999999999999999 899999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
|+.+.... ......+-|.+|+|||.+.|. .|+..+||||.|||+.||+-|.+-|.+..+- ..+....+..
T Consensus 148 Ar~f~~p~--------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-dQL~~If~~L 218 (318)
T KOG0659|consen 148 ARFFGSPN--------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-DQLSKIFRAL 218 (318)
T ss_pred hhccCCCC--------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-HHHHHHHHHc
Confidence 99887654 222333679999999988775 5999999999999999999998887653221 1111112221
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
-.....++.+-....++..-..............+.....+++.+|+.+||.+|+|+.|+++.
T Consensus 219 GTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111122222222222222111111111222334556677999999999999999999999864
No 12
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-44 Score=374.97 Aligned_cols=258 Identities=30% Similarity=0.472 Sum_probs=213.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+.+...+.||+|.||.||.|.+. ....||+|.++... ...+.|.+|+++|++++|++||+++++|... +..+|
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyI 278 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYI 278 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEE
Confidence 34556789999999999999994 44589999997542 2347788999999999999999999999764 46899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|||||+.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|||+|+
T Consensus 279 VtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred EEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccc
Confidence 9999999999999998332 2488999999999999999999999 99999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...++.. .......-...|.|||.+..+.++.|||||||||+|||++| |+.||..+. ..+..+.+
T Consensus 352 ~~~d~~Y-------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-----n~ev~~~l-- 417 (468)
T KOG0197|consen 352 LIGDDEY-------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-----NEEVLELL-- 417 (468)
T ss_pred ccCCCce-------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-----HHHHHHHH--
Confidence 5554431 11222334678999999999999999999999999999999 899987543 22322222
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.++.+.+.++.||..+.++|..||+.+|++|||++.+...++.+...
T Consensus 418 ---------------------e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 418 ---------------------ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---------------------hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 12344556667999999999999999999999999999888887654
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-44 Score=367.92 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=214.5
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec---ccchhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL---MQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.+...+|.+.+.||+|+|++|++|+...+++.||||++.+ ..+...+....|-++|.+| .||.|++++..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 3456789999999999999999999999999999999953 2344457788999999999 899999999884
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
++....|+|+||+++|+|.++|++.+. +++...+.++.+|+.|++|||++ |||||||||+|||+|++|++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 455899999999999999999999864 89999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCc-----cccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 706 VGDFGLAKFLPARPLDTV-----VETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~-----~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
|+|||.|+.+.+...... .........++||..|.+||++..+..++.+|+||||||+|+|+.|++||.... +.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-ey 293 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-EY 293 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-HH
Confidence 999999999876543311 111112256899999999999999999999999999999999999999997532 22
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..+.+.....+ ..++..++.+.+|+.+.|..||.+|+|++||.+
T Consensus 294 liFqkI~~l~y----------------------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 294 LIFQKIQALDY----------------------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHHHHhcc----------------------------cCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 23333222111 011123355779999999999999999988865
No 14
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=374.50 Aligned_cols=408 Identities=22% Similarity=0.241 Sum_probs=314.9
Q ss_pred cCChhhhhccCCcCEEeccCCcCccccCcccccC--cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcc
Q 002897 12 DIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNL--SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPS 89 (869)
Q Consensus 12 ~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~ 89 (869)
+.|+...| +-..||++++.|..+....+.++ ..-+.||+++|+|..+.+..|.++++|+.++|..|.++ .+|..
T Consensus 45 ~cpa~c~c---~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f 120 (873)
T KOG4194|consen 45 ECPATCPC---NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRF 120 (873)
T ss_pred cCCCcCCC---CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccc
Confidence 45655543 45667777777764433334333 23345777777777777777777777777777777777 55655
Q ss_pred cccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCC
Q 002897 90 IYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNL 169 (869)
Q Consensus 90 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 169 (869)
.....+|+.|+|.+|.|+ ++....++.++.|+.|+|+.|.|+.+.-.+|..-.++++|+|++|.|+.+..+.|.++.+|
T Consensus 121 ~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL 199 (873)
T KOG4194|consen 121 GHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSL 199 (873)
T ss_pred cccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchh
Confidence 555556777777777776 6666666777777777777777776655666666677777777777776666666666666
Q ss_pred CEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCC
Q 002897 170 SVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLN 249 (869)
Q Consensus 170 ~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 249 (869)
..|.|++|+|+.++.. .|+++++|+.|+|..|+|. -..--.|..+++|+
T Consensus 200 ~tlkLsrNrittLp~r------~Fk~L~~L~~LdLnrN~ir-------------------------ive~ltFqgL~Sl~ 248 (873)
T KOG4194|consen 200 LTLKLSRNRITTLPQR------SFKRLPKLESLDLNRNRIR-------------------------IVEGLTFQGLPSLQ 248 (873)
T ss_pred eeeecccCcccccCHH------Hhhhcchhhhhhcccccee-------------------------eehhhhhcCchhhh
Confidence 6666666666666543 4555666666666555554 23344577888888
Q ss_pred eeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcc
Q 002897 250 SIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNK 329 (869)
Q Consensus 250 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 329 (869)
.|.|..|.+.......|..+.++++|+|+.|++...-..++.+++.|+.|++++|.|..+.++++.-+++|++|+|++|+
T Consensus 249 nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~ 328 (873)
T KOG4194|consen 249 NLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNR 328 (873)
T ss_pred hhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccc
Confidence 88899999888888889999999999999999998888899999999999999999998889999999999999999999
Q ss_pred cCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCC---ccccCCCCCcEEEeeCccccCC
Q 002897 330 LDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIP---GTLSACTSLEYVKMQDNSFSGS 406 (869)
Q Consensus 330 l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~ 406 (869)
|+ .++++.+..+..++.|+|++|.++..-..+|..+++|+.|||++|.+++.+. ..|.++++|+.|++.+|+|...
T Consensus 329 i~-~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I 407 (873)
T KOG4194|consen 329 IT-RLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSI 407 (873)
T ss_pred cc-cCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeec
Confidence 98 7788888888888899999999987777889999999999999999987654 3588899999999999999955
Q ss_pred CCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCC
Q 002897 407 IPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 407 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 457 (869)
...+|.+++.|++|||.+|.|..+-|++|..+ .|++|-+..-.|-+.+.-
T Consensus 408 ~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCql 457 (873)
T KOG4194|consen 408 PKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQL 457 (873)
T ss_pred chhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEeccH
Confidence 55799999999999999999999999999999 899998877666655543
No 15
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=366.33 Aligned_cols=278 Identities=20% Similarity=0.261 Sum_probs=210.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhh-HHHHHHHHHHHhCC-CCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGAL-KSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|.+.++||.|.||.||+|+...+|..||||.++..-.... ..-.+|+..|++++ |||||++.+++.+. ...
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~----~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN----DRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc----Cce
Confidence 4578999999999999999999999999999999964432222 23379999999998 99999999997654 238
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++|||||+. +|++.++.++. .+++.+++.|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||
T Consensus 85 L~fVfE~Md~-NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 85 LYFVFEFMDC-NLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred EeeeHHhhhh-hHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 9999999966 99999998854 499999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCccc-CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG-TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+.+... ...+..+.|.+|+|||++ +.+-|+.+.||||+|||++|+.+-++.|.+..+-+ .+-.....
T Consensus 156 LARev~Sk---------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KIc~V 225 (538)
T KOG0661|consen 156 LAREVRSK---------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKICEV 225 (538)
T ss_pred cccccccC---------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHHHHH
Confidence 99977554 345567889999999975 45678999999999999999999999987643321 12222221
Q ss_pred hcccccccccC-ccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVD-PSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.-.....++.. ..+.....-. ..............+..+..+++.+|++|||.+||||.|.++.
T Consensus 226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111110 0000000000 0111111112223367888999999999999999999999874
No 16
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=7.2e-47 Score=375.46 Aligned_cols=447 Identities=26% Similarity=0.400 Sum_probs=334.5
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++|.++ .+-.++- .+..+.+|++++|+++ ..|.+++.+.+++.|+.++|+++ .+|..++.+.+|+.|+.++|.
T Consensus 50 lils~N~l~-~l~~dl~-nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~ 125 (565)
T KOG0472|consen 50 LILSHNDLE-VLREDLK-NLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNE 125 (565)
T ss_pred hhhccCchh-hccHhhh-cccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccc
Confidence 456667776 5555554 5677777777777777 66777777777777777777777 667777777777777777777
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
+. .+|+.++.+..|+.|+..+|++. ++|.+ +..+.+|..|++.+|++....|..+. ++.|++||.-.|.++ ..|.
T Consensus 126 ~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~-~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP~ 200 (565)
T KOG0472|consen 126 LK-ELPDSIGRLLDLEDLDATNNQIS-SLPED-MVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLPP 200 (565)
T ss_pred ee-ecCchHHHHhhhhhhhccccccc-cCchH-HHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCCh
Confidence 77 56667777777777777777776 66644 45666777777777777755444444 777777777777654 3455
Q ss_pred CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhh-hccccceEEEecCCcccccCCc
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLA-NLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
.+++|.+|..|+|.+|+|..+| .|.+|+.|++|+++.|+|. .+|.... ++. ++..|||.+|+++ ..|+
T Consensus 201 ~lg~l~~L~~LyL~~Nki~~lP--------ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~-~l~vLDLRdNklk-e~Pd 269 (565)
T KOG0472|consen 201 ELGGLESLELLYLRRNKIRFLP--------EFPGCSLLKELHVGENQIE-MLPAEHLKHLN-SLLVLDLRDNKLK-EVPD 269 (565)
T ss_pred hhcchhhhHHHHhhhcccccCC--------CCCccHHHHHHHhcccHHH-hhHHHHhcccc-cceeeeccccccc-cCch
Confidence 6777777777777777776665 2667777777777777776 5555555 444 3777777777777 6677
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccC------------------------------------
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHG------------------------------------ 284 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------------------ 284 (869)
.+.-+++|++|++++|.|+ ..|..++++ .|+.|.+.+|.+..
T Consensus 270 e~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 270 EICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 7777777777777777776 566667777 67777777776541
Q ss_pred -c-CCCC---CCCCccccceecccccccccCCcCccCccc---cceeeccCcccCCCCCccccccccccceecccCCccc
Q 002897 285 -Y-IPSS---LGNLTMLTLLALEINNLQGKIPSSLGNCTS---LIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLS 356 (869)
Q Consensus 285 -~-~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~ 356 (869)
. .+.. ...+.+.+.|+++.-+++ .+|+....-.. .+..+++.|++. .+|............+.+++|.++
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is 425 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS 425 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc
Confidence 0 1111 123456788888888888 56665554444 788999999998 788888888888888889999887
Q ss_pred CCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccc
Q 002897 357 GSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLE 436 (869)
Q Consensus 357 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 436 (869)
.+|..++.+++|..|+|++|.+. .+|..++.+..|+.|++|.|+|. .+|..+..+..|+.+-.++|++....|..+.
T Consensus 426 -fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~ 502 (565)
T KOG0472|consen 426 -FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLK 502 (565)
T ss_pred -cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhh
Confidence 88899999999999999999998 78999999999999999999998 8899988888888888888999877677799
Q ss_pred cccccCeeccccccCcccCCCCCccCCCccccccCCccc
Q 002897 437 NLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKL 475 (869)
Q Consensus 437 ~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 475 (869)
+|.+|..|||.+|.+...+|..|.+.+++++.+.|||+.
T Consensus 503 nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 503 NMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 999999999999999988888899999999999999874
No 17
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.2e-47 Score=377.92 Aligned_cols=432 Identities=32% Similarity=0.464 Sum_probs=379.8
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
|+++++|+++ ++|..++ .+.+++.|+.++|+++ .+|+.+..+.+|+.|+.++|++. .+|+.++.+..|..|+..+|
T Consensus 72 vl~~~~n~l~-~lp~aig-~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N 147 (565)
T KOG0472|consen 72 VLNVHDNKLS-QLPAAIG-ELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNN 147 (565)
T ss_pred EEEeccchhh-hCCHHHH-HHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcccc
Confidence 6789999999 9999998 7999999999999999 89999999999999999999999 88999999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+|+ ..|+.+.++.+|..|++.+|++. .+|++.+. +++|++|+...|-++ .+|..++.+.+|+.|+|..|+|...+
T Consensus 148 ~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP- 222 (565)
T KOG0472|consen 148 QIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP- 222 (565)
T ss_pred ccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCC-
Confidence 999 67999999999999999999998 88888777 999999999999998 57889999999999999999997544
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
.|.++..|++|+++.|+|+.++++ ..+.+++|..|||++|+++ ..|+.++-+.+ |..||+|+|.|+ ..|.
T Consensus 223 -ef~gcs~L~Elh~g~N~i~~lpae------~~~~L~~l~vLDLRdNklk-e~Pde~clLrs-L~rLDlSNN~is-~Lp~ 292 (565)
T KOG0472|consen 223 -EFPGCSLLKELHVGENQIEMLPAE------HLKHLNSLLVLDLRDNKLK-EVPDEICLLRS-LERLDLSNNDIS-SLPY 292 (565)
T ss_pred -CCCccHHHHHHHhcccHHHhhHHH------Hhcccccceeeeccccccc-cCchHHHHhhh-hhhhcccCCccc-cCCc
Confidence 899999999999999999999875 6789999999999999999 89999998876 999999999999 7899
Q ss_pred cccCCCCCCeeecccCcceec-------------------------------------CCc----cccCCCCCCEEEccC
Q 002897 241 GLGNLVHLNSIAMEGNQLIGT-------------------------------------VPP----EIGWLKNLQSLYLNS 279 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~-------------------------------------~~~----~~~~l~~L~~L~L~~ 279 (869)
.++++ +|+.|.+.||.+..+ .|. ....+.+.+.|+++.
T Consensus 293 sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~ 371 (565)
T KOG0472|consen 293 SLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSD 371 (565)
T ss_pred ccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccc
Confidence 99999 999999999998321 011 122345688999999
Q ss_pred ccccCcCCCCCCCCc--cccceecccccccccCCcCccCccccc-eeeccCcccCCCCCccccccccccceecccCCccc
Q 002897 280 NFLHGYIPSSLGNLT--MLTLLALEINNLQGKIPSSLGNCTSLI-MLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLS 356 (869)
Q Consensus 280 N~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~ 356 (869)
-+++.++.+.|.... -++..+++.|++. ++|..+..+..+. .+.+++|.+. .+ +.+....+.+..|+|++|-+.
T Consensus 372 ~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv-~~~l~~l~kLt~L~L~NN~Ln 448 (565)
T KOG0472|consen 372 KQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FV-PLELSQLQKLTFLDLSNNLLN 448 (565)
T ss_pred cccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cc-hHHHHhhhcceeeecccchhh
Confidence 999844444443322 2899999999999 8999999988874 5666666665 44 444555566779999999998
Q ss_pred CCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccc
Q 002897 357 GSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLE 436 (869)
Q Consensus 357 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 436 (869)
.+|.+++.+..|+.|++|.|+|. .+|..+..+..|+.+-.++|++....|..+.++.+|++|||.+|.+. ++|..++
T Consensus 449 -~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~Lg 525 (565)
T KOG0472|consen 449 -DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILG 525 (565)
T ss_pred -hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhc
Confidence 89999999999999999999999 89999999999999999999999666666999999999999999998 8999999
Q ss_pred cccccCeeccccccCcccCCCCC
Q 002897 437 NLSFLEYLNLSYNHFEGEVPKKG 459 (869)
Q Consensus 437 ~l~~L~~l~l~~N~l~~~~~~~~ 459 (869)
+|++|++|+++||+|. .++...
T Consensus 526 nmtnL~hLeL~gNpfr-~Pr~~i 547 (565)
T KOG0472|consen 526 NMTNLRHLELDGNPFR-QPRHQI 547 (565)
T ss_pred cccceeEEEecCCccC-CCHHHH
Confidence 9999999999999998 555543
No 18
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-45 Score=378.44 Aligned_cols=387 Identities=21% Similarity=0.234 Sum_probs=347.1
Q ss_pred cccCCCcccccC-----ChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEe
Q 002897 2 FDAQNNKLVGDI-----PVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLN 76 (869)
Q Consensus 2 l~l~~~~~~~~i-----p~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 76 (869)
||++++.+. .+ +..++ ...+.|||++|+|..+.+..|.++++|+++++..|.++ .+|...+...+|+.|+
T Consensus 57 ldcs~~~le-a~~~~~l~g~lp---~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 57 LDCSDRELE-AIDKSRLKGFLP---SQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred eecCccccc-cccccccCCcCc---cceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 788899888 65 44443 56788999999999999999999999999999999999 8898777788899999
Q ss_pred CcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccc
Q 002897 77 IGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFI 156 (869)
Q Consensus 77 L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~ 156 (869)
|.+|.|+++-...+..++.|+.||||.|.|+ .+|...|..-.++++|+|++|.|+......|..+.+|..|.|++|+|+
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit 210 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT 210 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc
Confidence 9999999988899999999999999999998 899888988899999999999999999999999999999999999999
Q ss_pred cccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccc
Q 002897 157 GKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSG 236 (869)
Q Consensus 157 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~ 236 (869)
.+.+..|++|++|+.|+|.+|+|.-+.. ..|.++++|+.|.|..|.+....-..|..+.. +++|+|+.|++..
T Consensus 211 tLp~r~Fk~L~~L~~LdLnrN~irive~------ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~k-me~l~L~~N~l~~ 283 (873)
T KOG4194|consen 211 TLPQRSFKRLPKLESLDLNRNRIRIVEG------LTFQGLPSLQNLKLQRNDISKLDDGAFYGLEK-MEHLNLETNRLQA 283 (873)
T ss_pred ccCHHHhhhcchhhhhhccccceeeehh------hhhcCchhhhhhhhhhcCcccccCcceeeecc-cceeecccchhhh
Confidence 9999999999999999999999987642 36999999999999999999888888888886 9999999999998
Q ss_pred cCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccC
Q 002897 237 TIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGN 316 (869)
Q Consensus 237 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 316 (869)
.-..++.+++.|+.|+|++|.|..+.++.....++|++|+|++|+|+...+++|..+..|+.|+|++|+|+-....+|..
T Consensus 284 vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~ 363 (873)
T KOG4194|consen 284 VNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVG 363 (873)
T ss_pred hhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999777788999
Q ss_pred ccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEE
Q 002897 317 CTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYV 396 (869)
Q Consensus 317 l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 396 (869)
+.+|++|||++|.|...+.+ -...|.+++.|+.|+|.+|++....-.+|.++.+|+.|
T Consensus 364 lssL~~LdLr~N~ls~~IED----------------------aa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~L 421 (873)
T KOG4194|consen 364 LSSLHKLDLRSNELSWCIED----------------------AAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHL 421 (873)
T ss_pred hhhhhhhcCcCCeEEEEEec----------------------chhhhccchhhhheeecCceeeecchhhhccCccccee
Confidence 99999999999998854332 22457778888999999999986666688889999999
Q ss_pred EeeCccccCCCCccccccccccEEEccC
Q 002897 397 KMQDNSFSGSIPPSLNFLKSIKVLDLSS 424 (869)
Q Consensus 397 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 424 (869)
+|.+|.|...-|.+|..+ .|+.|.+..
T Consensus 422 dL~~NaiaSIq~nAFe~m-~Lk~Lv~nS 448 (873)
T KOG4194|consen 422 DLGDNAIASIQPNAFEPM-ELKELVMNS 448 (873)
T ss_pred cCCCCcceeecccccccc-hhhhhhhcc
Confidence 999999888888888888 788776544
No 19
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8e-43 Score=347.73 Aligned_cols=243 Identities=26% Similarity=0.364 Sum_probs=203.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.++||+|+||.||.++.+.+++.+|+|++++. .....+....|..++.+++||.||++... |++.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccCC
Confidence 56899999999999999999999999999999999643 33456778999999999999999999887 55669
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+|+||+.||.|...+.+.+. +++..++-++.+|+.||.|||++ ||||||+||+|||+|.+|+++|+||
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 99999999999999999997663 89999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+..-... ..+...+||+.|||||++.+..|+.++|.||+|+++|||++|.+||... ....+.+.
T Consensus 170 gL~k~~~~~~--------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~~~ 236 (357)
T KOG0598|consen 170 GLCKEDLKDG--------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMYDK 236 (357)
T ss_pred ccchhcccCC--------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHHHH
Confidence 9998543322 3445678999999999999999999999999999999999999999753 22333333
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM 845 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 845 (869)
+....... .+.-...+..+++.+.+..||++|.
T Consensus 237 I~~~k~~~-----------------------~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 237 ILKGKLPL-----------------------PPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HhcCcCCC-----------------------CCccCCHHHHHHHHHHhccCHHHhc
Confidence 32222000 0011234567899999999999996
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-42 Score=357.07 Aligned_cols=278 Identities=22% Similarity=0.308 Sum_probs=213.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+.|+.+++||+|.||.||+|++..+|+.||+|.++... ++......+|+.||++++||||+++.+...+. .....
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCceE
Confidence 45777789999999999999999999999999997554 55567778999999999999999999987654 24689
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
|+|+|||+. ||..++....- .+++.++..++.|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~v-----kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGV-----KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccc-hhhhhhcCCCc-----ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 999999988 99999887654 399999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
|+++..... ...+..+-|.+|+|||.+.|. .|+.++|+||.|||+.||++|++.|.+..+- ..+..+.+..
T Consensus 265 Ar~y~~~~~-------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfklc 336 (560)
T KOG0600|consen 265 ARFYTPSGS-------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFKLC 336 (560)
T ss_pred eeeccCCCC-------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHHHh
Confidence 998766432 335567789999999998876 5999999999999999999999999764322 1222222111
Q ss_pred c--ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 L--PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
- .+..+...+-.....+......+ ...++.....+....+|+..+|..||.+|.||.++++
T Consensus 337 GSP~e~~W~~~kLP~~~~~kp~~~y~-r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 337 GSPTEDYWPVSKLPHATIFKPQQPYK-RRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCCChhccccccCCcccccCCCCccc-chHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 11111111100000111100000 0112234455677889999999999999999999875
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=352.32 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=207.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|...+.||+|+||+||++.+..+|+..|||.+...+....+.+.+|+.+|++++|||||+++|.....+ + ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 345778899999999999999999889999999997654444677899999999999999999999744321 1 3689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~ 711 (869)
+.|||+++|+|.+++...+. .+++..++.+++||++||+|||++ |||||||||+|||++. ++.+||+|||.
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 99999999999999998764 299999999999999999999999 9999999999999999 79999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... ..........||+.|||||++..+ ....++||||+||++.||+||++||... .+ .........
T Consensus 165 a~~~~~~~-----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~--~~~~~~~ig 236 (313)
T KOG0198|consen 165 AKKLESKG-----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FE--EAEALLLIG 236 (313)
T ss_pred cccccccc-----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cc--hHHHHHHHh
Confidence 98766411 111233457799999999999854 3446999999999999999999998753 00 011111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
..... +..++..+....+++..|+..||++||||+|+++.-..
T Consensus 237 ~~~~~-----------------------P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 237 REDSL-----------------------PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ccCCC-----------------------CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 00000 01112345567799999999999999999999986544
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=344.75 Aligned_cols=266 Identities=21% Similarity=0.309 Sum_probs=213.5
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..++|+....||.|..++||+|+....++.||||++.... ....+.+++|+..++.++||||++++..|... ..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~-----~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD-----SE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec-----ce
Confidence 3468999999999999999999999999999999997543 23368899999999999999999999987654 88
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+||+||.+|++.+.++..... .+++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.|||+|||
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~----Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPD----GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccc----cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCce
Confidence 99999999999999999887643 499999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
.+..+........ ......+||+.|||||++.. ..|+.|+||||||++..|+.+|..||.........+...-.
T Consensus 172 vsa~l~~~G~R~~----~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn 247 (516)
T KOG0582|consen 172 VSASLFDSGDRQV----TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN 247 (516)
T ss_pred eeeeecccCceee----EeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence 9877665432111 11166789999999999543 35999999999999999999999999865443222222111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. +.......| .+........+.+++..|++.||++||||+++++
T Consensus 248 ~p-p~~~t~~~~------------------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 248 DP-PTLLTSGLD------------------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CC-CCcccccCC------------------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 111111111 1112234457889999999999999999999986
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-42 Score=360.75 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=212.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
..|....+||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||++++.|... +..|.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeEE
Confidence 4577788999999999999999999999999999887777778889999999999999999999986543 78999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|||||+||+|.+.+.... +++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||++.
T Consensus 348 VMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 999999999999998765 89999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.+.... ......+||+.|||||+.....|++|.||||||++++||+-|++||-.. ..+.........+
T Consensus 418 qi~~~~--------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAlyLIa~ng 485 (550)
T KOG0578|consen 418 QISEEQ--------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRALYLIATNG 485 (550)
T ss_pred cccccc--------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHHHHHhhcC
Confidence 776543 3556788999999999999999999999999999999999999998531 1111111111000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .....++..+..+.+++.+||..||++||+|.|+++
T Consensus 486 -~---------------------P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 486 -T---------------------PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred -C---------------------CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 0 011123345677899999999999999999999987
No 24
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.4e-42 Score=376.88 Aligned_cols=268 Identities=28% Similarity=0.450 Sum_probs=221.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
..+....+.||+|+||.||+|+.. .+...||||.++..... ...+|++|++.+..++|||||+++|+|...
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--- 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG--- 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC---
Confidence 345667789999999999999874 34567999999866555 778999999999999999999999999875
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLE--------VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
+..++|+|||..|||.+|+....+... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||
T Consensus 562 --~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 562 --DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLV 636 (774)
T ss_pred --CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhcee
Confidence 789999999999999999987654432 23489999999999999999999999 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCc
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMF 777 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~ 777 (869)
.++..|||+|||+++.+-..+.. .......-..+|||||.+..++++++||||||||++||+++ |+.||.+..
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYY------k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYY------KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred ccceEEEecccccchhhhhhhhh------cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 99999999999999866443321 11223344789999999999999999999999999999999 999987543
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
. .+.++.+..+.+ -+.++.||.++++||..||+..|++||+++||-..|++.
T Consensus 711 n-----~EVIe~i~~g~l-----------------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 711 N-----QEVIECIRAGQL-----------------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred h-----HHHHHHHHcCCc-----------------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 3 233333322221 223457899999999999999999999999999999987
Q ss_pred HHhhh
Q 002897 858 REAFV 862 (869)
Q Consensus 858 ~~~~~ 862 (869)
.++-.
T Consensus 763 ~~~s~ 767 (774)
T KOG1026|consen 763 AQASP 767 (774)
T ss_pred HhcCc
Confidence 76543
No 25
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-42 Score=324.96 Aligned_cols=278 Identities=20% Similarity=0.247 Sum_probs=222.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|||+.||+++...+++.||+|++.....+..+..++|++..++++|||++++++++....-++....
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 35689999999999999999999999999999999988777788999999999999999999999998876655667789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
|++++|+..|+|.+.+...... ...+++.++++|+.++++||++||+. .|+++||||||.||++.+++.++|.|||.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~k--g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIK--GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEeehhccccHHHHHHHHhhc--CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 9999999999999999876543 33599999999999999999999998 45699999999999999999999999999
Q ss_pred cccCCCCCCCCcc-ccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 712 AKFLPARPLDTVV-ETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 712 a~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
++..+-....... ..-........|..|+|||.+. +...++++|||||||++|+|+.|..||+.....+.++.-.+
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv 255 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV 255 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence 9765432111000 0001122334789999999864 44579999999999999999999999987665544332211
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.. ..+.- +....+++.+.+++..|++.||.+||++.|++..+..+
T Consensus 256 ~n---~q~s~----------------------P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 256 QN---AQISI----------------------PNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred ec---ccccc----------------------CCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11 00000 00012567788999999999999999999999988764
No 26
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-42 Score=360.33 Aligned_cols=268 Identities=27% Similarity=0.418 Sum_probs=213.8
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID 624 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 624 (869)
.++....+++.+..+||+|+||+||+|.|. ..||||++... .++..+.|++|+.++++-+|.||+-+.|||..+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 444555667778899999999999999984 46999999644 345678999999999999999999999998764
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
...||+.+|+|-+|+.+++..+.+ +...+.+.||+|||+||.|||.+ +|||||+|..|||+.++++|
T Consensus 461 -----~~AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 461 -----PLAIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred -----ceeeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 349999999999999999987654 88999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC---CCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS---EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
||+|||++......... .......|...|||||+++.. +|++.+||||||+|+|||+||..||.....+ .
T Consensus 528 kIgDFGLatvk~~w~g~------~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d-q 600 (678)
T KOG0193|consen 528 KIGDFGLATVKTRWSGE------QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD-Q 600 (678)
T ss_pred EEecccceeeeeeeccc------cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh-h
Confidence 99999999765443211 222334578899999987643 6899999999999999999999999732221 1
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
.+-..-+... -+.. ......++.++.+|+..||.++|++||.+.+|+..|+.+....
T Consensus 601 IifmVGrG~l--------~pd~---------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 601 IIFMVGRGYL--------MPDL---------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred eEEEeccccc--------Cccc---------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 1111111110 0100 0111257788999999999999999999999999998887643
No 27
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=337.61 Aligned_cols=284 Identities=21% Similarity=0.282 Sum_probs=217.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEee--cccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLN--LMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
....|...+.||+|+||.|+.|.++.+|+.||||.+. ....-..++..+|+.+++.++|+||+.+.+++.....+.-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456777899999999999999999999999999986 44555678899999999999999999999998875556668
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+|+|+|+ .+|.+.++.... ++...+..+.+|+++||+|+|+. +|+|||+||+|++++.+..+||+||
T Consensus 100 DvYiV~elMe-tDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 8999999994 499999998764 89999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+...... .....+..+.|.+|+|||++.. ..|+.+.||||.|||+.||++|++-|.+...- ..+.....
T Consensus 170 GLAR~~~~~~------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v-~Ql~lI~~ 242 (359)
T KOG0660|consen 170 GLARYLDKFF------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV-HQLQLILE 242 (359)
T ss_pred cceeeccccC------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH-HHHHHHHH
Confidence 9999876531 1134456778999999998654 57999999999999999999999998753211 11111111
Q ss_pred hh--cccc-cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MV--LPEK-VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~--~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .++. +..+-......-...-....+..-....+...+..++|+.+|+..||.+|+|++|.++
T Consensus 243 ~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 243 LLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred hcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11 1111 1111111122211111111111111222344567889999999999999999999987
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.3e-41 Score=351.61 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=211.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.. +.+.+.+.+|++|+++++||||+.++++| +...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 47888999999999999999999999999999997544 34567899999999999999999999985 455899
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++|+||+.| +|..++..... ++++.+..++.+++.||.|||+. +|.|||+||.||+++..|.+|+||||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999977 99999998764 99999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
|+.+.... .......||+.|||||+..+.+|+..+|.||+|||+||+++|++||.. ..+.+..+.+.
T Consensus 147 Ar~m~~~t--------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv~~I~ 213 (808)
T KOG0597|consen 147 ARAMSTNT--------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLVKSIL 213 (808)
T ss_pred hhhcccCc--------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHHHHHh
Confidence 99876543 344567899999999999999999999999999999999999999963 23334444332
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+... .+......+..++...+..||.+|.|..+++.
T Consensus 214 ~d~v~------------------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 214 KDPVK------------------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cCCCC------------------------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 22111 11145567889999999999999999999876
No 29
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-41 Score=327.65 Aligned_cols=278 Identities=20% Similarity=0.288 Sum_probs=210.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|+..++|++|.||.||+|+++.+++.||+|+++... .+..-...+|+.++.+.+|||||.+-.+..... .+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---cce
Confidence 457888999999999999999999999999999997443 233345689999999999999999999876543 366
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+|||||+. +|...+...+. ++...++.-+..|+++|++|||.. .|+|||+||+|+|++..|.+||+|||
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 9999999988 99999998774 489999999999999999999999 89999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+.++... ...+..+-|.+|+|||.+.+. .|+++.|+||+|||+.|++++++.|.+..+-+. +....+.
T Consensus 223 LAR~ygsp~--------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQ-l~~If~l 293 (419)
T KOG0663|consen 223 LAREYGSPL--------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQ-LDKIFKL 293 (419)
T ss_pred hhhhhcCCc--------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHH-HHHHHHH
Confidence 999887653 345566789999999998776 589999999999999999999999986543322 2222211
Q ss_pred h-ccc-cc-ccccCccchhhhhhcccccCCCccchHHH--HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 V-LPE-KV-MEIVDPSLLLEVRANNSMSRGGERVKIEE--CLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~-~~~-~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .|. .+ .................... ..+..+.. ..+.-++++...+.+||.+|.||+|.++
T Consensus 294 lGtPte~iwpg~~~lp~~k~~~f~~~pyn-~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 294 LGTPSEAIWPGYSELPAVKKMTFSEHPYN-NLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred hCCCccccCCCccccchhhccccCCCCch-hhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1 111 11 11111111100000000000 00011111 2356679999999999999999999875
No 30
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=337.76 Aligned_cols=278 Identities=21% Similarity=0.298 Sum_probs=204.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
-.|...+++|+|+||.||+|...++++.||||.+-... +.-.+|+++|++++|||||++.-++....-.+.....+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 35777899999999999999999999999999884322 33468999999999999999998887653233446679
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEEEcccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAHVGDFGLA 712 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 712 (869)
|||||+. +|.++++..... ...++...+.-+..||.+||+|||+. +|+||||||.|+|+|.+ |.+||||||.|
T Consensus 100 VleymP~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHhchH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 9999987 999999863211 12388889999999999999999998 99999999999999977 89999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+.+..+. .......|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.... ..+....+..-
T Consensus 174 K~L~~~e---------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-dQL~eIik~lG 243 (364)
T KOG0658|consen 174 KVLVKGE---------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-DQLVEIIKVLG 243 (364)
T ss_pred eeeccCC---------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-HHHHHHHHHhC
Confidence 9886653 22345679999999998876 5999999999999999999999999863222 22222222221
Q ss_pred cc--ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PE--KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. +......+... +...................+.+..+++.++++++|.+|.++.|++.
T Consensus 244 ~Pt~e~I~~mn~~y~-~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 244 TPTREDIKSMNPNYT-EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CCCHHHHhhcCcccc-cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11 00000111100 00000000011111122345567889999999999999999999985
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-41 Score=352.94 Aligned_cols=250 Identities=20% Similarity=0.303 Sum_probs=211.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.+-|..++.||.|+.|.|-+|++..+|+.+|||++... .......+.+|+.||+.+.||||++++++|.. ..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~-----~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWEN-----KQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeecc-----Cc
Confidence 35688899999999999999999999999999999644 22234678899999999999999999999654 48
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
+.|+|.||+++|-|++++...+. +++.+..+++.||+.|+.|+|+. +|+|||+||+|+|+|..+.+||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 99999999999999999988764 89999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|..-.++ ......+|++.|.|||++.|.+| +.++||||+|||+|.|+||+.||++ ..+.....
T Consensus 157 GMAsLe~~g---------klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD-----dNir~LLl 222 (786)
T KOG0588|consen 157 GMASLEVPG---------KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD-----DNIRVLLL 222 (786)
T ss_pred ceeecccCC---------ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC-----ccHHHHHH
Confidence 999865544 33455689999999999999998 6789999999999999999999983 23333332
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.+..+ ..+.+...+.+..+|+.+|+..||++|.|++||++.-
T Consensus 223 KV~~G------------------------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 223 KVQRG------------------------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHHcC------------------------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 22211 1112234567788999999999999999999998753
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-40 Score=352.54 Aligned_cols=251 Identities=23% Similarity=0.359 Sum_probs=206.1
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc----cc-hhhHHHHHHHHHHHhCC-CCccceEEEEeeccc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM----QK-GALKSFLTECEALRSIR-HRNLIKIITICSSID 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 624 (869)
...++|.+.+.||+|+||.|+.|.+..+|+.||+|+++.. .. ...+.+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~- 92 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP- 92 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC-
Confidence 4467899999999999999999999999999999977543 11 23456778999999998 99999999997654
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-Cc
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MV 703 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 703 (869)
...++||||+.+|+|.+++.... ++.+.++..+++|++.|++|+|++ ||+||||||+||+++.+ ++
T Consensus 93 ----~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 93 ----TKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred ----CeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 66999999999999999999843 388999999999999999999999 99999999999999999 99
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CC-ccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-AS-MTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
+||+|||++...... .......+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+..
T Consensus 160 ~Kl~DFG~s~~~~~~--------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~----- 226 (370)
T KOG0583|consen 160 LKLSDFGLSAISPGE--------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS----- 226 (370)
T ss_pred EEEeccccccccCCC--------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----
Confidence 999999999876411 13455678999999999999977 75 7899999999999999999999862
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHH-HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEEC-LVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.............. ..+... ..++..++.+|+..||.+|+|+.|+++
T Consensus 227 ~~~~l~~ki~~~~~------------------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 227 NVPNLYRKIRKGEF------------------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cHHHHHHHHhcCCc------------------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 11111111111100 000111 456789999999999999999999983
No 33
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4e-40 Score=358.05 Aligned_cols=268 Identities=24% Similarity=0.361 Sum_probs=207.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|++.++||+|+||.||+|.+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 468999999999999999999752 346789999986432 23456789999999999 899999999987543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc---------------------------------------------------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL--------------------------------------------------- 654 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 654 (869)
....++||||+++|+|.+++.......
T Consensus 84 --~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 84 --NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred --CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 356899999999999999997643110
Q ss_pred -----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCC
Q 002897 655 -----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSS 729 (869)
Q Consensus 655 -----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 729 (869)
...++++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~------~~ 232 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VR 232 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch------hc
Confidence 013478899999999999999999999 9999999999999999999999999999865432210 11
Q ss_pred CCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhh
Q 002897 730 SSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVR 808 (869)
Q Consensus 730 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 808 (869)
.....++..|+|||++.+..++.++|||||||++|||++ |..||....... .+.........
T Consensus 233 ~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~~~~~~~~~------------- 295 (338)
T cd05102 233 KGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFCQRLKDGTR------------- 295 (338)
T ss_pred ccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHHHHHhcCCC-------------
Confidence 223346788999999998899999999999999999997 999987532211 11111100000
Q ss_pred hcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 809 ANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
...+..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 296 ----------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 296 ----------MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred ----------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 000112345688999999999999999999999999987653
No 34
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=367.14 Aligned_cols=273 Identities=21% Similarity=0.266 Sum_probs=217.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccc-cCC-Cc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSID-FNG-VD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~-~~~-~~ 629 (869)
..++++.++|.+|||+.||.|++...|..||+|++-..++...+...+|+++|++|+ |+|||.+++...... -.+ ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 346778899999999999999998777999999997778888899999999999996 999999999432221 222 36
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
++++.||||++|.|-+++..+-.. .+++.++++|+.|+++|+++||.. .|+|||||||-+|||++.+|+.|||||
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~----~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQT----RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhc----cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 788999999999999999876543 499999999999999999999996 788999999999999999999999999
Q ss_pred cccccCCCCC-CCCccccCCCCCCccCcccccCCccc---CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 710 GLAKFLPARP-LDTVVETPSSSSGIKGTVGYIAPEYG---TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 710 g~a~~~~~~~-~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|.|...-... ....+......-....|+.|+|||++ .+...++|+|||||||+||-|+....||+....-.
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----- 265 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----- 265 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-----
Confidence 9997543332 11111111112234579999999974 56679999999999999999999999997532111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
+++- ....+..+.++..+.+||+.||+.||.+||++.||+..+.+++..-
T Consensus 266 ------------Ilng--------------~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 266 ------------ILNG--------------NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ------------EEec--------------cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 0010 0111222357778999999999999999999999999999887654
No 35
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-41 Score=345.45 Aligned_cols=242 Identities=27% Similarity=0.410 Sum_probs=203.1
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
.+-||.|+.|.||+|+. .++.||||.++. .-..+++-|++++||||+.+.|+|... ..+|||||||
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCC-----ceeEEeeecc
Confidence 46799999999999999 689999998742 223568889999999999999999875 6789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
+.|-|.++++..+. ++......|..+||.||.|||.+ .|||||||.-||||+.+..|||+|||.++...+.
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ 265 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDK 265 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence 99999999998764 88899999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
.....+.||..|||||++...+.++|+||||||||||||+||..||....... ++..+-
T Consensus 266 ---------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----IIwGVG------- 324 (904)
T KOG4721|consen 266 ---------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----IIWGVG------- 324 (904)
T ss_pred ---------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----eEEecc-------
Confidence 23345789999999999999999999999999999999999999997532211 010000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
... ...+.+..|++.+.-|++.||+..|..||++.+++..|.-+..
T Consensus 325 -sNs--------------L~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 325 -SNS--------------LHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred -CCc--------------ccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 000 1123445788899999999999999999999999998875543
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=340.39 Aligned_cols=249 Identities=22% Similarity=0.352 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..|+..+.||+|+||.||+|.+..+++.||+|++... .+...+.+++|+.++..++++||.++++.+... ...+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----TKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----ccHH
Confidence 4577789999999999999999999999999999754 345578899999999999999999999987654 7889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++||||.||++.+.++.... +.+..+.-+.+++..|+.|+|.+ +.+|||||+.||++..+|.+|++|||.+
T Consensus 88 iiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 99999999999999987653 47888889999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
..+.... .....++||+.|||||++.+..|+.|+||||||++.+||++|.+|+........ -..++
T Consensus 159 ~ql~~~~--------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------lflIp 224 (467)
T KOG0201|consen 159 GQLTNTV--------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------LFLIP 224 (467)
T ss_pred eeeechh--------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------EEecc
Confidence 8765543 334678999999999999988999999999999999999999999876443210 01111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .|.+. ..+.+.+.+++..|++.||+.||||.++++
T Consensus 225 k~~----PP~L~------------------~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 225 KSA----PPRLD------------------GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCC----CCccc------------------cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 111 11111 144567889999999999999999999987
No 37
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.8e-40 Score=340.50 Aligned_cols=258 Identities=20% Similarity=0.297 Sum_probs=205.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..++|+..++||+|+||.||+|+-+.+|..+|+|++++.. .+..+.++.|-.+|...++|.||+++.. |++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 5678999999999999999999999999999999997643 4556778999999999999999999987 4556
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
++.|+||||++||++..++..... +++..++.++.+++-|+..+|+. |+|||||||+|+|||..|++||+|
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 999999999999999999988763 99999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCC----------------ccccC-----------------------CCCCCccCcccccCCcccCCCC
Q 002897 709 FGLAKFLPARPLDT----------------VVETP-----------------------SSSSGIKGTVGYIAPEYGTGSE 749 (869)
Q Consensus 709 fg~a~~~~~~~~~~----------------~~~~~-----------------------~~~~~~~gt~~y~aPE~~~~~~ 749 (869)
||++..+....... ..+.+ ......+|||.|||||++.+..
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 99996543211000 00000 0112356999999999999999
Q ss_pred CCccccchhhhHHHHHHHcCCCCCCcCccCC--chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHH
Q 002897 750 ASMTGDVYSFGILLLEMFSRRRPTDSMFHEG--LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLV 827 (869)
Q Consensus 750 ~~~~sDvwslG~il~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (869)
|+..+|.||+|||+|||+.|.+||.+..... ..+..|..... .+...++..
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~---------------------------fP~~~~~s~ 417 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK---------------------------FPEEVDLSD 417 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc---------------------------CCCcCcccH
Confidence 9999999999999999999999997643321 11112211110 001112335
Q ss_pred HHHHHHhhccCCCCCCCCC---HHHHH
Q 002897 828 AVIRIGVVCSMESPTDRMQ---MRDVV 851 (869)
Q Consensus 828 ~l~~li~~cl~~dP~~RPs---~~evl 851 (869)
+..+||.+|+. ||++|.- ++||.
T Consensus 418 eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 418 EAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 67799999999 9999975 55553
No 38
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-40 Score=314.86 Aligned_cols=199 Identities=27% Similarity=0.400 Sum_probs=180.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|+..+.||.|+||.|.+++.+.+|..+|+|++++..- ...+...+|..+|+.+.||.++++++.+.+. .
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~-----~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN-----S 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC-----C
Confidence 4578899999999999999999999999999999975432 3345678999999999999999999986554 8
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||++||.|..++++.+. +++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 89999999999999999998764 89999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
|+|+.+... +...+||+.|+|||.+....++.++|-|||||++|||+.|.+||...
T Consensus 189 GFAK~v~~r-----------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 189 GFAKRVSGR-----------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred cceEEecCc-----------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 999976542 45578999999999999999999999999999999999999999753
No 39
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=332.20 Aligned_cols=273 Identities=26% Similarity=0.361 Sum_probs=209.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHh--CCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRS--IRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
...+..+.+|+|+||.||+|.. +++.||||++.. +..+.+..|-+|++. ++|+||++++++-...+.. ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 3455678999999999999999 679999999964 344778888888775 4899999999986554322 4578
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceeecCCCcEE
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC------KPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
++|++|.+.|+|.+|++.+. ++|....+++..+++||+|||+.. +|+|+|||||.+||||..|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 99999999999999999875 899999999999999999999863 68999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-C-----CccccchhhhHHHHHHHcCCCCCC-----
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-A-----SMTGDVYSFGILLLEMFSRRRPTD----- 774 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-----~~~sDvwslG~il~el~tg~~pf~----- 774 (869)
|+|||+|..+..... .......+||.+|||||++.+.. + -.+.||||+|.|+|||+++..-++
T Consensus 357 IaDFGLAl~~~p~~~------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp 430 (534)
T KOG3653|consen 357 IADFGLALRLEPGKP------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP 430 (534)
T ss_pred eeccceeEEecCCCC------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 999999998875531 23344588999999999987753 1 236799999999999998765442
Q ss_pred -------cCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 775 -------SMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 775 -------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
........++++...+..++....+. ..+ .....+..+.+.+..||+.||+.|.||
T Consensus 431 ~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p----~~W-------------~~h~~~~~l~et~EeCWDhDaeARLTA 493 (534)
T KOG3653|consen 431 EYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIP----DAW-------------RKHAGMAVLCETIEECWDHDAEARLTA 493 (534)
T ss_pred cccCchhHHhcCCCCHHHHHHHHHhhccCCCCh----hhh-------------hcCccHHHHHHHHHHHcCCchhhhhhh
Confidence 11112223333333332222211111 111 111345678899999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 002897 848 RDVVVKLCAAREAFV 862 (869)
Q Consensus 848 ~evl~~L~~~~~~~~ 862 (869)
.=|.+++..+.....
T Consensus 494 ~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 494 GCVEERMAELMMLWE 508 (534)
T ss_pred HHHHHHHHHHhccCC
Confidence 999999998876664
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=331.19 Aligned_cols=265 Identities=22% Similarity=0.332 Sum_probs=205.8
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------------chhhHHHHHHHHHHHhCCCCccce
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------------KGALKSFLTECEALRSIRHRNLIK 615 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~ 615 (869)
.+..++|++.+.||+|.||.|-+|++..+++.||||++.+.. ....+..++|+.||++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 345688999999999999999999999999999999996322 112368899999999999999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSN 695 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 695 (869)
++++..++ ..+..|+|+|||..|.+...=... ..+++.++++++++++.||+|||.+ |||||||||+|
T Consensus 173 LiEvLDDP---~s~~~YlVley~s~G~v~w~p~d~------~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsN 240 (576)
T KOG0585|consen 173 LIEVLDDP---ESDKLYLVLEYCSKGEVKWCPPDK------PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSN 240 (576)
T ss_pred EEEeecCc---ccCceEEEEEeccCCccccCCCCc------ccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence 99997765 347899999999887764332111 1289999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC----CCccccchhhhHHHHHHHcCCC
Q 002897 696 VLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE----ASMTGDVYSFGILLLEMFSRRR 771 (869)
Q Consensus 696 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~el~tg~~ 771 (869)
+|++++|++||+|||.+......... .........+||+.|+|||...++. .+.+.||||+||+||.|+.|+.
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~---~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~ 317 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDE---GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQL 317 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCcc---ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccC
Confidence 99999999999999999876443211 1112334478999999999877643 3678899999999999999999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||.+.+. .+....+....+. .+..++..+.+.+||.++|++||++|.+..+|.
T Consensus 318 PF~~~~~-----~~l~~KIvn~pL~----------------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik 370 (576)
T KOG0585|consen 318 PFFDDFE-----LELFDKIVNDPLE----------------------FPENPEINEDLKDLIKRLLEKDPEQRITLPDIK 370 (576)
T ss_pred CcccchH-----HHHHHHHhcCccc----------------------CCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence 9965321 1111112111111 111124456788999999999999999999997
Q ss_pred HHHHH
Q 002897 852 VKLCA 856 (869)
Q Consensus 852 ~~L~~ 856 (869)
...+.
T Consensus 371 ~Hpwv 375 (576)
T KOG0585|consen 371 LHPWV 375 (576)
T ss_pred eccee
Confidence 65543
No 41
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-39 Score=322.39 Aligned_cols=284 Identities=21% Similarity=0.319 Sum_probs=210.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCc-cceEEEEeeccc-cCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRN-LIKIITICSSID-FNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~~ 629 (869)
..|...++||+|.||+||+|+.+.+|+.||+|.++...+ +......+|+.+++.++|+| |+++.+++.... +....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346667789999999999999999999999999975533 45577899999999999999 999999987643 23344
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||++. +|..++....... ..++...+..+++||+.||+|||++ +|+||||||+||+|+++|.+||+||
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 78899999965 9999998876321 2377789999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+...-.. ......++|.+|+|||++.+. .|+...||||+|||++||+++++-|.+..+.+... ...+
T Consensus 165 GlAra~~ip~--------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~-~If~ 235 (323)
T KOG0594|consen 165 GLARAFSIPM--------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLF-RIFR 235 (323)
T ss_pred chHHHhcCCc--------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHH-HHHH
Confidence 9998655322 234556789999999998887 68999999999999999999999998755422111 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHH---HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECL---VAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..-......+.......+++. ......+........+ ....+++.+|++++|.+|.||+.++..
T Consensus 236 ~lGtP~e~~Wp~v~~~~~~k~-~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 236 LLGTPNEKDWPGVSSLPDYKA-PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HcCCCCccCCCCccccccccc-cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111111111111111111 1111111111111112 367899999999999999999999875
No 42
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-40 Score=353.46 Aligned_cols=260 Identities=27% Similarity=0.448 Sum_probs=217.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCC---eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENG---MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
...+.++||.|-||.||+|+.+..| ..||||.++... +....+|..|+.||.+++||||+++.|+.... ..
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks-----~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS-----KP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC-----ce
Confidence 3456789999999999999998665 579999998654 44567899999999999999999999996653 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+||+|||++|+|+.|++.+.+. +++.+...+.++||.||.||-+. ++|||||.++||||+.+..+|++|||
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEecccc
Confidence 89999999999999999998764 89999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~ 789 (869)
+++.+.++.... ..+.+-.-..+|.|||.+...+++.+|||||||+++||.++ |..||.++... +.++.
T Consensus 777 LSRvledd~~~~-----ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ-----dVIka 846 (996)
T KOG0196|consen 777 LSRVLEDDPEAA-----YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-----DVIKA 846 (996)
T ss_pred ceeecccCCCcc-----ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH-----HHHHH
Confidence 999887665111 11222223578999999999999999999999999999988 99998765433 22222
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
+ +.+.+.+.+.+||..+.+|+..||++|-.+||.+.||+..|.++.+.
T Consensus 847 I-----------------------e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 847 I-----------------------EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred H-----------------------HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 1 11233445568999999999999999999999999999999987654
No 43
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.5e-40 Score=324.41 Aligned_cols=249 Identities=23% Similarity=0.358 Sum_probs=211.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.+|++.+.||+|.||.|-+|.....|+.||||.+++. +++..-.+++|++||..++||||+.++.+ |++.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 4788899999999999999999889999999999643 45556678999999999999999999998 556689
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
..|||||..+|.|++|+.+.+. +++.+.+.+++||.+|+.|+|.+ +++|||+|.+|||+|.++++||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 9999999999999999998774 99999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
++-.+... .....++|++-|.+||+..|.+| ++.+|-||+||++|.++.|..||++. ....+++.
T Consensus 199 LSNly~~~---------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQ 264 (668)
T KOG0611|consen 199 LSNLYADK---------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQ 264 (668)
T ss_pred hhhhhccc---------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHH
Confidence 99877554 34556789999999999999988 68899999999999999999999863 22333333
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
+-.+...+.. .+....-||++|+..+|++|.|+.||....+
T Consensus 265 Is~GaYrEP~-------------------------~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 265 ISRGAYREPE-------------------------TPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred hhcccccCCC-------------------------CCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 3222222211 1223457899999999999999999987654
No 44
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-39 Score=337.88 Aligned_cols=252 Identities=20% Similarity=0.347 Sum_probs=201.6
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchh---hHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGA---LKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
...+|+|+++.||+|.+ +|+.||||+++...... .+.+.+|+.++++++||||+++++++.+. .++....++||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEE
Confidence 36899999999999999 79999999997543322 56788999999999999999999998652 22345789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++.....++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++..
T Consensus 102 Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~ 173 (283)
T PHA02988 102 EYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKIL 173 (283)
T ss_pred EeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence 9999999999998754 3889999999999999999999842 7889999999999999999999999999765
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+........
T Consensus 174 ~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i~~~ 237 (283)
T PHA02988 174 SSPP-----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLIINK 237 (283)
T ss_pred cccc-----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhc
Confidence 3321 12357899999999876 6789999999999999999999999975321 1111111100
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
... ...+..++..+.+++.+||+.||++|||++|+++.|+....
T Consensus 238 ~~~----------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 238 NNS----------------------LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCC----------------------CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 000 00011345678899999999999999999999999987653
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=340.87 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=213.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|...+++|+|+||.++.++++.+++.||+|.+.... ....+...+|+.+++++.|||||.+.+.|... ....
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~----~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED----GQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC----CceE
Confidence 57889999999999999999999999999999996433 33345789999999999999999999986543 3449
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
+|||+||+||++.+.+.+.++. .++++.+..|+.|++.|+.|||+. +|+|||||+.|||++.++.|||+|||+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~----~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGV----LFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 9999999999999999987732 489999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
|+.+.... ......+||+.||.||.+.+.+|+.|+||||+||++|||++-+++|..... ...+....
T Consensus 153 aK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki~ 219 (426)
T KOG0589|consen 153 AKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKIN 219 (426)
T ss_pred hhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHHh
Confidence 99887653 245567899999999999999999999999999999999999999975322 22222222
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
+... .+.+..+..++..++..|++.+|+.||++.|++.+
T Consensus 220 ~~~~-----------------------~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 220 RGLY-----------------------SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred hccC-----------------------CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1110 11222456678899999999999999999999987
No 46
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=370.57 Aligned_cols=268 Identities=28% Similarity=0.440 Sum_probs=216.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCC-----eEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENG-----MLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..+..+.||+|+||.||.|...... ..||||.++.. +.+....|.+|+.+|++++|||||+++|+|.+.
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~----- 767 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS----- 767 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC-----
Confidence 4456789999999999999986332 34899988654 456678999999999999999999999998763
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKL-EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...+|++|||++|+|..|+++.+... ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+
T Consensus 768 ~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 768 GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 67899999999999999999874432 234589999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||+|+.+....... ......-...|||||.+..+.++.|+|||||||++||++| |..||...... +.
T Consensus 845 DFGlArDiy~~~yyr------~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-----~v 913 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYR------KHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-----EV 913 (1025)
T ss_pred ccchhHhhhhchhee------ccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH-----HH
Confidence 999999544332111 1111123568999999999999999999999999999999 89998753222 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
...+. .+++.+.+..|+..++++|..||+.+|++||++..+++++..+..+....
T Consensus 914 ~~~~~-----------------------~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 914 LLDVL-----------------------EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred HHHHH-----------------------hCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 11111 12344455678999999999999999999999999999999887765443
No 47
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.4e-39 Score=349.71 Aligned_cols=282 Identities=20% Similarity=0.259 Sum_probs=203.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.++||+|+||.||+|++..+|+.||||++... .......+.+|++++++++||||+++++++......+....+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999999999999999998642 223345688999999999999999999988655444445689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ ++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 69999987654 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||...... .........
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~ 223 (338)
T cd07859 151 RVAFNDTPT-----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDL 223 (338)
T ss_pred cccccccCc-----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHH
Confidence 765332210 012234568999999999865 57899999999999999999999999653211 100111000
Q ss_pred cccc----cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEK----VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~----~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... ...+...........................+..+.+++.+||+.||++|||++|+++.
T Consensus 224 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 224 LGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 00000000000000000000000000111234567899999999999999999999864
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.8e-38 Score=336.07 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=199.6
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
|+..+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|+.++++++|++|+++++++.+ .+..+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~-----~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc-----CCeEE
Confidence 677899999999999999998899999999986432 2233467889999999999999999998654 36799
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999988865432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 150 ~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~- 218 (285)
T cd05631 150 VQIPEGE---------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVDRRVK- 218 (285)
T ss_pred EEcCCCC---------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHHHHhh-
Confidence 7654321 1223468999999999999999999999999999999999999997532211 1111111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
... .......+..+.+++.+||+.||++||+ ++|+++
T Consensus 219 ~~~-----------------------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 219 EDQ-----------------------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred ccc-----------------------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 000 0011123456789999999999999997 788876
No 49
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-39 Score=303.76 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=212.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+.++|++.+.||+|.||.||.|+.++++..||+|++.+.. .+...++.+|++|-..++||||+++++++.+ .
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd-----~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD-----S 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec-----c
Confidence 4578999999999999999999999999999999996432 3345788999999999999999999999655 4
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...|+++||..+|++...+...+.. .+++.....++.|+|.|+.|+|.+ +|+||||||+|+|++.++..||+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 8899999999999999999965532 488888999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+...+. ......+||..|.|||...+..++..+|+|++|+..||++.|.+||.... .+..+.+..+
T Consensus 168 fGwsV~~p~----------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k 236 (281)
T KOG0580|consen 168 FGWSVHAPS----------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRK 236 (281)
T ss_pred CCceeecCC----------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHH
Confidence 999975432 34456789999999999999999999999999999999999999998654 3333333322
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.. ..+| ...+....++|.+|+..+|.+|.+..||++.-
T Consensus 237 ~~-------~~~p---------------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 237 VD-------LKFP---------------------STISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred cc-------ccCC---------------------cccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 21 1111 13345677999999999999999999998753
No 50
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.9e-39 Score=344.37 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=196.1
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc-----CCEEEEEEe
Confidence 47999999999999999999999999997432 3344667899999999999999999998654 378999999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999998654 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~~- 212 (323)
T cd05571 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEEI- 212 (323)
T ss_pred cCC--------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCCC-
Confidence 211 222345699999999999999999999999999999999999999964211 111111111000
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
..+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 213 -----------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 213 -----------------------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -----------------------CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00112345678999999999999999 7888875
No 51
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.7e-38 Score=340.76 Aligned_cols=200 Identities=24% Similarity=0.377 Sum_probs=176.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+|..||+|++.... ......+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CEE
Confidence 468999999999999999999999999999999997543 33456789999999999999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 99999999999999998754 3889999999999999999999862 699999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
+...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccccccc----------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8755332 12234689999999999998999999999999999999999999964
No 52
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=339.91 Aligned_cols=263 Identities=26% Similarity=0.402 Sum_probs=211.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCe---E-EEEEEeec---ccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGM---L-VAVKVLNL---MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.++....++||+|+||.||+|+.+..+. . ||||..+. .......++.+|+++|+.++|||||+++|++...
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~-- 233 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE-- 233 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--
Confidence 3455566999999999999999874322 3 89999874 3466778999999999999999999999998764
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
...++|||+|.||+|.+|+++.... ++..++..++.++|.||+|||++ +++||||.++|+|++.++.+|
T Consensus 234 ---~Pl~ivmEl~~gGsL~~~L~k~~~~-----v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 234 ---EPLMLVMELCNGGSLDDYLKKNKKS-----LPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred ---CccEEEEEecCCCcHHHHHHhCCCC-----CCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEE
Confidence 7799999999999999999998753 89999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLH 784 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~ 784 (869)
|+|||+++.-.... .......-...|+|||.+..+.|++++|||||||++||+++ |..||.+....
T Consensus 303 ISDFGLs~~~~~~~--------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~----- 369 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYV--------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY----- 369 (474)
T ss_pred eCccccccCCccee--------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-----
Confidence 99999987543111 01111134689999999999999999999999999999999 88898753222
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
+....+.... .....+...+..+..++.+||..+|++||||.++.+.++.+......
T Consensus 370 ~v~~kI~~~~----------------------~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 370 EVKAKIVKNG----------------------YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHHHhcC----------------------ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 2222221111 01111124566788899999999999999999999999998877654
No 53
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4e-38 Score=336.73 Aligned_cols=274 Identities=20% Similarity=0.298 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++++.+ ....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT-----KETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec-----CCeE
Confidence 4689999999999999999999998999999999864332 233567889999999999999999998654 3789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999995 688888876543 388999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+....... .......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||.................
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 150 ARAKSVPS--------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred ceeccCCC--------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 87543221 12233468999999998765 4578899999999999999999999975432211111111110
Q ss_pred cccc---ccc-----ccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEK---VME-----IVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~---~~~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ... ..++........ ............+..+.+++.+|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFTLYSP----KNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCCChhhccchhhccccccccccccCC----ccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 000 000000000000 000000000012345779999999999999999999986
No 54
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.7e-39 Score=340.24 Aligned_cols=246 Identities=24% Similarity=0.308 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 47899999999999999999999899999999986432 2234568899999999999999999987543 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 999999999999999998754 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||..... .......
T Consensus 147 ~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i 210 (291)
T cd05612 147 FAKKLRDR-----------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKI 210 (291)
T ss_pred cchhccCC-----------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 99765322 1234689999999999988899999999999999999999999965321 1111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 853 (869)
..... ..+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 211 ~~~~~------------------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 211 LAGKL------------------------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HhCCc------------------------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 11000 000112345779999999999999995 8888754
No 55
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.4e-38 Score=337.60 Aligned_cols=268 Identities=22% Similarity=0.373 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC----------------CCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE----------------NGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIK 615 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 615 (869)
.++|++.++||+|+||.||+|.+.. ++..||+|++.... ......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999998632 34579999986543 334567899999999999999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcc-------------cccCCCHHHHHHHHHHHHHHHHHHHhcC
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL-------------EVCNLSLIQTLNIAIDVASAIEYLHHHC 682 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~ 682 (869)
+++++.+. +..++||||+++|+|.+++....... ....+++..+.+++.||+.||+|||+.
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 99997653 66899999999999999986543110 112478899999999999999999999
Q ss_pred CCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHH
Q 002897 683 KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGIL 762 (869)
Q Consensus 683 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~i 762 (869)
+|+||||||+||+++.++.+||+|||.++........ .......++..|+|||++.++.++.++|||||||+
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 229 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY------RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT 229 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCcee------EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence 9999999999999999999999999999765433210 11223446788999999988899999999999999
Q ss_pred HHHHHc--CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCC
Q 002897 763 LLEMFS--RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMES 840 (869)
Q Consensus 763 l~el~t--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 840 (869)
+|||++ +..||...... .................. ...+..++..+.+++.+||+.|
T Consensus 230 l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~cl~~~ 288 (304)
T cd05096 230 LWEILMLCKEQPYGELTDE--QVIENAGEFFRDQGRQVY-------------------LFRPPPCPQGLYELMLQCWSRD 288 (304)
T ss_pred HHHHHHccCCCCCCcCCHH--HHHHHHHHHhhhcccccc-------------------ccCCCCCCHHHHHHHHHHccCC
Confidence 999987 55677643211 111111111000000000 0001134567889999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 002897 841 PTDRMQMRDVVVKLC 855 (869)
Q Consensus 841 P~~RPs~~evl~~L~ 855 (869)
|++|||+.||.+.|+
T Consensus 289 p~~RPs~~~i~~~l~ 303 (304)
T cd05096 289 CRERPSFSDIHAFLT 303 (304)
T ss_pred chhCcCHHHHHHHHh
Confidence 999999999988875
No 56
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.7e-38 Score=342.53 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=203.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++.. .+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 46899999999999999999999899999999997432 2344678899999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 999999999999999997654 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .........
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 214 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENLKYWK 214 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHHHhcc
Confidence 9975432 1234568999999999999899999999999999999999999997532211 011110000
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .+.. .......+.++.+++.+|++.+|++||+++|+++.
T Consensus 215 --~~~~---~~~~---------------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 215 --ETLQ---RPVY---------------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --cccc---CCCC---------------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0000 0000 00001335567899999999999999999999864
No 57
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.5e-38 Score=347.08 Aligned_cols=264 Identities=23% Similarity=0.363 Sum_probs=204.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|++.++||+|+||.||+|++ ..++..||||+++... ....+.+.+|+.+++.+ +||||++++++|...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 45799999999999999999974 3456789999986432 33446788999999999 899999999997553
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc---------------------------------------------------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL--------------------------------------------------- 654 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 654 (869)
...++||||+++|+|.++++......
T Consensus 112 ---~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 112 ---GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ---CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 67899999999999999997643110
Q ss_pred ------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 655 ------------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 655 ------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
+...+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 112478999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
..... .......++..|+|||++.+..++.++|||||||++|||++ |..||........ .........
T Consensus 266 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~~~~~---- 334 (375)
T cd05104 266 NDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMIKEGY---- 334 (375)
T ss_pred Ccccc------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHHHhCc----
Confidence 33210 11122335678999999999999999999999999999998 8889865322211 111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
. ...+...+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 335 ~----------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 R----------------------MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred c----------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 000011235688999999999999999999999999863
No 58
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2.6e-38 Score=335.31 Aligned_cols=275 Identities=20% Similarity=0.294 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT-----ERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC-----CCeEE
Confidence 57999999999999999999999899999999986433 2234567899999999999999999998654 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++ +|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 99999975 99999876543 378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh-
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV- 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~- 790 (869)
+...... .......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ......+..
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 221 (288)
T cd07871 151 RAKSVPT--------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLG 221 (288)
T ss_pred eeccCCC--------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 7543221 12233467999999998865 468999999999999999999999997532211 111111110
Q ss_pred --cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 --LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 --~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+..+....+..-............ ...........+..+++.+|+++||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQ-PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCC-chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000111111000000000000000 000000122356789999999999999999999975
No 59
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.5e-38 Score=333.28 Aligned_cols=275 Identities=21% Similarity=0.344 Sum_probs=201.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECC-CCeEEEEEEeeccc--chhhHHHHHHHHHHHhC---CCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGE-NGMLVAVKVLNLMQ--KGALKSFLTECEALRSI---RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 627 (869)
.+|++.+.||+|+||.||+|++.. +++.||+|+++... ......+.+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 379999999999999999999853 57889999986432 22334566788777766 6999999999986544445
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 567899999996 599999876542 2489999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.++..... .......|+..|+|||++.+..++.++|||||||++|||++|++||......+ ......
T Consensus 153 Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~ 222 (290)
T cd07862 153 DFGLARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKIL 222 (290)
T ss_pred cccceEeccCC---------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHH
Confidence 99999765432 12234568999999999988889999999999999999999999997532211 111111
Q ss_pred hhhc---ccccccccCccchhhhhhcccccCCCc--cchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVL---PEKVMEIVDPSLLLEVRANNSMSRGGE--RVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... +....... ..... ........ .....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 223 DVIGLPGEEDWPRDV--ALPRQ----AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHhCCCChhhchhhh--cccch----hccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1110 00000000 00000 00000000 0001124456789999999999999999999985
No 60
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.8e-38 Score=335.55 Aligned_cols=278 Identities=20% Similarity=0.254 Sum_probs=201.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++.. .+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 47899999999999999999999899999999986432 2334677899999999999999999988654 3788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++++.+..+..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPN------GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 99999999877765543322 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch--HHHhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT--LHEFSKM 789 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~--~~~~~~~ 789 (869)
+........ .......|++.|+|||++.+..++.++||||+||++|||++|+.||......... .......
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07848 147 ARNLSEGSN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP 219 (287)
T ss_pred ccccccccc-------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence 987643221 1223356899999999999888999999999999999999999999753221110 0000000
Q ss_pred hcccccccc-cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEI-VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... .++........................+..+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 000000000000000000000111124567899999999999999999999875
No 61
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.7e-38 Score=346.45 Aligned_cols=265 Identities=22% Similarity=0.359 Sum_probs=204.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||.||+|++.. ++..||+|+++... ......+.+|+++++.+ +|+||++++++|...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 3579999999999999999998643 34579999996432 33456788999999999 899999999987653
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCc----------------------------------------------------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDK---------------------------------------------------- 653 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 653 (869)
...++||||+++|+|.+++......
T Consensus 115 ---~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 115 ---GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred ---CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 6789999999999999998653210
Q ss_pred ------------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCC
Q 002897 654 ------------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLD 721 (869)
Q Consensus 654 ------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 721 (869)
....++++.++++++.||++||+|||++ +|+||||||+||++++++.+||+|||+++........
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce
Confidence 0112478899999999999999999999 9999999999999999999999999999765432210
Q ss_pred CccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccccccC
Q 002897 722 TVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVD 800 (869)
Q Consensus 722 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 800 (869)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .......... ....
T Consensus 269 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~-----~~~~ 336 (374)
T cd05106 269 ------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY-----QMSR 336 (374)
T ss_pred ------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc-----CccC
Confidence 11122335678999999988899999999999999999997 999997532221 1111111000 0000
Q ss_pred ccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 801 PSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
+...+.++.+++.+||+.||++|||+.||++.|+++.
T Consensus 337 ---------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 337 ---------------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ---------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0012456789999999999999999999999998864
No 62
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=309.04 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=204.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec--ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL--MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++.|++.+.||+|.|+.||++.+..+|+.+|+|++.. -.....+.+.+|+.|.+.++||||+++.+.+. ...
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-----~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-----ccc
Confidence 35678888999999999999999999999999999852 23345688899999999999999999998754 347
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 706 (869)
..|+|+|+|+|++|..-+-.+. -.++..+-..++||++||.|+|.+ +|||||+||+|+++... --+||
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred eeEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceee
Confidence 8999999999999976554432 278889999999999999999999 99999999999999543 36999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+|..+... ....+++|||+|||||++...+|+..+|||+.|||+|-++.|.+||.+.... ..++..
T Consensus 155 ~~FGvAi~l~~g---------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye~I 224 (355)
T KOG0033|consen 155 ADFGLAIEVNDG---------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYEQI 224 (355)
T ss_pred cccceEEEeCCc---------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHHHH
Confidence 999999987632 3455678999999999999999999999999999999999999999753221 122222
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....+ ++ ++ +......++..+|+++|+..||++|.|+.|.+..
T Consensus 225 ~~g~y-----d~-~~------------------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 225 KAGAY-----DY-PS------------------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred hcccc-----CC-CC------------------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 21111 11 11 1112334556799999999999999999998763
No 63
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=313.87 Aligned_cols=274 Identities=25% Similarity=0.400 Sum_probs=224.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC--CCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI--RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 629 (869)
...+.+..+.||+|.||.||+|.+ .|+.||||++...++ +...+|.+|++.+ +|+||+.+++.-... -..-.
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~T 282 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWT 282 (513)
T ss_pred hhheeEEEEEecCccccceeeccc--cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccC-CCceE
Confidence 445677889999999999999999 799999999965433 6678899998865 999999999874332 12234
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCceeecCCCcE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHH-----CKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
..++|++|.+.|||+||+.+.. ++.+..++++..+|.||+|||-. ++|.|+|||||..||||..++.+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 6799999999999999999854 89999999999999999999975 58999999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC------CCccccchhhhHHHHHHHcC---------
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE------ASMTGDVYSFGILLLEMFSR--------- 769 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~el~tg--------- 769 (869)
-|+|+|+|......... ........+||.+|||||++...- .-..+||||||.|+||++.+
T Consensus 356 ~IADLGLAv~h~~~t~~----idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDT----IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred EEeeceeeEEecccCCc----ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 99999999887665321 123456678999999999986542 23458999999999999763
Q ss_pred -CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 770 -RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 770 -~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
+.||.+....+.+++++.+.+.-++....++. ++...++...+.++++.||..+|..|-||-
T Consensus 432 y~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipn-----------------rW~s~~~l~~m~klMkeCW~~Np~aRltAL 494 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPN-----------------RWKSDPALRVMAKLMKECWYANPAARLTAL 494 (513)
T ss_pred hcCCcccCCCCCCCHHHHhcceeecccCCCCCc-----------------ccccCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence 47888877778888887777665555444443 344557888999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002897 849 DVVVKLCAARE 859 (869)
Q Consensus 849 evl~~L~~~~~ 859 (869)
.+-+.|.++.+
T Consensus 495 riKKtl~~l~~ 505 (513)
T KOG2052|consen 495 RIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHHhc
Confidence 99999888765
No 64
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=342.81 Aligned_cols=246 Identities=23% Similarity=0.284 Sum_probs=200.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.. .+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD-----EN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-----CC
Confidence 357899999999999999999999899999999996432 2334678899999999999999999998654 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 8999999999999999998754 378999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|++....... ....|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ......
T Consensus 163 g~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~ 226 (329)
T PTZ00263 163 GFAKKVPDRT-----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYEK 226 (329)
T ss_pred cCceEcCCCc-----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHHH
Confidence 9998654321 234689999999999998999999999999999999999999964211 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
....... .+......+.+++.+||+.||++||+ ++|++.
T Consensus 227 i~~~~~~------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 227 ILAGRLK------------------------FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HhcCCcC------------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1111000 00012345779999999999999997 677764
No 65
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.7e-38 Score=339.32 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=195.2
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|+++++.++||||+++++++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-----~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-----HDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCEEEEEEe
Confidence 4799999999999999989999999999743 23344567889999999999999999998654 378999999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|..++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999987654 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~- 212 (323)
T cd05595 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELILMEEI- 212 (323)
T ss_pred CCC--------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCC-
Confidence 211 1123356899999999999989999999999999999999999999643211 11111110000
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
. .+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 213 -----~------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 213 -----R------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -----C------------------CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0 0012345678999999999999998 8888875
No 66
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.3e-38 Score=337.54 Aligned_cols=201 Identities=25% Similarity=0.394 Sum_probs=175.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.++||+|+||.||+|.+..++..+|+|+++.. .......+.+|+++++.++||||+++++++... +..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CEE
Confidence 46899999999999999999999989999999998754 233456789999999999999999999997653 689
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 99999999999999997654 3789999999999999999999742 799999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+....... .....|+..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 151 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred chhhhhhc----------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 87553321 12346899999999999888999999999999999999999999753
No 67
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-39 Score=303.02 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=207.4
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhC-CCCccceEEEEe
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSI-RHRNLIKIITIC 620 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 620 (869)
......|...+.+|+|..++|-++.++.+|..+|+|++.... ....+.-..|+.||+++ .||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 344567888999999999999999999999999999996322 12235568899999999 699999999996
Q ss_pred eccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 002897 621 SSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH 700 (869)
Q Consensus 621 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 700 (869)
.. +...++|+|.|+.|.|.+|+...- .++++..++|++|+.+|++|||.+ .|||||+||+|||+++
T Consensus 93 es-----~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 ES-----DAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred cC-----cchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 54 478999999999999999998765 499999999999999999999999 9999999999999999
Q ss_pred CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC------CCCCCccccchhhhHHHHHHHcCCCCCC
Q 002897 701 DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT------GSEASMTGDVYSFGILLLEMFSRRRPTD 774 (869)
Q Consensus 701 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~el~tg~~pf~ 774 (869)
+.++||+|||+|+.+.++ ......+||++|.|||.+. ...|+..+|+||+|||+|.++.|.+||.
T Consensus 159 n~~i~isDFGFa~~l~~G---------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPG---------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred ccceEEeccceeeccCCc---------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 999999999999987665 3345578999999999764 2358889999999999999999999985
Q ss_pred cCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 775 SMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. +..... .+.+..+ ..+. ..+...+......+||.+|++.||.+|.|++|+++.
T Consensus 230 H--RkQmlM---LR~ImeG-kyqF-------------------~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 230 H--RKQMLM---LRMIMEG-KYQF-------------------RSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred H--HHHHHH---HHHHHhc-cccc-------------------CCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 3 111111 1111111 1111 122334566778899999999999999999999873
No 68
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.9e-38 Score=338.93 Aligned_cols=243 Identities=24% Similarity=0.344 Sum_probs=196.3
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.+++.++||||+++.+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQT-----KDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCEEEEEEe
Confidence 4799999999999999999999999999643 23345678899999999999999999988654 378999999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999987654 389999999999999999999999 99999999999999999999999999987532
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ............
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~~- 212 (328)
T cd05593 147 TDA--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEDI- 212 (328)
T ss_pred Ccc--------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCCc-
Confidence 211 122335689999999999988999999999999999999999999964221 111111111000
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVK 853 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 853 (869)
. .+...+..+.+++.+||+.||++|| ++.|+++.
T Consensus 213 -----~------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 213 -----K------------------FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -----c------------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0 0012345677999999999999997 89998864
No 69
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.1e-37 Score=326.82 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..+|++.+.||+|+||.||+|.+. ..+..||+|.++... ......+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR-----G 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec-----C
Confidence 356889999999999999999874 356789999987543 2334678899999999999999999998754 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 678999999999999999986543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.+........ .......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ...
T Consensus 151 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~~ 218 (266)
T cd05064 151 FRRLQEDKSEAI-------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DVI 218 (266)
T ss_pred Ccccccccccch-------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHH
Confidence 998764322110 11112335678999999999999999999999999999775 99998653211 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...... . ..+.+..++..+.+++.+||+.+|++|||++|+.+.|.++
T Consensus 219 ~~~~~~-~----------------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 219 KAVEDG-F----------------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHCC-C----------------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 111000 0 0011123556788999999999999999999999998764
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.2e-38 Score=338.46 Aligned_cols=240 Identities=23% Similarity=0.323 Sum_probs=193.4
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++.. .+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS-----PEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEec-----CCeEEEEEcCC
Confidence 69999999999999989999999998643 23345677899999999999999999998654 37889999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999997654 389999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+..........
T Consensus 147 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~~--- 210 (312)
T cd05585 147 D--------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEPL--- 210 (312)
T ss_pred C--------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCC---
Confidence 1 12234568999999999999899999999999999999999999996421 1122111111100
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ---MRDVVV 852 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 852 (869)
..+...+..+.+++.+||+.||++||+ +.|++.
T Consensus 211 ---------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 211 ---------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred ---------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 001123456789999999999999985 566654
No 71
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-37 Score=342.52 Aligned_cols=271 Identities=22% Similarity=0.235 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++++... ...++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYN-----KFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC-----CeeEE
Confidence 57999999999999999999999999999999753 24567899999999999999999987543 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|+|++. ++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 161 v~e~~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EEecCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 999995 68999887654 388999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccC------CchHHHhh
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHE------GLTLHEFS 787 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~------~~~~~~~~ 787 (869)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+....
T Consensus 231 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~ 303 (391)
T PHA03212 231 FPVDINA-------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII 303 (391)
T ss_pred ccccccc-------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH
Confidence 5332110 1223457999999999999989999999999999999999999886432111 01111111
Q ss_pred hhhc--ccccccccCccchhhh--hhcccccCCCccc---hHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVL--PEKVMEIVDPSLLLEV--RANNSMSRGGERV---KIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~--~~~~~~~~d~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...- +..........+...+ ...........++ ...+.+.++.+++.+||+.||++||||+|+++
T Consensus 304 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 304 RRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 1110 0000000000000000 0000000111111 12245668899999999999999999999986
No 72
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3e-37 Score=327.55 Aligned_cols=269 Identities=24% Similarity=0.420 Sum_probs=211.4
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|.+.+.||+|+||.||+|... .++..+|+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 56889999999999999999852 35677999998766555667899999999999999999999997643
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCc-------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDK-------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
+..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 6789999999999999999754321 1122489999999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~ 780 (869)
+.++|+|||.+........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~- 229 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN- 229 (288)
T ss_pred CcEEeccCCccccccCCce------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999976543211 011223345788999999998889999999999999999998 89998643221
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
............. ....++..+.+++.+||+.||.+|||+.||.+.|+++.+.
T Consensus 230 ----~~~~~i~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 230 ----EVIECITQGRVLQ-----------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ----HHHHHHHcCCcCC-----------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 1111111110000 0012334688999999999999999999999999999877
Q ss_pred hhcc
Q 002897 861 FVSM 864 (869)
Q Consensus 861 ~~~~ 864 (869)
....
T Consensus 283 ~~~~ 286 (288)
T cd05093 283 SPVY 286 (288)
T ss_pred cccc
Confidence 5443
No 73
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=335.20 Aligned_cols=245 Identities=23% Similarity=0.353 Sum_probs=205.1
Q ss_pred eeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccC
Q 002897 561 MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQN 640 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 640 (869)
+||+|.||+||.|++..+...+|||.+...+.....-+..|+...+.++|.|||+++|.+... ++.-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen-----Gf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN-----GFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC-----CeEEEEeecCCC
Confidence 799999999999999999999999999877766777889999999999999999999986543 688899999999
Q ss_pred CCHHHHHhhCCCcccccCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCCcEEEccccccccCCC
Q 002897 641 GSLEEWLHQNNDKLEVCNL--SLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 641 gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~ 717 (869)
|+|.+.++..-+. + .+.++-.+.+||++||.|||+. .|||||||-+||||+ -.|.+||+|||.++.+..
T Consensus 657 GSLSsLLrskWGP-----lKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGP-----LKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CcHHHHHHhccCC-----CccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 9999999876543 5 7788889999999999999999 999999999999995 578999999999987654
Q ss_pred CCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 718 RPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 718 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
-. ..+..+.||..|||||++..++ |+.++|||||||++.||.||++||-......... .+.- +
T Consensus 729 in--------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---FkVG----m 793 (1226)
T KOG4279|consen 729 IN--------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FKVG----M 793 (1226)
T ss_pred CC--------ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hhhc----c
Confidence 32 4556778999999999998775 8999999999999999999999996543321111 0000 0
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .-++.+++...+...+|.+|+.+||.+||+|.++++
T Consensus 794 yK-------------------vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 794 YK-------------------VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ee-------------------cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 00 112344567788889999999999999999999986
No 74
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.5e-37 Score=324.64 Aligned_cols=262 Identities=21% Similarity=0.336 Sum_probs=208.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+++.||||.+... .......+.+|+++++.++||||+++++++... +.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 5799999999999999999999989999999987532 233446788999999999999999999987643 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++|+||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988643221 12478999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+....... .......|+..|+|||.+.+..++.++||||+|+++|||++|+.||...... ...+....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~ 220 (267)
T cd08228 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKI 220 (267)
T ss_pred cceeccchh--------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHH
Confidence 988664332 1112345888999999998888999999999999999999999998643221 11111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
.... . ........+..+.+++.+||+.+|++||+++||++.+++++
T Consensus 221 ~~~~-----~-----------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 221 EQCD-----Y-----------------PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred hcCC-----C-----------------CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0000 0 00111234567889999999999999999999999998764
No 75
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=339.97 Aligned_cols=249 Identities=25% Similarity=0.370 Sum_probs=193.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|+..++||+|+||.||+|++..+|+.||||++.... ....+.+.+|+++++.++|+||+++++++.. ....+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCeEE
Confidence 45777899999999999999999899999999986443 2334678999999999999999999998654 37789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986432 256778889999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
+...... .......||..|+|||++.. ...+.++|||||||++|||++|+.||...... ......
T Consensus 216 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~ 285 (353)
T PLN00034 216 RILAQTM--------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLM 285 (353)
T ss_pred eeccccc--------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHH
Confidence 8654321 11233568999999998743 23456899999999999999999999732211 111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... .......++.++.+++.+||+.||++|||+.|+++.
T Consensus 286 ~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 286 CAICMSQ-----------------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHhccC-----------------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1110000 000111344568899999999999999999999874
No 76
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.6e-38 Score=339.17 Aligned_cols=247 Identities=22% Similarity=0.281 Sum_probs=199.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC-eEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG-MLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----- 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-----
Confidence 457999999999999999999876444 78999998643 233456788999999999999999999997553
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 78999999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 175 FG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~ 238 (340)
T PTZ00426 175 FGFAKVVDTR-----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQ 238 (340)
T ss_pred CCCCeecCCC-----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHH
Confidence 9999765322 12346899999999999888999999999999999999999999753211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 853 (869)
....... .. +...+..+.+++.+|++.||++|+ +++|+++.
T Consensus 239 ~i~~~~~--~~----------------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 239 KILEGII--YF----------------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHhcCCC--CC----------------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1111000 00 011234567999999999999995 88888763
No 77
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=328.76 Aligned_cols=257 Identities=25% Similarity=0.423 Sum_probs=215.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCC----CeEEEEEEeec-ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGEN----GMLVAVKVLNL-MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+..+..++||.|-||.||+|....- .-.||||..+. ...+..+.|..|+.+|+.++||||++++|+|.+
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------ 462 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------ 462 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------
Confidence 3445567999999999999998522 23588998875 344557889999999999999999999999976
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...|||||.++.|.|..|++.+... ++......++.||+.||+|||+. ++|||||..+||||.....+||+|
T Consensus 463 ~P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 463 QPMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred cceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecc
Confidence 5689999999999999999988764 89999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||+++.+.+... ...+...-...|||||.+.-..++.++|||.|||++||++. |..||.+....+..
T Consensus 535 FGLSR~~ed~~y-------YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI----- 602 (974)
T KOG4257|consen 535 FGLSRYLEDDAY-------YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI----- 602 (974)
T ss_pred cchhhhccccch-------hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-----
Confidence 999998876542 22223334678999999999999999999999999999987 99999864333111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
+ ..+.+.+.+.++.||+.++.++.+||.+||.+||++.|+...|..+.+
T Consensus 603 -----------------~------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 -----------------G------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred -----------------E------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 0 011233445567899999999999999999999999999999999876
No 78
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=337.56 Aligned_cols=245 Identities=24% Similarity=0.327 Sum_probs=203.5
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
...++|...++||+|+||.|++|..+.+++.+|||++++. ..++.+....|.+|+... +||.+++++.. |+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----cc
Confidence 3457899999999999999999999999999999999754 456778889999998887 59999999998 45
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
..++.++||||+.||++..+.+.. .+++..++-++..|+.||.|||++ |||+||||.+|||+|.+|++||
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~~~~-------~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHIHTD-------VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEEecc-------cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEe
Confidence 569999999999999955544433 289999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+++.--. ....+++.+||+.|||||++.+..|+.++|-|||||++|||+.|+.||.+..+++ .++.+
T Consensus 510 ADFGlcKe~m~--------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee-~FdsI 580 (694)
T KOG0694|consen 510 ADFGLCKEGMG--------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE-VFDSI 580 (694)
T ss_pred cccccccccCC--------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHH
Confidence 99999974321 2245677899999999999999999999999999999999999999998643321 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
. .+ +..++..++.+...++++++..+|++|.-+
T Consensus 581 ~----~d------------------------~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 581 V----ND------------------------EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred h----cC------------------------CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1 00 111222455677899999999999999865
No 79
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.9e-37 Score=328.67 Aligned_cols=276 Identities=27% Similarity=0.417 Sum_probs=207.9
Q ss_pred cCCCCCCeeeeecceEEEEEEE----CCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGII----GENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.+|++.+.||+|+||.||+|.. ..+++.||+|.+........+.+.+|+++++.++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence 4788999999999999999984 357889999999766666667889999999999999999999987542 335
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 68999999999999999976543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|++.......... .......++..|+|||+..+..++.++|||||||++|||++|..|+...... +...
T Consensus 153 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~ 221 (284)
T cd05081 153 GLTKVLPQDKEYY-----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE------FMRM 221 (284)
T ss_pred cccccccCCCcce-----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh------hhhh
Confidence 9998765432110 0111123455699999998888999999999999999999998776432111 1110
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.............+...... ....+....++..+.+++.+||+.+|++||||.||++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 222 MGNDKQGQMIVYHLIELLKN------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccccccccchHHHHHHHhc------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000011111110000 011111223456788999999999999999999999999876
No 80
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.9e-37 Score=333.52 Aligned_cols=260 Identities=25% Similarity=0.413 Sum_probs=205.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|+..+.||+|+||.||+|++..++. .||+|+++... ....+++.+|+.+++.++||||++++++|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 579999999999999999999865555 48999986433 3445678899999999999999999999764
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++|+||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 346799999999999999987643 388999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||+..... ......
T Consensus 153 fG~a~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~ 224 (316)
T cd05108 153 FGLAKLLGADEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSIL 224 (316)
T ss_pred ccccccccCCCcc------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 9999876543211 11122234678999999999899999999999999999998 99998653211 111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
... .. .+.+..++..+.+++.+||+.+|++|||+.|++..+.++.+..
T Consensus 225 ~~~----~~----------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 225 EKG----ER----------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred hCC----CC----------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 100 00 0001123346789999999999999999999999998886543
No 81
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.1e-37 Score=326.86 Aligned_cols=261 Identities=26% Similarity=0.454 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCC-----eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENG-----MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
++|++.+.||+|+||.||+|.....+ ..||+|.+.... ......+.+|+++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE---- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC----
Confidence 47889999999999999999986444 689999986433 23446789999999999999999999987543
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLE----------VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
...+++|||+++|+|.+++.......+ ...+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 81 -QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred -CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 678999999999999999986532111 13488999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
+++++.++|+|||++........ ........+++.|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADY------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF 230 (283)
T ss_pred EcCCCcEEECCCcceeecccccc------ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999976533221 012233456789999999988899999999999999999998 99998753
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
... +.......... ...+..++.++.+++.+||+.||++||++.||++.|++
T Consensus 231 ~~~-----~~~~~i~~~~~-----------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 231 SNQ-----EVIEMIRSRQL-----------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CHH-----HHHHHHHcCCc-----------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 221 11111111000 01122456788999999999999999999999999975
No 82
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.3e-37 Score=336.58 Aligned_cols=267 Identities=24% Similarity=0.349 Sum_probs=206.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||.||+|... .+++.||+|+++... ....+.+.+|+++++++ +|+||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 457999999999999999999753 245789999986432 23346678899999999 899999999987543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc---------------------------------------------------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL--------------------------------------------------- 654 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 654 (869)
....+++|||+++|+|.+++.......
T Consensus 84 --~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 84 --GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred --CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 357889999999999999986532110
Q ss_pred ----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCC
Q 002897 655 ----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSS 730 (869)
Q Consensus 655 ----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 730 (869)
...++++..+.+++.||+.||+|||+. +|+||||||+||+++.++.++|+|||++..+...... ...
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------~~~ 232 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VRK 232 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------hhc
Confidence 012589999999999999999999999 9999999999999999999999999999876433210 112
Q ss_pred CCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhh
Q 002897 731 SGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRA 809 (869)
Q Consensus 731 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 809 (869)
....++..|+|||++.+..++.++|||||||++|||++ |..||......+ ....... .....
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~----~~~~~------------ 295 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLK----EGTRM------------ 295 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHh----ccCCC------------
Confidence 23446778999999999999999999999999999998 999986432111 1111100 00000
Q ss_pred cccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 810 NNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
..+......+.+++.+||+.+|++||++.|+++.|+++.+
T Consensus 296 ----------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 ----------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ----------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011234568899999999999999999999999998865
No 83
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.8e-37 Score=340.74 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++.+ .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQD-----ENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc-----CCe
Confidence 47899999999999999999999999999999997532 3344667899999999999999999998664 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 999999999999999998654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcccc------------------------------CCCCCCccCcccccCCcccCCCCCCccccchhhh
Q 002897 711 LAKFLPARPLDTVVET------------------------------PSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFG 760 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG 760 (869)
++..+........... .......+||+.|+|||++.+..++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 9876533211000000 0011134699999999999988999999999999
Q ss_pred HHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCC
Q 002897 761 ILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMES 840 (869)
Q Consensus 761 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 840 (869)
|++|||++|..||...... ................ .....++.+.+++.+|+. +
T Consensus 227 ~il~el~~G~~Pf~~~~~~-----~~~~~i~~~~~~~~~~--------------------~~~~~s~~~~~li~~ll~-~ 280 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQ-----ETYRKIINWKETLQFP--------------------DEVPLSPEAKDLIKRLCC-E 280 (364)
T ss_pred hHHHHhhcCCCCCCCCCHH-----HHHHHHHcCCCccCCC--------------------CCCCCCHHHHHHHHHHcc-C
Confidence 9999999999999753211 1111110000000000 000123456788999996 9
Q ss_pred CCCCCC---HHHHHH
Q 002897 841 PTDRMQ---MRDVVV 852 (869)
Q Consensus 841 P~~RPs---~~evl~ 852 (869)
|.+|++ ++|+++
T Consensus 281 p~~R~~~~~~~~ll~ 295 (364)
T cd05599 281 AERRLGNNGVNEIKS 295 (364)
T ss_pred HhhcCCCCCHHHHhc
Confidence 999998 888876
No 84
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.7e-37 Score=340.88 Aligned_cols=267 Identities=25% Similarity=0.361 Sum_probs=207.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeeccc-chhhHHHHHHHHHHHhCC-CCccceEEEEeeccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQ-KGALKSFLTECEALRSIR-HRNLIKIITICSSID 624 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 624 (869)
..++|++.++||+|+||.||+|++.. .+..||||+++... ....+.+.+|+++++++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 35689999999999999999998742 24579999996433 333467899999999996 99999999997543
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcc--------------------------------------------------
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKL-------------------------------------------------- 654 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 654 (869)
...++||||+++|+|.+++.......
T Consensus 114 ----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 114 ----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 67899999999999999987642100
Q ss_pred ----------------------------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 002897 655 ----------------------------------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPS 694 (869)
Q Consensus 655 ----------------------------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 694 (869)
....+++..+..++.|+++||+|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 012478889999999999999999999 9999999999
Q ss_pred ceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCC
Q 002897 695 NVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPT 773 (869)
Q Consensus 695 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf 773 (869)
||+++.++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~ 340 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPY 340 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 999999999999999999865432210 11223456788999999998899999999999999999997 99998
Q ss_pred CcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 774 DSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
................. ....+..++..+.+++.+||+.||++|||+.+|.+.
T Consensus 341 ~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 393 (400)
T cd05105 341 PGMIVDSTFYNKIKSGY---------------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI 393 (400)
T ss_pred cccchhHHHHHHHhcCC---------------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence 75322211111100000 000112345678899999999999999999999999
Q ss_pred HHHHHH
Q 002897 854 LCAARE 859 (869)
Q Consensus 854 L~~~~~ 859 (869)
|+++.+
T Consensus 394 l~~l~~ 399 (400)
T cd05105 394 VESLLP 399 (400)
T ss_pred HHHHcC
Confidence 987653
No 85
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.9e-38 Score=337.50 Aligned_cols=243 Identities=24% Similarity=0.321 Sum_probs=194.9
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|.+..+|+.||+|+++.. .......+..|+++++.++||||+++.+++.. .+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-----~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc-----CCEEEEEEe
Confidence 4799999999999999989999999999743 22344667889999999999999999988654 378999999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999987654 38999999999999999999997 6 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i~~~~~ 213 (325)
T cd05594 147 IKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEEI 213 (325)
T ss_pred CCCC--------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHHhcCCC
Confidence 2211 122335689999999999998999999999999999999999999964221 111111110000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVK 853 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 853 (869)
..+...+..+.+++.+||+.||++|+ ++.|+++.
T Consensus 214 ------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 ------------------------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred ------------------------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00012334677999999999999997 89998753
No 86
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.5e-37 Score=335.20 Aligned_cols=245 Identities=26% Similarity=0.344 Sum_probs=193.5
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHH---HhCCCCccceEEEEeeccccCCCc
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEAL---RSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
|++.+.||+|+||.||+|.+..+|+.||||+++... ....+.+.+|++++ +.++||||+++++++.. ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-----~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT-----ED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-----CC
Confidence 677899999999999999999899999999997432 23345666776665 45689999999998654 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 899999999999999888653 289999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+++...... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....
T Consensus 146 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~ 212 (324)
T cd05589 146 GLCKEGMGFG--------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDS 212 (324)
T ss_pred cCCccCCCCC--------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 9986432211 2223456899999999999989999999999999999999999999753211 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
...... ..+...+..+.+++.+||+.||++|| ++.|+++
T Consensus 213 i~~~~~------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 213 IVNDEV------------------------RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHhCCC------------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 110000 00112345677999999999999999 4666654
No 87
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.4e-37 Score=321.74 Aligned_cols=256 Identities=25% Similarity=0.454 Sum_probs=205.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.++||||+++++++... ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCcEE
Confidence 45888899999999999999998889999999986433 3356788999999999999999999987543 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++..... ..+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999976432 2489999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||...+..++.++|||||||++|||++ |..||..... .+.......
T Consensus 153 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~ 220 (263)
T cd05052 153 LMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEK 220 (263)
T ss_pred cccccee-------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHC
Confidence 6644321 11112234668999999998899999999999999999998 9999864211 111111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
. . ....++.++..+.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 221 ~-~----------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 G-Y----------------------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred C-C----------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0 0 0001113456788999999999999999999999998865
No 88
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-37 Score=349.52 Aligned_cols=254 Identities=20% Similarity=0.250 Sum_probs=203.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCC-CeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGEN-GMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.|.+.+.||+|++|.||+|....+ ++.||+|.+..........+..|+.+++.++||||+++++++... +..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CEEEE
Confidence 488999999999999999998877 788999987655555556788999999999999999999997653 78999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... ...++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 143 v~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 9999999999998865321 123488999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 218 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~ 286 (478)
T PTZ00267 218 QYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYG 286 (478)
T ss_pred ecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhC
Confidence 7643221 1123345699999999999998999999999999999999999999964221 1111111110
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. + +.+..++..+.+++.+||+.||++||+++|++.
T Consensus 287 ~~----~-------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 287 KY----D-------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CC----C-------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00 0 001123456889999999999999999999975
No 89
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.2e-37 Score=341.20 Aligned_cols=260 Identities=20% Similarity=0.245 Sum_probs=198.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.|+..+.||+|+||+||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++.+ .+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~-----~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD-----KDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec-----CCEE
Confidence 5888999999999999999999999999999996532 3345678999999999999999999999764 3789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 99999999999999997654 388999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCcc---------------------------------------ccCCCCCCccCcccccCCcccCCCCCCc
Q 002897 712 AKFLPARPLDTVV---------------------------------------ETPSSSSGIKGTVGYIAPEYGTGSEASM 752 (869)
Q Consensus 712 a~~~~~~~~~~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 752 (869)
+............ ..........||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 8643211100000 0000112357999999999999888999
Q ss_pred cccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHH
Q 002897 753 TGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRI 832 (869)
Q Consensus 753 ~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 832 (869)
++|||||||++|||++|+.||........ ....... .... . .+.......++.++
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~-~~~i~~~--~~~~-~---------------------~~~~~~~s~~~~dl 282 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTET-QLKVINW--ENTL-H---------------------IPPQVKLSPEAVDL 282 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHH-HHHHHcc--cccc-C---------------------CCCCCCCCHHHHHH
Confidence 99999999999999999999975322111 0000000 0000 0 00000123456677
Q ss_pred Hhh--ccCCCCCCCCCHHHHHHH
Q 002897 833 GVV--CSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 833 i~~--cl~~dP~~RPs~~evl~~ 853 (869)
+.+ |+..+|..||+++|+++.
T Consensus 283 i~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 283 ITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHccCcccccCCCCHHHHhcC
Confidence 777 556677779999999873
No 90
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2e-37 Score=349.82 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=208.2
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC-
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN- 626 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 626 (869)
....++|++.+.||+|+||+||+|++..+|+.||||+++.. .......+.+|+..+..++|+|++++.+.+...+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34557999999999999999999999989999999998643 334456788999999999999999988766543211
Q ss_pred --CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 627 --GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 627 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
.....++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 112468999999999999999764321 23589999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..
T Consensus 183 kL~DFGls~~~~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~ 251 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSD------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----ME 251 (496)
T ss_pred EEEecccCeeccccccc------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HH
Confidence 99999999866432211 12234569999999999999999999999999999999999999996421 11
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
............ +.+..++..+.+++.+||+.||++||++.|+++.
T Consensus 252 ~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 252 EVMHKTLAGRYD-----------------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHhcCCCC-----------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 221111111000 0111344568899999999999999999999863
No 91
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=311.64 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=210.7
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
|.+..+||+|+||.||+|.++++|+.+|||.+... ....++.+|+.++++++.|++|+++|.|.. ....||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEeeh
Confidence 56778999999999999999999999999998653 346889999999999999999999997643 36789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
|||..|+..+.++.++. ++++.++..+.+..++||+|||.. .-+|||||+.|||++.+|.+||+|||.|..+
T Consensus 108 EYCGAGSiSDI~R~R~K-----~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRK-----PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred hhcCCCcHHHHHHHhcC-----CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh
Confidence 99999999999988765 499999999999999999999999 8999999999999999999999999999765
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.+.. .....+.||+.|||||++..-.|+.++||||+|++..||..|++||.+...-...+ .++.
T Consensus 180 TDTM--------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIPT-- 243 (502)
T KOG0574|consen 180 TDTM--------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIPT-- 243 (502)
T ss_pred hhhH--------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------eccC--
Confidence 5432 44566889999999999998889999999999999999999999997643321100 0000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
+.+.....+++.+.++.++++.|+-..|++|-||.++++.
T Consensus 244 ------------------~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 244 ------------------KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ------------------CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1111223456778889999999999999999999998863
No 92
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-37 Score=326.17 Aligned_cols=273 Identities=25% Similarity=0.344 Sum_probs=205.1
Q ss_pred CC-CCCCeeeeecceEEEEEEE----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EF-SSSNMVGQGSFGTVFKGII----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+| ++.+.||+|+||+||++.. ..+++.||+|+++... ....+.+.+|++++++++||||+++++++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GG 80 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 44 8889999999999987653 3578899999986543 23456788999999999999999999987542 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... +++.+++.++.|++.|++|||++ +|+||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~d 150 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGD 150 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEee
Confidence 56899999999999999997643 89999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+.......... .......++..|+|||...+..++.++||||||+++|||++|..||...... ......
T Consensus 151 fg~~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~---~~~~~~ 222 (283)
T cd05080 151 FGLAKAVPEGHEYY-----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK---FEEMIG 222 (283)
T ss_pred cccccccCCcchhh-----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch---hhhhhc
Confidence 99998765432110 1112234567799999998888999999999999999999999998643221 111110
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
.... ......+....... .....+..++..+.+++.+||+.+|++|||+++|++.|+++.
T Consensus 223 ~~~~----~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 223 PKQG----QMTVVRLIELLERG------MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred cccc----ccchhhhhhhhhcC------CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0000 00000000000000 000111235567899999999999999999999999998875
No 93
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5e-37 Score=326.21 Aligned_cols=278 Identities=20% Similarity=0.296 Sum_probs=200.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhC---CCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSI---RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|++.+.||+|+||+||+|++..+|+.||+|.++... ......+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999999999999999986432 22234566777777665 799999999988765444456
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++ +|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 78999999975 89998876542 2389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|++....... ......|+..|+|||++.+..++.++||||+||++|+|++|++||....... ........
T Consensus 153 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~ 222 (288)
T cd07863 153 GLARIYSCQM---------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDL 222 (288)
T ss_pred CccccccCcc---------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHH
Confidence 9997654321 1223467899999999998899999999999999999999999986532211 11111111
Q ss_pred hcccccccc-cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEI-VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... .+......... ...........++....+.+++.+|++.||++|||+.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFS--PRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCCCChhhCcccccccccccC--CCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 00000000000 00000000111234566789999999999999999999975
No 94
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-37 Score=323.62 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----EKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----CEEE
Confidence 35799999999999999999999889999999999765555556788999999999999999999987643 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.++++... ++++..+..++.|++.|++|||+. +|+|||++|+||+++.++.++|+|||.+
T Consensus 83 iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987643 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
....... .......|+..|+|||.+. ...++.++||||+||++|||++|+.||......... ..+..
T Consensus 154 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~- 223 (267)
T cd06646 154 AKITATI--------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSK- 223 (267)
T ss_pred eeecccc--------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeec-
Confidence 8654321 1122345889999999874 345788999999999999999999998543211000 00000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.. ...+.. ......+..+.+++.+||+.+|++|||++++++.+
T Consensus 224 ---~~---~~~~~~----------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 224 ---SN---FQPPKL----------------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ---CC---CCCCCC----------------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 00 000000 00112345688999999999999999999998743
No 95
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.3e-37 Score=331.72 Aligned_cols=242 Identities=21% Similarity=0.324 Sum_probs=190.5
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|+.++.++ +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----ESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-----CCEEEEEE
Confidence 4799999999999999999999999999753 233445678899988877 89999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999887654 389999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc---hHHHh-hhhhc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL---TLHEF-SKMVL 791 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~---~~~~~-~~~~~ 791 (869)
.... .......||..|+|||++.+..++.++|||||||++|||++|+.||........ ....+ .....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~ 218 (329)
T cd05618 147 LRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 218 (329)
T ss_pred cCCC--------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh
Confidence 2211 122345689999999999999999999999999999999999999963221110 00111 11110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
.... ..+......+.+++.+||+.||++||++
T Consensus 219 ~~~~------------------------~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 219 EKQI------------------------RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred cCCC------------------------CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0000 0011234557799999999999999984
No 96
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=4.3e-37 Score=331.96 Aligned_cols=247 Identities=21% Similarity=0.329 Sum_probs=193.9
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|++..+++.||+|+++.. .....+.+..|..+++.+ +||||+++++++... ...++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 4799999999999999999999999999753 223345678999999988 799999999986543 7889999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999987654 389999999999999999999999 9999999999999999999999999998642
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC---chHHHhh-hhhc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG---LTLHEFS-KMVL 791 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~---~~~~~~~-~~~~ 791 (869)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||+...... .....+. +...
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~ 218 (329)
T cd05588 147 IRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL 218 (329)
T ss_pred ccCC--------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH
Confidence 2111 12234568999999999999999999999999999999999999996422111 0011111 1110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC------HHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ------MRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 852 (869)
.... ..+...+..+.+++.+|++.||++||+ ++|+++
T Consensus 219 ~~~~------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 219 EKQI------------------------RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred cCCC------------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 0000 001123446789999999999999998 567654
No 97
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-37 Score=338.85 Aligned_cols=255 Identities=18% Similarity=0.243 Sum_probs=200.6
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..++|++.++||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+ .
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~-----~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD-----D 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 4568999999999999999999999999999999996432 2334557889999999999999999988654 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 78999999999999999987643 78889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
||.+........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||......
T Consensus 186 fG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----- 253 (370)
T cd05596 186 FGTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV----- 253 (370)
T ss_pred ccceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-----
Confidence 999976543211 112345699999999987653 4789999999999999999999999753211
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVVK 853 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 853 (869)
........... ... .+.....+..+.+++.+|++.+|++ |||++|+++.
T Consensus 254 ~~~~~i~~~~~-~~~-------------------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 254 GTYSKIMDHKN-SLT-------------------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHHHHHcCCC-cCC-------------------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11111110000 000 0000123456789999999999988 9999999764
No 98
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.9e-37 Score=322.98 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|++.+.||+|+||+||+|.+..+++ .|++|.+.... .....++..|+.++++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 578889999999999999999976666 47777775332 2334677888889999999999999998642
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++++||+++|+|.+++..... .+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 346789999999999999986543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.++....... ........++..|+|||+..++.++.++|||||||++||+++ |+.||...... ...+..
T Consensus 153 fg~~~~~~~~~~------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~ 224 (279)
T cd05111 153 FGVADLLYPDDK------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLL 224 (279)
T ss_pred CccceeccCCCc------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 999986543321 012233457788999999998899999999999999999998 99998653211 111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
... . .... +..++..+.+++.+||..+|++|||+.|+++.|..+.+.
T Consensus 225 ~~~---~--~~~~---------------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 225 EKG---E--RLAQ---------------------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HCC---C--cCCC---------------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 100 0 0000 011234567899999999999999999999999887664
No 99
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-38 Score=334.00 Aligned_cols=247 Identities=23% Similarity=0.450 Sum_probs=208.8
Q ss_pred CCCeeeeecceEEEEEEECCCCeEEEEEEeec----ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 558 SSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL----MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
...+||+|+|-+||+|.+..+|..||--.++. ..+...++|..|+.+|+.|+||||++++++|.+.. ....-+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeee
Confidence 45689999999999999999999998544431 23445689999999999999999999999988752 356789
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEEEcccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAHVGDFGLA 712 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg~a 712 (869)
|+|.+..|+|..|.++.+. ++.+.+..|++||++||.|||++ .|+|+|||||.+||||+.+ |.|||+|+|+|
T Consensus 121 iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 9999999999999998875 88999999999999999999998 8999999999999999764 79999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... ....++|||.|||||++. ..|++.+||||||+++.||+|+..||.........+.+......|
T Consensus 194 tl~r~s----------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP 262 (632)
T KOG0584|consen 194 TLLRKS----------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP 262 (632)
T ss_pred HHhhcc----------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH
Confidence 876543 233478999999999987 689999999999999999999999998765555555555555555
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..+..+-|| ++.++|.+|+.. .++|||+.|+++
T Consensus 263 ~sl~kV~dP--------------------------evr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 263 AALSKVKDP--------------------------EVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHhhccCCH--------------------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence 555555554 366899999999 999999999986
No 100
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.3e-37 Score=319.26 Aligned_cols=251 Identities=28% Similarity=0.438 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.+.||+|+||.||+|.++ ++..+|+|.+.... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CCEEE
Confidence 46888999999999999999986 56789999886432 2346788999999999999999999987543 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 9999999999999976543 388999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||...+..++.++||||||+++|||++ |+.||...... ........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-----~~~~~i~~ 216 (256)
T cd05114 149 YVLDDEY-------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-----EVVEMISR 216 (256)
T ss_pred ccCCCce-------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHHHHC
Confidence 6543211 11122345678999999988889999999999999999999 89998643211 11111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.. .... +...+..+.+++.+||+.+|++|||++|+++.|
T Consensus 217 ~~--~~~~---------------------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 217 GF--RLYR---------------------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CC--CCCC---------------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 00 0000 011234678999999999999999999999876
No 101
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=332.63 Aligned_cols=198 Identities=27% Similarity=0.384 Sum_probs=173.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-C-----CccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-H-----RNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~ 627 (869)
.+|.+.++||+|.||.|.+|.+..+++.||||+++... ....+...|+.+|..++ | -|+|++++++..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f----- 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF----- 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc-----
Confidence 38899999999999999999999999999999996543 34567789999999996 4 389999999655
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC--cEE
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM--VAH 705 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~k 705 (869)
.++.|||+|.++. +|+++++.+.- .+++...++.++.||+.||.+||+. +|||+||||+|||+.+.+ .+|
T Consensus 260 r~HlciVfELL~~-NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vK 331 (586)
T KOG0667|consen 260 RNHLCIVFELLST-NLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIK 331 (586)
T ss_pred ccceeeeehhhhh-hHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCcee
Confidence 4899999999955 99999998864 3699999999999999999999999 999999999999996544 799
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
|+|||.|+...... ...+.+..|+|||++.|.+|+.+.||||||||++||++|.+.|.+.
T Consensus 332 VIDFGSSc~~~q~v-----------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 332 VIDFGSSCFESQRV-----------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EEecccccccCCcc-----------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 99999998765432 1456789999999999999999999999999999999998888654
No 102
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.6e-37 Score=335.90 Aligned_cols=208 Identities=24% Similarity=0.328 Sum_probs=176.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|.+..+++.||+|+++... ......+..|+.++.+++||+|+++++.+.+ ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 47899999999999999999999899999999996432 2334567889999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 999999999999999998654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc---------------------------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHH
Q 002897 711 LAKFLPARPLDTVV---------------------------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILL 763 (869)
Q Consensus 711 ~a~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il 763 (869)
+++........... ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 99765432110000 000011245799999999999998999999999999999
Q ss_pred HHHHcCCCCCCc
Q 002897 764 LEMFSRRRPTDS 775 (869)
Q Consensus 764 ~el~tg~~pf~~ 775 (869)
|||++|+.||..
T Consensus 227 ~ell~G~~Pf~~ 238 (363)
T cd05628 227 YEMLIGYPPFCS 238 (363)
T ss_pred HHHHhCCCCCCC
Confidence 999999999975
No 103
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.4e-37 Score=324.56 Aligned_cols=261 Identities=28% Similarity=0.473 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|.+.+.||+|+||.||+|.+. .+++.||+|.++..... ..+.+.+|+++++.++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC---
Confidence 356888999999999999999874 24678999998755443 457889999999999999999999997653
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCC--------cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNND--------KLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
...++||||+++++|.+++..... ......+++..+..++.|++.|++|||+. +++||||||+||++
T Consensus 81 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 81 --DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred --CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 678999999999999999986542 11223478999999999999999999999 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCc
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMF 777 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~ 777 (869)
+.++.+||+|||.+......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~ 229 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS 229 (280)
T ss_pred cCCCeEEECCcccceecccCcce------ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999765332110 11223345788999999999999999999999999999998 999986432
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.. ........... ...+..++..+.+++.+||+.||++||++.||++.|+
T Consensus 230 ~~-----~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 230 NE-----EVIECITQGRL-----------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HH-----HHHHHHHcCCc-----------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 21 11111100000 0001134456889999999999999999999999885
No 104
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.4e-37 Score=330.72 Aligned_cols=241 Identities=24% Similarity=0.335 Sum_probs=190.2
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 47999999999999999899999999997432 23345566677777654 89999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999997654 389999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~~- 212 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILNDR- 212 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCC-
Confidence 3221 222345689999999999998999999999999999999999999975321 11111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR-DVV 851 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 851 (869)
+ ..+..++..+.+++.+||+.||++||++. +++
T Consensus 213 -----~------------------~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 213 -----P------------------HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred -----C------------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 00012334567999999999999999875 443
No 105
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=347.04 Aligned_cols=279 Identities=20% Similarity=0.267 Sum_probs=196.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc---CCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF---NGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~ 629 (869)
..+|++.++||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++....+ ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999998899999999885322 234579999999999999999988654322 1223
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEcc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGD 708 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~D 708 (869)
..++||||+++ ++.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 57799999975 787777542211 22489999999999999999999999 999999999999998665 799999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||....... .+....
T Consensus 215 FGla~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~ 284 (440)
T PTZ00036 215 FGSAKNLLAGQ---------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRII 284 (440)
T ss_pred cccchhccCCC---------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence 99998654321 12234689999999987664 68999999999999999999999997532211 111111
Q ss_pred hhhcccc--cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEK--VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... ......+.... ...............+...+.++.+++.+||++||++|||+.|+++
T Consensus 285 ~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 285 QVLGTPTEDQLKEMNPNYAD-IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHhCCCCHHHHHHhchhhhc-ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 1110000 00000000000 0000000000000011123467889999999999999999999985
No 106
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.1e-37 Score=326.67 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=204.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||+|++|.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++... ...++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-----~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CEEEE
Confidence 5799999999999999999999889999999999765555567889999999999999999999987643 68899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++.... +++.++..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||.+.
T Consensus 95 v~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 95 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred eecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 999999999999986542 78999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......|++.|+|||.+.+..++.++|||||||++|+|++|+.||....... .+.... ..
T Consensus 165 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~~~-~~ 231 (296)
T cd06654 165 QITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYLIA-TN 231 (296)
T ss_pred hccccc--------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHHHh-cC
Confidence 654321 11223468899999999988889999999999999999999999996432211 111000 00
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... ...++..+..+.+++.+||..+|++|||+.|+++.
T Consensus 232 ~~~~---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 232 GTPE---------------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCCC---------------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0000 00112344567899999999999999999999873
No 107
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.4e-37 Score=329.80 Aligned_cols=237 Identities=27% Similarity=0.358 Sum_probs=190.8
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|++..+++.||+|+++.. .....+.+..|..++... +||||+++++++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~-----~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT-----PDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-----CCEEEEEE
Confidence 4799999999999999989999999998643 233456677888888877 79999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 9999999999987654 389999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~~ 213 (320)
T cd05590 147 IFNG--------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILNDEV 213 (320)
T ss_pred CcCC--------CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhcCCC
Confidence 2211 122345689999999999988999999999999999999999999975321 111111111100
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
. .+...+..+.+++.+|++.||++||++
T Consensus 214 ---~---------------------~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 214 ---V---------------------YPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred ---C---------------------CCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 0 001133457799999999999999998
No 108
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.4e-36 Score=320.14 Aligned_cols=265 Identities=25% Similarity=0.396 Sum_probs=204.7
Q ss_pred CCCCCeeeeecceEEEEEEECCC---CeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCCc
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGVD 629 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 629 (869)
|.+.+.||+|+||.||+|....+ +..||+|+++... ......+.+|++.++.++||||+++++++..... .+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999998643 4789999986432 3345678999999999999999999998765432 3344
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++...........+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986643222223589999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||...... +...
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~~ 226 (273)
T cd05035 158 GLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIYD 226 (273)
T ss_pred cceeeccccccc------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH
Confidence 999866443211 11112234678999999988889999999999999999999 88888642211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
....... ...+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 227 ~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 YLRHGNR-----------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HHHcCCC-----------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1110000 001113455788999999999999999999999999875
No 109
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=9.5e-37 Score=324.19 Aligned_cols=267 Identities=27% Similarity=0.445 Sum_probs=210.4
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG----- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC-----
Confidence 46888899999999999999863 34567999998766555567889999999999999999999997543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
...++||||+++++|.+++...... .....+++..++.++.||+.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 6789999999999999999764321 0112389999999999999999999999 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCc
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMF 777 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~ 777 (869)
+.++.++|+|||.+........ ........++..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred ccCCcEEECCCCcccccCCCce------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999976543221 011233456789999999998899999999999999999999 999986432
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.. ............. ....++..+.+++.+||+.+|++|||+.+|++.|.++
T Consensus 231 ~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 231 NT-----EVIECITQGRVLE-----------------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HH-----HHHHHHhCCCCCC-----------------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 21 1111111100000 0112345688999999999999999999999999999
Q ss_pred HHhhh
Q 002897 858 REAFV 862 (869)
Q Consensus 858 ~~~~~ 862 (869)
.+..+
T Consensus 283 ~~~~~ 287 (291)
T cd05094 283 GKATP 287 (291)
T ss_pred HhhcC
Confidence 77644
No 110
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.8e-37 Score=332.61 Aligned_cols=243 Identities=23% Similarity=0.318 Sum_probs=194.1
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|++..+++.||+|+++.. .....+.+..|.+++..+ +||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT-----KDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCeEEEEE
Confidence 4699999999999999989999999999643 233445677899998876 79999999998754 37789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999987654 388999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......|++.|+|||++.+..++.++||||+||++|||++|+.||...... ...........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~~i~~~~~ 213 (321)
T cd05591 147 ILNG--------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFESILHDDV 213 (321)
T ss_pred ccCC--------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCC
Confidence 3221 1223456899999999999889999999999999999999999999753211 11111111100
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-------QMRDVVVK 853 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~ 853 (869)
. .+...+.++.+++.+|++.||++|| +++++++.
T Consensus 214 ---~---------------------~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 ---L---------------------YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ---C---------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 0 0011234677999999999999999 77777653
No 111
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.9e-37 Score=333.00 Aligned_cols=242 Identities=23% Similarity=0.309 Sum_probs=192.7
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCC-ccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHR-NLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 630 (869)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|+++++.++|+ +|+++.+++.. .+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-----MDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc-----CCE
Confidence 588899999999999999999989999999999643 233456778899999999765 57778877544 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 999999999999999997654 378999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++....... .......||+.|+|||++.+..++.++||||+||++|+|+||+.||...... ......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i 213 (324)
T cd05587 147 MCKENIFGG--------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----ELFQSI 213 (324)
T ss_pred cceecCCCC--------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHH
Confidence 986432211 1223456899999999999989999999999999999999999999753211 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
..... ..+...+..+.+++.+||..||++||++
T Consensus 214 ~~~~~------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 214 MEHNV------------------------SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred HcCCC------------------------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 10000 0001233457799999999999999986
No 112
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-36 Score=320.01 Aligned_cols=265 Identities=24% Similarity=0.401 Sum_probs=203.0
Q ss_pred CCCCCeeeeecceEEEEEEECCCCe--EEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCce
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGM--LVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVDF 630 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 630 (869)
|.+.++||+|+||.||+|++..++. .||+|.++.. .....+.+.+|+++++.++||||+++++++.... ......
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999876665 6999988643 3444677899999999999999999999875431 122345
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+++|||+++|+|.+++...........+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999885433221223489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~ 789 (869)
.++........ .......+++.|+|||...+..++.++|||||||++|||++ |+.||..... ......
T Consensus 158 ~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~ 226 (272)
T cd05075 158 LSKKIYNGDYY------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----SEIYDY 226 (272)
T ss_pred cccccCcccce------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 99876443210 11122345778999999998899999999999999999999 8889864221 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
....... .....++..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 227 ~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 LRQGNRL-----------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHcCCCC-----------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1100000 00112345678999999999999999999999999875
No 113
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=7.2e-37 Score=322.84 Aligned_cols=262 Identities=23% Similarity=0.414 Sum_probs=202.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 4678999999999999999999864 245789999985432 2334568899999999999999999998654
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLE----VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
....++||||+++|+|.+++.......+ ...+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 81 --~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 81 --GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred --CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 3678999999999999999976432211 12367889999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~ 780 (869)
+.++|+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-- 227 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-- 227 (277)
T ss_pred CCEEECCCCCccccCCccee------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 99999999998765432210 11112345788999999998889999999999999999999 7888864321
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.............. .+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 228 ---~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 ---EQVLRFVMEGGLLD-----------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---HHHHHHHHcCCcCC-----------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11111111110000 01123456889999999999999999999998875
No 114
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.9e-37 Score=330.83 Aligned_cols=243 Identities=21% Similarity=0.291 Sum_probs=193.1
Q ss_pred CCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 559 SNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++||+|+||.||+|+.. .+++.||+|+++... ......+..|+++++.++||||+++++++.. .+..
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT-----GGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec-----CCeE
Confidence 368999999999999873 478899999996432 2233567889999999999999999998654 3678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 146 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGL 146 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcC
Confidence 99999999999999997654 378889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
++...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 147 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~ 213 (323)
T cd05584 147 CKESIHEG--------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKIL 213 (323)
T ss_pred CeecccCC--------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHH
Confidence 87532221 1223356899999999999888999999999999999999999999753211 1111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
.... ..+...+..+.+++.+||+.||++|| +++++++
T Consensus 214 ~~~~------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 214 KGKL------------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred cCCC------------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1100 00012234678999999999999999 7888766
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.2e-37 Score=324.87 Aligned_cols=253 Identities=24% Similarity=0.340 Sum_probs=200.5
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.|++.++||+|+||+||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++.. .+..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC-----CCeE
Confidence 4788899999999999999998899999999986432 2223456789999999999999999998654 3689
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999998865432 2489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~ 218 (285)
T cd05605 149 AVEIPEGE---------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVK 218 (285)
T ss_pred ceecCCCC---------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhh
Confidence 97654321 112346899999999999888999999999999999999999999753211 11111111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 853 (869)
.. ....+...+..+.+++.+||+.||++|| +++++++.
T Consensus 219 ~~------------------------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 219 ED------------------------QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred hc------------------------ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00 0001123455678999999999999999 88888664
No 116
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.5e-37 Score=335.27 Aligned_cols=257 Identities=17% Similarity=0.240 Sum_probs=199.3
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~---- 114 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD---- 114 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc----
Confidence 34457899999999999999999999989999999998642 22234567899999999999999999998654
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
....++||||+++|+|.+++.... +++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 115 -~~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 115 -DKYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred -CCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 478999999999999999997543 78899999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----CCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
+|||+|........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 184 ~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--- 253 (370)
T cd05621 184 ADFGTCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--- 253 (370)
T ss_pred EecccceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH---
Confidence 99999986643211 122345699999999998654 3788999999999999999999999743211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVVK 853 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 853 (869)
........... .. ..+.....+..+.+++..|+..+|.+ |||+.|+++.
T Consensus 254 --~~~~~i~~~~~-~~-------------------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 254 --GTYSKIMDHKN-SL-------------------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --HHHHHHHhCCc-cc-------------------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11111110000 00 00000123455678888999865543 8999999875
No 117
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.7e-37 Score=323.23 Aligned_cols=257 Identities=29% Similarity=0.466 Sum_probs=208.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
...+|++.++||.|+||.||+|.+.. ++.+|+|++..........+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-----EPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC-----CCe
Confidence 44679999999999999999999985 899999999766655567889999999999999999999987543 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 999999999999999986542 2489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+....... .......++..|+|||...+..++.++||||||+++|+|++ |+.||...... ........ .
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-~~~~~~~~-~ 220 (261)
T cd05148 151 ARLIKEDV--------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-EVYDQITA-G 220 (261)
T ss_pred hhhcCCcc--------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-HHHHHHHh-C
Confidence 97664322 11113345778999999988889999999999999999998 89998643211 11111100 0
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
. ..+.+..++..+.+++.+||+.||++|||++++++.|+.+
T Consensus 221 ~--------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 221 Y--------------------------RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred C--------------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 0001113445688999999999999999999999999753
No 118
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.2e-37 Score=337.31 Aligned_cols=260 Identities=21% Similarity=0.299 Sum_probs=204.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+|+.||+|+++... ......+..|+++++.++||||+++++++.+ .+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 47899999999999999999999899999999997432 2445678899999999999999999988654 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 999999999999999998763 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCc---------------------cccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC
Q 002897 711 LAKFLPARPLDTV---------------------VETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR 769 (869)
Q Consensus 711 ~a~~~~~~~~~~~---------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg 769 (869)
++........... ...........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 9986654320000 0000122345689999999999999999999999999999999999
Q ss_pred CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-HH
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-MR 848 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ 848 (869)
+.||...... ......... .... ..+....++..+.+++.+|++ ||++||+ ++
T Consensus 227 ~~Pf~~~~~~-----~~~~~i~~~-~~~~-------------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~ 280 (350)
T cd05573 227 FPPFYSDTLQ-----ETYNKIINW-KESL-------------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFE 280 (350)
T ss_pred CCCCCCCCHH-----HHHHHHhcc-CCcc-------------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHH
Confidence 9999753211 111111000 0000 000000134567899999998 9999999 99
Q ss_pred HHHHH
Q 002897 849 DVVVK 853 (869)
Q Consensus 849 evl~~ 853 (869)
|+++.
T Consensus 281 ~ll~h 285 (350)
T cd05573 281 EIKSH 285 (350)
T ss_pred HHhcC
Confidence 99874
No 119
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=6.7e-37 Score=323.08 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=194.4
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||+||+|.+..+|+.||+|.+.... ....+.+..|+++++.++||||+++.+++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT-----KTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC-----CCeEEEEEeCC
Confidence 699999999999999999999999986432 2233567889999999999999999988654 36789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++|+|.+++...... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.++|+|||.+......
T Consensus 76 ~~g~L~~~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDEE--NPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 999999887543211 22489999999999999999999999 9999999999999999999999999999765443
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. .......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 151 ~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~---- 217 (280)
T cd05608 151 Q--------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS---- 217 (280)
T ss_pred C--------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC----
Confidence 2 11233568999999999999999999999999999999999999997532211 1111111111000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
...++..+..+.+++.+||+.||++|| +++|+++
T Consensus 218 --------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 218 --------------------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred --------------------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 001123455678999999999999999 6777775
No 120
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.5e-37 Score=352.38 Aligned_cols=274 Identities=23% Similarity=0.310 Sum_probs=208.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.++||+|+||.||+|++..+|+.||+|+++... ....+++.+|++++++++||||+++++++.+. +.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~-----~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG-----DP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC-----CE
Confidence 57999999999999999999999899999999986432 23346789999999999999999999987653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcc-----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKL-----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
.++||||+++|+|.+++....... .....++..++.++.||++||+|||+. ||+||||||+||+++.++.++
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 899999999999999987532110 112367788899999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCc----------cccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 706 VGDFGLAKFLPARPLDTV----------VETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
|+|||+++.......... ...........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999987622110000 0000112335799999999999999999999999999999999999999965
Q ss_pred CccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHH
Q 002897 776 MFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-QMRDVVVKL 854 (869)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L 854 (869)
......... .. ..++. ......+.+..+.+++.+|++.||++|| +++++++.|
T Consensus 234 ~~~~ki~~~---~~--------i~~P~---------------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 234 KKGRKISYR---DV--------ILSPI---------------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred cchhhhhhh---hh--------ccChh---------------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 221110000 00 00000 0001123456688999999999999996 677778888
Q ss_pred HHHHHhh
Q 002897 855 CAAREAF 861 (869)
Q Consensus 855 ~~~~~~~ 861 (869)
+...+..
T Consensus 288 e~~lq~~ 294 (932)
T PRK13184 288 EPHLQGS 294 (932)
T ss_pred HHHHhcC
Confidence 7776543
No 121
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.3e-37 Score=321.86 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=193.7
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||.||+|+...+|+.||+|.+.... ......+..|++++++++||||+++.+++.. ....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 699999999999999899999999986322 1223455679999999999999999988654 37899999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999998865432 2488999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ................
T Consensus 149 ~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~-- 216 (277)
T cd05607 149 K---------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDEVK-- 216 (277)
T ss_pred c---------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccccc--
Confidence 1 112345899999999999888999999999999999999999998643221 1111111111110000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
......+.++.+++.+||+.||++||+++|+++..
T Consensus 217 ---------------------~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 217 ---------------------FEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ---------------------cccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 00012345678999999999999999998776444
No 122
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.2e-37 Score=318.58 Aligned_cols=249 Identities=27% Similarity=0.396 Sum_probs=196.7
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
+.||+|+||.||+|++..+++.||+|.+... ..+....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CCeEEEEeec
Confidence 4699999999999999889999999987543 233456789999999999999999999997543 6789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++..... .+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEGP-----RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999976442 388999999999999999999999 9999999999999999999999999998754432
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVME 797 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 797 (869)
... .......++..|+|||.+.++.++.++|||||||++|||++ |..||...... ........ ..
T Consensus 148 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-----~~~~~~~~-~~-- 213 (252)
T cd05084 148 VYA------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-----QTREAIEQ-GV-- 213 (252)
T ss_pred ccc------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-----HHHHHHHc-CC--
Confidence 110 01111223567999999998889999999999999999998 88888643211 11110000 00
Q ss_pred ccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 798 IVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 798 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
....+..++..+.+++.+|++.+|++|||+.||.+.|+
T Consensus 214 --------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 214 --------------------RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred --------------------CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 00111133557889999999999999999999999875
No 123
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=6.8e-37 Score=337.33 Aligned_cols=260 Identities=20% Similarity=0.245 Sum_probs=198.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.++||+|+||.||+|.+..+++.||||++... .....+.+.+|+++++.++||||+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-----~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-----AQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCe
Confidence 4789999999999999999999999999999998643 23345678899999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999997654 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCC---------cccc------------------------------CCCCCCccCcccccCCcccCCCCCC
Q 002897 711 LAKFLPARPLDT---------VVET------------------------------PSSSSGIKGTVGYIAPEYGTGSEAS 751 (869)
Q Consensus 711 ~a~~~~~~~~~~---------~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 751 (869)
+|+......... .... ........||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 996432211000 0000 0000124699999999999988999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHH
Q 002897 752 MTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIR 831 (869)
Q Consensus 752 ~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 831 (869)
.++|||||||++|||++|+.||...... ..+.............+ .......+.+
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~----~~~~~i~~~~~~~~~p~---------------------~~~~s~~~~d 281 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSH----ETYRKIINWRETLYFPD---------------------DIHLSVEAED 281 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHH----HHHHHHHccCCccCCCC---------------------CCCCCHHHHH
Confidence 9999999999999999999999643211 11111000000000000 0012345778
Q ss_pred HHhhccCCCCCCC---CCHHHHHHH
Q 002897 832 IGVVCSMESPTDR---MQMRDVVVK 853 (869)
Q Consensus 832 li~~cl~~dP~~R---Ps~~evl~~ 853 (869)
++.+|+. +|.+| +|+.|++..
T Consensus 282 li~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 282 LIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred HHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999997 67765 599998874
No 124
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=325.33 Aligned_cols=265 Identities=25% Similarity=0.452 Sum_probs=219.8
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
++++....+....++||-|.||.||.|.|+.-.-.||||.++. +....++|.+|+.+|+.++|||+|+++|+|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--- 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--- 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccC---
Confidence 3444444567778999999999999999998899999999854 344578999999999999999999999999864
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
...|||+|||..|+|.+|+++.... .++.-..+.++.||+.||+||..+ ++||||+.++|+||.++..+|+
T Consensus 336 --pPFYIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 336 --PPFYIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred --CCeEEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 6689999999999999999986542 367778889999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~ 785 (869)
+|||+++.+..+...... +..-...|.|||-+....++.|+|||+|||++||+.| |-.||.+. ...+
T Consensus 407 ADFGLsRlMtgDTYTAHA-------GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSq 474 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAHA-------GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQ 474 (1157)
T ss_pred eccchhhhhcCCceeccc-------CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHH
Confidence 999999998765432221 1223578999999999999999999999999999999 88888653 2222
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
.+... +.+.+...++.|++.+++|++.||+|+|++||+++|+-+.++.+..
T Consensus 475 VY~LL-----------------------EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 475 VYGLL-----------------------EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHHHH-----------------------hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 22211 1123344556899999999999999999999999999999887643
No 125
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.1e-37 Score=333.96 Aligned_cols=252 Identities=22% Similarity=0.271 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|.+..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 36889999999999999999999999999999997532 2345678899999999999999999988654 377
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 9999999999999999987633 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC------CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT------GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||......
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~----- 215 (330)
T cd05601 148 SAARLTANKM-------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA----- 215 (330)
T ss_pred CCeECCCCCc-------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----
Confidence 9986643321 1122346899999999876 456789999999999999999999999643211
Q ss_pred Hhhhhhccc-ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 785 EFSKMVLPE-KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... ..... +.....+..+.+++..|++ +|++|||++++++
T Consensus 216 ~~~~~i~~~~~~~~~---------------------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 216 KTYNNIMNFQRFLKF---------------------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHHHHcCCCccCC---------------------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 111111100 00000 0001234557789999998 9999999999885
No 126
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.8e-37 Score=323.17 Aligned_cols=251 Identities=29% Similarity=0.509 Sum_probs=192.7
Q ss_pred CCCeeeeecceEEEEEEEC----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 558 SSNMVGQGSFGTVFKGIIG----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+.+.||.|.||.||+|.+. ..+..|+||+++... ....+.+.+|++.+++++||||++++|++... ...+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc-----cccc
Confidence 3468999999999999997 346889999996533 33468899999999999999999999998743 5589
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..+..|+.||++||+|||++ +++|+||+++||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred cccccccccccccccccccc----ccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 99999999999999998721 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
......... .......+...|+|||.+.+..++.++||||||+++||+++ |+.||.... ...+.....
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~~~ 219 (259)
T PF07714_consen 151 RPISEKSKY------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEKLK 219 (259)
T ss_dssp EETTTSSSE------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHHHH
T ss_pred ccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccc
Confidence 876322110 12233446789999999988889999999999999999999 778876431 112111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
..... ..+..++..+.+++..||+.||++|||+.|+++.|
T Consensus 220 ~~~~~-----------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 QGQRL-----------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTEET-----------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ccccc-----------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 11000 01112455688999999999999999999999876
No 127
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.8e-37 Score=331.64 Aligned_cols=252 Identities=24% Similarity=0.299 Sum_probs=196.3
Q ss_pred CCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
+|++.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT---- 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEec----
Confidence 4888999999999999999874 478999999996432 22345678899999999 59999999988543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 77 -~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 77 -EAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 377899999999999999997654 389999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
+|||+++....... .......||..|+|||++.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 147 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~ 218 (332)
T cd05614 147 TDFGLSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSE 218 (332)
T ss_pred eeCcCCccccccCC-------CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHH
Confidence 99999976533221 112235689999999998765 47889999999999999999999996432211 1111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
+....... ++. .+...+..+.+++.+||+.||++|| +++|+++
T Consensus 219 ~~~~~~~~------~~~------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 219 VSRRILKC------DPP------------------FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHHHHhcC------CCC------------------CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111100 000 0112345678999999999999999 6777765
No 128
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.3e-36 Score=316.99 Aligned_cols=258 Identities=26% Similarity=0.414 Sum_probs=204.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCC---CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||+||+|.+..+ ...||+|.++... ......+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK-----S 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec-----C
Confidence 35789999999999999999998643 4689999986443 3345678899999999999999999998654 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++++|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||++++++.++|+|
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 678999999999999999977543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.+......... .......++..|+|||...+..++.++||||||+++|++++ |..||...... ...
T Consensus 150 fg~~~~~~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~~ 218 (266)
T cd05033 150 FGLSRRLEDSEAT------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DVI 218 (266)
T ss_pred cchhhcccccccc------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HHH
Confidence 9999877522110 11112335678999999998899999999999999999998 99998642211 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
....... ..+.+..++..+.+++.+||+.+|++||+++||++.|.++
T Consensus 219 ~~~~~~~-----------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 219 KAVEDGY-----------------------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHcCC-----------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1110000 0000113445688999999999999999999999999875
No 129
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-36 Score=319.62 Aligned_cols=262 Identities=22% Similarity=0.351 Sum_probs=208.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|++|.||+|++..+++.||||.+... .......+.+|+.+++.++||||+++++++... +.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC-----Ce
Confidence 4688899999999999999999889999999988643 223446788999999999999999999987643 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+++|||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 89999999999999998753211 12489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+....... .......|+..|+|||+..+..++.++||||||+++|+|++|..||.....+ ........
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~ 220 (267)
T cd08229 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKI 220 (267)
T ss_pred hhhccccCC--------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhh
Confidence 987654332 1122345889999999998888999999999999999999999998643221 11111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
. ....+ .......+..+.+++.+||+.||++|||+.+|++.++++.
T Consensus 221 ~-----~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 221 E-----QCDYP-----------------PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred h-----cCCCC-----------------CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 00000 0011234567889999999999999999999999998764
No 130
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-37 Score=308.60 Aligned_cols=260 Identities=25% Similarity=0.318 Sum_probs=208.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|+..+.||+|.-|+||+|+...++..+|+|++.+.. .....+.+.|-+||+.++||.++.+++.+. ....
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe-----t~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE-----TDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee-----ccce
Confidence 45667789999999999999999889999999997543 445678899999999999999999999854 4589
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+|||||+||+|....++.... .+++..++.++.+++-||+|||-. |||.|||||+||||.++|++.|+||.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~----~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGK----RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCC----ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 99999999999999999887654 599999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCC------------------------------c------------------cccCCCCCCccCcccccCC
Q 002897 711 LAKFLPARPLDT------------------------------V------------------VETPSSSSGIKGTVGYIAP 742 (869)
Q Consensus 711 ~a~~~~~~~~~~------------------------------~------------------~~~~~~~~~~~gt~~y~aP 742 (869)
++......+... . ......+..++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 886542211000 0 0111234557899999999
Q ss_pred cccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchH
Q 002897 743 EYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKI 822 (869)
Q Consensus 743 E~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 822 (869)
|++.|...+.++|-|+||+++|||+.|+.||.+...+. ++..... +...- +..
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~----~~l~F----------------------p~~ 357 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVG----QPLKF----------------------PEE 357 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhc----CCCcC----------------------CCC
Confidence 99999999999999999999999999999998754432 2222111 11000 001
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 002897 823 EECLVAVIRIGVVCSMESPTDRMQ----MRDVVV 852 (869)
Q Consensus 823 ~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 852 (869)
.+.+..+.+||++.|.+||++|.. |+||-+
T Consensus 358 ~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 358 PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred CcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 134566889999999999999997 777643
No 131
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.5e-37 Score=330.61 Aligned_cols=242 Identities=22% Similarity=0.302 Sum_probs=193.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+|++.+.||+|+||.||+|++..+++.||+|++.... ......+..|..++..+ +|++|+++++++.. .+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-----MDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec-----CCE
Confidence 5888999999999999999999899999999987432 22334567788888877 58899999888654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 899999999999999987654 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~~~i 213 (323)
T cd05616 147 MCKENMWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQSI 213 (323)
T ss_pred CceecCCCC--------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHHHHH
Confidence 987543221 1223456899999999999999999999999999999999999999753211 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
..... ..+...+.++.+++.+|++.||++|+++
T Consensus 214 ~~~~~------------------------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 214 MEHNV------------------------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HhCCC------------------------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 11000 0001234467799999999999999985
No 132
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-36 Score=318.18 Aligned_cols=255 Identities=24% Similarity=0.427 Sum_probs=202.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++.. .+..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK-----EEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcC-----CCCcE
Confidence 357899999999999999999975 67789999886433 235678999999999999999999998654 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+++|+|.++++.... ..+++..++.++.|+++|++|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999976432 2478999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||+..+..++.++|||||||++|+|++ |+.||...... ..........
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~ 221 (261)
T cd05072 151 RVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGY 221 (261)
T ss_pred eecCCCce-------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC
Confidence 87643221 11122345778999999988889999999999999999998 99998643211 1111110000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
. .+....++.++.+++.+|++.+|++||+++++.+.|++
T Consensus 222 --------~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 222 --------R------------------MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --------C------------------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0 00011234567899999999999999999999999875
No 133
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=6.6e-37 Score=328.26 Aligned_cols=242 Identities=24% Similarity=0.350 Sum_probs=191.4
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|++..+++.||+|+++... .........|..++... +||||+++++++.+. +..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK-----ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC-----CEEEEEE
Confidence 47999999999999999899999999997532 23345667788888765 899999999987543 6799999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999997653 388999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||..|+|||++.+..++.++||||+||++|||++|+.||..... ..........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~i~~~-- 211 (316)
T cd05619 147 MLGD--------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-----EELFQSIRMD-- 211 (316)
T ss_pred CCCC--------CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhC--
Confidence 2211 122345689999999999988999999999999999999999999974321 1111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH-HHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR-DVVV 852 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 852 (869)
.+. .+......+.+++.+||+.||++||++. ++.+
T Consensus 212 ----~~~------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 212 ----NPC------------------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred ----CCC------------------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 000 0011234577999999999999999997 5543
No 134
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.4e-37 Score=329.70 Aligned_cols=242 Identities=24% Similarity=0.309 Sum_probs=194.4
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|.+..+++.||+|+++... ......+..|.++++.+ +||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~-----~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT-----KDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-----CCEEEEEE
Confidence 47999999999999999899999999997532 33456678899999888 79999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999987654 389999999999999999999999 9999999999999999999999999998643
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||..... ............
T Consensus 147 ~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~i~~~~~ 213 (318)
T cd05570 147 ILGG--------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQSILEDEV 213 (318)
T ss_pred CcCC--------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCC
Confidence 2211 122334689999999999999999999999999999999999999964321 111111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM-----RDVVV 852 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 852 (869)
..+...+..+.+++.+||+.||++|||+ .++++
T Consensus 214 ------------------------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 ------------------------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ------------------------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0001234567899999999999999999 77765
No 135
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=7.8e-37 Score=327.74 Aligned_cols=275 Identities=21% Similarity=0.288 Sum_probs=200.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|.+.+.||+|+||.||+|++..+++.||+|.++... ......+.+|++++++++||||+++++++... +..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD-----KSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC-----CeEE
Confidence 57999999999999999999999899999999986443 22335678899999999999999999997543 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999975 89888876543 378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
....... .......++..|+|||++.+ ..++.++||||+||++|+|+||+.||......+ ......+...
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~ 222 (309)
T cd07872 152 RAKSVPT--------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLG 222 (309)
T ss_pred eecCCCc--------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhC
Confidence 7543321 11223457899999998765 458899999999999999999999997532211 1111111110
Q ss_pred c--c-ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 P--E-KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~--~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. . .+....+............. ...........+.++.+++.+|++.||++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYK-PQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccC-CCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 0 00000000000000000000 00000011124456789999999999999999999987
No 136
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.9e-37 Score=337.91 Aligned_cols=260 Identities=20% Similarity=0.217 Sum_probs=197.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++.+ .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-----KDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc-----CCE
Confidence 47999999999999999999999999999999986432 2234667899999999999999999998654 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999999999997754 378899999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCc-----------------------------------cccCCCCCCccCcccccCCcccCCCCCCcccc
Q 002897 711 LAKFLPARPLDTV-----------------------------------VETPSSSSGIKGTVGYIAPEYGTGSEASMTGD 755 (869)
Q Consensus 711 ~a~~~~~~~~~~~-----------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sD 755 (869)
+|..+........ ...........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9854321100000 00000112357999999999999989999999
Q ss_pred chhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhh
Q 002897 756 VYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVV 835 (869)
Q Consensus 756 vwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 835 (869)
||||||++|||++|+.||....... ......... ..... +.....+..+.+++.+
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~-----~~~~i~~~~-~~~~~-------------------~~~~~~s~~~~~li~~ 281 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAE-----TQLKVINWE-TTLHI-------------------PSQAKLSREASDLILR 281 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHH-----HHHHHhccC-ccccC-------------------CCCCCCCHHHHHHHHH
Confidence 9999999999999999997532211 100000000 00000 0001123456677777
Q ss_pred ccCCCCCCCC---CHHHHHHH
Q 002897 836 CSMESPTDRM---QMRDVVVK 853 (869)
Q Consensus 836 cl~~dP~~RP---s~~evl~~ 853 (869)
|+ .+|++|+ |+.|+++.
T Consensus 282 l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 282 LC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred Hh-cCHhhcCCCCCHHHHhCC
Confidence 66 4999999 88998864
No 137
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-36 Score=321.39 Aligned_cols=262 Identities=25% Similarity=0.395 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
..+|++.++||+|+||+||+|++..+|+ .||+|+++.. .......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 4578899999999999999999876665 4899998643 33345678899999999999999999998753
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++++||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 346799999999999999986543 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||+++........ .......++..|+|||...+..++.++|||||||++|||++ |..||+..... ....+
T Consensus 152 dfG~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~ 223 (279)
T cd05109 152 DFGLARLLDIDETE------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDL 223 (279)
T ss_pred CCCceeecccccce------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 99999876533211 11112235678999999988889999999999999999998 89998643211 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
...... .+.+..++..+.+++.+||+.||++||++.|+++.|..+.....
T Consensus 224 ~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05109 224 LEKGER--------------------------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS 273 (279)
T ss_pred HHCCCc--------------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence 111000 00011234567899999999999999999999999988876553
No 138
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-36 Score=315.22 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=203.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|.+..+++.||+|.+... .....+.+.+|+++++.++|||++++++++... ...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 477889999999999999999999999999998643 344567789999999999999999999986543 7889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..++.++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999987532 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......|+..|+|||+..+..++.++|||||||++|+|++|+.||..... .........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~ 215 (256)
T cd08529 149 KLLSDNT--------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILKIIR 215 (256)
T ss_pred eeccCcc--------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHc
Confidence 8665432 112234578899999999998899999999999999999999999975321 111111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... ......++..+.+++.+||+.+|++||++.|+++.
T Consensus 216 ~~~-----------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 216 GVF-----------------------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCC-----------------------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000 00111344568899999999999999999999863
No 139
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.7e-37 Score=320.11 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=201.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++... +..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~-----~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR-----DKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----CEEE
Confidence 35788889999999999999999989999999999766555556788999999999999999999986543 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred EEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceee
Confidence 9999999999999987654 389999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
....... .......|+..|+|||++. ...++.++||||+||++|+|++|+.||......... ......
T Consensus 154 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~-~~~~~~ 224 (267)
T cd06645 154 AQITATI--------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMTKS 224 (267)
T ss_pred eEccCcc--------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhH-Hhhhcc
Confidence 7654321 1223456899999999874 456889999999999999999999998543211110 000000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. . ..+... ....++..+.+++.+|++.+|++|||++++++
T Consensus 225 ~----~---~~~~~~----------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 225 N----F---QPPKLK----------------DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred C----C---CCCccc----------------ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 0 000000 00012345779999999999999999999875
No 140
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.2e-37 Score=337.77 Aligned_cols=207 Identities=22% Similarity=0.296 Sum_probs=174.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+|++.++||+|+||+||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++.+ .+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~-----~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD-----KDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe-----CCEE
Confidence 6889999999999999999999999999999996432 2345678899999999999999999999764 3789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 99999999999999997654 378999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCc---------------------------------------cccCCCCCCccCcccccCCcccCCCCCCc
Q 002897 712 AKFLPARPLDTV---------------------------------------VETPSSSSGIKGTVGYIAPEYGTGSEASM 752 (869)
Q Consensus 712 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 752 (869)
|........... ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 864321100000 00000112357999999999999989999
Q ss_pred cccchhhhHHHHHHHcCCCCCCc
Q 002897 753 TGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 753 ~sDvwslG~il~el~tg~~pf~~ 775 (869)
++||||+||++|||++|+.||..
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCC
Confidence 99999999999999999999975
No 141
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.7e-37 Score=327.97 Aligned_cols=241 Identities=24% Similarity=0.334 Sum_probs=190.9
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|++..+|+.||+|+++... .........|..++... +||+|+++++++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 47999999999999999999999999997532 23345667788888765 89999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999987654 388999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~~~~~~~~-- 211 (316)
T cd05620 147 VFGD--------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DELFESIRVD-- 211 (316)
T ss_pred ccCC--------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhC--
Confidence 2211 122345689999999999999999999999999999999999999964321 1111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR-DVV 851 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 851 (869)
.+. .+.....++.+++.+||+.||++||++. ++.
T Consensus 212 ----~~~------------------~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 212 ----TPH------------------YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred ----CCC------------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 000 0001234577999999999999999985 554
No 142
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.7e-36 Score=315.84 Aligned_cols=262 Identities=22% Similarity=0.363 Sum_probs=209.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|++|.||+|....+|+.||+|.++.. .....+.+.+|++++++++|++++++++++... +.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 5799999999999999999999989999999988632 233356789999999999999999999987543 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++...... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 89999999999999998753221 22489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||.... ....+.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~ 220 (267)
T cd08224 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKI 220 (267)
T ss_pred eeeeccCCC--------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhh
Confidence 987654322 11123457889999999988889999999999999999999999986422 1111111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
..... .....+..+..+.+++.+||+.+|++|||+.+|++.++.+.
T Consensus 221 ~~~~~----------------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 221 EKCDY----------------------PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hcCCC----------------------CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00000 00011134557889999999999999999999999998875
No 143
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.3e-36 Score=327.67 Aligned_cols=238 Identities=27% Similarity=0.328 Sum_probs=188.0
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHH-HHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECE-ALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++.. .+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~-----~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----ADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-----CCEEEEEE
Confidence 47999999999999999999999999996432 222344555554 4678899999999998654 37889999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999997654 388999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~ 213 (323)
T cd05575 147 IEHS--------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILNKPL 213 (323)
T ss_pred ccCC--------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCCC
Confidence 2211 22234568999999999999899999999999999999999999996421 1111111111100
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
. .....+..+.+++.+|++.||++||++.
T Consensus 214 ~------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 R------------------------LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred C------------------------CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0 0011245678999999999999999985
No 144
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=321.59 Aligned_cols=264 Identities=22% Similarity=0.374 Sum_probs=211.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+...+.++||+|-||.|.++... .+..||||.++.... .....|.+|+++|.+++||||++++|+|... +..+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D-----ePic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD-----DPLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC-----CchH
Confidence 45678899999999999999985 569999999986554 3458899999999999999999999999865 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+++|||++|+|.+|+...... ....+...+|+.|||.||+||.+. ++||||+.+.|+|++.++++||+|||++
T Consensus 612 mI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 999999999999999987542 135566778999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc--CCCCCCcCccCCchHHHhhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS--RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t--g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+-+-..+. .......+-..+|||||.+.-++++.++|||+||+++||+++ ...||.....++ ..+-....
T Consensus 685 R~lysg~y------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~ 756 (807)
T KOG1094|consen 685 RNLYSGDY------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEF 756 (807)
T ss_pred cccccCCc------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhh
Confidence 86544321 123334556789999999999999999999999999999876 788987654331 11111112
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.+..-...+ ...+.-|+..+++++.+||+.|.++|||++++...|.+.
T Consensus 757 ~~~~~~~~~-------------------l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 757 FRDQGRQVV-------------------LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCCccee-------------------ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111111111 112335778899999999999999999999999888754
No 145
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.9e-36 Score=323.48 Aligned_cols=268 Identities=25% Similarity=0.382 Sum_probs=206.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeE--EEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGML--VAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+..++.. +|+|.++.. .......+.+|++++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~----- 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----- 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC-----
Confidence 35788999999999999999998777754 577776532 233456788999999999 899999999997543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
+..++||||+++|+|.++++...... ....+++.+++.++.|++.|++|||+. |++||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 67899999999999999997653211 112488999999999999999999999 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCc
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMF 777 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~ 777 (869)
+.++.+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred cCCCcEEeCccccCcccchh---------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 99999999999998632211 01111234678999999988889999999999999999998 999986432
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.. +...... ... . ...+...+..+.+++.+||+.+|++||+++++++.++++
T Consensus 229 ~~-----~~~~~~~-~~~----~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 229 CA-----ELYEKLP-QGY----R------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred hH-----HHHHHHh-cCC----c------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11 1111110 000 0 000012344678999999999999999999999999998
Q ss_pred HHhhhccc
Q 002897 858 REAFVSMQ 865 (869)
Q Consensus 858 ~~~~~~~~ 865 (869)
.+...+..
T Consensus 281 ~~~~~~~~ 288 (303)
T cd05088 281 LEERKTYV 288 (303)
T ss_pred HHhhhhhh
Confidence 77766544
No 146
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.8e-36 Score=319.48 Aligned_cols=274 Identities=25% Similarity=0.379 Sum_probs=204.8
Q ss_pred CCCCCCeeeeecceEEEEEEE----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGII----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
-|++.+.||+|+||.||.|.. ..++..||+|.++... ....+.+.+|+++++.++|||++++.+++... +..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence 468899999999999999984 3568899999986443 33456789999999999999999999987642 235
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||++ |++||||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 68999999999999999976532 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.++......... .......++..|+|||+..+..++.++|||||||++|||++++.|+...... .......
T Consensus 154 g~~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~ 225 (284)
T cd05079 154 GLTKAIETDKEYY-----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGP 225 (284)
T ss_pred ccccccccCccce-----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhccc
Confidence 9998765432110 1122345677899999998888999999999999999999988775432110 0000000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...+ ...+ ......... ...+.+..++..+.+++.+||+.+|++|||++|+++.++++
T Consensus 226 ~~~~---~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 226 THGQ---MTVT-RLVRVLEEG------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccc---ccHH-HHHHHHHcC------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000 0000 000000000 00011123456789999999999999999999999999876
No 147
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.2e-36 Score=321.00 Aligned_cols=265 Identities=25% Similarity=0.399 Sum_probs=205.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCe--EEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGM--LVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 629 (869)
++|++.+.||+|+||.||+|....++. .+++|.++.. .....+.+.+|+++++++ +||||+++++++... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR-----G 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----C
Confidence 578999999999999999999876664 4788888642 333456789999999999 799999999986543 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 699 (869)
..++||||+++|+|.+++....... ....+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 7899999999999999997643210 112488999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCcc
Q 002897 700 HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFH 778 (869)
Q Consensus 700 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~ 778 (869)
+++.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~ 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV---------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC 224 (297)
T ss_pred CCCeEEECCcCCCcccccee---------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999986432110 0111123567999999988889999999999999999997 9999864322
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
. ......... .. ...+..++..+.+++.+||+.+|.+|||++++++.|+.+.
T Consensus 225 ~-----~~~~~~~~~-~~----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 225 A-----ELYEKLPQG-YR----------------------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred H-----HHHHHHhcC-CC----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 111111100 00 0001123456889999999999999999999999999988
Q ss_pred Hhhhc
Q 002897 859 EAFVS 863 (869)
Q Consensus 859 ~~~~~ 863 (869)
.....
T Consensus 277 ~~~~~ 281 (297)
T cd05089 277 EARKA 281 (297)
T ss_pred Hhhcc
Confidence 76543
No 148
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-36 Score=332.77 Aligned_cols=204 Identities=23% Similarity=0.300 Sum_probs=172.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 628 (869)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999989999999998643 2334567889999999999999999999876432 2233
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 467999999965 67666643 278889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
||+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 167 fg~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 167 FGLARTACTN---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCCccccccC---------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9999754322 1223356899999999999999999999999999999999999999753
No 149
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=9.7e-37 Score=321.14 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=203.2
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCC-C
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNG-V 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 628 (869)
.+++.|++.+.||+|+||.||+|.+..+++.||+|++..... ....+..|+.+++++ +||||+++++++...+..+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 456789999999999999999999998999999999865432 346788999999998 7999999999987543222 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+|+||||+||++++++.++|+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 568999999999999999986432 2488999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
||++....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||......
T Consensus 155 fg~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~---- 222 (272)
T cd06637 155 FGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM---- 222 (272)
T ss_pred CCCceeccccc--------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----
Confidence 99997653321 1223456899999999875 335788999999999999999999998643211
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ...... .......++..+.+++.+||..+|.+|||+.|+++
T Consensus 223 ~~~~~-~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 223 RALFL-IPRNPA----------------------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHH-HhcCCC----------------------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 11000 000000 00001123456789999999999999999999975
No 150
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.2e-36 Score=322.09 Aligned_cols=266 Identities=25% Similarity=0.384 Sum_probs=206.2
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
...++|++.+.||+|+||.||+|.... ....+|+|.+.... ......+.+|+++++++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345679999999999999999999863 33789999986432 33446788999999999 899999999987543
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
...+++|||+++|+|.++++..... .....+++..++.++.|++.|++|||+. +|+||||||
T Consensus 89 -----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 89 -----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred -----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 6789999999999999999764311 1123589999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||.++.+...... .......++..|+|||+..+..++.++|||||||++||+++ |..|
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 234 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYY------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccce------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCC
Confidence 9999999999999999999866543210 11122235678999999988889999999999999999998 9999
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|..... .+.......... ...+..++..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~-----~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~ 286 (293)
T cd05053 235 YPGIPV-----EELFKLLKEGYR-----------------------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVE 286 (293)
T ss_pred CCCCCH-----HHHHHHHHcCCc-----------------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 864221 111111100000 0001123456889999999999999999999999
Q ss_pred HHHHHH
Q 002897 853 KLCAAR 858 (869)
Q Consensus 853 ~L~~~~ 858 (869)
.|+++.
T Consensus 287 ~l~~~~ 292 (293)
T cd05053 287 DLDRML 292 (293)
T ss_pred HHHHhh
Confidence 998874
No 151
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.8e-36 Score=315.58 Aligned_cols=251 Identities=25% Similarity=0.399 Sum_probs=198.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.+.||+|+||+||.|.+. .+..+|+|.+..... ..+.+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CCcEE
Confidence 46888999999999999999885 456799998864332 346789999999999999999999997543 56799
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... .+++..++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 9999999999999976543 389999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||+..+..++.++|||||||++|+|++ |+.||...... ........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~~ 216 (256)
T cd05113 149 YVLDDEY-------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVEKVSQ 216 (256)
T ss_pred ecCCCce-------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHhc
Confidence 6543221 11122345678999999988889999999999999999999 99998643211 11111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.... ..+...+..+.+++.+||+.+|++|||+.++++.+
T Consensus 217 ~~~~-----------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 217 GLRL-----------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCC-----------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 0000 00001245688999999999999999999999876
No 152
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.5e-36 Score=314.63 Aligned_cols=251 Identities=18% Similarity=0.264 Sum_probs=202.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+|++.++||+|+||.||++.+..+++.||+|.++.. .....+.+.+|+.+++.++||||+++.+++.+ ....++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEA-----DGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEE-----CCEEEE
Confidence 578899999999999999999999999999998643 23345678899999999999999999998654 378999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 9999999999999875432 2478999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||..... ..........
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~ 215 (255)
T cd08219 149 LLTSPG--------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQG 215 (255)
T ss_pred eecccc--------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcC
Confidence 654321 112235688999999999988899999999999999999999999974211 1111111110
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... ..+...+..+.+++.+||+.||++|||+.|++.+
T Consensus 216 ~~~-----------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 216 SYK-----------------------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCC-----------------------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000 0011234457899999999999999999999864
No 153
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.3e-36 Score=332.68 Aligned_cols=261 Identities=17% Similarity=0.241 Sum_probs=201.7
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeec
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSS 622 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 622 (869)
..++....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3444556689999999999999999999999999999999986422 2334567889999999999999999998654
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
....++||||+++|+|.+++.... +++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 115 -----~~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 115 -----DRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 378999999999999999997543 78889999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----CCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----EASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
.+||+|||++........ .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 180 ~ikL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~ 252 (371)
T cd05622 180 HLKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL 252 (371)
T ss_pred CEEEEeCCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH
Confidence 999999999986643211 122345699999999998653 378999999999999999999999974221
Q ss_pred CCchHHHhhhhhccc-ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPE-KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVVKL 854 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L 854 (869)
.......... ..... +.....+..+.+++..|+..+|.+ ||+++|+++..
T Consensus 253 -----~~~~~~i~~~~~~~~~---------------------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 253 -----VGTYSKIMNHKNSLTF---------------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred -----HHHHHHHHcCCCcccC---------------------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111111100 00000 001123456778999999844433 78999988753
No 154
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-36 Score=334.22 Aligned_cols=281 Identities=19% Similarity=0.248 Sum_probs=201.5
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.++||+|+||.||+|.+..+|+.||+|++... .....+++.+|+++++.++||||+++++++...+.......+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999889999999998543 223456788999999999999999999998765333334789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+. ++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 58888886543 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......++..|+|||++.+. .++.++||||+||++|||++|+.||...... ..........-
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g 222 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLG 222 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcC
Confidence 76543221 112234578999999998774 4789999999999999999999999753221 11111111000
Q ss_pred ccccccccC--ccchhhhhhcccccCC--CccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVD--PSLLLEVRANNSMSRG--GERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.....+... ................ .......+..+++.+++.+|++.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 0000000000000000 0000011234567899999999999999999999874
No 155
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.7e-36 Score=322.88 Aligned_cols=251 Identities=22% Similarity=0.293 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++... ...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CEEE
Confidence 36899999999999999999999889999999999765555557788999999999999999999987543 6889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++.... +++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EeecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987543 78999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......+++.|+|||...+..++.++|||||||++|++++|+.||............. .
T Consensus 163 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~-~---- 229 (297)
T cd06656 163 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-T---- 229 (297)
T ss_pred eEccCCc--------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec-c----
Confidence 7654332 11223458889999999998889999999999999999999999996432111000000 0
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ....+...+..+.+++.+||+.+|++||+++|+++
T Consensus 230 ~~~~---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 230 NGTP---------------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCC---------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00011233455778999999999999999999987
No 156
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.4e-36 Score=316.18 Aligned_cols=259 Identities=28% Similarity=0.470 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCe---EEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGM---LVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|+..+.||+|+||.||+|+...++. .+|+|.++.. .....+.+..|++++++++|||++++.+++...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF----- 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC-----
Confidence 3578889999999999999999875554 7999998644 233456788999999999999999999997543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 678999999999999999976543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.+.......... ........+..|+|||++.+..++.++|||||||++||+++ |+.||..... ..+.
T Consensus 151 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~ 220 (268)
T cd05063 151 FGLSRVLEDDPEGT-----YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVM 220 (268)
T ss_pred Cccceecccccccc-----eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHH
Confidence 99997664332110 11111223567999999988889999999999999999997 9999864321 1111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
....... ..+...+++..+.+++.+||+.+|++||++.+|++.|.++
T Consensus 221 ~~i~~~~-----------------------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 221 KAINDGF-----------------------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHhcCC-----------------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111000 0001113456788999999999999999999999999875
No 157
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=8.4e-37 Score=329.53 Aligned_cols=243 Identities=26% Similarity=0.313 Sum_probs=189.3
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHH-HHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECE-ALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++.. .+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----ADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-----CCeEEEEE
Confidence 47999999999999999899999999996432 122234444444 5678899999999998654 37789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 9999999999997654 378889999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~ 213 (325)
T cd05602 147 IEHN--------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILNKPL 213 (325)
T ss_pred ccCC--------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHhCCc
Confidence 2211 223345699999999999998999999999999999999999999964221 111111111000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. . ....+..+.+++.+|++.||.+||++.+.+..
T Consensus 214 ~--~----------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 214 Q--L----------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred C--C----------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 0 0 01234457799999999999999998754433
No 158
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.3e-36 Score=312.74 Aligned_cols=250 Identities=26% Similarity=0.390 Sum_probs=195.4
Q ss_pred eeeeecceEEEEEEEC--CCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeec
Q 002897 561 MVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
.||+|+||.||+|.+. ..+..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999774 4566799999865432 334678999999999999999999998642 457999999
Q ss_pred ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCC
Q 002897 638 MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 638 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 717 (869)
+++|+|.+++..... .+++..++.++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 76 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999976443 389999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 718 RPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 718 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
..... .......++..|+|||++.+..++.++|||||||++||+++ |..||...... .+........
T Consensus 148 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~-- 215 (257)
T cd05115 148 DDSYY-----KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----EVMSFIEQGK-- 215 (257)
T ss_pred Cccce-----eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHHHHCCC--
Confidence 32110 11111223578999999988889999999999999999996 99998753221 1111110000
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
....+..++.++.+++.+||+.+|++||++.+|.+.|+.+
T Consensus 216 ---------------------~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 ---------------------RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0001113456788999999999999999999999999865
No 159
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.7e-36 Score=316.12 Aligned_cols=254 Identities=21% Similarity=0.322 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+.|.+.+.||+|++|.||.|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD-----D 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc-----C
Confidence 46899999999999999999998899999999986432 1234578899999999999999999999654 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 68999999999999999998654 378999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.++........ ........|+..|+|||+..+..++.++||||+|+++||+++|+.||..... ......
T Consensus 148 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~ 218 (263)
T cd06625 148 FGASKRLQTICSS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFK 218 (263)
T ss_pred cccceeccccccc-----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHH
Confidence 9999765432110 0111234578899999999998899999999999999999999999864211 111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... . ....+..+...+.+++.+||+.+|++|||+.|+++.
T Consensus 219 ~~~~~-~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 IATQP-T----------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HhccC-C----------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00000 0 000111344567899999999999999999999864
No 160
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=323.90 Aligned_cols=253 Identities=23% Similarity=0.293 Sum_probs=211.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEALRSIR-HRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 627 (869)
....|++.+.||+|.||.||+|+.+.+|+.+|+|++.+... .....+.+|+.+|+++. |||||.+.+++.+.
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~---- 108 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP---- 108 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC----
Confidence 44678999999999999999999999999999999965432 23468899999999998 99999999996654
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC----Cc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD----MV 703 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 703 (869)
...++|||+++||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+|+... +.
T Consensus 109 -~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 109 -DSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred -CeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 7899999999999999999876 189999999999999999999999 99999999999999643 47
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
+|++|||+|...... ......+||+.|+|||++....|+.++||||+||++|.|++|.+||..........
T Consensus 178 ik~~DFGla~~~~~~---------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~ 248 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPG---------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL 248 (382)
T ss_pred EEEeeCCCceEccCC---------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH
Confidence 999999999877652 34556789999999999999999999999999999999999999998644332221
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
......+ + ...+..+.....+.+++..|+..||.+|+|+.++++.
T Consensus 249 -~i~~~~~-----~-------------------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 -AILRGDF-----D-------------------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred -HHHcCCC-----C-------------------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111111 0 1122333556678899999999999999999999984
No 161
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=358.58 Aligned_cols=437 Identities=29% Similarity=0.399 Sum_probs=330.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
||+++|++. +.|..+ +.+.+|+.|+++.|.|. ..|.+.+++.+|++|.|.+|++. .+|..+..+++|++|++|.|+
T Consensus 50 l~lsnn~~~-~fp~~i-t~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~ 125 (1081)
T KOG0618|consen 50 LDLSNNQIS-SFPIQI-TLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNH 125 (1081)
T ss_pred eeccccccc-cCCchh-hhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhc
Confidence 566666666 677666 35666777777777766 56666666677777777777666 666667777777777777777
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
+. .+|..+..++.++++..++|.....++ ... ++.+++..|.+.+.++..+..++. .|+|++|.++ .-
T Consensus 126 f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg-----~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~ 193 (1081)
T KOG0618|consen 126 FG-PIPLVIEVLTAEEELAASNNEKIQRLG-----QTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VL 193 (1081)
T ss_pred cC-CCchhHHhhhHHHHHhhhcchhhhhhc-----ccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hh
Confidence 66 566666666666777777662211222 122 677777777777777767766666 6889888876 23
Q ss_pred CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCcc
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPG 241 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 241 (869)
.+..+.+|+.|....|++..+.. ..++|+.|+.++|.++...+. ..+..|+.+|+++|.++ .+|++
T Consensus 194 dls~~~~l~~l~c~rn~ls~l~~----------~g~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~-~lp~w 259 (1081)
T KOG0618|consen 194 DLSNLANLEVLHCERNQLSELEI----------SGPSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNLS-NLPEW 259 (1081)
T ss_pred hhhhccchhhhhhhhcccceEEe----------cCcchheeeeccCcceeeccc---cccccceeeecchhhhh-cchHH
Confidence 56677888888888888877654 346888899999988844432 23345899999999998 56789
Q ss_pred ccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCc-cCccc-
Q 002897 242 LGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSL-GNCTS- 319 (869)
Q Consensus 242 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~- 319 (869)
++.+.+|+.|...+|++. .+|..+..+++|+.|.+.+|.+. .+|....+++.|++|+|..|+|. .+|+.+ .-+..
T Consensus 260 i~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~ 336 (1081)
T KOG0618|consen 260 IGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNAS 336 (1081)
T ss_pred HHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHH
Confidence 999999999999999995 78888888899999999999998 77888888999999999999998 555533 33333
Q ss_pred cceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEee
Q 002897 320 LIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQ 399 (869)
Q Consensus 320 L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 399 (869)
|+.|+.+.|++. ..|..-......++.|.+.+|.++...-..+.+..+|+.|+|++|+|.......+.++..|++|+||
T Consensus 337 l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LS 415 (1081)
T KOG0618|consen 337 LNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLS 415 (1081)
T ss_pred HHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcc
Confidence 788888888887 5554334455667789999999988766778888999999999999984444567889999999999
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCccc-CCCCCccCCCccccccCCccc
Q 002897 400 DNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGE-VPKKGVFSNKTRFSLSGNGKL 475 (869)
Q Consensus 400 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~-~~~~~~~~~~~~~~~~~n~~~ 475 (869)
+|+|+ .+|..+..++.|++|...+|+|. ..| .+.+++.|+.+|+|.|+|+.. +|.....++++.++++||.|.
T Consensus 416 GNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 416 GNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred cchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 99998 88899999999999999999998 677 888999999999999998754 344444578899999999874
No 162
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.1e-36 Score=319.04 Aligned_cols=261 Identities=23% Similarity=0.416 Sum_probs=202.1
Q ss_pred cCCCCCCeeeeecceEEEEEEEC----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|++.+.||+|+||.||+|... ..+..||+|.+.... ......+.+|++++++++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE----- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC-----
Confidence 46888899999999999999852 456889999986433 33446788999999999999999999986543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCc-----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDK-----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
...++||||+++++|.+++...... .....+++.++..++.|++.||+|||++ +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 6789999999999999998643211 0112478999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY------RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred EcCCCcEEeccccccccccCCcce------ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999866433210 11223345778999999988889999999999999999998 99998642
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.. ............. ..++.++..+.+++.+||+.||++||++.+|.+.|++
T Consensus 231 ~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 231 SN-----QEVIEMVRKRQLL-----------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CH-----HHHHHHHHcCCcC-----------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 21 1111111110000 0011234567899999999999999999999998864
No 163
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.5e-36 Score=313.80 Aligned_cols=255 Identities=31% Similarity=0.455 Sum_probs=202.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|++|.||+|.+. +++.||+|.++.... ..+.+.+|++++++++||||+++++++... +..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecC-----CCee
Confidence 457899999999999999999985 667899999865432 346788999999999999999999986543 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAG----RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeecccCCcHHHHHhccCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 99999999999999976541 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ ........+..|+|||+..+..++.++||||||+++|||++ |+.||...... .......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~ 218 (261)
T cd05068 151 RVIKEDIY-------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVLQQVD 218 (261)
T ss_pred EEccCCcc-------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHH
Confidence 87653211 11112223468999999998899999999999999999999 99998653211 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.. .. ...+..++..+.+++.+|++.+|++||++.++++.|+.
T Consensus 219 ~~-~~----------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 219 QG-YR----------------------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred cC-CC----------------------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 00 00 00011234568899999999999999999999999875
No 164
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.5e-36 Score=326.81 Aligned_cols=242 Identities=23% Similarity=0.319 Sum_probs=192.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 630 (869)
+|+..+.||+|+||+||+|.+..+|+.||+|++... .....+.+..|..+++.+. |++|+++.+++.. .+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT-----VDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec-----CCE
Confidence 477889999999999999999999999999999743 2334456788999998885 5677788887544 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 999999999999999997654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i 213 (323)
T cd05615 147 MCKEHMVDG--------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQSI 213 (323)
T ss_pred cccccCCCC--------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHH
Confidence 987543221 1223356899999999999889999999999999999999999999753211 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
..... ..+...+..+.+++.+|++.+|++|+++
T Consensus 214 ~~~~~------------------------~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 214 MEHNV------------------------SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HhCCC------------------------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 11000 0011233457799999999999999985
No 165
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-36 Score=328.27 Aligned_cols=268 Identities=23% Similarity=0.353 Sum_probs=204.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++... ......+.+|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 46899999999999999999985 2467899999996533 23446788999999999 689999999987543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc---------------------------------------------------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL--------------------------------------------------- 654 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 654 (869)
....++||||+++|+|.+++.......
T Consensus 84 --~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 84 --GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred --CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 256789999999999999987542100
Q ss_pred ----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCcc
Q 002897 655 ----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVV 724 (869)
Q Consensus 655 ----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 724 (869)
....+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 012368889999999999999999999 9999999999999999999999999999765332210
Q ss_pred ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccccccCccc
Q 002897 725 ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSL 803 (869)
Q Consensus 725 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 803 (869)
.......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ...........
T Consensus 236 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~~~~~~~~-------- 300 (343)
T cd05103 236 ---VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EFCRRLKEGTR-------- 300 (343)
T ss_pred ---hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HHHHHHhccCC--------
Confidence 11122345678999999988889999999999999999997 999986432111 11111100000
Q ss_pred hhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 804 LLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
...+......+.+++..||+.||++|||+.||++.|+.+.++
T Consensus 301 ---------------~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 301 ---------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ---------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 000001234578999999999999999999999999988764
No 166
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.8e-36 Score=320.09 Aligned_cols=270 Identities=20% Similarity=0.279 Sum_probs=208.3
Q ss_pred ccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeec
Q 002897 544 ISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSS 622 (869)
Q Consensus 544 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 622 (869)
+.++.+..+.++|++.+.||+|+||.||+|.+..+++.+|+|+++... .....+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344556667889999999999999999999999899999999886432 2235678899999999 79999999998865
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
.+..+....++||||+++++|.+++...... ...+++..+..++.|+++|+.|||+. +++||||||+||+++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4445557899999999999999988643211 12488999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
.++|+|||.+....... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 162 ~~kl~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred CEEEccCCceeecccCC--------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 99999999997654321 11223458999999998753 447889999999999999999999986432
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. ....... ........++ ..+...+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~----~~~~~~~-~~~~~~~~~~---------------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 234 PM----RALFKIP-RNPPPTLHQP---------------------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hh----HHHhhcc-ccCCCcccCC---------------------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11 1111000 0000000000 1123457899999999999999999999875
No 167
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.5e-36 Score=312.92 Aligned_cols=248 Identities=27% Similarity=0.398 Sum_probs=195.3
Q ss_pred eeeeecceEEEEEEE--CCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 561 MVGQGSFGTVFKGII--GENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
.||+|+||.||+|.+ ..++..+|+|+++... ....+.+.+|+.+++.++||||+++++++.. +..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 689999999999965 4568899999986433 2345678999999999999999999998642 45689999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999997654 389999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
...... .......++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.........
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~i~~~~~ 216 (257)
T cd05116 147 ADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----EVTQMIESGER 216 (257)
T ss_pred CCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHCCCC
Confidence 432110 11122234678999999988889999999999999999998 99998753221 11111110000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
...+..++..+.+++.+||+.||++||++.+|.+.|+.
T Consensus 217 -----------------------~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 -----------------------MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 00111244568899999999999999999999999875
No 168
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3e-36 Score=325.14 Aligned_cols=243 Identities=22% Similarity=0.333 Sum_probs=191.2
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|+.++.++ +||+|+++++++.. ....++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT-----TSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-----CCEEEEEE
Confidence 4799999999999999999999999999753 233456688999999888 69999999998654 37799999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999887654 389999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC-chHHHhh-hhhccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG-LTLHEFS-KMVLPE 793 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~-~~~~~~~-~~~~~~ 793 (869)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... ......
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 218 (327)
T cd05617 147 LGPG--------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK 218 (327)
T ss_pred cCCC--------CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC
Confidence 2211 12234568999999999999999999999999999999999999996432211 1111111 111000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
.. ..+...+..+.+++.+||+.||++||++.
T Consensus 219 ~~------------------------~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 219 PI------------------------RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CC------------------------CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 00 00112334567999999999999999853
No 169
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.4e-36 Score=314.63 Aligned_cols=255 Identities=27% Similarity=0.437 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|++..+ ..||+|+++.... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcE
Confidence 35799999999999999999998644 5699999864332 23578899999999999999999987532 4578
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..+..++.|+++||+|+|+. +++||||||+||++++++.++|+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 99999999999999976432 2378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||+..+..++.++|||||||++|+|+| |..||...... .......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----~~~~~~~ 217 (262)
T cd05071 150 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVE 217 (262)
T ss_pred eecccccc-------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----HHHHHHh
Confidence 76644321 11123346778999999988889999999999999999999 88888643211 1111100
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.. . ......+++..+.+++.+|++.+|++||+++++++.|+..
T Consensus 218 ~~-~----------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 218 RG-Y----------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred cC-C----------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00 0 0001123556788999999999999999999999998864
No 170
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-36 Score=331.53 Aligned_cols=204 Identities=22% Similarity=0.283 Sum_probs=173.1
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNG 627 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 627 (869)
...++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999999889999999998643 2334567789999999999999999999876432 233
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++||||+++ ++.+++.. .+++..+..++.|+++||+|||++ ||+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3567999999965 67777653 278899999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
|||+++..... .......||..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 162 Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 162 DFGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred eCcccccCCCc---------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999765332 112335689999999999998999999999999999999999999975
No 171
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.1e-36 Score=318.84 Aligned_cols=251 Identities=22% Similarity=0.331 Sum_probs=199.8
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++|||++++++++... ...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEEEE
Confidence 67788999999999999999989999999999765555667889999999999999999999987643 6789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++++|..++..... ++++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 82 e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 82 EFCAGGAVDAVMLELER-----PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 99999999998875432 489999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.... .......|+..|+|||++. +..++.++|||||||++|||++|+.||....... .........
T Consensus 154 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~ 224 (282)
T cd06643 154 TRTI--------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSE 224 (282)
T ss_pred cccc--------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcC
Confidence 3321 1223346889999999874 3457889999999999999999999986532111 111110000
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... ..+..++..+.+++.+||+.||++||+++++++.
T Consensus 225 ----~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 225 ----PPTL---------------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ----CCCC---------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0011234567899999999999999999998753
No 172
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4e-36 Score=317.29 Aligned_cols=250 Identities=23% Similarity=0.344 Sum_probs=198.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.++||+|+||.||+|.+..+++.||+|++... .......+.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEEE
Confidence 3688899999999999999999889999999998644 233446788999999999999999999997654 6788
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999997652 267889999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch--HHHhhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT--LHEFSKMV 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~--~~~~~~~~ 790 (869)
...... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||......... ........
T Consensus 143 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 212 (279)
T cd06619 143 TQLVNS----------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCI 212 (279)
T ss_pred eecccc----------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHH
Confidence 765332 122346899999999999888999999999999999999999999753222111 00111100
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .+. ......+.++.+++.+|++.+|++||+++|+++.
T Consensus 213 ~~~~-----~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 213 VDED-----PPV-----------------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred hccC-----CCC-----------------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000 000 0001233467899999999999999999999875
No 173
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-36 Score=321.71 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||.|++|.||+|.+..+|+.||+|.+........+.+.+|+.+++.++|||++++++++.. ....++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV-----GDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec-----CceEEE
Confidence 468899999999999999999988999999999976555556788999999999999999999998754 378999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|+||+++++|.+++.... +++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTETC-------MDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999987542 89999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......|+..|+|||.+.+..++.++|||||||++|++++|+.||...... ....... ..
T Consensus 164 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~~~~-~~ 230 (296)
T cd06655 164 QITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALYLIA-TN 230 (296)
T ss_pred hccccc--------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-hc
Confidence 654322 1122345889999999999888999999999999999999999999653221 1110000 00
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ...+..++..+.+++.+||..||++|||+.+++.
T Consensus 231 ~~~~---------------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 231 GTPE---------------------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred CCcc---------------------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000 0011133456789999999999999999999986
No 174
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.5e-36 Score=317.44 Aligned_cols=261 Identities=25% Similarity=0.374 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|++|.||+|.+.. .+..||+|.+.... ......+.+|+.+++.++|+||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC---
Confidence 4679999999999999999999976 67889999886433 33346789999999999999999999986543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL-EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM--- 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 702 (869)
...++||||+++++|.+++....... ....+++..+..++.||+.|++|||+. +++||||||+||+++.++
T Consensus 82 --~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~ 156 (277)
T cd05036 82 --LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGR 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCc
Confidence 56789999999999999998764321 123489999999999999999999999 999999999999998765
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~ 781 (869)
.+||+|||.++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-- 228 (277)
T cd05036 157 VAKIADFGMARDIYRASYY------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-- 228 (277)
T ss_pred ceEeccCccccccCCccce------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 6999999999866332110 11112234568999999998899999999999999999997 99998753221
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
........... ...+..++..+.+++.+|++.+|++|||+.||++.|.
T Consensus 229 ---~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 ---EVMEFVTGGGR-----------------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ---HHHHHHHcCCc-----------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11111110000 0001123456889999999999999999999999875
No 175
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.2e-36 Score=321.34 Aligned_cols=260 Identities=23% Similarity=0.384 Sum_probs=203.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
.++|.+.+.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG-- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--
Confidence 45799999999999999999985 2356689999986543 33446789999999999 799999999987543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++
T Consensus 112 ---~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 112 ---GPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ---CceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 678999999999999999976442 1379999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLH 784 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~ 784 (869)
++|||.++........ .......++..|+|||.+.+..++.++||||+||++|||++ |..||....... ...
T Consensus 182 l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~ 254 (302)
T cd05055 182 ICDFGLARDIMNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFY 254 (302)
T ss_pred ECCCcccccccCCCce------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHH
Confidence 9999999765433210 11122346788999999998899999999999999999998 999986532211 111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.... .. .. ...+...+..+.+++.+|++.+|++|||+.|+++.|+++
T Consensus 255 ~~~~---~~-~~----------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 255 KLIK---EG-YR----------------------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHH---cC-Cc----------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1100 00 00 000011234688999999999999999999999999875
No 176
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.7e-36 Score=312.70 Aligned_cols=250 Identities=30% Similarity=0.407 Sum_probs=199.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||+|+||.||+|.. .|..||+|.++... ..+.+.+|+.++++++|+|++++++++.. .....++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEc----CCCceEE
Confidence 4788999999999999999987 58889999985432 34678899999999999999999997543 2356899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.++++.... ..+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred EEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 9999999999999986543 2378999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... ....++..|+|||+..+..++.++|||||||++|+|++ |+.||.... ..........
T Consensus 151 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~~ 214 (256)
T cd05082 151 EASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEK 214 (256)
T ss_pred eccccC-----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhc
Confidence 543221 12234568999999988889999999999999999997 999986421 1111111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.... .....++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus 215 ~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 215 GYKM-----------------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCC-----------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0000 00113456788999999999999999999999988753
No 177
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.9e-36 Score=312.14 Aligned_cols=251 Identities=25% Similarity=0.392 Sum_probs=198.0
Q ss_pred CeeeeecceEEEEEEECCCC---eEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENG---MLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|.+...+ ..||+|.+..... ...+.+.+|+.+++.++||||+++++++.. +..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 47999999999999875444 7899999864433 345678999999999999999999998642 4579999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999998765 389999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
....... .......++..|+|||...+..++.++|||||||++|++++ |..||..... .......... .
T Consensus 146 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~---~ 215 (257)
T cd05060 146 GAGSDYY-----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESG---E 215 (257)
T ss_pred ecCCccc-----ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcC---C
Confidence 4432110 11112224568999999998899999999999999999998 9999865321 1111111110 0
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
. .+.+..++..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 216 ~-----------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 216 R-----------------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred c-----------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 0011134456889999999999999999999999998763
No 178
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.9e-36 Score=326.71 Aligned_cols=242 Identities=26% Similarity=0.321 Sum_probs=189.4
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHH-HHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECE-ALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||+||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++.. .+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~-----~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT-----TEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-----CCEEEEEE
Confidence 46999999999999999999999999996432 223345555555 4677899999999988654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|..++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999987654 389999999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~~~ 213 (325)
T cd05604 147 IAQS--------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHKPL 213 (325)
T ss_pred CCCC--------CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcCCc
Confidence 2211 122345689999999999999999999999999999999999999964211 111111111100
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ...+..+.+++.+|++.+|.+||++.+.++
T Consensus 214 --~~~----------------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 214 --VLR----------------------PGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred --cCC----------------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 000 012345678999999999999999864433
No 179
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.1e-37 Score=329.19 Aligned_cols=239 Identities=26% Similarity=0.324 Sum_probs=190.6
Q ss_pred CeeeeecceEEEEEEE---CCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 560 NMVGQGSFGTVFKGII---GENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
+.||+|+||.||++++ ..+|+.||+|+++.... .....+..|++++++++||||+++++++.. ....++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT-----EGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCEEEEE
Confidence 6799999999999886 35789999999975332 233556789999999999999999998654 3788999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
|||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999997654 389999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 148 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~~~ 214 (318)
T cd05582 148 SIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILKAK 214 (318)
T ss_pred cCCCC--------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHcCC
Confidence 43321 122335689999999999988899999999999999999999999974321 11111111100
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
. ..+...+..+.+++.+||+.||++||++.+
T Consensus 215 ~------------------------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 L------------------------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred C------------------------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 0 000123456779999999999999999655
No 180
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=4.3e-36 Score=317.21 Aligned_cols=260 Identities=26% Similarity=0.438 Sum_probs=204.2
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|+..++||+|+||.||+|... .++..+|+|.+..........+.+|+++++.++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG----- 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC-----
Confidence 56888999999999999999742 35678999998766666667899999999999999999999987653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcc---------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKL---------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 699 (869)
...++||||+++|+|.+++....... ....+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 66899999999999999998654210 112488999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCcc
Q 002897 700 HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFH 778 (869)
Q Consensus 700 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~ 778 (869)
+++.+||+|||++......... .......+++.|+|||+..+..++.++|||||||++|||++ |+.||.....
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee------ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 9999999999999765432110 11223345788999999998899999999999999999998 8999864322
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
. .......... ....+..++..+.+++.+||+.||++||+++||++.|+
T Consensus 231 ~-----~~~~~~~~~~-----------------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 231 T-----EAIECITQGR-----------------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred H-----HHHHHHHcCc-----------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1 1111110000 00001134456789999999999999999999999886
No 181
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.4e-36 Score=314.79 Aligned_cols=260 Identities=27% Similarity=0.440 Sum_probs=203.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCe---EEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGM---LVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
++|++.+.||+|+||.||+|.+..+++ .||||.+... .......+..|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----SR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----CC
Confidence 457889999999999999999876654 6999998654 34445789999999999999999999998654 36
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++..... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 78999999999999999986543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+............ ........+..|+|||++.+..++.++|||||||++||+++ |..||...... .......
T Consensus 151 g~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~ 225 (269)
T cd05065 151 GLSRFLEDDTSDPTY---TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIE 225 (269)
T ss_pred ccccccccCcccccc---ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHH
Confidence 998766443211100 00011112457999999998899999999999999999887 99998643211 1111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
... ..+.+.+++..+.+++.+||+.+|++||++++|+..|+++
T Consensus 226 ~~~--------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 226 QDY--------------------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cCC--------------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0001123456688999999999999999999999998765
No 182
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.4e-36 Score=320.75 Aligned_cols=276 Identities=20% Similarity=0.283 Sum_probs=204.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.++||+|+||.||+|.+..++..+|+|.++... .....++.+|++++++++||||+++++++... +..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEEE
Confidence 36899999999999999999999899999999986542 33446688999999999999999999997643 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.++++... .+++..+..++.|+++||+|||+.. +++||||||+||+++.++.+||+|||.+
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 9999999999999998653 3889999999999999999999732 8999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ....+......
T Consensus 148 ~~~~~~----------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~ 215 (308)
T cd06615 148 GQLIDS----------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMFGRPVS 215 (308)
T ss_pred cccccc----------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhhcCccc
Confidence 754322 122346889999999998888999999999999999999999998643211 11111111000
Q ss_pred cccccc-----------cCccchhhhhhccc-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 793 EKVMEI-----------VDPSLLLEVRANNS-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 793 ~~~~~~-----------~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
..... .++........... .............+.++.+++.+||+.+|++|||++||++.-.
T Consensus 216 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 216 -EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred -cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 00000 00000000000000 0000000001124556889999999999999999999998643
No 183
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.9e-39 Score=338.29 Aligned_cols=380 Identities=24% Similarity=0.369 Sum_probs=252.6
Q ss_pred cccCCCccc-ccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 2 FDAQNNKLV-GDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 2 l~l~~~~~~-~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
.|+++|.+. +-.|.++- .++.+++|.|...++. .+|+.++.|.+|++|.+++|++. .+-+.++.|+.|+.+++.+|
T Consensus 12 vDfsgNDFsg~~FP~~v~-qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N 88 (1255)
T KOG0444|consen 12 VDFSGNDFSGDRFPHDVE-QMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDN 88 (1255)
T ss_pred ccccCCcCCCCcCchhHH-HhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhcc
Confidence 367777777 56777774 6777888888777777 77777888888888888888777 55566777777777777777
Q ss_pred ccCc-cCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccccc
Q 002897 81 QFSG-FIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 81 ~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
++.. -+|..+.++..|..||||+|++. .+|.. +..-+++-.|+|++|+|..++...|-+++.|-.||||+|++.. .
T Consensus 89 ~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~-LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~-L 165 (1255)
T KOG0444|consen 89 NLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTN-LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEM-L 165 (1255)
T ss_pred ccccCCCCchhcccccceeeecchhhhh-hcchh-hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhh-c
Confidence 7763 35666777777777777777776 55532 3344444444444444444333344444444444444444432 2
Q ss_pred CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccc-ccC
Q 002897 160 SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS-GTI 238 (869)
Q Consensus 160 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~-~~~ 238 (869)
|..+..+.+|++|.|++|.+..... ..+..+++ |+.|.+++.+-+ ..+
T Consensus 166 PPQ~RRL~~LqtL~Ls~NPL~hfQL------rQLPsmts-------------------------L~vLhms~TqRTl~N~ 214 (1255)
T KOG0444|consen 166 PPQIRRLSMLQTLKLSNNPLNHFQL------RQLPSMTS-------------------------LSVLHMSNTQRTLDNI 214 (1255)
T ss_pred CHHHHHHhhhhhhhcCCChhhHHHH------hcCccchh-------------------------hhhhhcccccchhhcC
Confidence 2234444444444444444432211 11223333 334444433211 245
Q ss_pred CccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcc
Q 002897 239 PPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCT 318 (869)
Q Consensus 239 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 318 (869)
|..+..+.+|..++++.|.+. .+|..+-.+++|+.|+|++|+|+ .+.-..+...+|++|+||.|+++ .+|++++.++
T Consensus 215 Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~ 291 (1255)
T KOG0444|consen 215 PTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLT 291 (1255)
T ss_pred CCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhH
Confidence 666777777777777777776 77777777888888888888887 45555666777888888888887 7888888888
Q ss_pred ccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEe
Q 002897 319 SLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKM 398 (869)
Q Consensus 319 ~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 398 (869)
+|+.|++.+|+++- . -+|+.++.+.+|+.+..++|.+. .+|+.++.|..|+.|.|
T Consensus 292 kL~kLy~n~NkL~F-----------------------e-GiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L 346 (1255)
T KOG0444|consen 292 KLTKLYANNNKLTF-----------------------E-GIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKL 346 (1255)
T ss_pred HHHHHHhccCcccc-----------------------c-CCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcc
Confidence 88888888888761 1 46788888888999999999888 88888999999999999
Q ss_pred eCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccc
Q 002897 399 QDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLS 447 (869)
Q Consensus 399 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 447 (869)
+.|++. .+|+++.-|+.|..|||..|.----.|.--..-++|+.-++.
T Consensus 347 ~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 347 DHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred ccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecc
Confidence 999887 788888888888888888886442444333333455554443
No 184
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=8.2e-36 Score=313.19 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=201.0
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+.+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|+.+++.++|+||+++++++... +
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN-----G 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-----C
Confidence 44556666778999999999999999889999999998766555667899999999999999999999987643 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNL--SLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl 706 (869)
..++|+||+++++|.+++..... ++ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l 150 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKI 150 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhcc-----cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEE
Confidence 78999999999999999986532 24 7888999999999999999999 9999999999999976 679999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
+|||.+....... .......|+..|+|||++.+.. ++.++||||||+++|+|++|+.||........ .
T Consensus 151 ~dfg~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~ 220 (268)
T cd06624 151 SDFGTSKRLAGIN--------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--A 220 (268)
T ss_pred ecchhheecccCC--------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--h
Confidence 9999987654321 1122335789999999986644 78899999999999999999999864221110 0
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+...... . . ...+......+.+++.+||+.+|++|||+.|+++
T Consensus 221 ~~~~~~~~--~----~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 221 MFKVGMFK--I----H------------------PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred Hhhhhhhc--c----C------------------CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00000000 0 0 0011134456789999999999999999999976
No 185
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.4e-36 Score=313.65 Aligned_cols=251 Identities=29% Similarity=0.453 Sum_probs=198.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||+|+||.||+|.+. ++..+|+|++..... ....+.+|+++++.++||||+++++++.. ....++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTK-----QRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcC-----CCceEE
Confidence 46889999999999999999986 677899999864322 23567889999999999999999998654 367899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 9999999999999976543 389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||...+..++.++||||||+++|++++ |+.||...... ........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~ 216 (256)
T cd05059 149 YVLDDQY-------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVVESVSA 216 (256)
T ss_pred ecccccc-------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHHHHHHc
Confidence 6543211 11112234568999999998899999999999999999999 89998643211 11111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
. ... ..+..++.++.+++.+||..+|++|||+.|+++.|
T Consensus 217 ~-----~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 217 G-----YRL------------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred C-----CcC------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0 000 00012455788999999999999999999999876
No 186
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.5e-36 Score=331.33 Aligned_cols=280 Identities=18% Similarity=0.198 Sum_probs=203.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 628 (869)
..++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++.... +...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999989999999998643 2334567889999999999999999999875432 2334
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++ ++.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 568999999965 78777753 278889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+++..... .......||..|+|||++.+..++.++|||||||++|+|++|+.||...... ........
T Consensus 170 fG~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~ 239 (364)
T cd07875 170 FGLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIE 239 (364)
T ss_pred CCCccccCCC---------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 9999765332 1123346899999999999999999999999999999999999999753221 11111111
Q ss_pred hhcc--cccccccCccchhhhhhcccc---------c---CCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLP--EKVMEIVDPSLLLEVRANNSM---------S---RGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~--~~~~~~~d~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... ......+.+............ . ..............+.+++.+|++.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 000000110000000000000 0 000000111123567899999999999999999999874
No 187
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.6e-36 Score=317.65 Aligned_cols=263 Identities=24% Similarity=0.349 Sum_probs=203.5
Q ss_pred CCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+|++.+.||+|+||.||+|+... ....+|+|.+.... ......+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD----- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----
Confidence 47888999999999999998742 33678999886433 23456788999999999999999999987543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKL------------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGD 690 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 690 (869)
+..++||||+.+|+|.+++....... ...++++..++.++.|++.|++|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 66899999999999999987543210 113488999999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-C
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-R 769 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g 769 (869)
|||+||++++++.+||+|||+++........ .......++..|+|||+..+..++.++||||||+++|||++ |
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g 226 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 226 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999765332210 11122345678999999988889999999999999999998 9
Q ss_pred CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
..||...... .......... ....+..++..+.+++.+||+.+|++||+++|
T Consensus 227 ~~p~~~~~~~--~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~ 278 (290)
T cd05045 227 GNPYPGIAPE--RLFNLLKTGY--------------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFAD 278 (290)
T ss_pred CCCCCCCCHH--HHHHHHhCCC--------------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 9998643211 1111111000 00011123456889999999999999999999
Q ss_pred HHHHHHHHHH
Q 002897 850 VVVKLCAARE 859 (869)
Q Consensus 850 vl~~L~~~~~ 859 (869)
+++.|+++..
T Consensus 279 i~~~l~~~~~ 288 (290)
T cd05045 279 ISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 188
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.7e-36 Score=317.55 Aligned_cols=275 Identities=26% Similarity=0.400 Sum_probs=208.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECC----CCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGE----NGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|++.+.||+|+||.||+|++.. ++..||||+++..... ..+.+.+|+++++.++||||+++++++... +.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 467888999999999999999643 4789999999755443 467899999999999999999999987542 34
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 678999999999999999987653 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+.......... .......++..|+|||...+..++.++||||||+++|||++|+.|+......... +..
T Consensus 153 fg~~~~~~~~~~~~-----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~ 224 (284)
T cd05038 153 FGLAKVLPEDKDYY-----YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIG 224 (284)
T ss_pred cccccccccCCcce-----eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccc
Confidence 99998765332110 1111233566799999998888999999999999999999999998653222111 000
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...... ....+...... ......+..++.++.+++.+||+.+|++||||.||+++|+++
T Consensus 225 ~~~~~~----~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 225 IAQGQM----IVTRLLELLKE------GERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccccc----cHHHHHHHHHc------CCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000000 00000000000 001111223456789999999999999999999999999876
No 189
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.7e-36 Score=324.19 Aligned_cols=281 Identities=17% Similarity=0.155 Sum_probs=198.4
Q ss_pred CCCeeeee--cceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 558 SSNMVGQG--SFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 558 ~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+.++||+| +|++||++.++.+|+.||+|+++... ....+.+.+|+++++.++||||+++++++... +..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 45789999 67899999999999999999996432 33446678899999999999999999997654 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM----DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 9999999999999976432 1389999999999999999999999 99999999999999999999999998765
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
.......... ..........++..|+|||++.+ ..++.++|||||||++|||++|+.||............ .....
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~ 227 (327)
T cd08227 150 SMINHGQRLR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTV 227 (327)
T ss_pred cccccccccc-ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCc
Confidence 4322111000 00011223456788999999876 35899999999999999999999999753322111111 11000
Q ss_pred ccccc---------------cccCccchhhhhhc---ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVM---------------EIVDPSLLLEVRAN---NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~---------------~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.... ...+.......... .........+........+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 228 PCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred cccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000 00000000000000 000000001112234567899999999999999999999987
No 190
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.9e-36 Score=330.79 Aligned_cols=266 Identities=23% Similarity=0.332 Sum_probs=205.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCC-CCccceEEEEeeccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIR-HRNLIKIITICSSID 624 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 624 (869)
..++|.+.++||+|+||.||+|++. ..++.||+|+++... ....+.+.+|++++.++. ||||+++++++...
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~- 113 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG- 113 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC-
Confidence 3457888999999999999999964 345789999997543 233457889999999997 99999999997653
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCc---------------------------------------------------
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDK--------------------------------------------------- 653 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 653 (869)
...++||||+++|+|.++++.....
T Consensus 114 ----~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 114 ----GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred ----CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 6789999999999999999764321
Q ss_pred -----------------------------------------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 654 -----------------------------------------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 654 -----------------------------------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
.....+++..++.++.|++.||+|||+. +++|||||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlk 266 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLA 266 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCC
Confidence 0112467888999999999999999999 99999999
Q ss_pred CCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCC
Q 002897 693 PSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRR 771 (869)
Q Consensus 693 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~ 771 (869)
|+||++++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~ 340 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGT 340 (401)
T ss_pred cceEEEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999865332210 11122356788999999988889999999999999999998 889
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||........ ......... . ...+..++..+.+++.+||..+|++||+++||+
T Consensus 341 P~~~~~~~~~----~~~~~~~~~-----~------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 341 PYPELPMNEQ----FYNAIKRGY-----R------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred CCCCCCchHH----HHHHHHcCC-----C------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 9864321111 111110000 0 000112345688999999999999999999999
Q ss_pred HHHHHHH
Q 002897 852 VKLCAAR 858 (869)
Q Consensus 852 ~~L~~~~ 858 (869)
+.|+++.
T Consensus 394 ~~L~~~~ 400 (401)
T cd05107 394 HLVGDLL 400 (401)
T ss_pred HHHHHHh
Confidence 9998864
No 191
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.6e-36 Score=341.37 Aligned_cols=204 Identities=22% Similarity=0.343 Sum_probs=168.0
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCC------CccceEEEEe
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRH------RNLIKIITIC 620 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~ 620 (869)
.++....++|++.++||+|+||+||+|.+..+++.||||+++... ........|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344455788999999999999999999999899999999996432 223455677777777754 4588888886
Q ss_pred eccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeec
Q 002897 621 SSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 621 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~ 699 (869)
... ..+.++|||++ +++|.+++.... .+++..+..++.||+.||+|||+ . +||||||||+|||++
T Consensus 201 ~~~----~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 QNE----TGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred EcC----CceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 532 35789999988 778999887654 38999999999999999999997 5 899999999999998
Q ss_pred CCC----------------cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHH
Q 002897 700 HDM----------------VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILL 763 (869)
Q Consensus 700 ~~~----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il 763 (869)
.++ .+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 335 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCc-----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHH
Confidence 765 49999999875322 122345789999999999999999999999999999
Q ss_pred HHHHcCCCCCCcC
Q 002897 764 LEMFSRRRPTDSM 776 (869)
Q Consensus 764 ~el~tg~~pf~~~ 776 (869)
|||++|+.||+..
T Consensus 336 ~elltG~~pf~~~ 348 (467)
T PTZ00284 336 YELYTGKLLYDTH 348 (467)
T ss_pred HHHHhCCCCCCCC
Confidence 9999999999753
No 192
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-36 Score=319.65 Aligned_cols=261 Identities=22% Similarity=0.362 Sum_probs=202.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
.+|.+.+.||+|+||.||+|.+.. .+..||+|+++..... ..+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~---- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE---- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC----
Confidence 357778899999999999998753 3578999999754332 346688999999999999999999997543
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
...++++||+++++|.+++...... .....+++..+..++.|++.||+|+|++ +|+||||||+||+
T Consensus 81 -~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 81 -QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 6689999999999999998643211 0123478899999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
+++++.+||+|||+++........ .......+++.|+|||++.++.++.++|||||||++|||++ |..||...
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 230 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYY------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 230 (283)
T ss_pred ecCCCceEecccccccccccchhe------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999998765432210 11223346789999999988889999999999999999998 88887642
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.. ..+.......... ..+.+++..+.+++.+||+.+|++||+++||++.|+.
T Consensus 231 ~~-----~~~~~~i~~~~~~-----------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 231 SN-----QDVIEMIRNRQVL-----------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CH-----HHHHHHHHcCCcC-----------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 21 1111111111100 0112355668899999999999999999999998864
No 193
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.2e-36 Score=313.20 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=205.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.+.||.|+||.||+|.+..+++.+|+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR-----RDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe-----CCEEEE
Confidence 578899999999999999999988899999999986665567889999999999999999999998654 367899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
+|||+++++|.+++..... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999887532 389999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCC---CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS---EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
...... .......++..|+|||...+. .++.++|||||||++|+|++|+.||........ ........
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~ 220 (262)
T cd06613 150 QLTATI--------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSN 220 (262)
T ss_pred hhhhhh--------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcc
Confidence 654321 112234578899999998776 789999999999999999999999865321110 00000000
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...+. .......+.++.+++.+||+.+|.+|||+.||+.
T Consensus 221 -------~~~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 221 -------FPPPK----------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -------CCCcc----------------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0111234567889999999999999999999975
No 194
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.3e-36 Score=312.04 Aligned_cols=254 Identities=26% Similarity=0.454 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|.+. ++..||+|.++.... ..+.+.+|+.++++++|++++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcE
Confidence 357899999999999999999886 677899999865333 23678999999999999999999988632 4578
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 99999999999999976432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||+..+..++.++||||||+++|+|++ |..||...... +......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~~~ 217 (260)
T cd05070 150 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-----EVLEQVE 217 (260)
T ss_pred eeccCccc-------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHH
Confidence 86544321 11112235678999999988889999999999999999999 88998643211 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
... ..+.+...+..+.+++.+|++.+|++|||++++.+.|+.
T Consensus 218 ~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 218 RGY-----------------------RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred cCC-----------------------CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 000 000112344568899999999999999999999988864
No 195
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.6e-36 Score=318.63 Aligned_cols=267 Identities=23% Similarity=0.368 Sum_probs=207.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC-------CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeec
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG-------ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSS 622 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 622 (869)
...+|.+.+.||+|+||.||+|+.. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3567899999999999999999752 245689999986432 33456789999999999 89999999998765
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
. ...++||||+++|+|.+++....... ....+++.++..++.||++||+|||++ |++|||||
T Consensus 93 ~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 93 D-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred C-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 3 67899999999999999998753211 122478899999999999999999999 99999999
Q ss_pred CCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCC
Q 002897 693 PSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRR 771 (869)
Q Consensus 693 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~ 771 (869)
|+||+++.++.+||+|||.++........ .......++..|+|||++.+..++.++||||||+++|++++ |..
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~ 238 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238 (304)
T ss_pred cceEEEcCCCcEEECCCccceeccccccc------ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999876443211 11222345678999999988889999999999999999998 788
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||.... ..++......... ...+..++..+.+++.+||+.+|++|||+.|++
T Consensus 239 p~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l 290 (304)
T cd05101 239 PYPGIP-----VEELFKLLKEGHR-----------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLV 290 (304)
T ss_pred CcccCC-----HHHHHHHHHcCCc-----------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 875421 1222211110000 001113456788999999999999999999999
Q ss_pred HHHHHHHHh
Q 002897 852 VKLCAAREA 860 (869)
Q Consensus 852 ~~L~~~~~~ 860 (869)
+.|+++..-
T Consensus 291 ~~l~~~~~~ 299 (304)
T cd05101 291 EDLDRILTL 299 (304)
T ss_pred HHHHHHHHh
Confidence 999988654
No 196
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.2e-36 Score=322.93 Aligned_cols=238 Identities=27% Similarity=0.323 Sum_probs=186.9
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHH-HHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECE-ALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|+||.||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++.+ .+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT-----AEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCEEEEEE
Confidence 47999999999999999899999999986432 222344555554 5788899999999988654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|..++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999999887643 378899999999999999999999 9999999999999999999999999998743
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......|++.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~ 213 (321)
T cd05603 147 VEPE--------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILHKPL 213 (321)
T ss_pred CCCC--------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhcCCC
Confidence 2211 12234568999999999998899999999999999999999999996431 1111111111100
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
. .+......+.+++.+|++.||++||++.
T Consensus 214 -~-----------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 -Q-----------------------LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -C-----------------------CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0 0012234577999999999999999864
No 197
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.7e-36 Score=328.57 Aligned_cols=279 Identities=19% Similarity=0.235 Sum_probs=200.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 628 (869)
..++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++..... ...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4578999999999999999999999899999999986432 2234567789999999999999999998754321 223
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...+++++++ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcC
Confidence 4578999988 77999888643 289999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||+++..... .....|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...... .....+.
T Consensus 162 fg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~ 229 (343)
T cd07878 162 FGLARQADDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIM 229 (343)
T ss_pred CccceecCCC-----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 9999765332 123468999999999876 46899999999999999999999999642211 1111111
Q ss_pred hhhc--ccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVL--PEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~--~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .......+.......+... ................+.+.+++.+|++.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 230 EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1100 0000000000000000000 0000000000001123457799999999999999999999964
No 198
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.7e-36 Score=313.12 Aligned_cols=259 Identities=26% Similarity=0.438 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC---eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG---MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..+|++.+.||+|+||.||+|++..++ ..+|+|.++... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK-----S 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----C
Confidence 357889999999999999999885443 479999886432 3345678999999999999999999998654 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCC
Confidence 678999999999999999986543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.+.......... .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... +..
T Consensus 150 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~~ 219 (267)
T cd05066 150 FGLSRVLEDDPEAA-----YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DVI 219 (267)
T ss_pred CCccccccccccee-----eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HHH
Confidence 99998765432100 11112233568999999998889999999999999999887 99998643211 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...... . . .+....++..+.+++.+|++.+|++||++.++++.|.++
T Consensus 220 ~~~~~~-~-~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 220 KAIEEG-Y-R---------------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHhCC-C-c---------------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111000 0 0 000112345678999999999999999999999999875
No 199
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.7e-36 Score=330.36 Aligned_cols=208 Identities=25% Similarity=0.336 Sum_probs=175.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+..|+.++..++||+|+++++++.+ .+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 36889999999999999999999999999999996432 3345678889999999999999999998654 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999997654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc---------------------------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHH
Q 002897 711 LAKFLPARPLDTVV---------------------------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILL 763 (869)
Q Consensus 711 ~a~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il 763 (869)
++............ ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98755322110000 000011235799999999999999999999999999999
Q ss_pred HHHHcCCCCCCc
Q 002897 764 LEMFSRRRPTDS 775 (869)
Q Consensus 764 ~el~tg~~pf~~ 775 (869)
|||++|+.||..
T Consensus 227 yel~tG~~Pf~~ 238 (360)
T cd05627 227 YEMLIGYPPFCS 238 (360)
T ss_pred eecccCCCCCCC
Confidence 999999999975
No 200
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.2e-36 Score=318.00 Aligned_cols=267 Identities=23% Similarity=0.373 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
..++|++.++||+|+||.||+|..+ ..+..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4678999999999999999999764 235689999886433 22335678899999999999999999986543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLE----VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
...++||||+++|+|.+++........ ....++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 82 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 82 ---QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred ---CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 678999999999999999976432111 12357788999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~ 780 (869)
+.++|+|||+++........ .......++..|+|||.+.++.++.++|||||||++|||++ |..||.....
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-- 227 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 227 (288)
T ss_pred CcEEECcCCccccccccccc------cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 99999999999765432210 11122345678999999998889999999999999999998 7888864221
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.+........... ..++.++..+.+++.+|++.||++|||+.|+++.+++....
T Consensus 228 ---~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 228 ---EQVLKFVMDGGYL-----------------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred ---HHHHHHHHcCCCC-----------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 1111111111000 00112345788999999999999999999999999876443
No 201
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.6e-36 Score=318.54 Aligned_cols=252 Identities=22% Similarity=0.320 Sum_probs=201.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+.|++.++||+|+||.||+|++..+++.||+|++........+.+.+|+.+++.++||||+++++++... ...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD-----GKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----CeEEE
Confidence 5689999999999999999999989999999999876666678889999999999999999999986543 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|..++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 87 v~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999988865433 389999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
...... .......++..|+|||++. ...++.++|||||||++|||++|+.||..... ......
T Consensus 159 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~ 226 (292)
T cd06644 159 KNVKTL--------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP----MRVLLK 226 (292)
T ss_pred eccccc--------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH----HHHHHH
Confidence 543221 1122345788999999874 34568899999999999999999999864221 111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... ..+..++..+.+++.+||+.+|++||+++|+++
T Consensus 227 -~~~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 227 -IAKSEPPTL---------------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -HhcCCCccC---------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000000 011133456789999999999999999999976
No 202
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2e-36 Score=349.56 Aligned_cols=260 Identities=19% Similarity=0.289 Sum_probs=201.8
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
...++|.+.+.||+|+||+||+|.+..++..||+|++... .......+..|+.+++.++||||+++++++... ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~~ 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---AN 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---CC
Confidence 3457899999999999999999999999999999998643 233456789999999999999999999987542 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC----CCeEecCCCCCceeecC----
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCK----PPVVHGDLKPSNVLLDH---- 700 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~----~~ivH~Dlkp~NIll~~---- 700 (869)
...++||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 6789999999999999999764321 1248999999999999999999998521 25999999999999964
Q ss_pred -------------CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHH
Q 002897 701 -------------DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLE 765 (869)
Q Consensus 701 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~e 765 (869)
.+.+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s---------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES---------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc---------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 2358999999997654321 1234568999999998854 458899999999999999
Q ss_pred HHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC
Q 002897 766 MFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM 845 (869)
Q Consensus 766 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 845 (869)
|++|+.||.... ....+........ + ......+..+.++|..||+.+|.+||
T Consensus 236 LLTGk~PF~~~~----~~~qli~~lk~~p-----~-------------------lpi~~~S~eL~dLI~~~L~~dPeeRP 287 (1021)
T PTZ00266 236 LCSGKTPFHKAN----NFSQLISELKRGP-----D-------------------LPIKGKSKELNILIKNLLNLSAKERP 287 (1021)
T ss_pred HHHCCCCCCcCC----cHHHHHHHHhcCC-----C-------------------CCcCCCCHHHHHHHHHHhcCChhHCc
Confidence 999999996422 1112111110000 0 00012345688999999999999999
Q ss_pred CHHHHHH
Q 002897 846 QMRDVVV 852 (869)
Q Consensus 846 s~~evl~ 852 (869)
++.|++.
T Consensus 288 Sa~QlL~ 294 (1021)
T PTZ00266 288 SALQCLG 294 (1021)
T ss_pred CHHHHhc
Confidence 9999984
No 203
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=6e-36 Score=316.58 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=199.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+.+++.++|++++++++.+.+. +..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-----CEE
Confidence 3677889999999999999999999999999986432 22235577899999999999999999986543 679
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999865432 2489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... ......|+..|+|||++.+..++.++||||+||++|+|++|+.||....... ....... ..
T Consensus 149 ~~~~~~~~---------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~~~-~~ 217 (285)
T cd05630 149 AVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVER-LV 217 (285)
T ss_pred eeecCCCc---------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHHHh-hh
Confidence 87553321 1123468999999999999899999999999999999999999997532211 0011100 00
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
. .... .....+...+.+++.+||+.||++||| ++|+++
T Consensus 218 ~-~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 218 K-EVQE----------------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred h-hhhh----------------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0 0000 001123445789999999999999999 888887
No 204
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=294.39 Aligned_cols=258 Identities=22% Similarity=0.259 Sum_probs=207.9
Q ss_pred HhcCCCCC-CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSS-NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 629 (869)
.+++|++. ++||-|-.|.|-.+.++.+|+.+|+|++.. ....++|++..-.. .|||||.++++|... +.+..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 45677764 589999999999999999999999999843 24567888875555 699999999998765 77788
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl 706 (869)
...+|||.|+||.|+..+...+.. .+++.++..|+.||+.|+.|||+. +|.||||||+|+|.... -.+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 899999999999999999988754 599999999999999999999999 99999999999999754 47999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+|+..... .......-|+.|.|||++...+|+..+|+||+||++|-|++|.+||.+.... .+..-
T Consensus 206 tDfGFAK~t~~~---------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aispg 274 (400)
T KOG0604|consen 206 TDFGFAKETQEP---------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPG 274 (400)
T ss_pred cccccccccCCC---------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCChh
Confidence 999999865432 2233445799999999999999999999999999999999999999764332 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+..+.....+.. .+.....++...++|+.+++.+|++|.|++|+++
T Consensus 275 Mk~rI~~gqy~FP-------------------~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 275 MKRRIRTGQYEFP-------------------EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHhHhhccCccCC-------------------ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1111111111211 2233466778889999999999999999999986
No 205
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=321.26 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=198.8
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
|+-.+.||.|+||.||-|++..+.+.||||.+....+ +....+.+|+..|++++|||++.+-|+|... ...|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----chHH
Confidence 4455789999999999999999999999999975443 3456789999999999999999999987643 6679
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||| -|+..+.+.-.+. ++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.|
T Consensus 103 LVMEYC-lGSAsDlleVhkK-----plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHH-hccHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 999999 5588888876554 488999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCccc---CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG---TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
....+. ..++|||.|||||++ ..+.|+-|+||||+|++..|+...++|...+... ...+
T Consensus 174 si~~PA------------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM----SALY-- 235 (948)
T KOG0577|consen 174 SIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALY-- 235 (948)
T ss_pred hhcCch------------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH----HHHH--
Confidence 876543 346899999999986 4578999999999999999999999997543211 1111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+...- .|.+ ...+....+..++..|++.-|.+|||.+++++
T Consensus 236 HIAQNe----sPtL-----------------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 236 HIAQNE----SPTL-----------------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHhcC----CCCC-----------------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 111110 1111 12255677889999999999999999998876
No 206
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=310.99 Aligned_cols=250 Identities=20% Similarity=0.315 Sum_probs=207.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch--hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG--ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..+-|...+.||+|.|++|-+|++.-+|+.||||++++..-+ ....+.+|++-|+.++|||||++|++.. ...
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD-----TQT 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID-----TQT 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc-----ccc
Confidence 346688899999999999999999999999999999765433 3456889999999999999999999854 458
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-cCCCcEEEcc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL-DHDMVAHVGD 708 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~D 708 (869)
..|+|+|.-.+|+|++|+.+.... +.+....+++.||+.|+.|+|+. .+||||+||+||.+ ..-|-|||.|
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~G-----l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTD 162 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEG-----LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTD 162 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhcc-----ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeee
Confidence 899999999999999999887653 99999999999999999999999 99999999999865 5678999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCC-ccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEAS-MTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||++-.+.++ ......+|+..|-|||++.|..|+ +++||||+|||+|.+++|++||+..... ..+..
T Consensus 163 FGFSNkf~PG---------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-ETLTm-- 230 (864)
T KOG4717|consen 163 FGFSNKFQPG---------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-ETLTM-- 230 (864)
T ss_pred ccccccCCCc---------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-hhhhh--
Confidence 9999876554 345567899999999999999885 5779999999999999999999853222 11111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.|-.. ..+.....++.+||..|+..||++|.|.+||+.
T Consensus 231 ----------ImDCKY----------------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 231 ----------IMDCKY----------------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ----------hhcccc----------------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 111110 112355677889999999999999999999975
No 207
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.2e-36 Score=318.69 Aligned_cols=277 Identities=19% Similarity=0.298 Sum_probs=198.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|++..++..||+|+++... ....+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ-----ESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee-----CCeEE
Confidence 5788999999999999999998899999999986432 2234678899999999999999999999754 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ ++|.+++..... ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 689998875432 12489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
....... .......+++.|+|||++.+. .++.++|||||||++|+|+||+.||........... ......
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~-~~~~~~ 219 (285)
T cd07861 149 RAFGIPV--------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFR-IFRILG 219 (285)
T ss_pred eecCCCc--------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HHHHhC
Confidence 7553321 112233568899999987654 478899999999999999999999975322111110 000000
Q ss_pred ccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......-.......+... ...............+.++.+++.+||+.||++|||+.||+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 220 TPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000000000 000000000011124567789999999999999999999975
No 208
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.7e-36 Score=318.34 Aligned_cols=267 Identities=23% Similarity=0.372 Sum_probs=200.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCC--------------CeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGEN--------------GMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIIT 618 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~ 618 (869)
++|++.++||+|+||.||+|.+... ...||+|.++.. .......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5799999999999999999987532 235899998643 2334567899999999999999999999
Q ss_pred EeeccccCCCceEEEEeecccCCCHHHHHhhCCCc------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 619 ICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDK------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 619 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
++.. ....++||||+++++|.+++...... .....+++..++.++.|++.|++|||+. +++|||||
T Consensus 85 ~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVS-----DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcC-----CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 9754 36789999999999999999654211 0112378899999999999999999999 99999999
Q ss_pred CCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc--CC
Q 002897 693 PSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS--RR 770 (869)
Q Consensus 693 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t--g~ 770 (869)
|+||+++.++.+||+|||++........ ........++..|+|||+..++.++.++|||||||++|+|++ |.
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~ 230 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDY------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE 230 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcc------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999976543211 011223345778999999988889999999999999999998 56
Q ss_pred CCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 002897 771 RPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDV 850 (869)
Q Consensus 771 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 850 (869)
.||...... ................... ...+.++..+.+++.+||+.||++|||+++|
T Consensus 231 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i 289 (295)
T cd05097 231 QPYSLLSDE-QVIENTGEFFRNQGRQIYL--------------------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKI 289 (295)
T ss_pred CCCcccChH-HHHHHHHHhhhhccccccC--------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 677643211 1111111100000000000 0001234578899999999999999999999
Q ss_pred HHHHH
Q 002897 851 VVKLC 855 (869)
Q Consensus 851 l~~L~ 855 (869)
++.|+
T Consensus 290 ~~~l~ 294 (295)
T cd05097 290 HHFLR 294 (295)
T ss_pred HHHHh
Confidence 99886
No 209
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.8e-36 Score=316.14 Aligned_cols=261 Identities=23% Similarity=0.389 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCC-----CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGEN-----GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--- 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--- 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC---
Confidence 35788999999999999999998643 4789999986433 23346788999999999999999999996543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
...++||||+++|+|.+++....... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++
T Consensus 82 --~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 82 --QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred --CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 77899999999999999997644221 122478899999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~ 781 (869)
.+||+|||.++........ .......++..|+|||.+.+..++.++|||||||++||+++ |..||......
T Consensus 157 ~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 228 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE-- 228 (277)
T ss_pred CEEECCcccchhhccCccc------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--
Confidence 9999999999765443210 11223446789999999988889999999999999999998 99998642211
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
...+........ ..+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 229 ---~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 ---EVLKFVIDGGHL-----------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ---HHHHHHhcCCCC-----------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111111100000 001123557889999999999999999999999875
No 210
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.8e-36 Score=319.68 Aligned_cols=267 Identities=25% Similarity=0.362 Sum_probs=206.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-------CCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++|.+.+.||+|+||.||+|.+.. ++..+|+|.++... ......+..|+++++++ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 3679999999999999999998642 33579999997532 33446788899999999 799999999997653
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
...++||||+++|+|.+++....... ....+++.++..++.|++.||+|||+. +++||||||
T Consensus 97 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 -----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 67899999999999999998754210 122489999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||.+......... .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p 242 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 242 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchh------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999998765432110 11111234568999999988889999999999999999998 8888
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|.... ............. ...+..++.++.+++.+||+.+|++|||+.||++
T Consensus 243 ~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 243 YPGVP-----VEELFKLLKEGHR-----------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCcCC-----HHHHHHHHHcCCC-----------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 85421 1111111110000 0011134457889999999999999999999999
Q ss_pred HHHHHHHhh
Q 002897 853 KLCAAREAF 861 (869)
Q Consensus 853 ~L~~~~~~~ 861 (869)
.|.++.+..
T Consensus 295 ~l~~~~~~~ 303 (307)
T cd05098 295 DLDRILALT 303 (307)
T ss_pred HHHHHHHHh
Confidence 999988764
No 211
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=5.6e-36 Score=312.34 Aligned_cols=250 Identities=23% Similarity=0.350 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.++||+|+||.||+|.+..+++.||+|.+..... .+.+.+|++++++++||||+++++++... ...++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcEEE
Confidence 579999999999999999999988899999999865433 57899999999999999999999987643 77899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
++||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 ~~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNK-----TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 9999999999999976543 389999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.......... ... .
T Consensus 148 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~-----~~~-~ 213 (256)
T cd06612 148 QLTDTM--------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF-----MIP-N 213 (256)
T ss_pred hcccCc--------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh-----hhc-c
Confidence 664432 11223457889999999988889999999999999999999999987532211000 000 0
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. . ............+.+++.+||+.||++|||+.||++
T Consensus 214 ~~----~----------------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 214 KP----P----------------PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CC----C----------------CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 0 000011234456889999999999999999999985
No 212
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.3e-36 Score=319.40 Aligned_cols=269 Identities=21% Similarity=0.255 Sum_probs=207.7
Q ss_pred ccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeec
Q 002897 544 ISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSS 622 (869)
Q Consensus 544 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 622 (869)
+...++..+.++|++.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 344555667889999999999999999999999899999999986432 2235678899999999 89999999999876
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
.+.......++||||+++|+|.++++..... ...+++..++.++.|++.||+|||+. +++||||||+||+++.++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 5333446789999999999999988643211 12489999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----CCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----EASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
.+||+|||.+....... .......|+..|+|||.+... .++.++|||||||++|||++|+.||....
T Consensus 166 ~~kl~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~ 237 (291)
T cd06639 166 GVKLVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMH 237 (291)
T ss_pred CEEEeecccchhccccc--------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCc
Confidence 99999999987654322 112234578999999987543 26889999999999999999999986532
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .....+.+.. ..... ..++....+.+++.+||+.+|++||++.|+++
T Consensus 238 ~~-~~~~~~~~~~----~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 238 PV-KTLFKIPRNP----PPTLL---------------------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HH-HHHHHHhcCC----CCCCC---------------------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 1111111000 00000 11123456889999999999999999999976
No 213
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=7e-36 Score=318.39 Aligned_cols=267 Identities=21% Similarity=0.375 Sum_probs=201.3
Q ss_pred cCCCCCCeeeeecceEEEEEEEC----------------CCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG----------------ENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKI 616 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~ 616 (869)
++|++.++||+|+||.||+|.+. .++..||+|++... .......+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 57999999999999999998643 23457999998654 23345678999999999999999999
Q ss_pred EEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcc-----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 002897 617 ITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL-----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDL 691 (869)
Q Consensus 617 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 691 (869)
++++... +..++||||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 9997553 66899999999999999998754221 112478889999999999999999999 9999999
Q ss_pred CCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc--C
Q 002897 692 KPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS--R 769 (869)
Q Consensus 692 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t--g 769 (869)
||+||+++.++.++|+|||.+..+...... .......++..|+|||...++.++.++|||||||++|||++ |
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~ 230 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYY------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCK 230 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcce------eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCC
Confidence 999999999999999999999765432210 11122344678999999888889999999999999999998 7
Q ss_pred CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
..||....... ................ ..+.+..++..+.+++.+||+.||++||++.|
T Consensus 231 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 289 (296)
T cd05095 231 EQPYSQLSDEQ-VIENTGEFFRDQGRQV--------------------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQE 289 (296)
T ss_pred CCCccccChHH-HHHHHHHHHhhccccc--------------------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 78876432211 1100000000000000 00011124467889999999999999999999
Q ss_pred HHHHHH
Q 002897 850 VVVKLC 855 (869)
Q Consensus 850 vl~~L~ 855 (869)
|++.|+
T Consensus 290 i~~~l~ 295 (296)
T cd05095 290 IHATLL 295 (296)
T ss_pred HHHHHh
Confidence 999886
No 214
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.6e-36 Score=312.43 Aligned_cols=256 Identities=25% Similarity=0.448 Sum_probs=195.4
Q ss_pred CeeeeecceEEEEEEECC---CCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.+++.++||||+++++++... ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----EGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC----CCCcEEEE
Confidence 468999999999998642 3467999998543 334457788999999999999999999976532 25578999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+.+|+|.+++..... ..++..+..++.|+++|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999976543 267888899999999999999999 9999999999999999999999999999765
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC-CCCCCcCccCCchHHHhhhhhcccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR-RRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg-~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
....... ........++..|+|||.+.+..++.++|||||||++|||++| .+||.... ............
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~~~~~ 219 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVYLLQGR 219 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhcCC
Confidence 4321100 0111233457789999999888899999999999999999995 55554321 111111111000
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
....+..++..+.+++.+||+.+|++||++.||++.|+++..
T Consensus 220 -----------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 220 -----------------------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -----------------------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 000011234568899999999999999999999999998764
No 215
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.1e-36 Score=318.60 Aligned_cols=254 Identities=22% Similarity=0.369 Sum_probs=203.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||.|+||.||+|.+..++..||+|+++.......+.+..|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY-----ENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec-----CCeEE
Confidence 3578999999999999999999988899999999976666666788999999999999999999998754 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... .+++..++.++.|++.|+.|||+. +|+|+||||+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 99999999999999876543 389999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
....... .......|+..|+|||.+. +..++.++|||||||++|+|++|+.||...... .....+.
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~ 221 (280)
T cd06611 151 AKNKSTL--------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKIL 221 (280)
T ss_pred hhhcccc--------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHh
Confidence 7543321 1223345889999999874 345778999999999999999999998753211 0111110
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. ... +. ...+..++..+.+++.+||+.+|++||+++++++.
T Consensus 222 ~----~~~-----~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 222 K----SEP-----PT----------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred c----CCC-----CC----------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0 000 00 00111234567899999999999999999999874
No 216
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-35 Score=319.09 Aligned_cols=267 Identities=26% Similarity=0.403 Sum_probs=205.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-------CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-------ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++|.+.++||+|+||.||+|++. .....||+|.++... ......+..|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 467899999999999999999863 235679999986432 33456788999999999 699999999987543
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
...++||||+++|+|.+++...... .....+++.++..++.|++.||+|||++ |++||||||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 91 -----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 6789999999999999999765321 0123489999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p 236 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYY------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccc------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCC
Confidence 9999999999999999999866432210 01111224567999999988889999999999999999999 8888
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|..... ............. ..+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 237 ~~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 237 YPGIPV-----EELFKLLREGHRM-----------------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred CCCCCH-----HHHHHHHHcCCCC-----------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 864221 1111111100000 001123456789999999999999999999999
Q ss_pred HHHHHHHhh
Q 002897 853 KLCAAREAF 861 (869)
Q Consensus 853 ~L~~~~~~~ 861 (869)
.|.++....
T Consensus 289 ~l~~~~~~~ 297 (314)
T cd05099 289 ALDKVLAAV 297 (314)
T ss_pred HHHHHHHHh
Confidence 999987654
No 217
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-36 Score=315.66 Aligned_cols=253 Identities=27% Similarity=0.431 Sum_probs=199.5
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhh--HHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGAL--KSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.+.||+|+||+||+|.+..+++.||+|++........ ....+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 5677899999999999999999999999999976544332 234569999999999999999999765 378899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++.... .+++..+..++.|+++||++||+. +++|+||||+||+++.++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 999999999999998333 389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccC-CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
..... ........++..|+|||+.. +..++.++||||+|+++|+|++|..||..... ............
T Consensus 147 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~~ 216 (260)
T PF00069_consen 147 KLSEN--------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKILK 216 (260)
T ss_dssp ESTST--------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHHH
T ss_pred ccccc--------ccccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhccc
Confidence 65211 12334566899999999998 78899999999999999999999999975410 011111110000
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... . ... .........+.+++.+||+.||++|||+.|+++
T Consensus 217 ~~~----~----~~~------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 217 RPL----P----SSS------------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp THH----H----HHT------------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccc----c----ccc------------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 0 000 000011267889999999999999999999975
No 218
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.3e-39 Score=333.58 Aligned_cols=373 Identities=25% Similarity=0.392 Sum_probs=278.1
Q ss_pred cCcCCCEEEccCCccC-ccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchh
Q 002897 44 NLSALQVIDIRGNRLG-GKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLR 122 (869)
Q Consensus 44 ~l~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 122 (869)
-|+-.+-.|+++|.++ +..|....++++++.|.|.+.++. .+|..++.+.+|++|.+++|++. ++. +.++.|+.|+
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vh-GELs~Lp~LR 81 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVH-GELSDLPRLR 81 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhh-hhhccchhhH
Confidence 3456677788888887 477778888888888888888887 67888888888888888888886 444 4577888899
Q ss_pred hhhccccccc-eeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcE
Q 002897 123 KFVAAKNNLT-GFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLEN 201 (869)
Q Consensus 123 ~L~l~~n~i~-~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~ 201 (869)
.+.+..|++. .-+|..+..+..|++||||+|++.. .|..+...+++-.|+|++|+|.++|.. .|.+++.|-.
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~E-vP~~LE~AKn~iVLNLS~N~IetIPn~------lfinLtDLLf 154 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLRE-VPTNLEYAKNSIVLNLSYNNIETIPNS------LFINLTDLLF 154 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhhh-cchhhhhhcCcEEEEcccCccccCCch------HHHhhHhHhh
Confidence 9999998885 2356777788899999999998864 566778888888888888888888754 5777788888
Q ss_pred EEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcc-eecCCccccCCCCCCEEEccCc
Q 002897 202 LGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQL-IGTVPPEIGWLKNLQSLYLNSN 280 (869)
Q Consensus 202 L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~L~~N 280 (869)
||||+|++. .+|..+..+.. |++|+|++|.+....-..+..+++|+.|.+++.+- ...+|.++..+.||..++|+.|
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~-LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N 232 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSM-LQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSEN 232 (1255)
T ss_pred hccccchhh-hcCHHHHHHhh-hhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcccccc
Confidence 888888887 66666777765 77777777776543333444555555555555432 1234555555555555555555
Q ss_pred cccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCc
Q 002897 281 FLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLP 360 (869)
Q Consensus 281 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p 360 (869)
.+. ..|+.+.++.+|+.|+||+|+|+ .+........+|++ |+||.|+++ .+|
T Consensus 233 ~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEt-------------------------LNlSrNQLt-~LP 284 (1255)
T KOG0444|consen 233 NLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLET-------------------------LNLSRNQLT-VLP 284 (1255)
T ss_pred CCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhh-------------------------hccccchhc-cch
Confidence 554 45555555555555555555554 33333444444444 555555555 799
Q ss_pred ccccCCccccccccccccccc-cCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCcccccccc
Q 002897 361 SEIGNLKNLVQLDISGNRFSG-DIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLS 439 (869)
Q Consensus 361 ~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 439 (869)
+++..+++|+.|++.+|+++- -+|..++.+.+|+++..++|.+. ..|..++.+..|+.|.|+.|++- ++|+.+.-++
T Consensus 285 ~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~ 362 (1255)
T KOG0444|consen 285 DAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLP 362 (1255)
T ss_pred HHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcC
Confidence 999999999999999999873 47899999999999999999998 99999999999999999999998 8999999999
Q ss_pred ccCeeccccccCcccCCCC
Q 002897 440 FLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 440 ~L~~l~l~~N~l~~~~~~~ 458 (869)
.|+.||+.+|+----+|..
T Consensus 363 ~l~vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 363 DLKVLDLRENPNLVMPPKP 381 (1255)
T ss_pred CcceeeccCCcCccCCCCc
Confidence 9999999999866555543
No 219
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=6.9e-36 Score=314.16 Aligned_cols=258 Identities=22% Similarity=0.390 Sum_probs=204.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCC---CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.+|++.++||+|+||.||+|.+... ...||+|...... ....+.+.+|+.+++.++||||+++++++.+ .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4688899999999999999987533 3579999886544 4455788999999999999999999998753 4
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.++|+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 46899999999999999976543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++....... .......++..|+|||.+....++.++|||||||++||+++ |..||........ ......
T Consensus 152 g~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~-~~~~~~ 223 (270)
T cd05056 152 GLSRYLEDESY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV-IGRIEN 223 (270)
T ss_pred ceeeecccccc-------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHc
Confidence 99976644321 11112234568999999988889999999999999999986 9999975432111 111000
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.. ....++.++..+.+++.+|+..+|++|||+.|+++.|.+++.+
T Consensus 224 ----~~-----------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 224 ----GE-----------------------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----CC-----------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 00 0001123455788999999999999999999999999988754
No 220
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.2e-35 Score=309.79 Aligned_cols=251 Identities=32% Similarity=0.460 Sum_probs=203.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.. .|+.||+|.++.... ..+++.+|+.+++.++|+||+++++++.+ ....+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeE
Confidence 45789999999999999999998 589999999975543 45788999999999999999999998654 37789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 99999999999999986542 1389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+...... ....++..|+|||++.++.++.++||||||+++|++++ |..||...... .......
T Consensus 150 ~~~~~~~-----------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~ 213 (256)
T cd05039 150 KEASQGQ-----------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPHVE 213 (256)
T ss_pred ccccccc-----------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHh
Confidence 8653221 11234668999999988889999999999999999997 99998643211 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
.... ...+..++..+.+++.+||+.+|++|||+.|++++|+.+
T Consensus 214 ~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 214 KGYR-----------------------MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred cCCC-----------------------CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0000 000112346788999999999999999999999998753
No 221
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.5e-36 Score=321.78 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=172.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|+.+++.++|+||+++++++.+ .+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-----ENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec-----CCe
Confidence 4789999999999999999999989999999999642 22334568899999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 9999999999999999976433 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
.+........ .......||+.|+|||++.. ..++.++||||+||++|+|++|+.||..
T Consensus 148 ~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADGT-------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCCC-------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 9876543221 11223468999999999863 4578899999999999999999999964
No 222
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.7e-36 Score=318.06 Aligned_cols=268 Identities=22% Similarity=0.356 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC----------------eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG----------------MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIK 615 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 615 (869)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457999999999999999999876433 568999986443 344577899999999999999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcc-----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL-----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGD 690 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 690 (869)
+++++... ...++||||+++++|.+++....... ....+++..++.++.|++.||+|||+. +++|||
T Consensus 84 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 99997643 67899999999999999997754211 112489999999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc--
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-- 768 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-- 768 (869)
|||+||+++.++.++|+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~ 229 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC 229 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence 9999999999999999999998765433211 11223446788999999988889999999999999999998
Q ss_pred CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 769 RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 769 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|..||...... ..+.............. ....+..++.++.+++.+||+.||++|||+.
T Consensus 230 ~~~p~~~~~~~-~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~ 288 (296)
T cd05051 230 REQPYEHLTDQ-QVIENAGHFFRDDGRQI--------------------YLPRPPNCPKDIYELMLECWRRDEEDRPTFR 288 (296)
T ss_pred CCCCCCCcChH-HHHHHHHhccccccccc--------------------cCCCccCCCHHHHHHHHHHhccChhcCCCHH
Confidence 67777542211 11111100000000000 0001112346789999999999999999999
Q ss_pred HHHHHHH
Q 002897 849 DVVVKLC 855 (869)
Q Consensus 849 evl~~L~ 855 (869)
||++.|+
T Consensus 289 el~~~L~ 295 (296)
T cd05051 289 EIHLFLQ 295 (296)
T ss_pred HHHHHhc
Confidence 9998875
No 223
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.8e-36 Score=320.47 Aligned_cols=275 Identities=20% Similarity=0.283 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.++||+|+||.||+|.+..+++.||+|.++... ......+.+|+.+++.++||||+++++++.. ....+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-----~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT-----EKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec-----CCeEE
Confidence 57999999999999999999998899999999986433 2234567889999999999999999999754 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ ++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred EEEeccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 9999997 599999876543 388999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh-
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV- 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~- 790 (869)
....... .......+++.|+|||++.+. .++.++|||||||++|+|++|+.||....... .........
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~-~~~~~~~~~~ 222 (301)
T cd07873 152 RAKSIPT--------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE-QLHFIFRILG 222 (301)
T ss_pred hccCCCC--------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcC
Confidence 7543221 112234578899999987654 47889999999999999999999997532211 111111100
Q ss_pred --cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 --LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 --~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....+....+............ .........+..+..+.+++.+|++.||.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKY-RADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCChhhchhhhccccccccccCcc-ccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000111111000000000000 000000011123456789999999999999999999987
No 224
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.4e-35 Score=312.92 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=203.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..|+..++||.|+||.||+|.+..++..||+|++.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEEE
Confidence 45788899999999999999998889999999987443 34557789999999999999999999997653 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++... ++++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+
T Consensus 79 lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 999999999999998753 278899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||++.+..++.++|||||||++|||++|+.||....... ..... .
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~~-~ 214 (277)
T cd06640 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VLFLI-P 214 (277)
T ss_pred eeccCCc--------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----Hhhhh-h
Confidence 7654322 11223457889999999988889999999999999999999999986432110 00000 0
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. .........++..+.+++.+||+.+|++||++.|++..
T Consensus 215 ~----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 215 K----------------------NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred c----------------------CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0 00011223456778899999999999999999999875
No 225
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=9e-36 Score=316.40 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=203.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--- 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--- 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC---
Confidence 467999999999999999999874 367899999986543 23346788999999999999999999987643
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc----------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL----------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGD 690 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 690 (869)
...++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +++|||
T Consensus 81 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 81 --KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred --CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 67899999999999999997543211 123478899999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-C
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-R 769 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g 769 (869)
|||+||+++.++.++|+|||.+..+...... .......++..|+|||...+..++.++|||||||++|||++ |
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~ 229 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYY------KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 229 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCccc------cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999998755332110 11122334678999999988899999999999999999998 8
Q ss_pred CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
..||..... .+............ .++.++.++.+++.+||+.||++|||+.|
T Consensus 230 ~~p~~~~~~-----~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 230 MQPYYGMAH-----EEVIYYVRDGNVLS-----------------------CPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred CCCCCCCCH-----HHHHHHHhcCCCCC-----------------------CCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 888854321 11111111111000 01123456889999999999999999999
Q ss_pred HHHHHH
Q 002897 850 VVVKLC 855 (869)
Q Consensus 850 vl~~L~ 855 (869)
+++.|+
T Consensus 282 l~~~l~ 287 (288)
T cd05050 282 INRILQ 287 (288)
T ss_pred HHHHhh
Confidence 999886
No 226
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-36 Score=331.75 Aligned_cols=275 Identities=21% Similarity=0.219 Sum_probs=199.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++|+||+++++++... ...+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVG-----GLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEEE
Confidence 457999999999999999999999899999999642 23467899999999999999999987653 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|||++. ++|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999995 699998876433 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccC---CchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHE---GLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~---~~~~~~~~~~ 789 (869)
+....... ........||..|+|||++.+..++.++|||||||++|||++|..|+...... ........+.
T Consensus 308 ~~~~~~~~------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~ 381 (461)
T PHA03211 308 CFARGSWS------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRI 381 (461)
T ss_pred eecccccc------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHH
Confidence 86543211 01123456999999999999999999999999999999999988765332111 1111111111
Q ss_pred hcc-----cccccccCccchhhhhhcccc--cCCCccchHH---HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLP-----EKVMEIVDPSLLLEVRANNSM--SRGGERVKIE---ECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~-----~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... ..........+...+...... .......... .....+.+++.+||+.||++|||+.|+++.
T Consensus 382 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 382 IRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 100 001111111111111110000 0000010011 223467899999999999999999999864
No 227
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.2e-36 Score=315.31 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=198.2
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|+++++.++|++|+++.+++.. .+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~-----~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET-----KDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec-----CCEEE
Confidence 667789999999999999999999999999986432 2223457889999999999999999988654 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 99999999999988865432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... ......|+..|+|||++.+..++.++||||+||++|+|++|+.||...... ............
T Consensus 150 ~~~~~~~---------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~~~~~~~~~~ 219 (285)
T cd05632 150 VKIPEGE---------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKREEVDRRVLE 219 (285)
T ss_pred eecCCCC---------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhhc
Confidence 7653321 112346899999999998888999999999999999999999999743211 111111111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVVK 853 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 853 (869)
.. . ......+..+.+++..|++.||++||+ +.|++..
T Consensus 220 ~~--~----------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 220 TE--E----------------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cc--c----------------------ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00 0 001123445779999999999999999 6676663
No 228
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9e-36 Score=321.04 Aligned_cols=204 Identities=21% Similarity=0.296 Sum_probs=164.3
Q ss_pred CCeeeeecceEEEEEEEC--CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 559 SNMVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
.++||+|+||+||+|++. .+++.||+|.++... ....+.+|++++++++||||+++++++... .....++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence 468999999999999975 467899999986432 235578899999999999999999987542 2356899999
Q ss_pred cccCCCHHHHHhhCCCcc---cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEccc
Q 002897 637 FMQNGSLEEWLHQNNDKL---EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL----DHDMVAHVGDF 709 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Df 709 (869)
|++ ++|.+++....... ....+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 985 58988876432211 122489999999999999999999999 99999999999999 45679999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
|+|+....... .........||+.|+|||++.+. .++.++||||+||++|+|++|++||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc-----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99986643321 11223346789999999998764 5899999999999999999999999753
No 229
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-36 Score=315.07 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=196.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEee--cccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLN--LMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
....|++.++||+||.+.||++... +.+.||+|.+. ..+......|.+|+..|.++ .|.+||++++|-.. +
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d 432 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----D 432 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----C
Confidence 3457999999999999999999986 55666666553 34556678899999999999 59999999999543 4
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..|+||||= ..+|..+++..... ++...++.+..||+.|+.++|.+ ||||.||||.|+|+ -.|.+||+|
T Consensus 433 ~~lYmvmE~G-d~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 GYLYMVMECG-DIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ceEEEEeecc-cccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeee
Confidence 8999999975 55999999987653 34348889999999999999999 99999999999999 567999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----------CCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----------EASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
||+|..+..+... -.....+||+.||+||.+... +.+.++||||+|||+|+|+.|++||....
T Consensus 503 FGIA~aI~~DTTs------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 503 FGIANAIQPDTTS------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred echhcccCccccc------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 9999988776432 233457899999999986432 25789999999999999999999997421
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .|.+ +..+.||...-++.. . ....++++++..||++||++|||+.|+++
T Consensus 577 n------~~aK------l~aI~~P~~~Iefp~---------~----~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 577 N------QIAK------LHAITDPNHEIEFPD---------I----PENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred H------HHHH------HHhhcCCCccccccC---------C----CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1 1111 122223211111100 0 00123889999999999999999999986
No 230
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-35 Score=309.73 Aligned_cols=254 Identities=23% Similarity=0.442 Sum_probs=201.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|... +++.||+|.+..... ....+.+|+.++++++|+||+++++++.. +..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcE
Confidence 457899999999999999999975 788999999864332 34678899999999999999999987532 5689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 99999999999999876442 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||...... .......
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~ 217 (260)
T cd05067 150 RLIEDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNLE 217 (260)
T ss_pred eecCCCCc-------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHH
Confidence 76653221 11122345678999999988889999999999999999999 99999643211 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.. . . .+.+...+.++.+++.+||+.+|++|||++++...|+.
T Consensus 218 ~~-~----~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 218 RG-Y----R------------------MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred cC-C----C------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 00 0 0 00011234568899999999999999999999998874
No 231
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.2e-35 Score=308.07 Aligned_cols=251 Identities=22% Similarity=0.324 Sum_probs=201.5
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++|+|++++.+.+.. .....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 5889999999999999999999889999999986432 3345678899999999999999999987532 235679
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999986432 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......|++.|+|||+..+..++.++||||+||++|++++|+.||..... .........
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~ 216 (257)
T cd08223 150 RVLENQC--------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIE 216 (257)
T ss_pred EEecccC--------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHh
Confidence 7664321 122334588999999999998999999999999999999999999864211 111111111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ......+..+.+++.+|++.+|++|||+.|+++
T Consensus 217 ~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 217 GKLP-----------------------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cCCC-----------------------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1000 011134456889999999999999999999976
No 232
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-35 Score=313.90 Aligned_cols=268 Identities=23% Similarity=0.351 Sum_probs=209.2
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECC----CCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGE----NGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
..++|++.+.||+|+||.||+|.+.. .+..||+|++... .....+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 34689999999999999999999874 2688999988643 233456788999999999999999999987542
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc--cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL--EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
....++++||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 367899999999999999997653210 113589999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTL 783 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~ 783 (869)
||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ...
T Consensus 157 kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~ 228 (280)
T cd05043 157 KITDNALSRDLFPMDYH------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEM 228 (280)
T ss_pred EECCCCCcccccCCceE------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHH
Confidence 99999999866443211 11122345778999999988889999999999999999999 9999865311 111
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
..+..... . ......++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 229 ~~~~~~~~--------~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 229 AAYLKDGY--------R------------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHHcCC--------C------------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 11111100 0 000112345688999999999999999999999999988753
No 233
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.5e-35 Score=312.36 Aligned_cols=249 Identities=23% Similarity=0.338 Sum_probs=202.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||.|++|.||+|.+..+++.||+|++.... ......+.+|+++++.++|+|++++++++.+. ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeEE
Confidence 36888999999999999999999899999999986543 34456788999999999999999999986543 7889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||+++++|.+++... ++++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999764 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
+...... .......|+..|+|||++.+..++.++|||||||++|+|+||+.||...... ........
T Consensus 146 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~ 212 (274)
T cd06609 146 GQLTSTM--------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFLIPK 212 (274)
T ss_pred eeecccc--------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHHhhh
Confidence 8765432 1123345788999999999888999999999999999999999999643211 00000000
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. ..+.. ....++..+.+++.+||..+|++|||++++++
T Consensus 213 ~-----~~~~~-----------------~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 213 N-----NPPSL-----------------EGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred c-----CCCCC-----------------cccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 00000 00013456789999999999999999999976
No 234
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.3e-35 Score=307.64 Aligned_cols=251 Identities=20% Similarity=0.319 Sum_probs=204.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|+..+.||.|+||.||.++...+++.+++|.+... .....+.+.+|++++++++|+||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-----NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-----CeEE
Confidence 588899999999999999999999999999998643 344456788999999999999999999997543 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999987532 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
........ ......|+..|+|||...+..++.++||||||+++|+|++|..||..... .+.......
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~ 215 (256)
T cd08221 149 KILGSEYS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQ 215 (256)
T ss_pred EEcccccc--------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHc
Confidence 86644321 12334689999999999888899999999999999999999999864211 111111111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... ....++..+.+++.+||+.+|++||+++|+++.
T Consensus 216 ~~~~~-----------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 216 GNYTP-----------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred CCCCC-----------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 10000 012344568899999999999999999999875
No 235
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=325.85 Aligned_cols=258 Identities=27% Similarity=0.441 Sum_probs=212.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeec-ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNL-MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.....++||+|+||+||+|.+-..|+ +||+|++.. .......++..|+-+|.+++|||+++++++|...
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 34556899999999999999976664 688888853 3455568899999999999999999999999763
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
...||++|++.|+|.+|++..++. +.....+.|..|||+||.|||.+ ++|||||.++||||..-.++||.||
T Consensus 771 ~~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 771 TLQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred hHHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEec
Confidence 378999999999999999998764 88999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+....+... .......-.+.|||=|.+....|+.++|||||||++||++| |..|++....++ +.+..+
T Consensus 843 gla~ll~~d~~e------y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--I~dlle 914 (1177)
T KOG1025|consen 843 GLAKLLAPDEKE------YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--IPDLLE 914 (1177)
T ss_pred chhhccCccccc------ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--hhHHHh
Confidence 999988766432 22222334678999999999999999999999999999999 999987643221 111110
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.+.+...++-|+-+++.++.+||..|++.||+++++..++.+..+.
T Consensus 915 --------------------------~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 915 --------------------------KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred --------------------------ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 1112334456778899999999999999999999999999887543
No 236
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=9.1e-36 Score=315.42 Aligned_cols=265 Identities=22% Similarity=0.314 Sum_probs=206.5
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
+..++....+.|++.+.||+|+||.||+|.+..+++.||+|++..... ....+..|+.+++++ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 445556677899999999999999999999998999999999865432 345678899999998 799999999987543
Q ss_pred cc-CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 624 DF-NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 624 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
.. ......+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 21 234678999999999999999976442 2478889999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
.++|+|||.+....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 159 ~~~l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 159 EVKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred CEEEeeCcchhhhhccc--------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 99999999987553221 1223356899999999875 3457889999999999999999999996432
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ....... ....+ ......++..+.+++.+||+.||.+|||+.|+++
T Consensus 231 ~~----~~~~~~~------~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 231 PM----RALFLIP------RNPPP-----------------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HH----hhhhhHh------hCCCC-----------------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 11 0000000 00000 0011134567889999999999999999999975
No 237
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.2e-35 Score=310.14 Aligned_cols=254 Identities=26% Similarity=0.405 Sum_probs=195.9
Q ss_pred CeeeeecceEEEEEEECCCCe--EEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGM--LVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|++..++. .+|+|.++.. .......+.+|+++++++ +||||+++++++... ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEEE
Confidence 468999999999999987775 4688888643 234456788999999999 899999999997653 6689999
Q ss_pred ecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 636 DFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 9999999999997653210 112478999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLH 784 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~ 784 (869)
++|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 153 l~dfgl~~~~~~~---------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~----- 218 (270)
T cd05047 153 IADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA----- 218 (270)
T ss_pred ECCCCCccccchh---------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----
Confidence 9999998532211 01111223567999999988889999999999999999997 99998643211
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
............ ..+..++..+.+++.+||+.+|.+|||+.|+++.|.++.
T Consensus 219 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 219 ELYEKLPQGYRL-----------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHHHhCCCCC-----------------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 111111000000 001123456789999999999999999999999998874
No 238
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.2e-35 Score=317.54 Aligned_cols=261 Identities=25% Similarity=0.445 Sum_probs=204.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
.++|+..+.||+|+||.||+|.+..+|. .||+|.+.... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3578889999999999999999876665 57888886433 2334468899999999999999999998754
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++++||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 235789999999999999986543 388999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||.++........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... ....+
T Consensus 152 Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~ 223 (303)
T cd05110 152 DFGLARLLEGDEKE------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDL 223 (303)
T ss_pred cccccccccCcccc------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 99999866432210 11223345778999999998889999999999999999997 89998643211 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
.... .. . +.+..++..+.+++..||..+|++||+++|+++.++++.+..
T Consensus 224 ~~~~---~~--~---------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 224 LEKG---ER--L---------------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHCC---CC--C---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 1110 00 0 000112346789999999999999999999999999876553
No 239
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-35 Score=310.05 Aligned_cols=253 Identities=26% Similarity=0.452 Sum_probs=199.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|.+.+.||+|++|.||+|.+. .+..+|+|.+.... ...+.+.+|++++++++|||++++++++.. ...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEc-CCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcEE
Confidence 56889999999999999999986 44569999876433 234678899999999999999999988632 45789
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 9999999999999976432 2378999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++..|+|||...+..++.++|||||||++|+|++ |+.||....... ........ ..
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~~-~~ 221 (260)
T cd05069 151 LIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE-VLEQVERG-YR 221 (260)
T ss_pred EccCCcc-------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcC-CC
Confidence 6643221 11112345678999999988889999999999999999999 899986532211 11111000 00
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
...+...+..+.+++.+||+.||++||++++|++.|+.
T Consensus 222 --------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 --------------------------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred --------------------------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 00111345668899999999999999999999999874
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-35 Score=314.95 Aligned_cols=275 Identities=21% Similarity=0.320 Sum_probs=201.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|++|.||+|++..+|+.||+|++.... ....+.+.+|+++++.++|||++++++++... ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK-----RKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-----CEE
Confidence 46889999999999999999999899999999986432 22335678999999999999999999987543 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++++++..+..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 99999999988888776543 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh--
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK-- 788 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-- 788 (869)
+........ ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||......+. ......
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~ 217 (286)
T cd07847 147 ARILTGPGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTL 217 (286)
T ss_pred ceecCCCcc--------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHh
Confidence 987644321 1223457889999999876 4578999999999999999999999975332111 111110
Q ss_pred -hhcccccccccCccch-hhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 -MVLPEKVMEIVDPSLL-LEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 -~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...+ ...+..+.... .....................+..+.+++.+||+.+|++|||+.|++.
T Consensus 218 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 218 GDLIP-RHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCCh-HHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000 00000000000 000000000000000011233567889999999999999999999875
No 241
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.7e-35 Score=310.77 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=200.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc---------hhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---------GALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
+|.+...||+|++|.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++||||+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 47788999999999999999988899999998854321 1235678999999999999999999986543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
...++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 79 ---DHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ---CccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 67899999999999999997654 378899999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||.++.......... .........|+..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..
T Consensus 147 l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~ 220 (267)
T cd06628 147 ISDFGISKKLEANSLSTK--TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QA 220 (267)
T ss_pred ecccCCCcccccccccCC--ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HH
Confidence 999999987653221110 001122345889999999999888999999999999999999999999753211 11
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ....+ ..+...+..+.+++.+||+.||++||++.|+++
T Consensus 221 ~~~~~------~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 IFKIG------ENASP------------------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHHHh------ccCCC------------------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 10000 00000 011134456789999999999999999999976
No 242
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.5e-35 Score=309.07 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=197.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|+..+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 46889999999999999999998899999999986432 22345788999999999999999999986542 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++++||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||+|+||+++.++.++|+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 56789999999999999997654 378999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||++......... ........++..|+|||++.+..++.++||||+||++||+++|+.||..... ......
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMS-----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAAIFK 220 (266)
T ss_pred CCCcccccccccc-----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHHHHH
Confidence 9999765432110 0112234578999999999988899999999999999999999999974311 111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ..+. .+....+.+.+++ +||..+|++||+++||++
T Consensus 221 ~~~~~-----~~~~------------------~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 221 IATQP-----TNPQ------------------LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HhcCC-----CCCC------------------CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00000 0000 1112334455666 688899999999999975
No 243
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-36 Score=326.53 Aligned_cols=194 Identities=24% Similarity=0.353 Sum_probs=166.0
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
....+|++.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++||||+++++++... ..
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSG-----AI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeC-----Ce
Confidence 345689999999999999999999998899999997532 2235699999999999999999987654 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+. ++|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHYS-SDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEccC-CcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 899999995 589998876443 489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCC
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
.++..... .......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 203 ~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 203 AAQFPVVA---------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccC---------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 99743221 1123356899999999999999999999999999999999865554
No 244
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.2e-36 Score=324.55 Aligned_cols=284 Identities=21% Similarity=0.264 Sum_probs=206.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+++|++.++||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.++++++||||+++++++....+.+....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999999899999999986432 3345667889999999999999999998876655556678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++|+||+++ ++.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhccc-CHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 999999964 888887653 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+......... ........|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... .....+....
T Consensus 153 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~-~~~~~~~~~~ 226 (336)
T cd07849 153 ARIADPEHDH-----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL-HQLNLILGVL 226 (336)
T ss_pred eeeccccccc-----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHc
Confidence 9765433211 112234568999999998654 46889999999999999999999999642211 0011111100
Q ss_pred ---cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 ---LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.++......+......................+.....+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001111111111100000000000000000111235678899999999999999999999885
No 245
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.2e-36 Score=318.39 Aligned_cols=271 Identities=20% Similarity=0.298 Sum_probs=197.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++.+ ....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHS-----DKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhcc-----CCceE
Confidence 4788899999999999999999999999999986432 2233567889999999999999999998543 47789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||++ ++|.+++..... .+++..++.++.||++||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999996 588888876433 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+...... .......++..|+|||++.+.. ++.++|||||||++|+|+||+.|+..............+...
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 218 (284)
T cd07839 147 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 218 (284)
T ss_pred hccCCCC--------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhC
Confidence 7654321 1122345788999999887654 789999999999999999999986432221111111111100
Q ss_pred ccc------cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEK------VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~------~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .....+........ ............+..+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 219 TPTEESWPGVSKLPDYKPYPMYP-----ATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCChHHhHHhhhcccccccCCCC-----CcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000 00000000000000 000000111124567789999999999999999999975
No 246
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.7e-35 Score=311.15 Aligned_cols=260 Identities=25% Similarity=0.426 Sum_probs=205.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCe----EEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGM----LVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
..+|++.+.||+|+||.||+|.+..+|+ .||+|...... ......+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 3578899999999999999999876554 58999886443 3345678899999999999999999998753
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~ 151 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKIT 151 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEEC
Confidence 568899999999999999987644 389999999999999999999998 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||.++........ .......++..|+|||......++.++|||||||++||+++ |+.||..... .++
T Consensus 152 dfg~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~ 220 (279)
T cd05057 152 DFGLAKLLDVDEKE------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----VEI 220 (279)
T ss_pred CCcccccccCcccc------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----HHH
Confidence 99999876533210 11112224678999999988889999999999999999999 9999875321 111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
......... . ..+..+...+.+++.+||..+|++||++.++++.|+.+.+.
T Consensus 221 ~~~~~~~~~--~---------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 221 PDLLEKGER--L---------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHhCCCC--C---------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 111110000 0 00011234577999999999999999999999999988654
No 247
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3.3e-35 Score=305.26 Aligned_cols=247 Identities=28% Similarity=0.421 Sum_probs=194.9
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
++||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++||||+++++++... ...++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEECC
Confidence 47899999999999975 788999999865432 3345688999999999999999999997643 6789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++..... .+++..+..++.|++.||.|+|+. +++||||||+||+++.++.+||+|||++......
T Consensus 75 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 99999999876543 378999999999999999999999 9999999999999999999999999998754332
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVME 797 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 797 (869)
.. .......++..|+|||+..+..++.++||||||+++|++++ |..||...... ............
T Consensus 147 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~~~~~~~~~~- 213 (250)
T cd05085 147 IY-------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAREQVEKGYRM- 213 (250)
T ss_pred cc-------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHHcCCCC-
Confidence 11 11112234678999999998889999999999999999998 99998643211 111111000000
Q ss_pred ccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 798 IVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 798 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
..+..++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 214 ----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 ----------------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001123456889999999999999999999999875
No 248
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.1e-35 Score=321.39 Aligned_cols=202 Identities=25% Similarity=0.328 Sum_probs=173.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+++.||+|++... .......+.+|..++..++|++|+++++++.. .+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 4789999999999999999999999999999998642 22334567889999999999999999998654 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 9999999999999999987433 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
++........ .......|++.|+|||++.+ +.++.++|||||||++|+|++|+.||..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDGT-------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCCc-------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 9976543221 11223468999999998865 4678899999999999999999999964
No 249
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.9e-35 Score=308.06 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=202.4
Q ss_pred CeeeeecceEEEEEEECCC---CeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|.+... +..||+|+++..... ..+.+.+|+++++.++|+|++++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4799999999999999765 899999999755433 36788999999999999999999998764 47889999
Q ss_pred ecccCCCHHHHHhhCCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 636 DFMQNGSLEEWLHQNNDK---LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999876211 0012489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ ........++..|+|||.+.+..++.++||||+||++|+|++ |..||..... ........
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~ 221 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLEYLR 221 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHH
Confidence 87654321 012234457889999999988889999999999999999999 6999875411 11111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
... ....+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 222 ~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 KGY-----------------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred cCC-----------------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000 00111234567889999999999999999999998763
No 250
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.5e-35 Score=309.64 Aligned_cols=257 Identities=23% Similarity=0.379 Sum_probs=189.9
Q ss_pred CeeeeecceEEEEEEEC--CCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|... .++..+|+|.++.... .....+.+|+.++++++||||+++++++.+. ...++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEEE
Confidence 46899999999999864 3456799998865432 3345788999999999999999999987543 66899999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999764321 112367788889999999999999999 99999999999999999999999999987543
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCC-------CCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-------EASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
.... ........++..|+|||++.+. .++.++|||||||++|||++ |+.||........ ..
T Consensus 152 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~----~~- 220 (269)
T cd05087 152 KEDY------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV----LT- 220 (269)
T ss_pred Ccce------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH----HH-
Confidence 3211 0112234578889999987642 35789999999999999996 9999965322211 00
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
...........++... ...+..+.+++..|| .+|++|||++||++.|+
T Consensus 221 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 221 YTVREQQLKLPKPRLK------------------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHhhcccCCCCCCccC------------------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 0000111111111110 012345778999999 58999999999998764
No 251
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-35 Score=319.32 Aligned_cols=267 Identities=25% Similarity=0.391 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-------CCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
..+|++.+.||+|+||.||+|++.. .+..||+|.++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 3579999999999999999998642 23478999886432 33456789999999999 899999999997643
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
...+++|||+++|+|.+++...... .....+++.++..++.|++.||+|||++ +++||||||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 91 -----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 6789999999999999999864321 1123488999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p 236 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 236 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999865432210 11122234568999999999899999999999999999998 8888
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|.... .............. ..+..++..+.+++.+||+.+|++|||+.|+++
T Consensus 237 ~~~~~-----~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 237 YPGIP-----VEELFKLLKEGHRM-----------------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred CCCCC-----HHHHHHHHHcCCCC-----------------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 86432 12222111110000 001123456889999999999999999999999
Q ss_pred HHHHHHHhh
Q 002897 853 KLCAAREAF 861 (869)
Q Consensus 853 ~L~~~~~~~ 861 (869)
.|+++....
T Consensus 289 ~l~~~~~~~ 297 (334)
T cd05100 289 DLDRVLTVT 297 (334)
T ss_pred HHHHHhhhc
Confidence 999987543
No 252
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.5e-36 Score=323.03 Aligned_cols=241 Identities=22% Similarity=0.251 Sum_probs=185.7
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC---CCCccceEEEEeeccccCCCceEEEEe
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI---RHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
||+|+||+||+|++..+++.||||++.... .........|..++... +||+|+++++++.. ....++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~-----~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT-----DSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-----CCeEEEEE
Confidence 699999999999999899999999986432 22234455677777655 69999999998654 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999987654 389999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
.... .......||..|+|||++.+. .++.++||||+||++|+|++|+.||..... .+.........
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~ 213 (330)
T cd05586 147 LTDN--------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGK 213 (330)
T ss_pred CCCC--------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCC
Confidence 2221 122345689999999998764 479999999999999999999999964221 11111111100
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ----MRDVVV 852 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 852 (869)
. ... .......+.+++.+||+.||++||+ +.|+++
T Consensus 214 ~-~~~----------------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 214 V-RFP----------------------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred C-CCC----------------------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 000 0012345678999999999999994 555554
No 253
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-35 Score=312.03 Aligned_cols=239 Identities=23% Similarity=0.364 Sum_probs=185.7
Q ss_pred eeeeecceEEEEEEECC------------------------CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceE
Q 002897 561 MVGQGSFGTVFKGIIGE------------------------NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKI 616 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 616 (869)
.||+|+||.||+|.... ....||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998532 124689999876555555678899999999999999999
Q ss_pred EEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 002897 617 ITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNV 696 (869)
Q Consensus 617 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 696 (869)
++++... ...++||||+++|+|..++..... .+++..+..++.|+++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 9998654 678999999999999999876443 388999999999999999999999 999999999999
Q ss_pred eecCCC-------cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHH-
Q 002897 697 LLDHDM-------VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMF- 767 (869)
Q Consensus 697 ll~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~- 767 (869)
+++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSR------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccc------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 997654 4899999988643221 12346788999998865 56899999999999999985
Q ss_pred cCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 768 SRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 768 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
+|+.||....... ...+..... . . ++.....+.+++.+||+.+|++|||+
T Consensus 217 ~g~~p~~~~~~~~--~~~~~~~~~-----~-----~------------------~~~~~~~~~~li~~cl~~~p~~Rps~ 266 (274)
T cd05076 217 DGEVPLKERTPSE--KERFYEKKH-----R-----L------------------PEPSCKELATLISQCLTYEPTQRPSF 266 (274)
T ss_pred CCCCCccccChHH--HHHHHHhcc-----C-----C------------------CCCCChHHHHHHHHHcccChhhCcCH
Confidence 6999986432211 111100000 0 0 00112357899999999999999999
Q ss_pred HHHHHHH
Q 002897 848 RDVVVKL 854 (869)
Q Consensus 848 ~evl~~L 854 (869)
+||++.|
T Consensus 267 ~~il~~L 273 (274)
T cd05076 267 RTILRDL 273 (274)
T ss_pred HHHHHhh
Confidence 9999876
No 254
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.4e-35 Score=307.95 Aligned_cols=240 Identities=22% Similarity=0.394 Sum_probs=187.1
Q ss_pred CeeeeecceEEEEEEECC------------CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 560 NMVGQGSFGTVFKGIIGE------------NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
+.||+|+||.||+|+... ....||+|++..........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~---- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD---- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 468999999999998642 2336899988765555566788999999999999999999997643
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc----
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV---- 703 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 703 (869)
...++||||+++|+|..++..... .+++..++.++.||++|++|||+. +|+||||||+||+++.++.
T Consensus 77 -~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 77 -VENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -CCCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 567899999999999999876543 389999999999999999999999 9999999999999987664
Q ss_pred ---EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-CCCCCccccchhhhHHHHHHH-cCCCCCCcCcc
Q 002897 704 ---AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-GSEASMTGDVYSFGILLLEMF-SRRRPTDSMFH 778 (869)
Q Consensus 704 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~il~el~-tg~~pf~~~~~ 778 (869)
++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||.....
T Consensus 148 ~~~~~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 148 GPFIKLSDPGIPITVLSR------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CceeEeCCCCCCccccCc------------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 899999998654221 2245788999999886 456899999999999999998 58888754211
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
. ........ . .... ......+.+++.+||+.||++||++.|+++.+
T Consensus 216 ~--~~~~~~~~----~-~~~~-----------------------~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 A--EKERFYEG----Q-CMLV-----------------------TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred h--HHHHHHhc----C-ccCC-----------------------CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1 00000000 0 0000 01234578999999999999999999999875
No 255
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.6e-35 Score=312.60 Aligned_cols=262 Identities=22% Similarity=0.318 Sum_probs=205.2
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeecccc-CCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDF-NGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 628 (869)
..+++|++.+.||+|++|.||+|.+..+++.+|+|++..... ..+.+.+|+++++++ +|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356899999999999999999999988899999999875443 346789999999999 79999999999876432 335
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 6789999999999999998764311 12489999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
||.+....... .......|+..|+|||++.. ..++.++|||||||++|+|++|+.||...... ...
T Consensus 157 ~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~ 227 (275)
T cd06608 157 FGVSAQLDSTL--------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RAL 227 (275)
T ss_pred Cccceecccch--------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHH
Confidence 99987654321 12233458899999998753 34678999999999999999999999642211 111
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... .+. .......+..+.+++.+||..||++|||+.|+++
T Consensus 228 ~~~~~~~---------~~~----------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 228 FKIPRNP---------PPT----------------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HHhhccC---------CCC----------------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 1110000 000 0011234567889999999999999999999975
No 256
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.9e-35 Score=306.79 Aligned_cols=255 Identities=24% Similarity=0.373 Sum_probs=199.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc------chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ------KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+|++.+.||+|+||+||+|... +|+.+|+|.++... ......+.+|+++++.++|+||+++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----- 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----
Confidence 5788999999999999999875 88999999886432 22345688999999999999999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++++|.+++.... ++++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.++|+|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 78999999999999999997653 378999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+.......... ..........|+..|+|||++.+..++.++|||||||++|++++|+.||...... .....
T Consensus 146 fg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~ 219 (265)
T cd06631 146 FGCARRLAWVGLHG--THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AAMFY 219 (265)
T ss_pred chhhHhhhhccccc--cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HHHHH
Confidence 99997653221110 0111223356899999999999888999999999999999999999999643211 11100
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... .+. .+..++..+.+++.+||+.+|++||++.|++.
T Consensus 220 ~~~~~~~----~~~------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 220 IGAHRGL----MPR------------------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhhccCC----CCC------------------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000 000 01123456789999999999999999999875
No 257
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-35 Score=319.61 Aligned_cols=256 Identities=21% Similarity=0.234 Sum_probs=196.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.++||+|+||+||+|++..+++.||+|++... .......+..|+.++..++|++|+++++++.+ ...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQD-----ENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----CCE
Confidence 4788999999999999999999989999999998642 22234557889999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999987433 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~ 215 (332)
T cd05623 148 SCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVE 215 (332)
T ss_pred hheecccCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHH
Confidence 9875433211 1122356899999999876 3457899999999999999999999996421 111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVVK 853 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 853 (869)
.............. +.....++..+.+++.+|+..+|++ |++++|+++.
T Consensus 216 ~~~~i~~~~~~~~~-------------------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 216 TYGKIMNHKERFQF-------------------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHhCCCccccC-------------------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11111110000000 0011133456778888888654444 7899999765
No 258
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4e-35 Score=307.43 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=198.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|++.+.||+|+||.||.|.+..+|+.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 47889999999999999999999899999999885321 22346788999999999999999999986542 12
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 56789999999999999997653 278889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+......... ........|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ......
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~ 220 (265)
T cd06652 150 FGASKRLQTICLS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFK 220 (265)
T ss_pred Ccccccccccccc-----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHH
Confidence 9999865432110 0112334588999999999888899999999999999999999999864211 111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... . ....+......+.+++.+|+. +|++||+++|+++
T Consensus 221 ~~~~~-~----------------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 221 IATQP-T----------------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HhcCC-C----------------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 11000 0 001112344567788999984 9999999999975
No 259
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-35 Score=313.57 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=204.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||+||+|.+..+|+.||+|++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEE
Confidence 357888999999999999999998899999999986543 33457789999999999999999999997653 788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++.... ++++..+..++.+++.|+.|||+.. +++||||+|+||+++.++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 99999999999999987654 3899999999999999999999732 899999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc------hHHH
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL------TLHE 785 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~------~~~~ 785 (869)
+...... ......|+..|+|||++.+..++.++|||||||++|++++|+.||........ ....
T Consensus 151 ~~~~~~~----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd06620 151 SGELINS----------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD 220 (284)
T ss_pred ccchhhh----------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH
Confidence 8654221 11234689999999999888899999999999999999999999975432211 0001
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
+........ .......+++..+.+++.+||+.||++|||+.|+++..
T Consensus 221 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 221 LLQQIVQEP----------------------PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHHHHhhcc----------------------CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 111110000 00011123556788999999999999999999999864
No 260
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.5e-36 Score=311.83 Aligned_cols=240 Identities=24% Similarity=0.405 Sum_probs=187.6
Q ss_pred CeeeeecceEEEEEEECCCCe-------EEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 560 NMVGQGSFGTVFKGIIGENGM-------LVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+.||+|+||.||+|.+...+. .||+|.+........+.+..|+.+++.++||||+++++++... ...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CCcE
Confidence 469999999999999865443 4888988655555567788999999999999999999997653 5689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--------E
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV--------A 704 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~ 704 (869)
+||||+++|+|.++++.... .+++..+..++.||+.|++|||++ +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999987653 388999999999999999999999 9999999999999987765 6
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCC-CCCCcCccCCch
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRR-RPTDSMFHEGLT 782 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~-~pf~~~~~~~~~ 782 (869)
+++|||.+...... ....++..|+|||++.+. .++.++|||||||++|||++|. .||...... .
T Consensus 148 ~l~d~g~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~ 213 (258)
T cd05078 148 KLSDPGISITVLPK------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--K 213 (258)
T ss_pred EecccccccccCCc------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--H
Confidence 99999988644321 224578899999998874 5789999999999999999985 554421110 0
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
...... .. .. .+.....++.+++.+||+.||++|||++|+++.|
T Consensus 214 ~~~~~~----~~-~~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 214 KLQFYE----DR-HQ-----------------------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHH----cc-cc-----------------------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 000000 00 00 0001224578999999999999999999999876
No 261
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.7e-35 Score=306.04 Aligned_cols=250 Identities=19% Similarity=0.306 Sum_probs=201.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|+||.||.+....+|+.||+|.+... .....+.+.+|+.++++++||||+++++++.. .+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 588899999999999999999989999999998643 23345678999999999999999999998643 47899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999976432 1378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......|+..|+|||+..+..++.++|||||||++|++++|+.||.... ..........
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~ 215 (256)
T cd08218 149 RVLNSTV--------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIR 215 (256)
T ss_pred eecCcch--------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhc
Confidence 7654321 11223457889999999998889999999999999999999999986421 1111111111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ...+...+..+.+++.+||+.+|++||++.||++
T Consensus 216 ~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 216 GSY-----------------------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCC-----------------------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 100 0011133456889999999999999999999986
No 262
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.1e-35 Score=308.11 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=198.8
Q ss_pred CeeeeecceEEEEEEECC-CC--eEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGE-NG--MLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
++||+|++|.||+|.+.. .+ ..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999864 33 3699999976554 566789999999999999999999998643 6789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+...
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987542 2489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.........
T Consensus 148 ~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~ 217 (257)
T cd05040 148 PQNEDHY-----VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKIDKEG 217 (257)
T ss_pred cccccce-----ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHhcC
Confidence 5432110 11123456789999999998899999999999999999999 99998643211 1111110000
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
. ....+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 218 -~---------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 218 -E---------------------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -C---------------------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 00011134567889999999999999999999999875
No 263
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-37 Score=318.60 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=205.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
-|.++..||.|+||.||+|..+.++-..|-|++.....+..+.+.-|++||..++||+||++++.|... +..+|.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-----nkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-----NKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-----CceEEE
Confidence 356778899999999999999988888999999888888899999999999999999999999976543 779999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
.|||.||-....+-.-.. .+++.++.-+++|++.||.|||+. .|||||+|+.|||++-+|.++|+|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~r-----~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGR-----VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999988877654 499999999999999999999999 999999999999999999999999999864
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCccc-----CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYG-----TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.... ......++||+.|||||+. ...+|+.++||||||+++.||..+.+|-...... ..+....+.
T Consensus 180 n~~t--------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-RVllKiaKS 250 (1187)
T KOG0579|consen 180 NKST--------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKS 250 (1187)
T ss_pred chhH--------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-HHHHHHhhc
Confidence 3321 1344567899999999975 4568999999999999999999999995432111 011111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .|. ...+......+.+++.+|+..||..||+++++++
T Consensus 251 e---------PPT----------------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 251 E---------PPT----------------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred C---------CCc----------------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1 111 1122245567889999999999999999999986
No 264
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-35 Score=314.18 Aligned_cols=250 Identities=21% Similarity=0.331 Sum_probs=199.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
.|.....||+|+||.||+|.+..++..||||.+........+.+.+|+.+++.++||||+++++.+.. .+..++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV-----GDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec-----CCeEEEE
Confidence 34445779999999999999988999999999876555556778999999999999999999998654 3788999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
|||+++++|.+++.... +++.++..++.||+.|++|||+. +|+||||||+||+++.++.++|+|||++..
T Consensus 98 ~e~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 98 MEFLEGGALTDIVTHTR-------MNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EeCCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 99999999999986532 78999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
..... .......|+..|+|||...+..++.++|||||||++|||++|+.||....... ..... ....
T Consensus 168 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~-~~~~--- 234 (292)
T cd06658 168 VSKEV--------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRI-RDNL--- 234 (292)
T ss_pred ccccc--------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HhcC---
Confidence 53321 11233468899999999988889999999999999999999999986421110 00000 0000
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.+.. .........+.+++.+||..||++|||++|+++.
T Consensus 235 -----~~~~----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 235 -----PPRV----------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -----CCcc----------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 0001233457789999999999999999999874
No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-35 Score=313.65 Aligned_cols=248 Identities=22% Similarity=0.351 Sum_probs=199.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLK-----GTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccccc-----CCceEE
Confidence 4666788999999999999998889999999986433 3445678999999999999999999998654 377899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++++|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 80 IMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 99999999999998653 388999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......|+..|+|||++.+..++.++|||||||++|||++|+.||........ .... ..
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~-~~ 215 (277)
T cd06642 150 QLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----LFLI-PK 215 (277)
T ss_pred cccCcc--------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----Hhhh-hc
Confidence 654322 111224578899999999988899999999999999999999999864321110 0000 00
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. ..+. ....++..+.+++.+||+.+|++||++.|+++.
T Consensus 216 ~----~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 216 N----SPPT------------------LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred C----CCCC------------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 0 0000 011244568899999999999999999999983
No 266
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-35 Score=325.76 Aligned_cols=275 Identities=21% Similarity=0.209 Sum_probs=199.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC--CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..+|.+.+.||+|+||.||+|... ..++.||+|.+... +...+|++++++++||||+++++++.. ...
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~-----~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW-----KST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee-----CCE
Confidence 357999999999999999999764 35678999987532 335689999999999999999998654 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++|||++. ++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 899999995 68999885433 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC--chHHHhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG--LTLHEFSK 788 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~--~~~~~~~~ 788 (869)
+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+....+
T Consensus 231 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~ 304 (392)
T PHA03207 231 AACKLDAHPD------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR 304 (392)
T ss_pred cccccCcccc------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH
Confidence 9976544321 112234579999999999999999999999999999999999999996543221 11111111
Q ss_pred hhccc--ccccccCccchhhhhhcccccCC-Cc-cch--HHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPE--KVMEIVDPSLLLEVRANNSMSRG-GE-RVK--IEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~--~~~~~~d~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... .........+...+.......+. .. ... ......++.+++.+|+..||++|||+.|++..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 305 CMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11000 00000000011111000000000 00 000 01234567889999999999999999999874
No 267
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.7e-35 Score=313.47 Aligned_cols=276 Identities=20% Similarity=0.269 Sum_probs=200.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch-----hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-----ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|++.+.||+|++|.||+|.+..+|+.||+|.++..... ....+..|++++++++|+||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 478889999999999999999888999999999654322 33566789999999999999999999765 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+ +|+|.+++..... .+++..+..++.|+++||+|||++ +|+|+||+|+||+++.++.++|+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSI-----VLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 889999999 8999999976542 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+....... .......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...... ........
T Consensus 147 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~ 217 (298)
T cd07841 147 GLARSFGSPN--------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE 217 (298)
T ss_pred eeeeeccCCC--------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH
Confidence 9998764432 11222346788999998755 45789999999999999999998887643221 11111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...........+.........................+..+.+++.+||+.||++|||++|+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 218 ALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 10000000000000000000000000000011112345678899999999999999999999874
No 268
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.2e-35 Score=306.18 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=203.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||.|+||.||+|.+..+++.||+|++... .....+.+..|++++++++||||+++++++... +....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR---SNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---CCCEEE
Confidence 588899999999999999999989999999998643 234456788999999999999999999976532 345689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH-----hcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH-----HHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
++|||+++++|.+++...... ..++++..++.++.|++.||+||| +. +++|+||+|+||+++.++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 999999999999999764221 234899999999999999999999 66 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.+....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.... .....
T Consensus 153 d~g~~~~~~~~~--------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~ 219 (265)
T cd08217 153 DFGLAKILGHDS--------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLA 219 (265)
T ss_pred cccccccccCCc--------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHH
Confidence 999998765432 11223468999999999998889999999999999999999999997532 11111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+....... +..+...+..+.+++.+|++.+|++|||+.||++
T Consensus 220 ~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 220 SKIKEGKF-----------------------RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred HHHhcCCC-----------------------CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11110000 0111234467889999999999999999999986
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4e-35 Score=311.19 Aligned_cols=255 Identities=19% Similarity=0.293 Sum_probs=199.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||+|+||.||+|.+..+|+.||+|.+... .......+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI-----EGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec-----CCeEE
Confidence 3688999999999999999999889999999988643 33345678899999999999999999998654 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 124899999999999999999999632 8999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC------CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE------ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
....... .....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||....... .....
T Consensus 151 ~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~ 219 (286)
T cd06622 151 GNLVASL----------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQL 219 (286)
T ss_pred ccccCCc----------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHHH
Confidence 7553221 12235788999999885543 4889999999999999999999996432111 01110
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... ....+..++..+.+++.+||+.+|++||+++|++..
T Consensus 220 -~~~~~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 220 -SAIVDGD-----------------------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -HHHhhcC-----------------------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 0000000 000112345667899999999999999999999874
No 270
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.8e-35 Score=309.26 Aligned_cols=264 Identities=25% Similarity=0.297 Sum_probs=203.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|...++||.|++|.||+|.+..+++.||+|.+..... .....+.+|+++++.++||||+++++++... .....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 367888999999999999999988999999999874332 3456789999999999999999999987643 235689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKR--GGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 999999999999987643221 22488999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||+..........+.......
T Consensus 153 ~~~~~~~----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd06621 153 GELVNSL----------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN 222 (287)
T ss_pred ccccccc----------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc
Confidence 7543321 112347889999999998899999999999999999999999997542211111111111110
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......+ ........++.+.+++.+||+.+|++|||+.|+++
T Consensus 223 ~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 223 MPNPELKD-----------------EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCchhhcc-----------------CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00000000 00000123456889999999999999999999988
No 271
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.8e-35 Score=305.45 Aligned_cols=247 Identities=31% Similarity=0.469 Sum_probs=197.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 5689999999999999999976 78899999986432 33678899999999999999999998653 34689
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999976542 2478999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... .....+..|+|||.+.+..++.++|||||||++|+|++ |+.||..... .........
T Consensus 149 ~~~~~~-----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~ 212 (254)
T cd05083 149 VGSMGV-----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKECVEK 212 (254)
T ss_pred eccccC-----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHHHhC
Confidence 543211 11234568999999988889999999999999999997 9999864321 111111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
. . .......++..+.+++.+||+.+|++||+++++++.|++
T Consensus 213 ~-~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 213 G-Y----------------------RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred C-C----------------------CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 0 000111345667899999999999999999999998763
No 272
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.9e-35 Score=306.34 Aligned_cols=256 Identities=21% Similarity=0.368 Sum_probs=202.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc------chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ------KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+|+..+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|+.++++++|+||+++++++.+ .
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-----D 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc-----C
Confidence 4788899999999999999998899999999986432 1235678999999999999999999999654 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVG 707 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~ 707 (869)
+..++||||+++++|.+++.... ++++..+..++.|++.||+|||++ +++|+||+|+||+++.++ .++|+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 78899999999999999997654 388999999999999999999999 999999999999998776 59999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.+......... .........|+..|+|||.+.+..++.++||||+||++|++++|+.||........ .....
T Consensus 147 dfg~~~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~ 221 (268)
T cd06630 147 DFGAAARLAAKGTG----AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-LALIF 221 (268)
T ss_pred cccccccccccccc----CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-HHHHH
Confidence 99999876543210 11122334688999999999888899999999999999999999999864221110 11100
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .. ......++.....+.+++.+|++.+|++|||+.|+++
T Consensus 222 ~~~-~~----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 222 KIA-SA----------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHh-cc----------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000 00 0011112234567889999999999999999999975
No 273
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.3e-35 Score=312.26 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++|||++++++++... +..+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----CcEE
Confidence 36899999999999999999999888999999998755555567789999999999999999999987543 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||+++++|.+++.... +++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 9999999999999997643 78899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......|++.|+|||.+.+..++.++|||||||++|++++|+.||......... ... ...
T Consensus 163 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~---~~~ 230 (293)
T cd06647 163 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLI---ATN 230 (293)
T ss_pred ecccccc--------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eeh---hcC
Confidence 7554322 1122345888999999998888999999999999999999999999653211100 000 000
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. .........+..+.+++.+||+.+|++||++.|++..
T Consensus 231 ~~----------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 231 GT----------------------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CC----------------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0000112344568899999999999999999999875
No 274
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.2e-35 Score=307.51 Aligned_cols=255 Identities=26% Similarity=0.459 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|.+. +++.||||.+..... ..+.+.+|+.++++++|+||+++++++.. ....+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 77 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEPIY 77 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCceE
Confidence 468999999999999999999986 668899999864332 34678999999999999999999998654 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 99999999999999977542 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||.+.+..++.++||||+||++|++++ |+.||...... ..........
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~~~~~~- 221 (261)
T cd05034 151 RLIEDDEY-------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQVERGY- 221 (261)
T ss_pred eeccchhh-------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCC-
Confidence 86653211 11112234678999999998889999999999999999998 99998643211 1111110000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
. ...+...+..+.+++.+|++.+|++||+++|+.+.|+.
T Consensus 222 ----~----------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 ----R----------------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----C----------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0 00011234568899999999999999999999998864
No 275
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.5e-35 Score=303.83 Aligned_cols=249 Identities=22% Similarity=0.385 Sum_probs=200.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|+..+.||+|++|.||+|....+++.+|+|.+... .......+.+|+++++.++|||++++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 588899999999999999999989999999998643 23345778999999999999999999988543 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 711 (869)
+||||+++++|.+++..... ..+++..+..++.|+++|++|||++ +++|+||+|+||+++.++ .+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999987542 2489999999999999999999999 999999999999998654 689999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 149 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~~ 214 (256)
T cd08220 149 SKILSSKS---------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLKIM 214 (256)
T ss_pred ceecCCCc---------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHHHH
Confidence 98764432 122346889999999999888999999999999999999999998643211 1111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... .+...+..+.+++.+||+.+|++|||+.|+++
T Consensus 215 ~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 215 SGTFAP-----------------------ISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred hcCCCC-----------------------CCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 01123456789999999999999999999986
No 276
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.9e-36 Score=337.24 Aligned_cols=267 Identities=22% Similarity=0.352 Sum_probs=201.7
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-----
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSID----- 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 624 (869)
.-..+|+..+.||+||||.||+|+.+-+|+.||||++... .......+.+|+..+++++|||||+++..|.+..
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4456888899999999999999999999999999999644 3445577899999999999999999985432110
Q ss_pred ------------------------------------------------c-------------------------------
Q 002897 625 ------------------------------------------------F------------------------------- 625 (869)
Q Consensus 625 ------------------------------------------------~------------------------------- 625 (869)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred -CC-----------------------------CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH
Q 002897 626 -NG-----------------------------VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAI 675 (869)
Q Consensus 626 -~~-----------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L 675 (869)
++ ....||-||||+.-++.++++++.-. -.....++++++|++||
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHHH
Confidence 00 02357899999998888888776521 14678899999999999
Q ss_pred HHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCC---------CCCC-CccccCCCCCCccCcccccCCccc
Q 002897 676 EYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPA---------RPLD-TVVETPSSSSGIKGTVGYIAPEYG 745 (869)
Q Consensus 676 ~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~---------~~~~-~~~~~~~~~~~~~gt~~y~aPE~~ 745 (869)
+|+|++ |||||||||.||+++++..|||+|||+|..... .... .........+..+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 999999999999999999999999999987320 0000 111122345678899999999998
Q ss_pred CCCC---CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchH
Q 002897 746 TGSE---ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKI 822 (869)
Q Consensus 746 ~~~~---~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 822 (869)
.+.. |+.|+|+||+|+|++||+. ||....+....+.......+|.. .+..+++.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~------------------- 844 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPEH------------------- 844 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccccc-------------------
Confidence 7654 9999999999999999995 57654444334444443333333 22233222
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 823 EECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 823 ~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.-.++|++|++.||.+||||.|++.
T Consensus 845 ----~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 845 ----PEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ----hHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 22348999999999999999999985
No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.7e-35 Score=308.90 Aligned_cols=255 Identities=23% Similarity=0.370 Sum_probs=204.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|+..+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++... ...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEEE
Confidence 36788899999999999999999899999999986543 34456788999999999999999999986543 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
+|+||+++++|.+++..... .+++..+..++.|+++|++|||+ . +++|+||||+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQG-----RIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999987532 48999999999999999999999 8 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .....++..|+|||...+..++.++||||||+++|+|++|+.||..............+...
T Consensus 148 ~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 217 (265)
T cd06605 148 SGQLVNSL----------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV 217 (265)
T ss_pred chhhHHHH----------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh
Confidence 87553221 11155788999999999889999999999999999999999999754322122222111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... +. ......+..+.+++.+||..+|++|||+.|++..
T Consensus 218 ~~~~-----~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 218 NEPP-----PR-----------------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cCCC-----CC-----------------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1000 00 0001145668899999999999999999999753
No 278
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=9.3e-35 Score=306.23 Aligned_cols=265 Identities=25% Similarity=0.407 Sum_probs=201.5
Q ss_pred CCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC-Cc
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG-VD 629 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 629 (869)
|.+.+.||+|+||.||+|.+.. +++.||||++... .....+++.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678899999999999998643 5789999998643 2334567889999999999999999999876532111 12
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++++||+++|+|.+++...........+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3578999999999999876443221223478999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++........ .......++..|++||...+..++.++|||||||++|+|++ |+.||...... ....
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~-----~~~~ 226 (273)
T cd05074 158 GLSKKIYSGDYY------RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS-----EIYN 226 (273)
T ss_pred cccccccCCcce------ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH-----HHHH
Confidence 999865432210 11122345678999999988889999999999999999999 88888643211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
........ .....++..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 227 ~~~~~~~~-----------------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 227 YLIKGNRL-----------------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHHcCCcC-----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11000000 00012345688999999999999999999999999875
No 279
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=8.7e-35 Score=302.31 Aligned_cols=248 Identities=27% Similarity=0.430 Sum_probs=196.3
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
++||+|+||.||+|.+.. ++.||+|.+...... ....+.+|++++++++|+||+++++++... ...++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-----QPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----CCeEEEEEcC
Confidence 479999999999999976 999999998654333 456789999999999999999999986543 6789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++..... .+++..+..++.+++.|++|||++ +++||||||+||+++.++.++|+|||.+......
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999976543 378999999999999999999999 9999999999999999999999999999765422
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVME 797 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 797 (869)
... .......++..|+|||.+.++.++.++|||||||++|+|++ |..||...... .......... .
T Consensus 147 ~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~-----~ 213 (251)
T cd05041 147 IYT------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY-----R 213 (251)
T ss_pred cce------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC-----C
Confidence 110 11112234567999999988889999999999999999999 88888643211 1111110000 0
Q ss_pred ccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 798 IVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 798 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
...+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 214 ---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 214 ---------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ---------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0011134557889999999999999999999999885
No 280
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.9e-35 Score=310.39 Aligned_cols=260 Identities=23% Similarity=0.363 Sum_probs=202.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECC-----CCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGE-----NGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
++|++.+.||+|+||.||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++|+||+++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA---- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC----
Confidence 578899999999999999999753 3567999988654433 457789999999999999999999986543
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcc---cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKL---EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
...++||||+++|+|.+++....... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 81 -EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred -CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 67899999999999999998655211 012489999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTL 783 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~ 783 (869)
+++|||.+........ .......++..|+|||.+.+..++.++||||||+++|++++ |..||......
T Consensus 157 ~l~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---- 225 (275)
T cd05046 157 KVSLLSLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---- 225 (275)
T ss_pred EEcccccccccCcccc-------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH----
Confidence 9999999875432211 12223456788999999988888999999999999999999 78888642211
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
............. .....++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 226 -~~~~~~~~~~~~~----------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 -EVLNRLQAGKLEL----------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -HHHHHHHcCCcCC----------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1111110000000 001124457889999999999999999999999875
No 281
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.7e-35 Score=304.13 Aligned_cols=251 Identities=27% Similarity=0.474 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|++.+.||+|+||.||+|.+. +++.+|+|.+..... ....+.+|++++++++||+++++++++... ...++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----CceEE
Confidence 47888999999999999999985 578899998864322 235788999999999999999999986543 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++..... .++++.+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 9999999999999976543 378999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......++.+|+|||+..++.++.++||||||+++||+++ |+.||...... ........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~ 216 (256)
T cd05112 149 FVLDDQY-------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVVETINA 216 (256)
T ss_pred ecccCcc-------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHhC
Confidence 6543221 11122335678999999998889999999999999999998 99998642211 11111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
. . ....+ ...+..+.+++.+||+.+|++|||+.|+++.|
T Consensus 217 ~-~-~~~~~---------------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 217 G-F-RLYKP---------------------RLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred C-C-CCCCC---------------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0 0 00000 01235688999999999999999999999886
No 282
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.3e-35 Score=311.67 Aligned_cols=279 Identities=22% Similarity=0.323 Sum_probs=198.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++.+|.+.+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+++.++|+||+++.+++.. ...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~-----~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT-----KET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec-----CCe
Confidence 4578999999999999999999998899999999986443 2233467889999999999999999998654 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+. +++.+++..... .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 899999995 688877765432 378888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.++...... .......++..|+|||++.+. .++.++|||||||++|+|++|+.||+........+......
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~ 220 (291)
T cd07870 149 LARAKSIPS--------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTV 220 (291)
T ss_pred cccccCCCC--------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHH
Confidence 987543221 112233568899999998754 47889999999999999999999997543221111111100
Q ss_pred h-cccc-cc-ccc-CccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 V-LPEK-VM-EIV-DPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~-~~~~-~~-~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .+.. .. ... -+..................+........+.+++.+|+..||++|||+.|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0 0000 00 000 00000000000000000000000012356779999999999999999999874
No 283
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1e-34 Score=303.25 Aligned_cols=254 Identities=23% Similarity=0.428 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|.+. .+..+|+|.+.... ...+.+.+|++++++++|+||+++.+++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 467899999999999999999875 66779999886432 234678899999999999999999988643 4578
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 99999999999999976432 2478899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||++.+..++.++|||||||++|++++ |+.||...... ..........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~ 220 (260)
T cd05073 150 RVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY 220 (260)
T ss_pred eeccCCCc-------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCC
Confidence 76543211 11122345678999999998889999999999999999999 89998643211 1111110000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
. .+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 221 ---~-----------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 ---R-----------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---C-----------------------CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 00011334568899999999999999999999998874
No 284
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.1e-35 Score=307.51 Aligned_cols=254 Identities=26% Similarity=0.423 Sum_probs=196.6
Q ss_pred CeeeeecceEEEEEEECCCC------eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 560 NMVGQGSFGTVFKGIIGENG------MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+.||+|+||.||+|++.... +.+|+|.+.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCeE
Confidence 46899999999999986433 689999885432 23456788999999999999999999987543 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-----cEEE
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKL-EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-----VAHV 706 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl 706 (869)
+||||+++++|.+++....... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .+++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997643221 123478999999999999999999999 999999999999999887 8999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~ 785 (869)
+|||++......... .......++..|+|||++.++.++.++|||||||++|||++ |+.||...... .
T Consensus 153 ~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~-----~ 221 (269)
T cd05044 153 GDFGLARDIYKSDYY------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ-----E 221 (269)
T ss_pred CCccccccccccccc------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH-----H
Confidence 999999765432210 11223345788999999999999999999999999999998 99998642211 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
......... ........+..+.+++.+||+.+|++||++.+|++.|.
T Consensus 222 ~~~~~~~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 222 VLQHVTAGG-----------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHhcCC-----------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 111110000 00111234567889999999999999999999999885
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.1e-35 Score=313.00 Aligned_cols=249 Identities=22% Similarity=0.330 Sum_probs=198.4
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
|.....||+|+||.||+|.+..+++.||+|++........+.+.+|+.+++.++|||++++++++.. .+..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV-----GEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee-----CCeEEEEE
Confidence 3345689999999999999988999999999976554555778899999999999999999998654 37789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++++|.+++... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQT-------RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 999999999988653 288999999999999999999999 9999999999999999999999999998755
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .... .......
T Consensus 168 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~-~~~~~~~- 233 (297)
T cd06659 168 SKDV--------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAM-KRLRDSP- 233 (297)
T ss_pred cccc--------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHHhccC-
Confidence 4321 112235688999999999888899999999999999999999999864211 1111 1110000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.+.. ......+..+.+++.+||+.+|++||+++|+++.
T Consensus 234 ----~~~~----------------~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 234 ----PPKL----------------KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ----CCCc----------------cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000 0001223457799999999999999999999884
No 286
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.3e-34 Score=302.51 Aligned_cols=248 Identities=23% Similarity=0.365 Sum_probs=199.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|+..+.||+|++|.||+|....+++.||+|.+.... ++..+.+.+|+++++.++|+||+++++++... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-----D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC-----C
Confidence 4778899999999999999998899999999986533 23457789999999999999999999986543 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 7899999999999999997654 378999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+....... ......|+..|+|||.+.... ++.++|+|||||++|++++|+.||..... ......
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~ 213 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFK 213 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHH
Confidence 9987654322 123345889999999987766 89999999999999999999999875321 111100
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... ...+......+.+++.+||+.+|++||++.|++.
T Consensus 214 ~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 214 IGRSKEL-----------------------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHhcccC-----------------------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0000000 0001123456778999999999999999999975
No 287
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9.8e-35 Score=313.16 Aligned_cols=204 Identities=21% Similarity=0.306 Sum_probs=163.5
Q ss_pred CCeeeeecceEEEEEEECC--CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 559 SNMVGQGSFGTVFKGIIGE--NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
..+||+|+||+||+|+... ++..||+|.++... ....+.+|++++++++||||+++++++... .....++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSH---SDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEecc---CCCeEEEEEe
Confidence 3689999999999999753 56889999886432 235678899999999999999999987542 3467899999
Q ss_pred cccCCCHHHHHhhCCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEccc
Q 002897 637 FMQNGSLEEWLHQNNDK---LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL----DHDMVAHVGDF 709 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Df 709 (869)
|+++ +|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9865 888887643211 1123488999999999999999999999 99999999999999 56679999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
|+++....... .........||+.|+|||++.+. .++.++||||+||++|||+||++||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCcc-----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99987644321 11222345689999999998764 5799999999999999999999999753
No 288
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-34 Score=303.95 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|+.++++++|+|++++++++... ...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeEE
Confidence 368889999999999999999998899999999875543 4457889999999999999999999997543 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
+||||+++++|.+++.... .+++..+..++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998753 38999999999999999999999 8 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......++..|+|||...+..++.++||||||+++|+|++|+.||...... ...+......
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~ 216 (264)
T cd06623 147 SKVLENTL--------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAIC 216 (264)
T ss_pred ceecccCC--------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHh
Confidence 98664432 1112345788999999999888999999999999999999999999754321 1111111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEE-CLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... ..... ++..+.+++.+||+.+|++|||+.|+++.
T Consensus 217 ~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 217 DGPPP-----------------------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cCCCC-----------------------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000 00011 45678899999999999999999999874
No 289
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.6e-35 Score=311.23 Aligned_cols=274 Identities=21% Similarity=0.328 Sum_probs=197.7
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|+..+.||.|++|.||+|++..+|+.||||+++... ......+.+|++++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-----CCcEE
Confidence 4788999999999999999999899999999986432 2234578899999999999999999998643 47889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999996 689998876432 2489999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
....... .......++..|+|||+..+.. ++.++|||||||++|+|+||+.||....... ...+..+...
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~ 218 (284)
T cd07860 148 RAFGVPV--------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLG 218 (284)
T ss_pred hhcccCc--------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhC
Confidence 7654321 1122234688999999876644 6889999999999999999999996532211 1111111110
Q ss_pred ccccccccCccch--hhhhhcc-cccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLL--LEVRANN-SMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .....+... ....... ...........+.....+.+++.+||+.||++|||++|+++
T Consensus 219 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 219 TP--DEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CC--ChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00 000000000 0000000 00000000001123456779999999999999999999975
No 290
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.3e-35 Score=314.98 Aligned_cols=276 Identities=24% Similarity=0.324 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.++||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 36889999999999999999998889999999885432 2234668899999999999999999998643 4789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++++++.++..... .+++..+..++.|+++|++|||+. +++|||++|+||++++++.++|+|||.
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 99999999999988776543 289999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh-
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM- 789 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~- 789 (869)
+....... .......++..|+|||+..+. .++.++|||||||++|||++|++||...... .........
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~ 217 (286)
T cd07846 147 ARTLAAPG--------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCL 217 (286)
T ss_pred eeeccCCc--------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHh
Confidence 87654322 112234578999999988753 4788999999999999999999998643211 000000000
Q ss_pred -hcccccccccCccchhhhhhccc-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 -VLPEKVMEIVDPSLLLEVRANNS-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 -~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..........+............ ..........+..+..+.+++.+||+.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000001000000000000 0000000111234567899999999999999999999875
No 291
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.5e-35 Score=319.71 Aligned_cols=287 Identities=22% Similarity=0.260 Sum_probs=208.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..+|.+.+.||+|+||+||+|++..+++.||||.++.. .......+.+|+.+++.++|+||+++++++.....+....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45799999999999999999999999999999998643 2333456788999999999999999999876543333356
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+. ++|.+++.... .+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999995 68999887653 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh--
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS-- 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~-- 787 (869)
++....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...... .......
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~ 224 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITEL 224 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHH
Confidence 998654321 11223457889999998765 46889999999999999999999999653211 0000000
Q ss_pred -hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHH
Q 002897 788 -KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK--LCAAR 858 (869)
Q Consensus 788 -~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 858 (869)
....+.......+......................+.++..+.+++.+||+.+|++|||++|+++. ++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000111111111111111111000000001111122456778899999999999999999999986 55543
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.7e-35 Score=310.86 Aligned_cols=276 Identities=20% Similarity=0.303 Sum_probs=197.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||+|++|.||+|.+..+++.||+|.+..... .....+.+|+++++.++||||+++++++.. .+..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHT-----KKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEec-----CCeEE
Confidence 679999999999999999999988999999999864332 223456789999999999999999999654 37899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++ +|.+++..... .+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~-~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred EEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 99999975 99999876543 388999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+...... .......++..|+|||++.+ ..++.++||||+||++|+|++|+.||..............+...
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 222 (291)
T cd07844 151 RAKSVPS--------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLG 222 (291)
T ss_pred cccCCCC--------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcC
Confidence 7543211 11122346889999998865 45789999999999999999999999653311111111111000
Q ss_pred ---ccccccccCccchhhhhhcccccCCCccchHHHH--HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 ---PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEEC--LVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.......+......... ............... ...+.+++.+|++.+|++|||+.|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 223 TPTEETWPGVSSNPEFKPYSF-PFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred CCChhhhhhhhhccccccccc-cccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000000000000000000 000000000000011 256779999999999999999999875
No 293
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1e-34 Score=307.71 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=193.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHH-HHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEA-LRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||.||+|++..+|+.||+|+++... ......+..|+.+ ++..+||||+++++++... ...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~-----~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE-----GDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-----CcE
Confidence 46889999999999999999999899999999986542 2233455566665 5667899999999997643 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ |+|.+++...... ...+++..++.++.|++.|++|||+++ +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999996 6898888653321 135899999999999999999999853 899999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC----CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG----SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
+....... ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .....
T Consensus 151 ~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~ 218 (283)
T cd06617 151 SGYLVDSV---------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQLK 218 (283)
T ss_pred cccccccc---------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHHH
Confidence 87653321 1122457889999998765 34688999999999999999999998642211 11111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .. ..+.. ....++..+.+++.+||..+|++||++.|+++
T Consensus 219 ~~~-~~-----~~~~~-----------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 219 QVV-EE-----PSPQL-----------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred HHH-hc-----CCCCC-----------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 110 00 00000 01124456889999999999999999999987
No 294
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=7.9e-35 Score=305.92 Aligned_cols=257 Identities=23% Similarity=0.328 Sum_probs=187.8
Q ss_pred CeeeeecceEEEEEEEC--CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|... .....+|+|.+.... ......+.+|+++++.++||||+++++++... ...++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEEE
Confidence 36899999999999753 244578889875432 33346678999999999999999999987543 67899999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++....... ....++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999998764321 12256788899999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCC-------CCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-------SEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
..... .......++..|+|||+... ..++.++|||||||++|||++ |..||....... .....
T Consensus 152 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~-- 222 (269)
T cd05042 152 PEDYY------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQV-- 222 (269)
T ss_pred cchhe------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHH--
Confidence 22100 11123345778999998642 356889999999999999999 788886432111 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.........++.. ...++..+.+++..|| .||++|||++||++.|.
T Consensus 223 --~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 223 --VREQDIKLPKPQL------------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --hhccCccCCCCcc------------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111111111110 1123455677888898 59999999999998873
No 295
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.8e-35 Score=314.06 Aligned_cols=260 Identities=27% Similarity=0.354 Sum_probs=202.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.+|+..+.||+|++|+||+|.+..+++.||+|.+..... ...+.+..|+++++.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 368889999999999999999988899999999965432 245678899999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++..... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 8999999999999999876432 2489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc---------------------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC
Q 002897 711 LAKFLPARPLDTVV---------------------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR 769 (869)
Q Consensus 711 ~a~~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg 769 (869)
.+............ ..........|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98765432211000 000112235689999999999988899999999999999999999
Q ss_pred CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC---
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ--- 846 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs--- 846 (869)
+.||...... ..+.... .... ........+..+.+++.+||+.||++|||
T Consensus 229 ~~pf~~~~~~----~~~~~~~-~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~ 281 (316)
T cd05574 229 TTPFKGSNRD----ETFSNIL-KKEV----------------------TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKR 281 (316)
T ss_pred CCCCCCCchH----HHHHHHh-cCCc----------------------cCCCccccCHHHHHHHHHHccCCHhHCCCchh
Confidence 9999643221 1111100 0000 00000114567889999999999999999
Q ss_pred -HHHHHH
Q 002897 847 -MRDVVV 852 (869)
Q Consensus 847 -~~evl~ 852 (869)
++|+++
T Consensus 282 ~~~~ll~ 288 (316)
T cd05574 282 GAAEIKQ 288 (316)
T ss_pred hHHHHHc
Confidence 777665
No 296
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.9e-34 Score=302.24 Aligned_cols=255 Identities=26% Similarity=0.408 Sum_probs=202.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|+||.||+|.+..+++.||+|.++.... ...+.+..|+++++.++|+||+++++++.. .+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH-----REKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec-----CCEEE
Confidence 58889999999999999999988999999999975544 356788999999999999999999998644 37789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999998654 278899999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC---CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE---ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.......... ........++..|+|||++.+.. ++.++||||||+++|++++|+.||....... ........
T Consensus 147 ~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~ 221 (264)
T cd06626 147 VKLKNNTTTM----GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGA 221 (264)
T ss_pred cccCCCCCcc----cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhc
Confidence 8765433111 01022345788999999988766 8899999999999999999999996432111 11000000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. ..+. .+....+...+.+++.+||+.+|++|||+.|++.
T Consensus 222 ---~-----~~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 ---G-----HKPP----------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ---C-----CCCC----------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 0000 0001123456779999999999999999999874
No 297
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.1e-34 Score=305.57 Aligned_cols=255 Identities=22% Similarity=0.397 Sum_probs=198.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc----------hhhHHHHHHHHHHHhCCCCccceEEEEeeccc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK----------GALKSFLTECEALRSIRHRNLIKIITICSSID 624 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 624 (869)
+|...+.||+|++|.||+|....+|+.||+|.++.... ...+.+..|+.+++.++|||++++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 47788999999999999999988999999998853211 123467889999999999999999998654
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
....++||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+
T Consensus 80 ---~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 80 ---EEYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred ---CCceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 377899999999999999997753 388999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
+++|||.+........ ........|+..|+|||...... ++.++||||||+++|++++|..||.....
T Consensus 148 ~l~d~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---- 217 (272)
T cd06629 148 KISDFGISKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA---- 217 (272)
T ss_pred EEeecccccccccccc------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----
Confidence 9999999976543211 01122345789999999987654 78999999999999999999999863211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........ .......++.. ...+++..+.+++.+||..+|++|||++||++
T Consensus 218 ~~~~~~~~-~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 218 IAAMFKLG-NKRSAPPIPPD------------------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHHHhh-ccccCCcCCcc------------------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11111100 00000001100 01134567889999999999999999999986
No 298
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=316.58 Aligned_cols=288 Identities=22% Similarity=0.273 Sum_probs=210.3
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~l 633 (869)
+...+.||+|+||.||+++++.+|+.||||.++... ....+...+|++++++++|||||+++++-.+.. .--.....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 445678999999999999999999999999997533 334577789999999999999999999744321 011356789
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--CCC--cEEEccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD--HDM--VAHVGDF 709 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~Df 709 (869)
|||||.+|||..++.+... ...+++.+.+.+..+++.||.|||++ |||||||||.||++- .+| ..||+||
T Consensus 95 vmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 9999999999999987553 34699999999999999999999999 999999999999983 334 5899999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh-
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS- 787 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~- 787 (869)
|.|+.++++. .....+||..|.+||.+.. +.|+..+|.|||||++|+++||..||..........+-..
T Consensus 169 G~Arel~d~s---------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~ 239 (732)
T KOG4250|consen 169 GAARELDDNS---------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH 239 (732)
T ss_pred cccccCCCCC---------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence 9999887653 3455789999999999984 7889999999999999999999999976433221111111
Q ss_pred -hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC--CHHHHHHHHHHHHHh
Q 002897 788 -KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM--QMRDVVVKLCAAREA 860 (869)
Q Consensus 788 -~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~ 860 (869)
....+.......+++..+.......... ...........+..++..++.++|++|- ...+..+.+..|...
T Consensus 240 ~~tkkp~~v~i~~~~~eNgpv~~s~~lP~--p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 240 IITKKPSGVAIGAQEEENGPVEWSSTLPQ--PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred hhccCCCceeEeeecccCCceeeeccCCC--cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 1111122222222222211111111111 0111122334567788889999999999 777777777766543
No 299
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.8e-34 Score=305.51 Aligned_cols=249 Identities=21% Similarity=0.323 Sum_probs=199.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
.|...++||+|++|.||+|.+..+++.+|+|+++.......+.+.+|+.+++.++||||+++++++.. .+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~-----~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV-----GDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc-----CCeEEEE
Confidence 45556899999999999999988999999999876555555678899999999999999999998654 3778999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
+||+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 9999999999998773 288999999999999999999999 999999999999999999999999998875
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
..... .......|+..|+|||...+..++.++|||||||++|+|++|+.||..... . ..........
T Consensus 165 ~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~----~-~~~~~~~~~~ 231 (285)
T cd06648 165 VSKEV--------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP----L-QAMKRIRDNL 231 (285)
T ss_pred hccCC--------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH----H-HHHHHHHhcC
Confidence 43321 112234588999999999888899999999999999999999999864211 1 1111110000
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+.. .....++..+.+++.+||+.+|++|||+.|+++
T Consensus 232 -----~~~~----------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 232 -----PPKL----------------KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -----CCCC----------------cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000 000123456889999999999999999999986
No 300
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.3e-34 Score=302.23 Aligned_cols=261 Identities=22% Similarity=0.315 Sum_probs=205.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||.|+||+||+|....++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+.. ....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEEE
Confidence 47899999999999999999998899999999986432 2355788999999999999999999998654 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999976432 11389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
..+....... ........|+..|+|||++... .++.++|||||||++|+|++|+.||....... .........
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~- 223 (267)
T cd06610 150 ASLADGGDRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND- 223 (267)
T ss_pred HHhccCcccc----ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-
Confidence 8765543211 0122344688999999998776 78999999999999999999999997532211 111111100
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+... ........+..+.+++.+||+.||++|||++|+++
T Consensus 224 --------~~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 --------PPSLE-------------TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------CCCcC-------------CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 00001234567889999999999999999999975
No 301
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.9e-34 Score=306.24 Aligned_cols=274 Identities=20% Similarity=0.255 Sum_probs=202.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 5888999999999999999998899999999987543 3345678999999999999999999998754 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+ +++|.+++..... ++++.+++.++.||++||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEER-----PLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 9999999876543 489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......|+..|+|||.+.+. .++.++||||+||++|||++|.+||...... ...........
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~ 218 (286)
T cd07832 147 RLFSEEEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLG 218 (286)
T ss_pred ccccCCCC-------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcC
Confidence 86644321 112334689999999988654 4689999999999999999998887643211 11111111100
Q ss_pred cc---ccccccCccchhhhhhcccccCCCc--cchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PE---KVMEIVDPSLLLEVRANNSMSRGGE--RVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~---~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. ...+..+..-.... ........ ....++....+.+++.+|++.+|++|||++++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKI---TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CCChHHHhhccCcchhhcc---cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 00000000000000 00000000 00111334778899999999999999999999863
No 302
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.3e-34 Score=303.63 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=200.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
-|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++... ...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEEE
Confidence 4778899999999999999998899999999986432 33456788999999999999999999987543 77899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 80 v~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 99999999999998653 388999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
...... .......++..|+|||...+..++.++|||||||++|+|++|..||...... .........
T Consensus 150 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~ 216 (277)
T cd06641 150 QLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFLIPKN 216 (277)
T ss_pred ecccch--------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHHHhcC
Confidence 654321 1122345788999999998888899999999999999999999998642211 111111000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. . .....++..+.+++.+||+.+|++||++.|+++.
T Consensus 217 ~~-~----------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 NP-P----------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CC-C----------------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 0 0011234567899999999999999999999984
No 303
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.3e-34 Score=307.95 Aligned_cols=263 Identities=19% Similarity=0.247 Sum_probs=200.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+.. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 36889999999999999999999999999999986543 2334677899999999999999999998654 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 899999999999999997654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc-------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 711 LAKFLPARPLDTVV-------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 711 ~a~~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
.++........... ..........|+..|+|||.+.+..++.++|||||||++||+++|+.||.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~----- 221 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----- 221 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 98742211100000 000111234578899999999888899999999999999999999999864221
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.++......... ..+. .....+..+.+++.+||+.||++||++.++.+.++.
T Consensus 222 ~~~~~~~~~~~~---~~~~------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 222 EELFGQVISDDI---EWPE------------------GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHHHHHHhccc---CCCC------------------ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 111111110000 0000 001234567899999999999999996555555443
No 304
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=343.47 Aligned_cols=257 Identities=25% Similarity=0.376 Sum_probs=206.6
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..+-+++...+||.|.||.||.|....+|...|+|.+.... ....+...+|..++..++|||+|+++|+-.+.
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR----- 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR----- 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-----
Confidence 34457788899999999999999999999999999886433 33456778999999999999999999985543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..+|.||||++|+|.+.+...+. .++.....+..|++.|++|||++ |||||||||.||+++.+|.+|++|
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~D 1377 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGD 1377 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeec
Confidence 778999999999999999988763 56667778899999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC---CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE---ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
||.|..+..... ..+.......||+.|||||++.+.. ...++||||+|||+.||+||+.||.....+....-.
T Consensus 1378 FGsa~ki~~~~~----~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1378 FGSAVKIKNNAQ----TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred ccceeEecCchh----cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 999998876521 1123345678999999999987754 466899999999999999999999764433222211
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... +..++....+-.+++..|+..||++|.++.|+++
T Consensus 1454 V~~gh~---------------------------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 VAAGHK---------------------------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhccCC---------------------------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 111111 1122234556678999999999999999988765
No 305
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.4e-34 Score=300.46 Aligned_cols=252 Identities=30% Similarity=0.516 Sum_probs=200.7
Q ss_pred CCCCCeeeeecceEEEEEEECCCC----eEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENG----MLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+++.+.||+|+||.||+|.+...+ ..||+|++...... ..+.+..|+++++.++|+||+++++++... +.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----EP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----Ce
Confidence 457789999999999999998665 89999999654433 567889999999999999999999987653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+++|||+++++|.+++...... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 89999999999999999865421 289999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+......... ......++..|+|||...+..++.++||||+|+++|+|++ |..||.... .......
T Consensus 149 ~~~~~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~ 216 (258)
T smart00219 149 LSRDLYDDDYY-------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-----NEEVLEY 216 (258)
T ss_pred Cceeccccccc-------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH
Confidence 99876544211 1112236789999999988889999999999999999998 788876421 1111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
...... ......++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 217 ~~~~~~-----------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 217 LKKGYR-----------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HhcCCC-----------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 110000 001112456788999999999999999999998764
No 306
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4e-34 Score=300.06 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=186.6
Q ss_pred CeeeeecceEEEEEEECCC--CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGEN--GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.||+|+||.||+|....+ ...+++|.+.... ....+.+.+|+.+++.++||||+++++++... ...++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEe
Confidence 3699999999999976422 3356677765433 33457889999999999999999999987643 67899999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
|+++|+|.+++...... ....++..+..++.||++||+|||+. +++||||||+||+++.++.++|+|||.+....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999865322 12367778889999999999999999 99999999999999999999999999986432
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCC-------CCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-------SEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
... .........++..|+|||+... ..++.++|||||||++|||++ |..||..... .+...
T Consensus 151 ~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~ 219 (268)
T cd05086 151 KED------YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLN 219 (268)
T ss_pred cch------hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH
Confidence 211 0011233457889999998743 245789999999999999997 5667754221 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
....+......++.+.. .....+.+++..|| .+|++||+++||++.|.
T Consensus 220 ~~~~~~~~~~~~~~~~~------------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 220 HVIKDQQVKLFKPQLEL------------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHhhcccccCCCccCC------------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11111111222222111 12345778899999 67999999999998874
No 307
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.1e-35 Score=308.00 Aligned_cols=272 Identities=22% Similarity=0.338 Sum_probs=198.0
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.+.||.|++|.||+|.+..+|..||+|++.... ....+.+.+|+++++.++|||++++++++.+ .+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~-----~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS-----ENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc-----CCeEEE
Confidence 678899999999999999998899999999986433 2334668899999999999999999999654 378999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
+|||++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999995 699999876552 2389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh-c
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV-L 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-~ 791 (869)
...... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||........ .....+.. .
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~ 218 (283)
T cd07835 148 AFGVPV--------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIFRTLGT 218 (283)
T ss_pred ccCCCc--------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCC
Confidence 553321 111223468899999987664 578899999999999999999999865322111 11111110 0
Q ss_pred ccc-cc-c-ccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEK-VM-E-IVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~-~~-~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.. .. . ...+.....+.. ..........+..+..+.+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 219 PDEDVWPGVTSLPDYKPTFPK---WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CChHHhhhhhhchhhhhhccc---ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 00 0 000000000000 0000000111123457889999999999999999999975
No 308
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.5e-34 Score=315.94 Aligned_cols=280 Identities=19% Similarity=0.213 Sum_probs=203.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 628 (869)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.++++++||||+++++++.... +.+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999999999999999998532 2334466788999999999999999999875432 2334
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+. ++|.+++... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 56899999995 4888887542 78889999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ........
T Consensus 162 fg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~ 231 (353)
T cd07850 162 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIE 231 (353)
T ss_pred CccceeCCCCC---------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 99998654321 122345788999999999989999999999999999999999999643211 01111110
Q ss_pred hhc--ccccccccCccchhhhhhcccc-------------cCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVL--PEKVMEIVDPSLLLEVRANNSM-------------SRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~--~~~~~~~~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... +..+.+..++............ ............+..+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0001111111000000000000 0000000011345667899999999999999999999864
No 309
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-34 Score=302.14 Aligned_cols=238 Identities=25% Similarity=0.448 Sum_probs=188.6
Q ss_pred CeeeeecceEEEEEEECCCC----------eEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 560 NMVGQGSFGTVFKGIIGENG----------MLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+.||+|+||.||+|.+..++ ..|++|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46899999999999997666 35888887644433 5788999999999999999999998754 3
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-------
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM------- 702 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------- 702 (869)
..++||||+++|+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 46899999999999999987653 389999999999999999999999 999999999999999888
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHc-CCCCCCcCccC
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFS-RRRPTDSMFHE 779 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~t-g~~pf~~~~~~ 779 (869)
.+||+|||.+...... ....++..|+|||++.+. .++.++|||||||++|++++ |..||......
T Consensus 146 ~~kl~Dfg~a~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~ 213 (259)
T cd05037 146 FIKLSDPGIPITVLSR------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS 213 (259)
T ss_pred eEEeCCCCcccccccc------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch
Confidence 7999999999764331 123467789999998876 78999999999999999999 57777543211
Q ss_pred CchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 780 GLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
....+.. ... .... .....+.+++.+||..+|++|||+.||++.|
T Consensus 214 --~~~~~~~---~~~--~~~~-----------------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 214 --EKERFYQ---DQH--RLPM-----------------------PDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred --hHHHHHh---cCC--CCCC-----------------------CCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1111100 000 0000 0014678999999999999999999999876
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.5e-34 Score=305.31 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=198.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCC---CCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIR---HRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 630 (869)
.|+..+.||+|+||.||+|.+..+++.||+|.++.. .....+.+.+|+.+++.++ |||++++++++.. ...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~-----~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK-----GPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-----CCE
Confidence 477889999999999999999889999999998643 3344567889999999996 9999999998654 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++... .+++..++.++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+....... .......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||...... .....
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~ 213 (277)
T cd06917 147 VAALLNQNS--------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMML 213 (277)
T ss_pred ceeecCCCc--------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhc
Confidence 998765432 112234588999999988654 4689999999999999999999999643211 11000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... ...+.+ .....+.++.+++.+||+.||++||++.|++..
T Consensus 214 ~~~-----~~~~~~-----------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 214 IPK-----SKPPRL-----------------EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ccc-----CCCCCC-----------------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 000 000000 000134568899999999999999999999873
No 311
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=9.5e-35 Score=314.98 Aligned_cols=284 Identities=23% Similarity=0.291 Sum_probs=205.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++||||+++.+++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 478999999999999999999999999999999986432 234567788999999999999999998765432 33467
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||++ |+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999995 69999987543 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+......... .........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .... ....
T Consensus 153 ~~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~-~~~~ 226 (334)
T cd07855 153 MARGLSSSPTE----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLK-LILS 226 (334)
T ss_pred cceeecccCcC----CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHH-HHHH
Confidence 99765443211 1112234568899999998765 45899999999999999999999999653211 0111 1111
Q ss_pred hccccccccc----CccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIV----DPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......+.. +......................+..+..+.+++.+||+.+|++|||++|++..
T Consensus 227 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 227 VLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000000 000000000000000000001112346778999999999999999999999874
No 312
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.2e-34 Score=307.08 Aligned_cols=282 Identities=19% Similarity=0.258 Sum_probs=200.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.+++.+. ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36889999999999999999999899999999986432 223467888999999995 699999999877653333445
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDF 709 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Df 709 (869)
.++||||+++ ++.+++...... ....+++..++.++.||++||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999985 899888764321 123489999999999999999999999 9999999999999998 889999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+....... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||........ ......
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~ 226 (295)
T cd07837 156 GLGRAFSIPV--------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFK 226 (295)
T ss_pred ccceecCCCc--------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHH
Confidence 9987653321 11122346888999998765 4578999999999999999999999865321111 111111
Q ss_pred hhc-cc--ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVL-PE--KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~-~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... +. ......+........ ...........+..+..+.+++.+||+.||++||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEFP---QWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhcC---cccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 00 000000000000000 00000000111234567889999999999999999999975
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3e-34 Score=307.39 Aligned_cols=247 Identities=22% Similarity=0.332 Sum_probs=196.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..|+..+.||+|+||+||+|....+|+.||+|++.... ....+.+.+|+++++.++||||+++.+++... +.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~-----~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE-----HT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC-----Ce
Confidence 46889999999999999999998899999999986432 23346788999999999999999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||++ |++.+++..... .+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999996 588777765433 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
.+...... ....++..|+|||++. ...++.++||||||+++|||++|+.||...... ....
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~----~~~~ 224 (307)
T cd06607 161 SASLVSPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALY 224 (307)
T ss_pred cceecCCC------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH----HHHH
Confidence 98754322 2245788999999874 456889999999999999999999998643211 0000
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... .+ ......++..+.+++.+||+.+|++||++.+++..
T Consensus 225 -~~~~~~-----~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 225 -HIAQND-----SP-----------------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -HHhcCC-----CC-----------------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000 00 00112345678899999999999999999999874
No 314
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=312.47 Aligned_cols=255 Identities=25% Similarity=0.375 Sum_probs=206.9
Q ss_pred CCCCCeeeeecceEEEEEEECCC---CeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
....+.||+|.||+|++|.|... ...||||.++..... ....|.+|+.+|.+|+|+|++++||+..+ ...
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QPA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------chh
Confidence 34557999999999999999632 246899999755443 67899999999999999999999999654 457
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
.+|||.++.|+|.+.+++... ..+.......++.|||.||.||.++ ++||||+..+|+++-....|||+|||+
T Consensus 186 mMV~ELaplGSLldrLrka~~----~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGL 258 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKK----AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGL 258 (1039)
T ss_pred hHHhhhcccchHHHHHhhccc----cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccc
Confidence 899999999999999998332 2488889999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+.++.......+ .....-...|+|||.+....++.++|||+|||++|||+| |+.||-+.... ++
T Consensus 259 mRaLg~ned~Yvm-----~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----qI---- 324 (1039)
T KOG0199|consen 259 MRALGENEDMYVM-----APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----QI---- 324 (1039)
T ss_pred eeccCCCCcceEe-----cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----HH----
Confidence 9998876644322 222334678999999999999999999999999999999 88898653211 11
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.+.+|. +...+.++.|++++++++..||...|++|||+..+.+.+-.
T Consensus 325 -----L~~iD~--------------~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 325 -----LKNIDA--------------GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred -----HHhccc--------------cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 111121 11223445789999999999999999999999999865543
No 315
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-34 Score=306.33 Aligned_cols=269 Identities=18% Similarity=0.264 Sum_probs=190.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCC---CeEEEEEEeecccchhh-----------HHHHHHHHHHHhCCCCccceEEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQKGAL-----------KSFLTECEALRSIRHRNLIKIIT 618 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 618 (869)
.++|.+.++||+|+||+||+|.+..+ +..+|+|+......... .....+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999999766 66778886543222110 11123334455678999999998
Q ss_pred EeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 619 ICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 619 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
++.... ......++++|++.. ++.+.+.... ..++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKLVE-NTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEec-CCceEEEEEEehhcc-CHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 765431 122355788888744 6777665543 257888999999999999999999 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
+.++.++|+|||+|+.......... ..........||+.|+|||+..+..++.++|||||||++|||++|+.||.....
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~ 238 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGH 238 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccc-cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999987643221110 001122334699999999999999999999999999999999999999976432
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
............. . ...... .....++..+.+++..|++.+|++||+++++.+.+
T Consensus 239 ~~~~~~~~~~~~~-~---~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 239 NGNLIHAAKCDFI-K---RLHEGK-----------------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred chHHHHHhHHHHH-H---Hhhhhh-----------------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 2211111110000 0 000000 01113456788999999999999999999998875
No 316
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-34 Score=306.83 Aligned_cols=245 Identities=27% Similarity=0.309 Sum_probs=199.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-----DSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc-----CCe
Confidence 46889999999999999999999899999999986432 2345678899999999999999999998654 377
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 899999999999999998764 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... .....|++.|+|||.+.+...+.++||||||+++|+|++|+.||..... .......
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~ 210 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYEKI 210 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 98765432 1234588999999999888889999999999999999999999864321 1111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
..... ..+......+.+++.+||+.||++|| +++|+++
T Consensus 211 ~~~~~------------------------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 211 LEGKV------------------------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred hcCCc------------------------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 00000 00011234677999999999999999 7777764
No 317
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=283.04 Aligned_cols=268 Identities=19% Similarity=0.286 Sum_probs=209.1
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccc
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSID 624 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 624 (869)
+.++.+-++ +.||+|+|+.|-.+....+|..||||++++.......+..+|++++... .|+||+.+++|+
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF---- 145 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF---- 145 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh----
Confidence 455555554 5899999999999999999999999999888777788999999999998 699999999994
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC--
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-- 702 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 702 (869)
+++...|+|||-|.||+|...+.+..- +++.++.++..+|+.||.|||.+ ||.|||+||+|||.....
T Consensus 146 -Edd~~FYLVfEKm~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 146 -EDDTRFYLVFEKMRGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred -cccceEEEEEecccCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 556889999999999999999988763 89999999999999999999999 999999999999997655
Q ss_pred -cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 703 -VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 703 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
-+|||||.++.-+.....-. ..........+|+..|||||+.. ...|+.++|.||+|||+|-|+.|.+||.+.
T Consensus 216 sPvKiCDfDLgSg~k~~~~~s-pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCS-PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred CceeeeccccccccccCCCCC-CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 58999999887654332211 12223445678999999999742 235899999999999999999999999875
Q ss_pred ccCCchHHH------hhhhh---cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 777 FHEGLTLHE------FSKMV---LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 777 ~~~~~~~~~------~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
-.++..+.+ .-+.. +.+...+..| .....++.+..+++...+..||.+|.++
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPd-------------------kdWahIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPD-------------------KDWAHISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHhccCCcCCh-------------------hhhHHhhHHHHHHHHHHHhccHHhhhhh
Confidence 443222111 00000 1111111111 1223456677889999999999999999
Q ss_pred HHHHH
Q 002897 848 RDVVV 852 (869)
Q Consensus 848 ~evl~ 852 (869)
.+++.
T Consensus 356 ~~vln 360 (463)
T KOG0607|consen 356 AQVLN 360 (463)
T ss_pred hhccC
Confidence 99887
No 318
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=3e-34 Score=304.36 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=204.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++.|+..+.||+|++|.||+|.+..++..||+|++..... ..+.+.+|+++++.++|+|++++++++... ...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG-----DEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC-----CEE
Confidence 45678888999999999999999988899999999976544 457788999999999999999999987653 788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++|+||+++++|.+++..... .+++..+..++.|++.||+|||+. |++|+|++|+||+++.++.++|+|||.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNFV-----RMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 999999999999999987641 389999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..... ..
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~----~~~~~-~~ 229 (286)
T cd06614 163 AAQLTKEK--------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL----RALFL-IT 229 (286)
T ss_pred hhhhccch--------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH----HHHHH-HH
Confidence 87554321 1122345788999999998888999999999999999999999998642111 11000 00
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... ......++..+.+++.+||+.+|.+|||+.|+++.
T Consensus 230 ~~~~~~---------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 230 TKGIPP---------------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred hcCCCC---------------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 000000 00111245678899999999999999999999863
No 319
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.5e-34 Score=298.43 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=196.1
Q ss_pred HHHHHHHhcCCCCCCee--eeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeec
Q 002897 546 YAKLSKATSEFSSSNMV--GQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSS 622 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 622 (869)
..+.....++|++.+.+ |+|+||.||++....+++.+|+|++....... .|+.....+ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec
Confidence 34455556788888877 99999999999999999999999986432211 123333223 79999999998765
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
. +..++||||+++|+|.+++.... ++++.++..++.|+++|++|||+. +++||||||+||+++.++
T Consensus 81 ~-----~~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 81 L-----KGHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred C-----CeeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 3 68999999999999999998764 389999999999999999999999 999999999999999998
Q ss_pred -cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 703 -VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 703 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
.++|+|||.+...... ....|+..|+|||++.+..++.++||||+||++|+|++|+.||.....+..
T Consensus 147 ~~~~l~dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~ 214 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL 214 (267)
T ss_pred CeEEEecCccceecCCC------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh
Confidence 9999999998765332 123578999999999988899999999999999999999999975433322
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-MRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 852 (869)
....+.... .. ........+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 215 ~~~~~~~~~-~~------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 215 DLESLLKRQ-QK------------------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hHHHHHHhh-cc------------------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 222222211 00 00011134556889999999999999996 588874
No 320
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.7e-35 Score=308.74 Aligned_cols=277 Identities=23% Similarity=0.344 Sum_probs=201.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|++|.||+|.+..+++.||+|+++.. .....+.+.+|++++++++|+||+++++++.. .+..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 3688999999999999999999989999999998643 23345778999999999999999999999765 3678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++++.+..+..... .+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||.
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 99999999877766654432 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ .......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+ .........
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~ 218 (288)
T cd07833 147 ARALRARPA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCL 218 (288)
T ss_pred ccccCCCcc-------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 987654321 122334678899999999888 78999999999999999999999987432211 000000000
Q ss_pred --ccccccccc--CccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 --LPEKVMEIV--DPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 --~~~~~~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+....... ++....................+..++..+.+++.+||+.+|++|||++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 219 GPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000000000 00000000000000000000011123677899999999999999999999875
No 321
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.5e-34 Score=308.81 Aligned_cols=280 Identities=19% Similarity=0.241 Sum_probs=195.5
Q ss_pred Ceeeee--cceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQG--SFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
..||+| +||+||+|.+..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++... +..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG-----SWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC-----CceEEEE
Confidence 356666 89999999999899999999986432 33457789999999999999999999997653 6789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+.++++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999887542 1388999999999999999999999 9999999999999999999999999866433
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
......... .........++..|+|||++.+. .++.++||||+||++|+|++|+.||....................
T Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd08226 152 VRNGQKAKV-VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSP 230 (328)
T ss_pred hccCccccc-cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCC
Confidence 221110000 00111122356779999998764 478999999999999999999999975432211111111000000
Q ss_pred c--------cccccCcc------chhhhhhc----ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 K--------VMEIVDPS------LLLEVRAN----NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~--------~~~~~d~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .....+.. ........ ..............+...+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 00000000 00000000 000000111223456778999999999999999999999986
No 322
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.2e-34 Score=300.51 Aligned_cols=251 Identities=20% Similarity=0.324 Sum_probs=200.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|+||.||+|.+..+|..||+|.+.... ....+.+.+|+++++.++|+||+++++++.. ....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~-----~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE-----NGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc-----CCeEE
Confidence 4788899999999999999999999999999986532 2334677899999999999999999998654 37889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 711 (869)
+|+||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999976442 2378999999999999999999999 999999999999999886 569999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......|+..|+|||+..+..++.++||||||+++|++++|+.||.... ..+......
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 215 (257)
T cd08225 149 ARQLNDSM--------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKIC 215 (257)
T ss_pred chhccCCc--------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHh
Confidence 97664322 11123458899999999988889999999999999999999999986422 111111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... . ....+..+.+++.+||+.+|++|||+.|+++.
T Consensus 216 ~~~~~~-~----------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 216 QGYFAP-I----------------------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred cccCCC-C----------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111100 0 01233467899999999999999999999763
No 323
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.1e-34 Score=299.83 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=198.7
Q ss_pred CCCCCCeeeeecceEEEEEEECC-CCeEEEEEEeecc----------cchhhHHHHHHHHHHHh-CCCCccceEEEEeec
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGE-NGMLVAVKVLNLM----------QKGALKSFLTECEALRS-IRHRNLIKIITICSS 622 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 622 (869)
+|++.+.||+|+||.||+|.+.. .++.+|+|.+... ......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999986 6789999988532 22234567788888875 699999999998654
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~ 701 (869)
.+..++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ . +++|+||+|+||+++.+
T Consensus 81 -----~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 -----NDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred -----CCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 37899999999999999988542211 1248999999999999999999996 5 89999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
+.++|+|||.+....... ......|+..|+|||...+..++.++||||||+++|+|++|+.||.....
T Consensus 151 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--- 218 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--- 218 (269)
T ss_pred CcEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH---
Confidence 999999999997654331 12334588999999999988899999999999999999999999864211
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
............... .....+..+.+++.+||+.||++||++.||.++++
T Consensus 219 --~~~~~~~~~~~~~~~----------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 219 --LSLATKIVEAVYEPL----------------------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --HHHHHHHhhccCCcC----------------------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111111110000000 00123456789999999999999999999998875
No 324
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-34 Score=302.05 Aligned_cols=248 Identities=24% Similarity=0.342 Sum_probs=201.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++. +....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-----DEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-----CCCeE
Confidence 4788899999999999999998899999999996432 234678899999999999999999998854 34789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++|+||+++++|.+++.... ++++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999997753 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ..........
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~ 215 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQE 215 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhc
Confidence 87654331 122345788999999998888999999999999999999999999754321 1111111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM--RDVV 851 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 851 (869)
. .....++..+..+.+++.+||+.||.+||++ +|++
T Consensus 216 ~------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 216 T------------------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred c------------------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0 0001112334678899999999999999999 6654
No 325
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=306.71 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=207.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
....|.+.+.||+|.|+.|.+|++..++..||+|.+++..- .....+.+|+++|+.++|||||+++.+... ..
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-----~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIET-----EA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeee-----cc
Confidence 35679999999999999999999999999999999976542 233558999999999999999999999654 48
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+||||+.+|.+++|+..... ..+..+..++.|+.+|++|+|++ .|||||||++||+++.+..+||+||
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred eeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 89999999999999999998764 56688999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|++..+... .......|++.|.|||++.+.+| ++++|+||+|+++|.|+.|..||++..-. ....
T Consensus 200 gfS~~~~~~---------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk-----~Lr~ 265 (596)
T KOG0586|consen 200 GFSTFFDYG---------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK-----ELRP 265 (596)
T ss_pred ccceeeccc---------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc-----cccc
Confidence 999887644 34456789999999999999876 78999999999999999999999853211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.+......- +.-...++.+++++++-.+|.+|++++++++.-
T Consensus 266 rvl~gk~rI------------------------p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 266 RVLRGKYRI------------------------PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred hheeeeecc------------------------cceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 111111100 001223466899999999999999999998743
No 326
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=277.10 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=198.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++.+...-||.|.-|+||+++.+.+|...|||.+... .+++.+++...++++.+- ++|+||+.+|||... ...
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n-----~dV 166 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITN-----TDV 166 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeC-----chH
Confidence 3445667899999999999999999999999999654 456678888888887666 599999999998653 567
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++.||.|.. -+...+++-.. ++++.-+-++...+++||.||.++. +|+|||+||+|||+|+.|++|+||||+
T Consensus 167 ~IcMelMs~-C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 167 FICMELMST-CAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred HHHHHHHHH-HHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccc
Confidence 889998843 45556655443 4888888899999999999999876 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC---CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS---EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
+..+-+.. ..+...|.+.|||||.+.-. .|+-++||||||+.++|+.||+.||.....+-..+.....
T Consensus 239 sGrlvdSk---------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln 309 (391)
T KOG0983|consen 239 SGRLVDSK---------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN 309 (391)
T ss_pred cceeeccc---------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh
Confidence 98765542 23455799999999987654 5889999999999999999999999864433333322222
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .|.+.+. ...+..+.+++..|++.|+.+||...++++
T Consensus 310 ~e---------PP~L~~~----------------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 310 EE---------PPLLPGH----------------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cC---------CCCCCcc----------------cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 11 1111111 124567889999999999999999998876
No 327
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.9e-34 Score=306.98 Aligned_cols=279 Identities=22% Similarity=0.300 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|.+..+|+.||+|+++.... .....+.+|+.++++++|+|++++++++... ..+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 4689999999999999999999998999999999864332 2234567899999999999999999987542 2256
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++ +|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~~-~l~~~l~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDNMPT-----PFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 7999999964 89888876542 489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-~~~~~~~~~ 224 (309)
T cd07845 154 LARTYGLPA--------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-EQLDLIIQL 224 (309)
T ss_pred eeeecCCcc--------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 998664421 11122345788999998865 45789999999999999999999999753221 111111111
Q ss_pred hcc--cccc-cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLP--EKVM-EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~--~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... .... ...+......+....... ...........+.+.+++.+|++.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFTLPKQPY-NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cCCCChhhchhhhcccccccccccCCCC-CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000 0000 000000000000000000 00000011235667899999999999999999999864
No 328
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.2e-35 Score=284.39 Aligned_cols=210 Identities=23% Similarity=0.339 Sum_probs=175.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC----eEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG----MLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
...|+.+..||+|.||.||+|..+.+. ..+|+|.++... .+......+|+..++.++|||++.+..++...
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~--- 99 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH--- 99 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---
Confidence 346899999999999999999665332 378999996542 23456778999999999999999999987543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC----C
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD----M 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~ 702 (869)
+...++++||.+. +|.+.++-.+.... ..++...+..|+.||+.|+.|||++ =|+|||+||.||||..+ |
T Consensus 100 -d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 100 -DKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred -CceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 4789999999987 99999987665433 4689999999999999999999999 69999999999999888 8
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
.|||+|||+|+.+...-. .-.....++-|.+|+|||.+.|. .||++.||||.|||+.||+|-++.|.+.
T Consensus 174 ~VKIaDlGlaR~~~~plk-----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPLK-----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred eeEeecccHHHHhhcccc-----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999999999998865431 11234567789999999998876 5899999999999999999999988653
No 329
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.1e-34 Score=304.15 Aligned_cols=274 Identities=20% Similarity=0.301 Sum_probs=200.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+|++.++||.|++|.||+|++..+|+.||+|+++.... ...+.+.+|++++++++||||+++++++.+. +..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEEE
Confidence 58889999999999999999998999999999875432 2346678899999999999999999997653 67899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++ +|.+++..... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCCc-cHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 9999975 89998876542 12489999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc-
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL- 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~- 791 (869)
...... .......++..|+|||++.+. .++.++|||||||++|++++|+.||......+ ..........
T Consensus 149 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~ 219 (284)
T cd07836 149 AFGIPV--------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGT 219 (284)
T ss_pred hhcCCc--------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 553321 111233568899999987664 46889999999999999999999997543221 1111111100
Q ss_pred --ccccccccCcc-chhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 --PEKVMEIVDPS-LLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 --~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...+....+.. ...... ...........+..+..+.+++.+|++.||++||+++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 220 PTESTWPGISQLPEYKPTFP---RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CChhhHHHHhcCchhccccc---CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000 000000 00000000111234567889999999999999999999975
No 330
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=6e-34 Score=300.25 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=186.3
Q ss_pred eeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHh---CCCCccceEEEEeeccccCCCceEEEE
Q 002897 561 MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRS---IRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
.||+|+||.||+|.+..+++.||+|.+.... ......+.+|..+++. .+||+|+.+.+++... +..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP-----DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC-----CeEEEE
Confidence 4899999999999998899999999986432 1122334455544443 4799999999886543 678999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999987654 389999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
..... .....|+..|+|||...+ ..++.++||||+||++|+|++|..||....... ..........
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~- 213 (279)
T cd05633 147 FSKKK----------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLT- 213 (279)
T ss_pred ccccC----------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC--HHHHHHHhhc-
Confidence 43221 122458999999998864 558999999999999999999999997532211 1111111100
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVK 853 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 853 (869)
.+ ...++..+..+.+++.+||+.||++|| |++|+++.
T Consensus 214 -----~~------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 214 -----VN------------------VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----CC------------------cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 00 001123455688999999999999999 59988774
No 331
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.1e-33 Score=300.46 Aligned_cols=277 Identities=21% Similarity=0.300 Sum_probs=200.9
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhC---CCCccceEEEEeeccccCCCce
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSI---RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 630 (869)
|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+.+++++ +|||++++++++...+..+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 677889999999999999998889999999996432 22234566788877666 6999999999987754334445
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+++|||+.+ +|.+++..... ..+++..++.++.|+++||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 8999999974 89998876542 1489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+....... ......++..|+|||++.+..++.++|||||||++|+|++|++||...... .....+....
T Consensus 153 ~~~~~~~~~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~ 222 (287)
T cd07838 153 LARIYSFEM---------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVI 222 (287)
T ss_pred cceeccCCc---------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHc
Confidence 997764331 112234788999999999889999999999999999999999998753221 1122221111
Q ss_pred cc-cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LP-EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ................. ............+....+.+++.+||+.||++||++.|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFP--SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCChHhcCCCcccchhhcc--cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 00000000000000000 00000001112345577889999999999999999999975
No 332
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.7e-34 Score=297.86 Aligned_cols=254 Identities=19% Similarity=0.290 Sum_probs=199.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-----cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-----QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|++++++++|+||+++++++.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 4789999999999999999999989999999987532 233456788999999999999999999987543 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 56789999999999999997643 278899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.++....... .........|+..|+|||++.+..++.++|||||||++|++++|+.||..... ......
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~ 220 (264)
T cd06653 150 FGASKRIQTICM-----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFK 220 (264)
T ss_pred cccccccccccc-----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHH
Confidence 999986533211 00112234688999999999888899999999999999999999999864311 111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ..... ...+....+.+.+++.+|++ +|..||++.+++.
T Consensus 221 ~~-~~~~~----------------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 221 IA-TQPTK----------------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HH-cCCCC----------------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 10 00000 01112344568899999999 5799999998865
No 333
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.7e-34 Score=305.31 Aligned_cols=286 Identities=20% Similarity=0.306 Sum_probs=200.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC---
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN--- 626 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 626 (869)
..++|++.++||+|+||.||+|.+..+++.||||.+.... ......+.+|++++++++||||+++++++......
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3457999999999999999999999899999999986432 22234567899999999999999999998654221
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
.....++||||+++ ++.+++..... .+++.+++.++.|++.||+|||++ +++|+||||+||+++.++.+||
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKNV-----KFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 23456999999964 88888866532 389999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
+|||.+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ....
T Consensus 161 ~dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~ 234 (310)
T cd07865 161 ADFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLT 234 (310)
T ss_pred CcCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 9999998664432110 1122334578899999987664 4788999999999999999999998653221 1111
Q ss_pred hhhhh---cccc-cccccCccchhhhhhccccc-CCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMV---LPEK-VMEIVDPSLLLEVRANNSMS-RGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~---~~~~-~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... .+.. .....+.............. ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 235 LISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 11111 0000 00000000000000000000 00000000001245678999999999999999999975
No 334
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.5e-34 Score=306.11 Aligned_cols=275 Identities=20% Similarity=0.268 Sum_probs=199.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||.||+|.+..+++.+|+|.++.... .....+.+|+.++++++||||+++++++... +....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 578999999999999999999998999999999964432 2234567899999999999999999987543 23679
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++ +|.+++..... .+++..++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcCc-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 999999974 99999876543 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+....... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||....... .........
T Consensus 153 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~ 223 (293)
T cd07843 153 AREYGSPL--------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLL 223 (293)
T ss_pred eeeccCCc--------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 98665432 112234578899999988764 46899999999999999999999997532211 111111100
Q ss_pred cc---cccccccCccchhhhhhcccccCCC--ccchHHH--HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LP---EKVMEIVDPSLLLEVRANNSMSRGG--ERVKIEE--CLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~---~~~~~~~d~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ..+....+-..... ........ ....... ....+.+++.+||+.+|++|||+.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 224 GTPTEKIWPGFSELPGAKK---KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CCCchHHHHHhhccchhcc---cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 00000000000000 00000000 0000011 2556789999999999999999999975
No 335
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.8e-34 Score=296.44 Aligned_cols=250 Identities=25% Similarity=0.385 Sum_probs=203.7
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
+|+..+.||+|++|.||+|.+..+++.+++|++........+.+.+|+++++.++|++++++++++... ...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEEEE
Confidence 478889999999999999999888999999999766555667899999999999999999999986543 778999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
+||+++++|.+++..... .+++..+..++.|+++|++|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQ-----TLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 999999999999987632 389999999999999999999998 999999999999999999999999999976
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
...... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....... ..
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~----~~ 213 (253)
T cd05122 148 LSDTKA---------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK-ALFKIAT----NG 213 (253)
T ss_pred cccccc---------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHHh----cC
Confidence 654321 234568899999999988889999999999999999999999987432110 0000000 00
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.....+ ...++..+.+++.+||+.||++|||+.|+++
T Consensus 214 ~~~~~~---------------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 214 PPGLRN---------------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCCcCc---------------------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 0112456889999999999999999999975
No 336
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.4e-34 Score=303.12 Aligned_cols=245 Identities=22% Similarity=0.336 Sum_probs=196.5
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
..+||+|+||.||+|....+|+.||+|++..........+.+|+.+++.++|+|++++++++... +..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-----CEEEEEEecC
Confidence 36899999999999999889999999998655555567789999999999999999999987643 7899999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++.... +++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+......
T Consensus 100 ~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 100 EGGALTDIVTHTR-------MNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence 9999999886432 78999999999999999999999 9999999999999999999999999998755432
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. .......|+..|+|||...+..++.++||||+||++|+|++|+.||...... ..........+....
T Consensus 170 ~--------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~-- 237 (292)
T cd06657 170 V--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPKLK-- 237 (292)
T ss_pred c--------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCcccC--
Confidence 1 1122345789999999998888899999999999999999999998642111 111111111110000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.....+..+.+++.+||+.+|.+||++.|+++
T Consensus 238 ----------------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 ----------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ----------------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 00123445778999999999999999999987
No 337
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.2e-34 Score=310.82 Aligned_cols=288 Identities=20% Similarity=0.246 Sum_probs=209.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++.+++......+....+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999998889999999986543 34457789999999999999999999987664323335789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 48999987654 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh-
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV- 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~- 790 (869)
......... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... .........
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 224 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIVEVLG 224 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHhcC
Confidence 876554210 0122334678899999999887 78999999999999999999999997543211 011111100
Q ss_pred --cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHH
Q 002897 791 --LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK--LCAAR 858 (869)
Q Consensus 791 --~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~ 858 (869)
.+.................................+..+.+++.+||+.+|++|||++|+++. ++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence 000000000000000000000000000000112245678899999999999999999999984 44443
No 338
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5.4e-34 Score=303.74 Aligned_cols=274 Identities=20% Similarity=0.293 Sum_probs=196.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|++|+||+|.+..+|+.||+|.+.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-----EKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec-----CCeE
Confidence 47889999999999999999998899999999986432 2334678899999999999999999999754 3789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg 710 (869)
++||||++ +++.+++..... ..+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999996 588888765432 1367888999999999999999999 9999999999999985 4579999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+....... .......++..|+|||++.+. .++.++||||+||++|+|+||+.||......+.. ......
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~-~~~~~~ 219 (294)
T PLN00009 149 LARAFGIPV--------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDEL-FKIFRI 219 (294)
T ss_pred cccccCCCc--------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHH
Confidence 997554321 112234578899999987664 5789999999999999999999999753221111 110000
Q ss_pred h---cccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 V---LPEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~---~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. ....+....+ ....... ............+..+..+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 220 LGTPNEETWPGVTS---LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hCCCChhhcccccc---chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0000000000 0000000 000000000011123456789999999999999999999986
No 339
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2e-34 Score=313.13 Aligned_cols=282 Identities=22% Similarity=0.288 Sum_probs=199.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc--------
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSID-------- 624 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 624 (869)
.++|.+.+.||.|+||.||+|.+..+|+.||+|.+........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999999999999999997666566678899999999999999999998765431
Q ss_pred -cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CC
Q 002897 625 -FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DM 702 (869)
Q Consensus 625 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~ 702 (869)
+......++||||++ ++|.+++... .+++..++.++.||++||.|||+. +|+||||||+||+++. ++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 112246789999997 5998888643 288999999999999999999999 9999999999999974 55
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
.+|++|||.++....... .........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........
T Consensus 153 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~ 227 (342)
T cd07854 153 VLKIGDFGLARIVDPHYS-----HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ 227 (342)
T ss_pred eEEECCcccceecCCccc-----cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 789999999976533211 0111223457889999997654 4678899999999999999999999965322111
Q ss_pred hHHHhhhhhccc---ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 TLHEFSKMVLPE---KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........... ....... .............+.......+....++.+++.+|++.||++|||+.|++.
T Consensus 228 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 228 -MQLILESVPVVREEDRNELLN-VIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred -HHHHHHhcCCCChHHhhhhhh-hhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 11111000000 0000000 000000000000000000111124466889999999999999999999985
No 340
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-36 Score=280.92 Aligned_cols=285 Identities=22% Similarity=0.337 Sum_probs=211.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEe--ecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc---cCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVL--NLMQKGALKSFLTECEALRSIRHRNLIKIITICSSID---FNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~--~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 628 (869)
+.|....++|+|.||.||+|+.+.+|+.||+|++ .....+......+|++++..++|+|++.++++|.... ..+.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4566778999999999999999999999999876 3334445567789999999999999999999887643 2234
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...|+||.+|+. +|...+..... .++..++.+++.++..||.|+|+. .|+|||+||.|+||+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~v-----r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKV-----RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccc-----cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 458999999987 99999887654 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCc--hHHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL--TLHE 785 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~--~~~~ 785 (869)
||+|+.+..... ........++-|.+|++||.+.|. .|+++.|||+.|||+.||+||.+-+.+..+... .+..
T Consensus 168 FGlar~fs~~~n----~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 168 FGLARAFSTSKN----VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred cccccceecccc----cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 999987654432 112334566779999999987765 699999999999999999999999876543311 1222
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHH------HHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECL------VAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
......++.+.++..-.+..........+ +.....++.. ....+++..++..||.+|+++.|++..
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~--~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPK--GQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCc--chhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 22223333333333222322221111000 0001111111 256789999999999999999999864
No 341
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.2e-33 Score=304.02 Aligned_cols=247 Identities=23% Similarity=0.322 Sum_probs=195.4
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
|...+.||+|+||.||+|++..++..||+|++.... ......+.+|++++++++|||++++++++... ...+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE-----HTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC-----CeEE
Confidence 677889999999999999998899999999986432 23345788999999999999999999997653 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ |++.+++..... ++++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.+
T Consensus 102 lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 102 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred EEEeCCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCc
Confidence 9999996 488887765433 389999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
...... ....|+..|+|||++. .+.++.++|||||||++|+|++|+.||...... .....+...
T Consensus 173 ~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~ 239 (317)
T cd06635 173 SIASPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQN 239 (317)
T ss_pred cccCCc------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhc
Confidence 654321 2235788999999873 456899999999999999999999998642111 001111100
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.. ........+..+.+++.+||+.+|++||++.|+++...
T Consensus 240 ~~--------------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 240 ES--------------------------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred cC--------------------------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00 00011134456889999999999999999999998643
No 342
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.3e-33 Score=304.28 Aligned_cols=210 Identities=21% Similarity=0.354 Sum_probs=172.5
Q ss_pred CCCCCCeeeeecceEEEEEEECC--CCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGE--NGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|++.++||+|++|.||+|.+.. +++.||+|.+.... ......+.+|+.+++.++||||+++++++.+. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47888999999999999999987 79999999997532 34456778999999999999999999997643 236
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC----CCcEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH----DMVAH 705 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~k 705 (869)
..++||||+++ ++.+++....... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 78999999975 7777765433211 12489999999999999999999999 9999999999999999 89999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
|+|||++......... ........++..|+|||++.+. .++.++|||||||++|+|++|++||....
T Consensus 153 l~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 153 IGDLGLARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ECCCccccccCCCccc-----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 9999999866443210 1223345678999999987664 57899999999999999999999997543
No 343
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.7e-34 Score=304.12 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=192.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|...+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. ||||+++++++.. ....+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-----~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-----EGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEec-----CCcEE
Confidence 5666789999999999999999999999999986433 234567889999999995 9999999998654 36788
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
++|||+.. ++.++....... ....+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||++
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEecccC-CHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchh
Confidence 99999864 655543211000 0124899999999999999999999742 8999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC---CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS---EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
....... ......|+..|+|||++.+. .++.++||||+||++|+|++|+.||.... .......+
T Consensus 156 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~~- 222 (288)
T cd06616 156 GQLVDSI---------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN---SVFDQLTQ- 222 (288)
T ss_pred HHhccCC---------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc---hHHHHHhh-
Confidence 7654321 11223578899999998776 68999999999999999999999986432 11111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... .+.+. ......++..+.+++.+||+.+|++|||++||++.
T Consensus 223 ~~~~~-----~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 VVKGD-----PPILS--------------NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hcCCC-----CCcCC--------------CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10000 00000 00001345678899999999999999999999874
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.4e-34 Score=303.69 Aligned_cols=284 Identities=20% Similarity=0.299 Sum_probs=202.8
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccc----
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSID---- 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 624 (869)
...++|++.+.||+|+||.||+|.+..+|+.||+|+++... ......+.+|+++++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999999899999999996533 223356778999999999999999999876542
Q ss_pred -cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 625 -FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 625 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
..+....++|+||+++ ++.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLV-----HFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1223478999999976 77777765432 389999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
+||+|||.+........ .......++..|+|||.+.+. .++.++|||||||++|+|++|++||..... ...
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~ 226 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQ 226 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHH
Confidence 99999999986644321 111223467889999987654 578899999999999999999999974221 111
Q ss_pred HHHhhhhh---cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMV---LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........ .+....+................. ..........+..+.+++.+||+.||++|||++|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 227 LELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYR-RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHhCCCChhhcccccccccccccccccccc-cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111111 000011110000000000000000 0000111124567899999999999999999999975
No 345
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.4e-34 Score=300.53 Aligned_cols=272 Identities=18% Similarity=0.248 Sum_probs=194.5
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.++||+|+||.||+|.+..+++.||+|+++... ........+|+.+++++. |+|++++++++.+. ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 677889999999999999999899999999986432 222234457889999885 99999999997643 2257899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||++ |++.+++..... .+++.+++.++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.+.
T Consensus 78 v~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999996 588888876432 389999999999999999999999 9999999999999999 999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... ......++..|+|||++.+ ..++.++||||+||++|||++|+.||......+ .... ......
T Consensus 148 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~-~~~~~~ 216 (282)
T cd07831 148 GIYSKP---------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAK-IHDVLG 216 (282)
T ss_pred ccccCC---------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHH-HHHHcC
Confidence 654321 1122457889999997644 557889999999999999999999996532211 1111 111100
Q ss_pred cccc---cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVM---EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~---~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ............. ...............+..+.+++.+||+.+|++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 217 TPDAEVLKKFRKSRHMNYNF-PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCHHHHHhhcccccccccC-cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000 0000000000000 000000000111245678999999999999999999999986
No 346
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.7e-33 Score=293.96 Aligned_cols=252 Identities=22% Similarity=0.384 Sum_probs=204.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|.+..++..||+|++..... ...+.+.+|+++++.++|||++++.+.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 57888999999999999999988899999999975432 4567789999999999999999999986543 7889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||+++++|.+++...... ...+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE--GKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 999999999999999875311 12489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..........
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~ 217 (258)
T cd08215 151 KVLSSTV--------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILK 217 (258)
T ss_pred eecccCc--------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhc
Confidence 7654432 11223468889999999988889999999999999999999999986432 1111111111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... .+...+..+.+++.+||..+|++|||+.|+++
T Consensus 218 ~~~~~-----------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 218 GQYPP-----------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCC-----------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 10000 00123456889999999999999999999975
No 347
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-33 Score=303.50 Aligned_cols=270 Identities=19% Similarity=0.210 Sum_probs=191.7
Q ss_pred cceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCH
Q 002897 566 SFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSL 643 (869)
Q Consensus 566 ~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 643 (869)
++|.||.++...+++.||||++... .....+.+.+|+++++.++||||+++++++.. .+..+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~-----~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV-----DSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec-----CCeEEEEEeccCCCCH
Confidence 4455666666668999999998654 34456789999999999999999999998654 3678999999999999
Q ss_pred HHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCc
Q 002897 644 EEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTV 723 (869)
Q Consensus 644 ~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 723 (869)
.+++...... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.+...........
T Consensus 87 ~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 87 EDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9999865321 388999999999999999999999 999999999999999999999999999876543221110
Q ss_pred cccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCc
Q 002897 724 VETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDP 801 (869)
Q Consensus 724 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 801 (869)
..........++..|+|||++.+. .++.++|||||||++|||++|+.||............. ....+ ...+.
T Consensus 160 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~----~~~~~ 233 (314)
T cd08216 160 -VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV-RGTVP----CLLDK 233 (314)
T ss_pred -ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hccCc----ccccc
Confidence 011122344578899999998763 57899999999999999999999997532221111111 10000 00000
Q ss_pred cchhhhh----------hcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 802 SLLLEVR----------ANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 802 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... ...................++.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 234 STYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred CchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000000 000000001111223345678899999999999999999999873
No 348
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.1e-34 Score=309.87 Aligned_cols=284 Identities=20% Similarity=0.280 Sum_probs=202.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.+++++ +||||+++++++... +.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---ND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CC
Confidence 456899999999999999999999888999999988532 223345677899999999 999999999987542 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 56899999997 5999998764 278899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||.+.......... .........|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ......
T Consensus 151 ~g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~ 226 (337)
T cd07852 151 FGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKII 226 (337)
T ss_pred ccchhccccccccc---cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence 99998765432110 0012234568999999998755 457889999999999999999999996532211 111110
Q ss_pred hhhc--ccccccccCccchhhhhh-cccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVL--PEKVMEIVDPSLLLEVRA-NNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~--~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .................. ...............++..+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 227 EVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000 000000000000000000 00000000001111245678999999999999999999999974
No 349
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=7.4e-34 Score=301.85 Aligned_cols=276 Identities=20% Similarity=0.305 Sum_probs=200.7
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.+.||+|++|.||+|.+..+++.+|+|++.... ......+.+|+++++.++|||++++++++...+ ....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 677899999999999999999889999999997653 334467889999999999999999999976431 367899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++ +|.+++..... .+++..++.++.|+++|++|||+. +++|+||+|+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~-~l~~~~~~~~~-----~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMDH-DLTGLLDSPEV-----KFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eeccccc-cHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 9999975 89988876532 389999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc-
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL- 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~- 791 (869)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .......+...
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~ 220 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGS 220 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 6654321 11223456788999997765 35789999999999999999999999753321 11111111110
Q ss_pred --ccccccccCccchhhhhhcccccCCCccchHHH-HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 --PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEE-CLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........+............. .......... ++..+.+++.+||+.+|++||+++++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 221 PTDENWPGVSKLPWFENLKPKKPY-KRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred Cchhhccccccchhhhhccccccc-hhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000000000000000 0000011112 2667899999999999999999999976
No 350
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.6e-34 Score=308.02 Aligned_cols=277 Identities=22% Similarity=0.268 Sum_probs=200.7
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
...+++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++++.++||||+++.+++...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 81 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP---- 81 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC----
Confidence 45678999999999999999999999999999999987532 223346778999999999999999999987542
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++|+||+ +++|.++++... +++..+..++.|+++||+|||+. +|+||||+|+||+++.++.++|+
T Consensus 82 ~~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 82 LEDIYFVTELL-GTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred CCcEEEEeehh-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 25688999998 569998886532 78888999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
|||.+...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .....+
T Consensus 151 dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~~~ 218 (328)
T cd07856 151 DFGLARIQDPQ-----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFSII 218 (328)
T ss_pred ccccccccCCC-----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 99998754321 123357889999998765 56899999999999999999999999653211 000001
Q ss_pred hhhh--cccc-cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMV--LPEK-VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~--~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.+.. .++. .....+......................+..+..+.+++.+|++.+|++|||++|++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 219 TDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1000 0000 11111111000000000000000000111234678899999999999999999999765
No 351
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.4e-33 Score=297.60 Aligned_cols=245 Identities=24% Similarity=0.332 Sum_probs=192.4
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||+||+|.+..+|+.||+|++.... ......+..|+++++.++||||+++++++.. .+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 689999999999999899999999986432 2234566789999999999999999988654 37789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999976542 2489999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
.......++..|+|||+..+..++.++||||+||++|+|++|+.||...... .............
T Consensus 149 ---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~----- 213 (277)
T cd05577 149 ---------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEM----- 213 (277)
T ss_pred ---------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccc-----
Confidence 1122345788999999998888999999999999999999999999653221 1111111111000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
....+...+..+.+++.+||+.||++|| ++.+++.
T Consensus 214 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 214 -------------------AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred -------------------cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 0001112345678999999999999999 6666654
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.3e-33 Score=294.03 Aligned_cols=248 Identities=26% Similarity=0.426 Sum_probs=202.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-----DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-----CEEE
Confidence 57889999999999999999988899999999975543 4567889999999999999999999986543 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++.... .+++..+..++.|++.|+.|||+. |++||||+|+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999997653 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
........ ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........ .
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~ 213 (254)
T cd06627 147 TKLNDVSK--------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-Q 213 (254)
T ss_pred eecCCCcc--------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-c
Confidence 87654321 12334578899999998888889999999999999999999999864321 11111100 0
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... . ..+...+..+.+++.+||..+|++|||+.|++.
T Consensus 214 ~~~-~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 214 DDH-P----------------------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred cCC-C----------------------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 000 0 001123456789999999999999999999974
No 353
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=331.48 Aligned_cols=441 Identities=27% Similarity=0.330 Sum_probs=322.5
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++.+++ -||..++. -..++.|++++|-+-...-+.+...-+|+.|||++|++. ..|..+..+.+|+.|+++.|.
T Consensus 3 vd~s~~~l~-~ip~~i~~-~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILN-NEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred cccccccCc-ccchhhcc-HHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 456666666 66666653 233555555555554211122233334555555555555 555555555555555555555
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCC-----------------
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASN----------------- 144 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~----------------- 144 (869)
|. ..|.+..++.+|++|.|.+|++. .+|. .+..+.+|+.|+++.|++. ..|..+..++.
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~-~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~ 155 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPA-SISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ 155 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCch-hHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc
Confidence 55 44555555555555555555554 4552 3455555555555555555 23444444444
Q ss_pred --CcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccc
Q 002897 145 --LELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSN 222 (869)
Q Consensus 145 --L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 222 (869)
++.+++..|.+.+....+...++. .|+|.+|.+... .+..+.+|+.|.+..|++.... +.+ .
T Consensus 156 ~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~---------dls~~~~l~~l~c~rn~ls~l~---~~g--~ 219 (1081)
T KOG0618|consen 156 TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVL---------DLSNLANLEVLHCERNQLSELE---ISG--P 219 (1081)
T ss_pred ccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhh---------hhhhccchhhhhhhhcccceEE---ecC--c
Confidence 455555555555555555555555 699999998732 3778899999999999987321 111 2
Q ss_pred cceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecc
Q 002897 223 TMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALE 302 (869)
Q Consensus 223 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 302 (869)
+++.|+.++|.+....+ -..-.+|++++++.|+++ .+|++++.+.+|+.|+..+|+++ .+|..+...++|+.|++.
T Consensus 220 ~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 220 SLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAA 295 (1081)
T ss_pred chheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhh
Confidence 49999999999983333 223458999999999998 66799999999999999999996 888899999999999999
Q ss_pred cccccccCCcCccCccccceeeccCcccCCCCCccccccccc-cceecccCCcccCCCcccccCCccccccccccccccc
Q 002897 303 INNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTL-SLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSG 381 (869)
Q Consensus 303 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~-l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 381 (869)
.|.+. .+|....++++|+.|+|..|+|. .+|+.++..... +..|+.+.|++.......=.....|+.|++.+|.|++
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 99999 78888899999999999999998 788877776665 7788999999984332222345679999999999998
Q ss_pred cCCccccCCCCCcEEEeeCccccCCCCc-cccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCc
Q 002897 382 DIPGTLSACTSLEYVKMQDNSFSGSIPP-SLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGV 460 (869)
Q Consensus 382 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 460 (869)
..-..+.++..|+.|+|++|+|. ++|+ .+.+++.|+.|+||+|+|+ .+|..+.++..|++|...+|++... |....
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f-Pe~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF-PELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec-hhhhh
Confidence 77778999999999999999998 6664 6789999999999999998 8999999999999999999999865 47788
Q ss_pred cCCCccccccCCcc
Q 002897 461 FSNKTRFSLSGNGK 474 (869)
Q Consensus 461 ~~~~~~~~~~~n~~ 474 (869)
++.++.++++.|.-
T Consensus 451 l~qL~~lDlS~N~L 464 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNL 464 (1081)
T ss_pred cCcceEEecccchh
Confidence 89999999998853
No 354
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.7e-33 Score=291.70 Aligned_cols=254 Identities=24% Similarity=0.380 Sum_probs=204.9
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|+..+.||+|++|.||+|.+..+++.|++|++..... ...+.+.+|++++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 47788999999999999999988999999999865442 45678899999999999999999999865431 26789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999998764 389999999999999999999998 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
......... .......++..|+|||...+..++.++||||||+++|+|++|..||..... ...........
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~ 219 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAALYKIGSS 219 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHhcccc
Confidence 876554310 012335688999999999888899999999999999999999999975331 11111000000
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ...+...+..+.+++.+|++.+|++||++.|++.
T Consensus 220 ~~~-----------------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 220 GEP-----------------------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCC-----------------------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000 0111123567889999999999999999999985
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.2e-33 Score=307.03 Aligned_cols=282 Identities=20% Similarity=0.255 Sum_probs=199.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 630 (869)
.+|.+.+.||+|+||.||+|++..+|+.||+|++... .......+.+|+++++.++||||+++++++.... ......
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 6899999999999999999999889999999998643 2223456789999999999999999999876432 122345
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++|+||+.. ++.++... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 95 ~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred EEEEeccccc-CHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 7899999964 77776531 288999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... ........
T Consensus 163 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~ 230 (342)
T cd07879 163 LARHADAE-----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV 230 (342)
T ss_pred CCcCCCCC-----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 98754321 123457889999998876 468899999999999999999999997532111 11111100
Q ss_pred h--cccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH--HHHHHH
Q 002897 790 V--LPEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK--LCAARE 859 (869)
Q Consensus 790 ~--~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~ 859 (869)
. ......+..+.......... ....+.......+.....+.+++.+||+.||++||+++|++.. ++..++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0 00000000000000000000 0000000000011234567899999999999999999999854 555543
No 356
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.1e-33 Score=304.40 Aligned_cols=290 Identities=20% Similarity=0.271 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeecccc---CC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDF---NG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 627 (869)
.++|++.++||+|+||.||+|++..+++.||+|++..... .....+.+|+++++.++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5789999999999999999999998999999999864322 223467889999999999999999987654321 22
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++||||+++ ++.+.+..... .+++..+..++.|+++||+|||+. +|+|+||||+||++++++.++|+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSV-----KLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 3467999999965 77777765432 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccc---cCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 708 DFGLAKFLPARPLDTVVE---TPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
|||++............. .........++..|+|||.+.+. .++.++|||||||++|||++|++||....... ..
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~ 236 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QL 236 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999998665432211100 11122345678899999987654 57899999999999999999999986532211 11
Q ss_pred HHhhhhhcccccccccCccchhhhhhccccc--CCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMS--RGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
................+.............. ..............+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111100000000000000000000000000 00000011123356889999999999999999999875
No 357
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.7e-33 Score=293.57 Aligned_cols=250 Identities=23% Similarity=0.301 Sum_probs=202.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|++.++||+|++|.||+|.+..+++.+|+|.+.... ......+.+|+++++.++|+||+++.+++.. ....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD-----GNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc-----CCEEE
Confidence 5788999999999999999999899999999986432 3345677889999999999999999988654 37899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 999999999999998773221 23489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .....++..|+|||...+..++.++|+||+|+++|++++|+.||...... ........
T Consensus 151 ~~~~~~~----------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~ 215 (256)
T cd08530 151 KVLKKNM----------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKVQR 215 (256)
T ss_pred hhhccCC----------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhc
Confidence 8765431 11235788999999999888999999999999999999999999643211 11111100
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .......+.++.+++.+|++.+|++|||+.|+++
T Consensus 216 ~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 216 GKY-----------------------PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCC-----------------------CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0111234566889999999999999999999975
No 358
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.9e-33 Score=297.96 Aligned_cols=273 Identities=21% Similarity=0.302 Sum_probs=201.4
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.+.||+|++|.||+|.+..+++.+|+|++..... .....+.+|++++++++|+||+++++++.. ....++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH-----KGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc-----CCCEEE
Confidence 6778899999999999999988999999999864432 345678899999999999999999998654 378899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+++ ++.+++..... .+++..+..++.|+++|++|||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQR-----GLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999975 89888876532 389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc-
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL- 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~- 791 (869)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+ ..........
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~ 217 (283)
T cd05118 147 SFGSPV--------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGT 217 (283)
T ss_pred ecCCCc--------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCC
Confidence 765432 111234578899999998776 78999999999999999999999986532211 1111111100
Q ss_pred --ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 --PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 --~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.......+......... ............+..+..+.+++.+||+.||.+||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSF-PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CchHhcccchhhhhhhhhhh-ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000001000000000000 000000001122345678999999999999999999999975
No 359
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.4e-33 Score=292.28 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=194.2
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||.|++|.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+ ....++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD-----KKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc-----CCccEEEEecC
Confidence 689999999999998889999999986432 2345678999999999999999999998654 37789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999998754 288999999999999999999999 9999999999999999999999999999866443
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. ......|+..|+|||.+.+..++.++|+||+|+++|+|++|..||.....+. ...........
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~---- 210 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGN---- 210 (262)
T ss_pred c---------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccC----
Confidence 1 1122357889999999988889999999999999999999999997543211 11111111000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
.....+...+..+.+++.+||+.+|++||+ ++|+++
T Consensus 211 ------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 211 ------------------GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ------------------CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 000011122456889999999999999999 677765
No 360
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.7e-33 Score=306.19 Aligned_cols=284 Identities=19% Similarity=0.256 Sum_probs=203.4
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccc
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSID 624 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 624 (869)
.++....++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 455667789999999999999999999998899999999986432 223466788999999999999999999876432
Q ss_pred -cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 625 -FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 625 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
+......+++++++ +++|.+++.... +++..+..++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 22334578888887 789998886532 89999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
+||+|||.+...... .....++..|+|||...+ ..++.++|||||||++|+|++|+.||...... ..
T Consensus 159 ~kl~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~ 226 (345)
T cd07877 159 LKILDFGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQ 226 (345)
T ss_pred EEEeccccccccccc-----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 999999998754321 223457889999998766 46788999999999999999999998642211 11
Q ss_pred HHHhhhhh--cccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 783 LHEFSKMV--LPEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 783 ~~~~~~~~--~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
........ .+......+.......+... ..................+.+++.+|++.||.+||++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 227 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 11111110 00111111111000000000 0000000000000134567899999999999999999999864
No 361
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.1e-33 Score=304.94 Aligned_cols=281 Identities=19% Similarity=0.301 Sum_probs=197.4
Q ss_pred hcCCCC-CCeeeeecceEEEEEEECCCCeEEEEEEeecccchh--------------hHHHHHHHHHHHhCCCCccceEE
Q 002897 553 TSEFSS-SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGA--------------LKSFLTECEALRSIRHRNLIKII 617 (869)
Q Consensus 553 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 617 (869)
.++|.. .+.||+|+||+||+|.+..+++.||||++....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356654 577999999999999998899999999986432211 12567899999999999999999
Q ss_pred EEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 618 TICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
+++.. .+..++||||++ |+|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+
T Consensus 87 ~~~~~-----~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nil 151 (335)
T PTZ00024 87 DVYVE-----GDFINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIF 151 (335)
T ss_pred EEEec-----CCcEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeE
Confidence 99754 378899999996 69999987643 389999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCcc------ccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVV------ETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRR 770 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~ 770 (869)
++.++.++|+|||.+............ ..........++..|+|||.+.+. .++.++||||+||++|+|++|+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 152 INSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 999999999999999876522111000 000112233468899999998764 4689999999999999999999
Q ss_pred CCCCcCccCCchHHHhhhhhc---ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 771 RPTDSMFHEGLTLHEFSKMVL---PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 771 ~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
.||......+ .......... ...+....+-....... ..............+..+.+++.+|++.+|++|||+
T Consensus 232 ~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~ 307 (335)
T PTZ00024 232 PLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFT---PRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA 307 (335)
T ss_pred CCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccC---cCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH
Confidence 9997532211 1111111100 00000000000000000 000000000111234568899999999999999999
Q ss_pred HHHHH
Q 002897 848 RDVVV 852 (869)
Q Consensus 848 ~evl~ 852 (869)
+|++.
T Consensus 308 ~~~l~ 312 (335)
T PTZ00024 308 KEALK 312 (335)
T ss_pred HHHhc
Confidence 99986
No 362
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.8e-33 Score=292.22 Aligned_cols=242 Identities=22% Similarity=0.298 Sum_probs=185.2
Q ss_pred eeeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHH---HHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 561 MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEA---LRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
.||+|+||.||+|.+..+++.||+|.+..... .....+..|..+ ++...||+|+++.+++.. .+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT-----PDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec-----CCEEEEE
Confidence 48999999999999988999999999864321 112233444443 444579999999988654 3788999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
|||+++|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999987543 389999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
..... .....|+..|+|||++.++ .++.++||||+||++|+|++|+.||........ .........
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~- 213 (278)
T cd05606 147 FSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT- 213 (278)
T ss_pred cCccC----------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhc-
Confidence 43221 1234689999999998754 589999999999999999999999975322111 111000000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
.++. .+...+..+.+++.+|+..+|++|| ++.|+++
T Consensus 214 -----~~~~------------------~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 214 -----MAVE------------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -----cCCC------------------CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 0000 0112245678999999999999999 9999985
No 363
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.9e-33 Score=304.53 Aligned_cols=282 Identities=20% Similarity=0.259 Sum_probs=198.3
Q ss_pred CCCCCCeeeeecceEEEEEEECCC--CeEEEEEEeecc--cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGEN--GMLVAVKVLNLM--QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|++.+.||+|+||.||+|++..+ +..||+|++... .....+.+.+|+++++++ +||||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 477889999999999999999877 889999998642 222346778899999999 599999999875432 12335
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++++||++ ++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6788999985 69999987544 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++........ .........|+..|+|||+..+ ..++.++||||+||++|++++|+.||...... ........
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~ 224 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQ 224 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHH
Confidence 999866543211 0112234568999999998765 46899999999999999999999998653211 01111111
Q ss_pred hhc--c-cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVL--P-EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~--~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... + +......++.....................+.....+.+++.+|++.||++|||+.|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 225 VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 0 000111111000000000000000000000112457889999999999999999999975
No 364
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=292.16 Aligned_cols=248 Identities=24% Similarity=0.335 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
-+.|+..++||+||||.||-++.+.+|+-+|.|.+.+.. +....-..+|-.|+++++.+.||.+-..| +..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf-----eTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF-----ETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----cCCC
Confidence 356888899999999999999999999999999885322 23345678999999999999998886664 4568
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+|+..|.||+|.-++-.... ..+++..++.++.+|+.||++||+. +||.||+||+|||+|+.|+++|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 99999999999999887766553 2499999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|..++... .....+||.+|||||++..+.|+...|-||+||++|||+.|+.||..... ....++
T Consensus 332 GLAvei~~g~---------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke-Kvk~eE---- 397 (591)
T KOG0986|consen 332 GLAVEIPEGK---------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE-KVKREE---- 397 (591)
T ss_pred ceEEecCCCC---------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh-hhhHHH----
Confidence 9999887653 23445899999999999999999999999999999999999999964211 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+|.....+ ....++..+++..++.+..+..||++|.-
T Consensus 398 ---------vdrr~~~~-----------~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 398 ---------VDRRTLED-----------PEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred ---------HHHHHhcc-----------hhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 11111111 11122345566778899999999999974
No 365
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=291.60 Aligned_cols=265 Identities=23% Similarity=0.330 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--c-----chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--Q-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.++|-..+.||+|||+.||+|.+-...++||||+-... . ....+...+|.+|.+.++||.||++++|+.-.
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD-- 539 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD-- 539 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec--
Confidence 45788889999999999999999989999999986421 1 12245678999999999999999999998643
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec---CCC
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD---HDM 702 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~ 702 (869)
.+..|-|+|||+|-+|.-|++..+. +++++++.|+.||+.||.||.+. +|+|||-|+||.|||+. .-|
T Consensus 540 --tdsFCTVLEYceGNDLDFYLKQhkl------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 540 --TDSFCTVLEYCEGNDLDFYLKQHKL------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred --cccceeeeeecCCCchhHHHHhhhh------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccc
Confidence 3778999999999999999998774 89999999999999999999997 78999999999999994 457
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----CCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----EASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
.+||+|||+++.++.+....... -..++...||.+|.+||.+.-+ +.+.|+||||+|||+|.++.|+.||.....
T Consensus 611 eIKITDFGLSKIMdddSy~~vdG-meLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs 689 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDG-MELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS 689 (775)
T ss_pred eeEeeecchhhhccCCccCcccc-eeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh
Confidence 89999999999998765432221 1345667899999999976533 468899999999999999999999975322
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....+.. . .++.. .++ ..+.-+....+...+|++|+++.-++|....|+..
T Consensus 690 QQdILqe-N-TIlkA--tEV-------------------qFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 690 QQDILQE-N-TILKA--TEV-------------------QFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred HHHHHhh-h-chhcc--eec-------------------cCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 2111111 0 00000 000 00011123445678999999999999998887754
No 366
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.1e-33 Score=293.48 Aligned_cols=244 Identities=20% Similarity=0.280 Sum_probs=188.3
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHH-hCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALR-SIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|.+..+|+.||+|+++... ......+..|..++. ..+|+|++++++++.. .+..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 57999999999999998899999999986432 122234455555544 4489999999998754 37899999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+...
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999997654 388999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKV 795 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 795 (869)
.. .....|+..|+|||...+..++.++||||+|+++|+|++|..||...... ...........
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 210 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNILSRRI 210 (260)
T ss_pred cc------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhccc
Confidence 32 12235788999999998888899999999999999999999999643211 11111100000
Q ss_pred ccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 796 MEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 796 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
. ........++..+.+++.+||+.+|++||++.++.+.+
T Consensus 211 ~--------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 211 N--------------------WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred C--------------------CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0 00001113456788999999999999999876655543
No 367
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=252.14 Aligned_cols=270 Identities=21% Similarity=0.293 Sum_probs=198.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+|...++||+|.||+||+|+..++++.||+|.++.. +++......+|+-+++.++|.|||+++++... +...-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-----dkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-----CceeE
Confidence 466678999999999999999999999999999754 34456788999999999999999999998543 47889
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+|+|||.. +|..|...-.+. ++.+.++.++.|+++|+.|+|++ ++.|||+||.|.+|+.+|+.|++|||+|
T Consensus 78 lvfe~cdq-dlkkyfdslng~-----~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSLNGD-----LDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhhH-HHHHHHHhcCCc-----CCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 99999955 999998876653 89999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+.++-.- ...+..+-|.+|++|.++.+.+ |+...|+||.|||+.|+.. |++.|.+..-. ..+....+..
T Consensus 149 rafgipv--------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd-dqlkrif~~l 219 (292)
T KOG0662|consen 149 RAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD-DQLKRIFRLL 219 (292)
T ss_pred hhcCCce--------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH-HHHHHHHHHh
Confidence 8765432 2344456799999999998876 7888999999999999998 55555542221 1122211111
Q ss_pred c---cc---ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 L---PE---KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~---~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
- .+ .+....|-.....+.+. ..-....+.....=.++++..+.-+|.+|.+|++.++
T Consensus 220 g~p~ed~wps~t~lpdyk~yp~ypat-----tswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 220 GTPTEDQWPSMTKLPDYKPYPIYPAT-----TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCccccCCccccCCCCcccCCcccc-----chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 0 01 11122221111111000 0000000111122357788888899999999998765
No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3e-33 Score=299.51 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=195.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..|+..+.||+|+||.||+|++..++..||+|.+... ......++.+|+++++.++|+|++++.+++... ..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----Ce
Confidence 3477788999999999999999989999999998642 223345678899999999999999999987653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+. |++.+++..... ++++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 899999996 588887765432 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
.+...... ....|+..|+|||.+. ...++.++|||||||++|+|++|+.||....... ....+.
T Consensus 161 ~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~ 227 (308)
T cd06634 161 SASIMAPA------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIA 227 (308)
T ss_pred cceeecCc------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHh
Confidence 98754322 1235788999999874 3567889999999999999999999986421110 001111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
.... + .......+..+.+++.+||+.+|++||++++++..-.
T Consensus 228 ~~~~---------~-----------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 228 QNES---------P-----------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred hcCC---------C-----------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 0000 0 0001134456789999999999999999999987544
No 369
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-33 Score=318.53 Aligned_cols=284 Identities=21% Similarity=0.179 Sum_probs=189.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCC-eEEEEEE--------------ee---cccchhhHHHHHHHHHHHhCCCCcc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENG-MLVAVKV--------------LN---LMQKGALKSFLTECEALRSIRHRNL 613 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~--------------~~---~~~~~~~~~~~~E~~~l~~l~h~ni 613 (869)
..++|++.+.||+|+||+||+|..+... ..+++|. +. .........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998764322 2222221 10 0112234567899999999999999
Q ss_pred ceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 614 IKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 614 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
+++++++... +..++|++++. +++.+++........ .......+..++.|++.||+|||++ +|+||||||
T Consensus 226 v~l~~~~~~~-----~~~~lv~e~~~-~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILRSE-----ANTYMITQKYD-FDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEEEC-----CeeEEEEeccc-cCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 9999997654 67899999985 588888765432111 1234667889999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCC-
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRP- 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~p- 772 (869)
+|||++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999987643221 122345799999999999999999999999999999999998764
Q ss_pred CCcCccC-CchHHHhhhhhcccccccccCc--cchhhhhhcccccCC-Cccc--hHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 773 TDSMFHE-GLTLHEFSKMVLPEKVMEIVDP--SLLLEVRANNSMSRG-GERV--KIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 773 f~~~~~~-~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+...... ...+.+...... ....+..++ .+............. .... .....+..+.+++.+|+++||++|||
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rps 447 (501)
T PHA03210 369 IGDGGGKPGKQLLKIIDSLS-VCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPG 447 (501)
T ss_pred ccCCCCCHHHHHHHHHHhcc-cChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcC
Confidence 4322111 111111111110 000011110 000000000000000 0000 00112345778899999999999999
Q ss_pred HHHHHHH
Q 002897 847 MRDVVVK 853 (869)
Q Consensus 847 ~~evl~~ 853 (869)
+.|+++.
T Consensus 448 a~elL~h 454 (501)
T PHA03210 448 AAELLAL 454 (501)
T ss_pred HHHHhhC
Confidence 9999863
No 370
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2e-33 Score=305.22 Aligned_cols=278 Identities=20% Similarity=0.265 Sum_probs=199.6
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 628 (869)
..++|++.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|++++++++||||+++++++.... ....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 457899999999999999999999989999999998542 2223456789999999999999999999875432 1122
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+ +++|.+++... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++|+|
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 3568999998 77999888643 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||.+...... .....++..|+|||.+.+ ..++.++||||+||++|++++|+.||....... ......
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~ 229 (343)
T cd07880 162 FGLARQTDSE-----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIM 229 (343)
T ss_pred cccccccccC-----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 9999754322 123357889999998876 458899999999999999999999997532110 111111
Q ss_pred hhhc--ccccccccCccchhhhhhccc-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVL--PEKVMEIVDPSLLLEVRANNS-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~--~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... +..+...+.......+..... ..........+.+...+.+++.+|++.||++|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 230 KVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1000 000000000000000000000 0000000011234456889999999999999999999984
No 371
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.3e-33 Score=294.24 Aligned_cols=253 Identities=25% Similarity=0.335 Sum_probs=195.1
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeecccc---hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQK---GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++||||+++++.+.. ....++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 6899999999999988899999999864432 445678999999999999999999887543 47889999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999998754 389999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
................++..|+|||......++.++||||||+++|++++|+.||...... ...........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~--- 218 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNGKI--- 218 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCc---
Confidence 2110000011223455788999999998888999999999999999999999999643211 11111100000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
. .+.....+..+.+++.+||+.+|++|||+.++.+.|+
T Consensus 219 -~------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 219 -E------------------WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -C------------------CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 0000012466789999999999999999955554443
No 372
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.4e-33 Score=296.83 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=194.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|++|.||+|.+..+++.||||+++... ......+..|+.++.+. .||||+++++++.+. ..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD-----SD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC-----Ce
Confidence 467899999999999999999998889999999996543 23345667788777666 599999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||++ +++.+++..... .+++..+..++.|++.|++|||+.. +|+||||+|+||+++.++.+||+|||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 899999985 478777765432 4899999999999999999999732 89999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC----CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE----ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
.+....... ......++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... . +.
T Consensus 161 ~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~-~~ 227 (296)
T cd06618 161 ISGRLVDSK---------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---F-EV 227 (296)
T ss_pred cchhccCCC---------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---H-HH
Confidence 987654321 112234788999999987553 788999999999999999999998642111 1 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
............. ....++.++.+++.+||+.||++||+++++++.-
T Consensus 228 ~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 228 LTKILQEEPPSLP---------------------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred HHHHhcCCCCCCC---------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 1111110000000 0002345688999999999999999999998753
No 373
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.1e-32 Score=295.65 Aligned_cols=245 Identities=22% Similarity=0.329 Sum_probs=192.7
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
|...+.||+|+||.||+|++..+|+.||+|++.... ......+.+|+++++.++|||++++++++.+. ...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE-----HTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEEE
Confidence 666788999999999999998899999999986432 23345678999999999999999999997653 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+. |++.+++..... ++++.++..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 98 lv~e~~~-~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999995 588888765443 389999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
..... .....|+..|+|||++. ...++.++|||||||++|+|++|..||...... ......
T Consensus 169 ~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~----~~~~~~ 232 (313)
T cd06633 169 SKSSP------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHI 232 (313)
T ss_pred cccCC------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHH
Confidence 64321 12345888999999874 456888999999999999999999998643111 111000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
. ....... ..+..+..+.+++.+||+.+|.+||++.+++..
T Consensus 233 ~-~~~~~~~----------------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 233 A-QNDSPTL----------------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred H-hcCCCCC----------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000000 001233457889999999999999999999863
No 374
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=277.80 Aligned_cols=201 Identities=29% Similarity=0.386 Sum_probs=178.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
-++|...++||+|.||.|.+++.+.+|+.+|+|++++. .+++...-..|-++|+..+||.+..+-.. |+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 46788899999999999999999999999999999743 45556667889999999999998877654 56669
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+||||..||.|.-++.+.+. +++...+.+...|+.||.|||++ +||.||+|.+|.|+|.+|++||+||
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~------FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERV------FSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhc------ccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 99999999999999988887653 88889999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
|+++.-- ......+..+||+.|.|||++....|+.++|-|.+|||+|||++|+.||..
T Consensus 313 GLCKE~I--------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 313 GLCKEEI--------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred ccchhcc--------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 9997422 122556778999999999999999999999999999999999999999975
No 375
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=5e-33 Score=294.63 Aligned_cols=271 Identities=21% Similarity=0.319 Sum_probs=199.2
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|++++++++|+|++++.+++.. ....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT-----ERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----CCceEE
Confidence 567789999999999999999889999999997543 3344677899999999999999999998654 378999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRPG-----PLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 599999987632 389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc-
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL- 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~- 791 (869)
...... .......++..|+|||.+.+. .++.++|||||||++||+++|+.||....... ..........
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~ 217 (282)
T cd07829 147 AFGIPL--------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGT 217 (282)
T ss_pred ccCCCc--------cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCC
Confidence 654322 112223457789999998776 78999999999999999999999986532110 0111110000
Q ss_pred --ccccccccCcc-chhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 --PEKVMEIVDPS-LLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 --~~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+..+....+-. ....+.. ..........+.....+.+++.+||+.||++||++.|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPK---FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CcHHHHHhhcccccccccccc---cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00000000000 0000000 0000000111123567899999999999999999999975
No 376
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-33 Score=281.83 Aligned_cols=273 Identities=22% Similarity=0.288 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-C-C----ccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-H-R----NLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~~~~~~~~~~~~ 626 (869)
+.+|.+...+|+|.||.|-++.+.+++..||||+++...+ ..+...-|+++++++. + | -+|.+.++ |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 6799999999999999999999999999999999975443 3456688999999993 2 2 35666665 34
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC------
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH------ 700 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~------ 700 (869)
-.++.|||+|.+ |-|+.+++..+.. .+++...++.+++|++++++|||+. +++|-|+||+||++..
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 458899999988 6699999998764 3689999999999999999999999 9999999999999931
Q ss_pred --------------CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHH
Q 002897 701 --------------DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEM 766 (869)
Q Consensus 701 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el 766 (869)
...++++|||.|....+. .+..+.|..|+|||++.+-.++.++||||+||||+|+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-----------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-----------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccC-----------cceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 235899999999864432 2456789999999999999999999999999999999
Q ss_pred HcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhh--------hhccc---ccCCCc--------cchHHHHHH
Q 002897 767 FSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEV--------RANNS---MSRGGE--------RVKIEECLV 827 (869)
Q Consensus 767 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~~~---~~~~~~--------~~~~~~~~~ 827 (869)
.||...|+... +...-.+++.+..+-...++...-...+ ..... ++...+ .........
T Consensus 303 ytG~~LFqtHe--n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~ 380 (415)
T KOG0671|consen 303 YTGETLFQTHE--NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHV 380 (415)
T ss_pred eccceecccCC--cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHh
Confidence 99999997533 2221133333322211111111100000 00000 000000 011123446
Q ss_pred HHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 828 AVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 828 ~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
++++|+++|+.+||.+|+|+.|++.
T Consensus 381 ~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 381 QLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHHHccCccccccHHHHhc
Confidence 7999999999999999999999975
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.1e-33 Score=295.94 Aligned_cols=256 Identities=24% Similarity=0.363 Sum_probs=202.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 629 (869)
++|.+.+.||+|++|.||+|....+|+.||+|++... .....+.+.+|++++++++ ||||+++++++. +.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-----DEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc-----CCc
Confidence 4788999999999999999999989999999998642 2233467889999999998 999999998754 347
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 8999999999999999998764 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCcc------------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 710 GLAKFLPARPLDTVV------------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 710 g~a~~~~~~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
|.+............ ..........++..|+|||...+..++.++||||+|++++++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 999876543321000 00122334567899999999988889999999999999999999999997532
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM----RDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 852 (869)
.. ....... .. . ...+...++.+.+++.+||+.+|++|||+ +|+++
T Consensus 227 ~~-~~~~~~~----~~------~------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 227 EY-LTFQKIL----KL------E------------------YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH-HHHHHHH----hc------C------------------CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11 0111100 00 0 00011234567899999999999999999 77654
No 378
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.8e-33 Score=293.70 Aligned_cols=271 Identities=22% Similarity=0.296 Sum_probs=195.7
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|++.+.||+|++|+||+|+...+++.||+|.+..... .......+|+..+++++ |||++++++++.. .+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 6778999999999999999988899999999864322 22234567999999998 9999999998654 478899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
||||+ +|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 8899999877541 2389999999999999999999999 99999999999999999999999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh--
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV-- 790 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-- 790 (869)
...... ......++..|+|||++.+ ..++.++||||||+++|+|++|+.||....... .........
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~ 217 (283)
T cd07830 148 EIRSRP---------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGT 217 (283)
T ss_pred eccCCC---------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCC
Confidence 654321 1223457889999998754 457899999999999999999999986532211 111000000
Q ss_pred -cccccccc--cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 -LPEKVMEI--VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 -~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......+. .+......... ..........+..+..+.+++.+||+.+|++|||++|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 218 PTKQDWPEGYKLASKLGFRFPQ---FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CChhhhhhHhhhhccccccccc---cccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000000 00000000000 0000000011122467889999999999999999999975
No 379
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.6e-32 Score=291.83 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=194.7
Q ss_pred CCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
+|++.+.||+|+||.||.|... .+|+.||+|++.... ....+.+.+|+.+++++ +|++|+++.+++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 4788899999999999999984 478999999986432 22346678899999999 69999999988543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
....++||||+++++|.+++.... ++++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 367899999999999999997654 378999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
+|||.+........ .......|+..|+|||...+. .++.++||||||+++|+|++|+.||...... ....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~ 218 (290)
T cd05613 147 TDFGLSKEFHEDEV-------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQA 218 (290)
T ss_pred eeCccceecccccc-------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHH
Confidence 99999976543221 112234588999999998753 4678999999999999999999998632111 1112
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
.+........ .+.+..+...+.+++.+||+.||++|| ++++++.
T Consensus 219 ~~~~~~~~~~------------------------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 219 EISRRILKSE------------------------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred HHHHHhhccC------------------------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 2211111000 001112345678999999999999997 6777765
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.9e-33 Score=304.21 Aligned_cols=278 Identities=20% Similarity=0.277 Sum_probs=199.5
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 628 (869)
..++|++.+.||+|++|.||+|++..+++.||+|++... .....+.+.+|+.++++++|||++++.+++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 457899999999999999999999989999999998642 23334667889999999999999999887654321 223
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++|+||+ +++|.+++... .+++..+..++.|+++|++|||+. ||+||||||+||+++.++.++|+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 4589999998 66999998753 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
||.+...... .....++..|+|||...+ ..++.++||||+||++|++++|+.||...... .......
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~ 229 (343)
T cd07851 162 FGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM 229 (343)
T ss_pred cccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 9999765332 123357889999998765 36789999999999999999999999643211 0111111
Q ss_pred hhh--cccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMV--LPEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~--~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .++.....+.......+... ....+..........+..+.+++.+|++.||++|||+.||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 230 NLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 100 00000000000000000000 000000000001123567889999999999999999999976
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=8.1e-33 Score=293.72 Aligned_cols=257 Identities=22% Similarity=0.268 Sum_probs=197.6
Q ss_pred CCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
+|++.+.||+|++|.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||+|+++.+.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~---- 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT---- 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec----
Confidence 4778899999999999999864 467899999986432 22345678999999999 69999999988543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
....++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|
T Consensus 77 -~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 77 -DTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred -CCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 367899999999999999987643 388999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
+|||+++....... .......|+..|+|||...+.. .+.++||||||+++|+|++|..||...... ....
T Consensus 147 ~dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~ 218 (288)
T cd05583 147 TDFGLSKEFLAEEE-------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQS 218 (288)
T ss_pred EECccccccccccc-------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHH
Confidence 99999876543221 1112345789999999987665 788999999999999999999998632111 1111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...+...... ...+......+.+++.+||+.||++|||+.++.+.|...
T Consensus 219 ~~~~~~~~~~------------------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 219 EISRRILKSK------------------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHHHHccC------------------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 1111111000 001112345678999999999999999998887766543
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=8.2e-33 Score=289.06 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=195.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-----cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-----QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
+|.+.+.||+|+||.||+|.+...+..+++|+++.. .......+..|+.++++++||||+++++++.+ ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE-----RD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-----CC
Confidence 588899999999999999999877777777776532 12233457789999999999999999988644 36
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++...... ...+++..++.++.|+++|++|||+. +++|+||+|+||+++. +.++|+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 789999999999999998753221 22489999999999999999999999 9999999999999975 57999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+....... .......|+..|+|||...+..++.++|+||||+++|+|++|..||.... .......
T Consensus 150 g~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~ 216 (260)
T cd08222 150 GVSRLLMGSC--------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLR 216 (260)
T ss_pred CceeecCCCc--------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHH
Confidence 9987654322 11223457889999999888888999999999999999999999986321 1111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... . ...+..++..+.+++.+||+.+|++||++.|+++
T Consensus 217 ~~~~~-----~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 217 IVEGP-----T------------------PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HHcCC-----C------------------CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 10000 0 0011244567889999999999999999999975
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=317.26 Aligned_cols=209 Identities=26% Similarity=0.357 Sum_probs=184.0
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec---ccchhhHHHHHHHHHHHhCCCCccceEEEEeec
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL---MQKGALKSFLTECEALRSIRHRNLIKIITICSS 622 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 622 (869)
..+++...++|.+.++||+|+||.|..++++.+++.||.|++.+ .......-|..|-++|..-+.+-|+.+...
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 35566677899999999999999999999999999999999965 234455678899999998899999988765
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
|++..+.|+|||||+||+|-..+.+.. ++++..++.++..|+-||.-+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 567799999999999999999998875 389999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC----C-CCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT----G-SEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
++||+|||.+-.+..+.. ..+...+|||.|++||++. + +.|++.+|-||+||++|||+.|..||..
T Consensus 213 HikLADFGsClkm~~dG~-------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDADGT-------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred cEeeccchhHHhcCCCCc-------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 999999999988875431 3445678999999999864 3 5699999999999999999999999964
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=296.48 Aligned_cols=242 Identities=22% Similarity=0.240 Sum_probs=197.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.+..|.....+|.|+|+.|-.+.+..+++..+||++... .....+|+.++... +||||+++.+.+.+ ..+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~-----~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYED-----GKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecC-----Cce
Confidence 356788888899999999999999999999999999654 23345678777666 79999999999654 488
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-cCCCcEEEccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL-DHDMVAHVGDF 709 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kl~Df 709 (869)
.|+|||.+.++-+.+.+...+. .. ..+..|+.+|+.|+.|||++ ||||||+||+|||+ +..++++|+||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~~------~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKPE------FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred eeeeehhccccHHHHHHHhcch------hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 9999999999998888877652 23 67788999999999999999 99999999999999 58999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.++...... ...+-|..|.|||+.....|++++|+||||+++|+|++|+.||.....+ .+....
T Consensus 461 G~a~~~~~~~-----------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~ 525 (612)
T KOG0603|consen 461 GFWSELERSC-----------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTR 525 (612)
T ss_pred chhhhCchhh-----------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHh
Confidence 9998765541 1223488999999999999999999999999999999999999864433 222222
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
+...... +..+....+|+.+||+.||.+||+|.|+...
T Consensus 526 i~~~~~s--------------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 526 IQMPKFS--------------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred hcCCccc--------------------------cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 2111111 2345567899999999999999999999764
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.9e-32 Score=319.98 Aligned_cols=147 Identities=28% Similarity=0.457 Sum_probs=131.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|.+.++||+|+||.||+|.+..+++.||||+++... ......+..|+.+++.++||||+++++++... ..
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~-----~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA-----NN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC-----CE
Confidence 57999999999999999999999899999999996432 33346788999999999999999999886543 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 999999999999999997654 378899999999999999999999 99999999999999999999999999
Q ss_pred cccc
Q 002897 711 LAKF 714 (869)
Q Consensus 711 ~a~~ 714 (869)
+++.
T Consensus 150 ls~~ 153 (669)
T cd05610 150 LSKV 153 (669)
T ss_pred CCcc
Confidence 9863
No 386
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=289.51 Aligned_cols=245 Identities=22% Similarity=0.308 Sum_probs=196.3
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEee
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
.++||+|.||+||-|+++.+|+.||||++++.. ......+++|+.||+.++||.||.+...|.. .+..+.|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET-----~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET-----PERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC-----CceEEEEeh
Confidence 479999999999999999999999999996432 3334789999999999999999999888544 588999999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEccccccc
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAHVGDFGLAK 713 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~ 713 (869)
-+. |+..+++-.... .++++.....++.||+.||.|||.+ +|+|+|+||+|||+... .++||||||+|+
T Consensus 644 Kl~-GDMLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSEK----GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hhc-chHHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 995 466666554332 2489988899999999999999999 99999999999999654 389999999999
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.+++.. .....+||+.|.|||++..+.|...-|+||.|||+|--++|..||... ..+.+.++..
T Consensus 716 iIgEks---------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQNA--- 779 (888)
T KOG4236|consen 716 IIGEKS---------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQNA--- 779 (888)
T ss_pred ecchhh---------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhcc---
Confidence 988763 345578999999999999999999999999999999999999999742 1221111110
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. -........++....+++|...++..=++|-|.++-+.
T Consensus 780 --a------------------FMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 780 --A------------------FMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred --c------------------cccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 0 01122233455667788999999999999998876654
No 387
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-32 Score=314.51 Aligned_cols=267 Identities=25% Similarity=0.413 Sum_probs=211.4
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEEC---C----CCeEEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEee
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIG---E----NGMLVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICS 621 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 621 (869)
...++..+.+.+|+|.||.||+|... . ....||||..+.. ...+.+.+..|+++|+.+ .|+||+.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 34445567779999999999999853 1 2567999998643 334568899999999999 6999999999987
Q ss_pred ccccCCCceEEEEeecccCCCHHHHHhhCC--Ccccc--------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 002897 622 SIDFNGVDFKAIVYDFMQNGSLEEWLHQNN--DKLEV--------CNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDL 691 (869)
Q Consensus 622 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~--------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 691 (869)
. ....++|+||++.|+|.++++..+ ...+. ..++..+.+.++.|||.|++||++. ++||||+
T Consensus 373 ~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDL 444 (609)
T KOG0200|consen 373 Q-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDL 444 (609)
T ss_pred c-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhh
Confidence 6 378899999999999999999887 11111 2389999999999999999999999 9999999
Q ss_pred CCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCcc--CcccccCCcccCCCCCCccccchhhhHHHHHHHc-
Q 002897 692 KPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIK--GTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS- 768 (869)
Q Consensus 692 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t- 768 (869)
.++|||+.++..+||+|||+|+......... ..... -...|||||.+....|+.+|||||||+++||++|
T Consensus 445 AaRNVLi~~~~~~kIaDFGlar~~~~~~~y~-------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsL 517 (609)
T KOG0200|consen 445 AARNVLITKNKVIKIADFGLARDHYNKDYYR-------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTL 517 (609)
T ss_pred hhhhEEecCCCEEEEccccceeccCCCCceE-------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhC
Confidence 9999999999999999999998665543211 11111 2456999999999999999999999999999999
Q ss_pred CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 769 RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 769 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|..||.+.... ....+.. +.+.+...++.|..+++++++.||+.+|++||++.
T Consensus 518 G~~PYp~~~~~----~~l~~~l-----------------------~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~ 570 (609)
T KOG0200|consen 518 GGTPYPGIPPT----EELLEFL-----------------------KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFS 570 (609)
T ss_pred CCCCCCCCCcH----HHHHHHH-----------------------hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence 88998652111 1111111 12233345567788999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002897 849 DVVVKLCAARE 859 (869)
Q Consensus 849 evl~~L~~~~~ 859 (869)
|+.+.+.....
T Consensus 571 ~~~~~~~~~l~ 581 (609)
T KOG0200|consen 571 ECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHHHHHH
Confidence 99999998543
No 388
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-32 Score=298.08 Aligned_cols=266 Identities=21% Similarity=0.311 Sum_probs=217.5
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++.+...++.|++...||.|.+|.||+++...+|+.+|+|+..... +..+++..|++|++.. .|||++.++|++.-.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34445556678999999999999999999999999999999986543 3346778899999988 799999999998877
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
+-..++..|+|||||.+||..+.++...+ ..+.|+.+.-|++.++.|+.+||.. .++|||||-.|||++.++.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g----~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKG----NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcc----cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 66778999999999999999999988763 3599999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----CCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----EASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
||++|||.+..+.... ......+||+.|||||++... .|+.++|+||+|++..||.-|.+|+.++..
T Consensus 162 VKLvDFGvSaQldsT~--------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP 233 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTV--------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP 233 (953)
T ss_pred EEEeeeeeeeeeeccc--------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch
Confidence 9999999997665432 445667899999999987543 477889999999999999999999876543
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....+ .++.. ..|. ...++....++.++|..|+..|-++||++.++++
T Consensus 234 mraLF------~IpRN----PPPk----------------Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 234 MRALF------LIPRN----PPPK----------------LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhhhc------cCCCC----CCcc----------------ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 21110 01100 0111 1123456678999999999999999999999875
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=8.9e-32 Score=279.52 Aligned_cols=237 Identities=29% Similarity=0.361 Sum_probs=191.2
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
||+|+||.||+|.+..+++.||+|++.... ......+..|++++++++||||+++++.+. +....++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ-----TEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----cCCeeEEEEecC
Confidence 689999999999998889999999986432 224567899999999999999999998754 347899999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPAR 718 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 718 (869)
++++|.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999998764 389999999999999999999998 9999999999999999999999999999765443
Q ss_pred CCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 719 PLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 719 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. .......++..|+|||...+...+.++|+||||+++|++++|+.||..... ............
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~--- 210 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDPL--- 210 (250)
T ss_pred C--------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCCC---
Confidence 1 122345578899999999888889999999999999999999999964321 111111111000
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
..+...+..+.+++.+||..||++||++.+
T Consensus 211 ---------------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 211 ---------------------RFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 000112456789999999999999999944
No 390
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-34 Score=269.45 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=191.2
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHh-CCCCccceEEEEeeccccCCCceEEEEee
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRS-IRHRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
...||.|+||+|++..++++|+..|||+++.... .+.+++..|.+...+ -+.||||+++|.+... +..||.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----CceeeeHH
Confidence 4579999999999999999999999999976543 456788899886544 4899999999986542 66799999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
.|.- |+..+-+.-... ....+++.-+-.|+...+.||.||-... .|+|||+||+|||++..|.+||||||++..+.
T Consensus 144 LMd~-SlDklYk~vy~v-q~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVYSV-QKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHhh-hHHHHHHHHHHH-HhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 9944 766543322111 1124888888999999999999998775 89999999999999999999999999997654
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
+.. ..+.-.|...|||||.+... .|+-+|||||+|+++||+.||+.||..-.. .+++....+..+.
T Consensus 220 ~Si---------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s---vfeql~~Vv~gdp 287 (361)
T KOG1006|consen 220 DSI---------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS---VFEQLCQVVIGDP 287 (361)
T ss_pred HHH---------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH---HHHHHHHHHcCCC
Confidence 331 22334689999999987653 488999999999999999999999864211 2333333222211
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..-..+. ..-+....+.+++..|+..|-++||...++.+
T Consensus 288 p~l~~~~-------------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 288 PILLFDK-------------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CeecCcc-------------------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 1111111 11134567889999999999999999998865
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.98 E-value=5.5e-32 Score=278.01 Aligned_cols=222 Identities=19% Similarity=0.134 Sum_probs=175.8
Q ss_pred ecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCHH
Q 002897 565 GSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLE 644 (869)
Q Consensus 565 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 644 (869)
|.+|.||+|++..+++.||+|++.... ....|...+....||||+++++++.. .+..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS-----EDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec-----CCeEEEEEecCCCCCHH
Confidence 899999999999999999999986532 23345555556679999999998654 37889999999999999
Q ss_pred HHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCcc
Q 002897 645 EWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVV 724 (869)
Q Consensus 645 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 724 (869)
+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----- 139 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----- 139 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----
Confidence 9987654 389999999999999999999999 99999999999999999999999999876543321
Q ss_pred ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccch
Q 002897 725 ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLL 804 (869)
Q Consensus 725 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 804 (869)
....++..|+|||...+..++.++||||+||++|||++|+.|+....... ......
T Consensus 140 ------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------~~~~~~--- 195 (237)
T cd05576 140 ------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------NTHTTL--- 195 (237)
T ss_pred ------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------cccccc---
Confidence 12345678999999988889999999999999999999998875321100 000000
Q ss_pred hhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 805 LEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
..+...+..+.+++.+|++.||++||++.+
T Consensus 196 ---------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 196 ---------------NIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred ---------------CCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 000123456789999999999999999743
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.3e-32 Score=275.67 Aligned_cols=137 Identities=25% Similarity=0.422 Sum_probs=119.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-----C---CccceEEEEeeccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-----H---RNLIKIITICSSID 624 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~ 624 (869)
.++|.+.++||-|.|++||+|.+..+.+.||+|+.+.. ....+....|+.+|++++ | .+||++++.|....
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999999999999999998643 334467789999999982 3 47999999988763
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
....++|+|+|++ |-+|..+|+...- ..++...+.+|++||+.||.|||..| ||||-||||+|||+
T Consensus 156 -pNG~HVCMVfEvL-GdnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 -PNGQHVCMVFEVL-GDNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred -CCCcEEEEEehhh-hhHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4458999999999 6699999987653 35999999999999999999999999 99999999999999
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.6e-31 Score=302.06 Aligned_cols=274 Identities=17% Similarity=0.169 Sum_probs=173.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCC----CeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeec-cccC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGEN----GMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSS-IDFN 626 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 626 (869)
..++|++.++||+|+||.||+|++..+ +..||+|++...... +....| .++...+.++..++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 899999987532221 111111 1222223333322222111 1013
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc--------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL--------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
.....++||||+++++|.+++....... .........+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 4567899999999999999987543110 001122345678999999999999999 99999999
Q ss_pred CCceeecC-CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----------------------C
Q 002897 693 PSNVLLDH-DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----------------------E 749 (869)
Q Consensus 693 p~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~ 749 (869)
|+|||++. ++.+||+|||+|+.+..... .......+++.|+|||.+... .
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 57999999999976543211 223345789999999965322 2
Q ss_pred CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc-----ccccccCccchhhhhhcccccCCCccchHHH
Q 002897 750 ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE-----KVMEIVDPSLLLEVRANNSMSRGGERVKIEE 824 (869)
Q Consensus 750 ~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 824 (869)
++.++||||+||++|||+++..|++.. ...+.+..... .+....++....+... .......
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~d~ 421 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRR--------GFEVLDL 421 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhcCCcHHHHHHhhccccchhhhh--------hhhhccc
Confidence 345679999999999999977765421 11111111000 0000001100000000 0000001
Q ss_pred HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 825 CLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 825 ~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
......+|+.+|++.||++|||++|+++.
T Consensus 422 ~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 422 DGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred cchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 12345689999999999999999999873
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=296.30 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=190.7
Q ss_pred CCCCCeeeeecce-EEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEE
Q 002897 556 FSSSNMVGQGSFG-TVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 556 y~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
|...+++|.|+.| .||+|.. .|+.||||++- .+..+...+|+..++.- +|||||++++.- .+..+.||
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEE
Confidence 3444678999987 5799999 79999999873 23345678999999988 699999999873 44589999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---C--CcEEEcc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---D--MVAHVGD 708 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kl~D 708 (869)
+.|.|.. +|.+++...... .........+.+..|+++||++||+. +|||||+||.||||+. + ..++|+|
T Consensus 581 alELC~~-sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 ALELCAC-SLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EehHhhh-hHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 9999966 999999885211 11122255678899999999999998 9999999999999976 3 4799999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC-CCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR-RRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg-~~pf~~~~~~~~~~~~~~ 787 (869)
||+++..+.+... -....+..||.+|+|||++....-+.++||||+||++|+.++| .+||+.....+..+..-.
T Consensus 655 fglsKkl~~~~sS-----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~ 729 (903)
T KOG1027|consen 655 FGLSKKLAGGKSS-----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN 729 (903)
T ss_pred cccccccCCCcch-----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc
Confidence 9999998776532 1335677899999999999998888899999999999999995 999986544332221110
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ...+ ...+++ +..+||.+|+.++|..||+|.+|+.
T Consensus 730 ~~-----L~~L---------------------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 730 YT-----LVHL---------------------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cc-----eeee---------------------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 0000 001122 5679999999999999999999985
No 395
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-32 Score=272.53 Aligned_cols=205 Identities=25% Similarity=0.342 Sum_probs=174.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 627 (869)
...+|....+||+|+||.|.+|..+.+.+.+|||++++. ..+..+--..|-++|+.- +.|.++++..++ +.
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF-----QT 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF-----QT 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----hh
Confidence 345899999999999999999999999999999999642 233444556677777766 577788887774 44
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
.+..|.||||+.||+|--.+++... +.+..+..+|..||-||-+||++ ||+.||+|.+|||+|.+|++||+
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~Gk------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVGK------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhcc------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEee
Confidence 5889999999999999998887664 77778899999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
|||+++.--.. ...+....||+.|+|||++...+|+..+|-||+||++|||+.|++||++..+
T Consensus 493 DFGmcKEni~~--------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 493 DFGMCKENIFD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ecccccccccC--------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 99999743221 2445678899999999999999999999999999999999999999987433
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-32 Score=245.95 Aligned_cols=209 Identities=25% Similarity=0.331 Sum_probs=168.8
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
...++......||+|+||.|-+.++..+|...|+|.++.. ..+..++..+|+.+..+. .+|.+|+++|.+.. .
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----e 117 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----E 117 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----c
Confidence 3445556678899999999999999999999999999643 344557788898876554 79999999997433 4
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...+|.||.|.. ||..+-++.-.. ...+++..+-+|+..+.+||.|||++- .++|||+||+|||++.+|++|+||
T Consensus 118 gdvwIcME~M~t-Sldkfy~~v~~~--g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCD 192 (282)
T KOG0984|consen 118 GDVWICMELMDT-SLDKFYRKVLKK--GGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICD 192 (282)
T ss_pred ccEEEeHHHhhh-hHHHHHHHHHhc--CCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcc
Confidence 778999999955 887665442221 224899999999999999999999986 899999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC----CCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----EASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
||.+..+.+.- ..+...|...|||||.+..+ .|+-|+||||+|+.+.||.+++.||+.-..
T Consensus 193 FGIsG~L~dSi---------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 193 FGISGYLVDSI---------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred cccceeehhhh---------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 99998765432 11224588899999986543 689999999999999999999999976443
No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3.7e-32 Score=251.00 Aligned_cols=281 Identities=19% Similarity=0.279 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+++|+|.|+.||.|....+.+.++||+++... .+.+.+|+.|++.+. ||||++++++..++. ....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccCc
Confidence 468999999999999999999988899999999997544 377899999999996 999999999987652 3567
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg 710 (869)
.+++||+.+.+....-.. ++..+++..+.+++.||.|+|+. ||.|||+||.|++||... .++|+|+|
T Consensus 111 aLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred hhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 899999998777666533 77788999999999999999999 999999999999998764 79999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|.++.+... ..-++.+..|.-||.+..- .|+..-|+|||||++..|+..+.||-........+...++.
T Consensus 179 LAEFYHp~~e---------YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakV 249 (338)
T KOG0668|consen 179 LAEFYHPGKE---------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKV 249 (338)
T ss_pred hHhhcCCCce---------eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHH
Confidence 9998866532 2334567888999987664 47888899999999999999999986544443344443333
Q ss_pred hccccc-------ccccCccchhhhhh---cccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHH
Q 002897 790 VLPEKV-------MEIVDPSLLLEVRA---NNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV--KLCAA 857 (869)
Q Consensus 790 ~~~~~~-------~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~ 857 (869)
.-...+ .-.+||........ ..|..- ...+...-..++..+++.+.+.+|-.+||||+|.++ .+..+
T Consensus 250 LGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~F-i~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~ 328 (338)
T KOG0668|consen 250 LGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRF-INSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV 328 (338)
T ss_pred hChHHHHHHHHHHccCCChhHhhHhhccccccHHHh-CCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence 221111 11234433221111 111000 000111112356789999999999999999999986 34444
Q ss_pred HHhh
Q 002897 858 REAF 861 (869)
Q Consensus 858 ~~~~ 861 (869)
+++.
T Consensus 329 ~~~~ 332 (338)
T KOG0668|consen 329 REAE 332 (338)
T ss_pred HHHh
Confidence 4443
No 398
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-31 Score=261.31 Aligned_cols=274 Identities=21% Similarity=0.317 Sum_probs=212.5
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCC-----eEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEE
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENG-----MLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITI 619 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 619 (869)
.+++.....+++....+-+|.||.||.|.+.+.. +.|-+|.++.. .+-....+..|.-.+....|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3445555567788889999999999999886433 34566766432 33345678888888999999999999999
Q ss_pred eeccccCCCceEEEEeecccCCCHHHHHhhCCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 620 CSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDK--LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 620 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
+.+ +....+.++.++.-|+|..++...+.. .....++..+...++.|++.|++|||++ +|||.||.++|.+
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 865 347788999999999999999833211 1223477888899999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
||+..++||+|=.+++.+-+.+.. .-.........||+||.+....|+.++|||||||++|||+| |+.|+...
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYh------cLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYH------CLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred ehhheeEEeccchhccccCccccc------ccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 999999999999999877655321 22223345678999999999999999999999999999999 99998653
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
...+ ...+. +.+.+..++-.||++++.++.-||+.+|++||+++|++.-|.+
T Consensus 503 DPfE--m~~yl--------------------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 503 DPFE--MEHYL--------------------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred CHHH--HHHHH--------------------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 2211 11111 1122333445789999999999999999999999999999887
Q ss_pred HHHh
Q 002897 857 AREA 860 (869)
Q Consensus 857 ~~~~ 860 (869)
....
T Consensus 555 F~~q 558 (563)
T KOG1024|consen 555 FHTQ 558 (563)
T ss_pred HHHH
Confidence 6554
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=6.6e-30 Score=264.18 Aligned_cols=239 Identities=27% Similarity=0.374 Sum_probs=192.5
Q ss_pred cceEEEEEEECCCCeEEEEEEeecccchh-hHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCHH
Q 002897 566 SFGTVFKGIIGENGMLVAVKVLNLMQKGA-LKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLE 644 (869)
Q Consensus 566 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 644 (869)
+||.||+|.+..+|+.+|+|++....... .+.+.+|++.+++++|+|++++++++... ...++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCHH
Confidence 58999999998889999999997654433 68899999999999999999999987653 6789999999999999
Q ss_pred HHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCcc
Q 002897 645 EWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVV 724 (869)
Q Consensus 645 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 724 (869)
+++..... +++..++.++.+++.|++|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRGR------LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhccC------CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 99976542 78999999999999999999999 99999999999999999999999999998765432
Q ss_pred ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccch
Q 002897 725 ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLL 804 (869)
Q Consensus 725 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 804 (869)
......++..|+|||...+..++.++||||+|+++|++++|..||...... ............ ..
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~~~~~~~-~~------ 206 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKKIGKPKP-PF------ 206 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhccCC-CC------
Confidence 223345788999999998888999999999999999999999998642111 111111100000 00
Q ss_pred hhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 805 LEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......++..+.+++.+|+..+|++||++.|+++
T Consensus 207 --------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 207 --------------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred --------------ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 0000014457889999999999999999999986
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=7.3e-30 Score=281.95 Aligned_cols=268 Identities=18% Similarity=0.187 Sum_probs=183.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC----------------CCCeEEEEEEeecccchhhHH--------------HHHH
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG----------------ENGMLVAVKVLNLMQKGALKS--------------FLTE 601 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 601 (869)
..++|++.++||+|+||+||+|... ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 345789999986543332222 3346
Q ss_pred HHHHHhCCCCc-----cceEEEEeecccc---CCCceEEEEeecccCCCHHHHHhhCCCcc------------------c
Q 002897 602 CEALRSIRHRN-----LIKIITICSSIDF---NGVDFKAIVYDFMQNGSLEEWLHQNNDKL------------------E 655 (869)
Q Consensus 602 ~~~l~~l~h~n-----iv~~~~~~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~ 655 (869)
+.++.+++|.+ +++++++|..... ......++||||+++|+|.++++...... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 67777776654 4677777654211 12356899999999999999997532110 1
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccC
Q 002897 656 VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKG 735 (869)
Q Consensus 656 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g 735 (869)
...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ .......+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-------~~~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-------FNPLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-------cCccccCC
Confidence 12357788999999999999999999 999999999999999999999999999975533211 11112235
Q ss_pred cccccCCcccCCCC--------------------C--CccccchhhhHHHHHHHcCCC-CCCcCccCCch-------HHH
Q 002897 736 TVGYIAPEYGTGSE--------------------A--SMTGDVYSFGILLLEMFSRRR-PTDSMFHEGLT-------LHE 785 (869)
Q Consensus 736 t~~y~aPE~~~~~~--------------------~--~~~sDvwslG~il~el~tg~~-pf~~~~~~~~~-------~~~ 785 (869)
++.|+|||.+.... + ..+.||||+||++|+|++|.. ||.....-... ...
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~ 452 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR 452 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence 78999999875432 1 134799999999999999875 66432111111 111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESP---TDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 852 (869)
|.... . ...+ ............+++.+|+..+| .+|+|++|+++
T Consensus 453 ~r~~~-~----~~~~------------------~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 453 WRMYK-G----QKYD------------------FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHhhc-c----cCCC------------------cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 11000 0 0000 00112334567789999999766 78999999986
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.4e-31 Score=254.36 Aligned_cols=204 Identities=24% Similarity=0.370 Sum_probs=178.0
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
...++|...++||+|+|+.|..++.+++.+.+|+|++++. +.+..+-.+.|-.+..+- +||.+|.+..+ |+
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fq 321 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQ 321 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hc
Confidence 3457899999999999999999999999999999999743 344556677787777766 79999998887 44
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
.....++|.||++||+|--.+++.+. ++++.++.+...|.-||.|||++ ||+.||+|.+|||+|..|++|+
T Consensus 322 tesrlffvieyv~ggdlmfhmqrqrk------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikl 392 (593)
T KOG0695|consen 322 TESRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKL 392 (593)
T ss_pred ccceEEEEEEEecCcceeeehhhhhc------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceee
Confidence 55889999999999999877776653 99999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+|+|+++.--. ....++...||+.|+|||.+.+..|+..+|-|++||+++||+.|+.||+-.
T Consensus 393 tdygmcke~l~--------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 393 TDYGMCKEGLG--------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred cccchhhcCCC--------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 99999974322 224567789999999999999999999999999999999999999999753
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-32 Score=257.16 Aligned_cols=204 Identities=23% Similarity=0.360 Sum_probs=168.7
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
+.+..+.||.|+||+||.+++..+|+.||+|.+... .-...+++.+|+.++..++|.|++..+++......+--.+.|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 445668999999999999999999999999988532 223457889999999999999999998876543333335567
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
.++|.|.. +|...+-... +++...+.-+.+||++||+|||+. +|.||||||.|.+++.+...||||||+|
T Consensus 134 V~TELmQS-DLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHh-hhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 88888854 8887776543 488999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
+.-..+.. ......+-|..|+|||.+.|. .|+.+.||||.|||+.|++..+..|..
T Consensus 204 Rvee~d~~-------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 204 RTWDQRDR-------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred cccchhhh-------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 87654321 222334568899999999886 589999999999999999999988865
No 403
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=273.88 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=197.8
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec---ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL---MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++.++..||-|+||.|-++........+|+|++++ .+....+....|-.||...+.|.||++|..|. +..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-----d~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-----DSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-----cchh
Confidence 456677899999999999999865555689888853 33445567889999999999999999998754 4588
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+.||-|-||.++..++.+.. ++......++..+++|++|||++ +||.||+||+|.+++.+|.+||.|||
T Consensus 495 vYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 9999999999999999988764 88889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+|+.+... ..+..++||+.|.|||++.....+.++|.||+|+++||+++|.+||.+...- ..+....+.+
T Consensus 566 FAKki~~g---------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-ktYn~ILkGi 635 (732)
T KOG0614|consen 566 FAKKIGSG---------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-KTYNLILKGI 635 (732)
T ss_pred hHHHhccC---------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHhhh
Confidence 99988654 4566788999999999999999999999999999999999999999864321 1111111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+. ...+..+.+...+++.+..+.+|.+|.-
T Consensus 636 ---d~-----------------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 636 ---DK-----------------------IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hh-----------------------hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 00 0011234455678899999999999975
No 404
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-32 Score=270.15 Aligned_cols=305 Identities=19% Similarity=0.237 Sum_probs=196.5
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC-c
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR-N 80 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~-n 80 (869)
.|.++.+++ +||.++. .....++|..|+|+.+.|.+|+.+++|++||||+|.|+.+-|++|.+|++|.+|-+-+ |
T Consensus 51 VdCr~~GL~-eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred EEccCCCcc-cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 467889999 9999998 5788999999999988889999999999999999999999999999999988887766 9
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+|+.+..+.|.+|.+|+-|.+.-|++. .++.++|+.|++|..|.+.+|.+..+.-..|..+.+++.+.+..|.+..
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic--- 202 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC--- 202 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc---
Confidence 999777778888999999999888887 7888888999999999999988886666688888888888888887321
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccce-EEEecCCcccccCC
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMT-TIDIGGNYFSGTIP 239 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~-~L~l~~n~l~~~~~ 239 (869)
..+++.+.. ++.-|. ..+++..-..-..+.++++..+.+..|......+. .+....+... +-|
T Consensus 203 --dCnL~wla~-~~a~~~------------ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~-~cP 266 (498)
T KOG4237|consen 203 --DCNLPWLAD-DLAMNP------------IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDS-ICP 266 (498)
T ss_pred --ccccchhhh-HHhhch------------hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCC-cCh
Confidence 111111111 011111 11223333333334444443333333322211010 1111111111 222
Q ss_pred -ccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcc
Q 002897 240 -PGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCT 318 (869)
Q Consensus 240 -~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 318 (869)
..|..+++|+.|+|++|+++.+-+.+|.++..+++|+|..|+|..+-...|.++..|+.|+|.+|+|+...|.+|..+.
T Consensus 267 ~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~ 346 (498)
T KOG4237|consen 267 AKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLF 346 (498)
T ss_pred HHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccc
Confidence 2355555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccceeeccCccc
Q 002897 319 SLIMLTLSKNKL 330 (869)
Q Consensus 319 ~L~~L~l~~N~l 330 (869)
+|.+|+|-.|.+
T Consensus 347 ~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 347 SLSTLNLLSNPF 358 (498)
T ss_pred eeeeeehccCcc
Confidence 555555555544
No 405
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=268.97 Aligned_cols=206 Identities=25% Similarity=0.398 Sum_probs=176.7
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCC---CCcc
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIR---HRNL 613 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~ni 613 (869)
.++...+...+|+..+.+|.|+||.|+.|.++++...|+||.+.+.. .......-.|+.||..++ |+||
T Consensus 552 ~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI 631 (772)
T KOG1152|consen 552 GCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI 631 (772)
T ss_pred cceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch
Confidence 33444455568999999999999999999999999999999985432 112234567999999996 9999
Q ss_pred ceEEEEeeccccCCCceEEEEeecc-cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 614 IKIITICSSIDFNGVDFKAIVYDFM-QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 614 v~~~~~~~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
+++++++ ++++++|++||-. ++.+|++++..... +++.+...|++|++.|+++||+. ||||||||
T Consensus 632 lKlLdfF-----Eddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdik 697 (772)
T KOG1152|consen 632 LKLLDFF-----EDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIK 697 (772)
T ss_pred hhhhhee-----ecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhcccccccc---Cceecccc
Confidence 9999995 5568999999975 45689999988764 89999999999999999999999 99999999
Q ss_pred CCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCC
Q 002897 693 PSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRR 771 (869)
Q Consensus 693 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~ 771 (869)
-+||.++.+|-+||+|||.|.....++. ..++||..|.|||++.|.+| +..-||||+|+++|.++....
T Consensus 698 denvivd~~g~~klidfgsaa~~ksgpf----------d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 698 DENVIVDSNGFVKLIDFGSAAYTKSGPF----------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred cccEEEecCCeEEEeeccchhhhcCCCc----------ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 9999999999999999999987766543 34679999999999999987 566899999999999999999
Q ss_pred CCC
Q 002897 772 PTD 774 (869)
Q Consensus 772 pf~ 774 (869)
||.
T Consensus 768 pyy 770 (772)
T KOG1152|consen 768 PYY 770 (772)
T ss_pred CCc
Confidence 975
No 406
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.9e-29 Score=264.31 Aligned_cols=212 Identities=24% Similarity=0.305 Sum_probs=175.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+-|..++.||-|+||.|.+|+..++...||.|.+++.+ +........|-+||..-+.+-||+++.. |++.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 35778899999999999999998899999999987544 3344567889999999999999999887 456699
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+||+|++||++-..+-+..- +.+..++.++.++..|+++.|.. |+|||||||+|||||.+|++||+|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 9999999999999999887653 78888899999999999999999 99999999999999999999999999
Q ss_pred ccccCCC---------CCC--CCcccc-----------------------CCCCCCccCcccccCCcccCCCCCCccccc
Q 002897 711 LAKFLPA---------RPL--DTVVET-----------------------PSSSSGIKGTVGYIAPEYGTGSEASMTGDV 756 (869)
Q Consensus 711 ~a~~~~~---------~~~--~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv 756 (869)
++.-+.- +.. .+.++. .......+||+.|+|||++....|+.-+|-
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 9865421 000 000000 001123569999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCcCccC
Q 002897 757 YSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 757 wslG~il~el~tg~~pf~~~~~~ 779 (869)
||.|||||||+.|++||-.....
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCC
Confidence 99999999999999999765444
No 407
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=5e-30 Score=263.32 Aligned_cols=205 Identities=22% Similarity=0.306 Sum_probs=174.1
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC------CCccceEEEEeeccc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR------HRNLIKIITICSSID 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~ 624 (869)
....+|.+....|+|-|++|..|.+...|..||||++.... ...+.=..|++||+++. --|+++++..|.
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--- 504 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK--- 504 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh---
Confidence 44578999999999999999999999899999999996533 34466689999999994 347888877644
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-c
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-V 703 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~ 703 (869)
..++.|+|||-+ ..+|.+++++.+.. ..+....+..++.|+.-||..|-.. +|+|.||||+||||++.- .
T Consensus 505 --hknHLClVFE~L-slNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 505 --HKNHLCLVFEPL-SLNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNI 575 (752)
T ss_pred --hcceeEEEehhh-hchHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcce
Confidence 458999999988 55999999987753 4588999999999999999999998 999999999999998764 7
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
+||||||.|....+...+. +.-+..|+|||++.|-+|+...|+||.||+|||+.||+..|.+...
T Consensus 576 LKLCDfGSA~~~~eneitP----------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEITP----------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred eeeccCccccccccccccH----------HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 8999999998877654322 2346789999999999999999999999999999999999976433
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=243.97 Aligned_cols=271 Identities=19% Similarity=0.239 Sum_probs=201.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec--ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL--MQKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 629 (869)
..+|.-.+.+|.|.- .|..|.+.-.++.||+|.+.. ......++..+|...+..+.|+||++++.++.... .....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 357778889999998 788888888999999998742 23445688899999999999999999999886532 22345
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+|||+|. ++|.+.+... ++-+.+..|..|++.|++|||+. ||+|||+||+||++..+..+||.||
T Consensus 95 e~y~v~e~m~-~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILME--------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 6799999994 5999998843 67788999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+..... -..+..+.|..|+|||++.+..+.+.+||||+||++.||++|+.-|.+ ...+.+|.+.
T Consensus 163 g~ar~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g----~d~idQ~~ki 229 (369)
T KOG0665|consen 163 GLARTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG----KDHIDQWNKI 229 (369)
T ss_pred hhhcccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC----chHHHHHHHH
Confidence 999865443 123456789999999999998899999999999999999999998863 3334444333
Q ss_pred hcccccccccCccchhhhhhc-----------------ccccCC---CccchHHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRAN-----------------NSMSRG---GERVKIEECLVAVIRIGVVCSMESPTDRMQMRD 849 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 849 (869)
.- .....|++...+.... ...+.. ...+...-......+++.+|+-.+|++|.|+++
T Consensus 230 ~~---~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~d 306 (369)
T KOG0665|consen 230 IE---QLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDD 306 (369)
T ss_pred HH---HhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHH
Confidence 21 0111111111110000 000000 000001112345678999999999999999999
Q ss_pred HHH
Q 002897 850 VVV 852 (869)
Q Consensus 850 vl~ 852 (869)
+++
T Consensus 307 aL~ 309 (369)
T KOG0665|consen 307 ALR 309 (369)
T ss_pred Hhc
Confidence 986
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.9e-29 Score=235.32 Aligned_cols=255 Identities=19% Similarity=0.270 Sum_probs=194.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.+.|.+.+.+|+|.||.+-+|+++.+.+.+|+|.++... ...++|.+|...--.+ .|.||+.-+++. |+..+.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 356899999999999999999999999999999986543 2457888888765556 589999887763 5566889
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--CCCcEEEccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD--HDMVAHVGDF 709 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Df 709 (869)
.+++||++.|+|.+-+...+ +.+....+++.|+++|+.|||++ ++||||||.+||||- +..++|+|||
T Consensus 98 vF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 99999999999999887754 78888999999999999999999 999999999999993 2348999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
|.++..+.. .....-+..|.|||..... ...+.+|||.||+++|.++||+.||+.....+..+.
T Consensus 168 G~t~k~g~t-----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 168 GLTRKVGTT-----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred ccccccCce-----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 999755432 1222346779999975432 357789999999999999999999986655555555
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
+|....-.... .+ +.......+.+.++.++-+..+|++|=-..++.++-
T Consensus 237 ~~~~w~~rk~~------~~---------------P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 237 EWEQWLKRKNP------AL---------------PKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred HHHHHhcccCc------cC---------------chhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 55443321111 11 111123345677888899999999995555554443
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=8e-30 Score=269.85 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=205.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|....++|.|.||.||+|+++.+++..|+|+++....+..+-.+.|+-+++..+||||+.+++-+... +..+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~-----dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR-----DKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh-----cCcE
Confidence 35799999999999999999999999999999999988888888899999999999999999999986543 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
|+||||.+|+|.+.-+-.. ++++.++..+++...+|++|||+. |-+|||||-.||++++.|.+|++|||.+
T Consensus 89 icMEycgggslQdiy~~Tg------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred EEEEecCCCcccceeeecc------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 9999999999999877655 489999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCccc---CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG---TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
..+... ..+.....||+.|||||+. ..+.|..++|||++|+...|+---++|-.......... -..+.
T Consensus 160 aqitat--------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~-LmTkS 230 (829)
T KOG0576|consen 160 AQITAT--------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF-LMTKS 230 (829)
T ss_pred hhhhhh--------hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH-Hhhcc
Confidence 655432 2455668899999999974 45679999999999999999998888843221111100 00010
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+. ....-|+. ...+.+-++++.|+..+|++|||++.++.
T Consensus 231 ~~q--pp~lkDk~---------------------kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 GFQ--PPTLKDKT---------------------KWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCC--CCcccCCc---------------------cchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 000 00011111 23455778999999999999999988765
No 411
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.96 E-value=6.8e-31 Score=261.82 Aligned_cols=398 Identities=19% Similarity=0.237 Sum_probs=238.2
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccC-CccCccCCccccCCCCCCEEeCcCc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRG-NRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
++|+.|+|+ +||.+.|..+++|++|||++|+|+.+-|++|.++..|..|-+-+ |+|+.+..++|++|..|+.|.+.-|
T Consensus 72 irLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan 150 (498)
T KOG4237|consen 72 IRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNAN 150 (498)
T ss_pred EEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChh
Confidence 689999999 99999999999999999999999999999999999998876666 9999877889999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccc------------eeccccccCCCCCcEE
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLT------------GFLPISLSNASNLELL 148 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~------------~~~~~~l~~l~~L~~L 148 (869)
++.-+..++|..+++|..|.+-.|.+. .++.+.|..+..++.+.+..|.+. ...|..++...-..-.
T Consensus 151 ~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 151 HINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 999888999999999999999999998 999999999999999999998732 2233344444444444
Q ss_pred EccCCccccccCcCccCC-CCCCEEEccCc-cCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceE
Q 002897 149 ELRDNQFIGKMSINFNSL-KNLSVLILGNN-HLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTT 226 (869)
Q Consensus 149 ~L~~N~i~~~~~~~~~~l-~~L~~L~l~~n-~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~ 226 (869)
.+.++++..+.+..|.-- ..+.+=..+.+ .....| ...|..+++|+.|+|++|+|+.+-+.+|.++.. +++
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP------~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~-l~e 302 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICP------AKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAE-LQE 302 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcCh------HHHHhhcccceEeccCCCccchhhhhhhcchhh-hhh
Confidence 444444444444333221 11111111111 111111 124555555555555555555555555555543 555
Q ss_pred EEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccce--ecccc
Q 002897 227 IDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLL--ALEIN 304 (869)
Q Consensus 227 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L--~l~~n 304 (869)
|.|..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+.. ++ .|..| .|..+
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C-------nC-~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC-------NC-RLAWLGEWLRKK 374 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC-------cc-chHHHHHHHhhC
Confidence 5555555554444455555555555555555555555555555555555555443320 00 00000 00000
Q ss_pred cccccCCcCccCccccceeeccCcccCCC---CCcccc---------ccccccceecccCCcccCCCcccccCCcccccc
Q 002897 305 NLQGKIPSSLGNCTSLIMLTLSKNKLDGV---LPPQIL---------SVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQL 372 (869)
Q Consensus 305 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~---~~~~~~---------~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L 372 (869)
.-. ..|. -+.-..++.+.++.+.+... .|+... .....-+-..-|+..++ .+|..+. ..-..|
T Consensus 375 ~~~-~~~~-Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~tel 449 (498)
T KOG4237|consen 375 SVV-GNPR-CQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTEL 449 (498)
T ss_pred CCC-CCCC-CCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHH
Confidence 000 0000 01112344455544433211 111000 00001111223333343 4444332 235567
Q ss_pred ccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCC
Q 002897 373 DISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSN 425 (869)
Q Consensus 373 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 425 (869)
++.+|.++ .+|.. .+..| .+++++|++...---.|.++.+|.+|-||.|
T Consensus 450 yl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 450 YLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 77777777 55655 55666 7777777776444456777777777777765
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=3.8e-28 Score=245.99 Aligned_cols=283 Identities=25% Similarity=0.326 Sum_probs=202.7
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
...+.|..+++||.|.|++||+|.+.. ..+.||+|.+.... ...++.+|+++|..+ .+.||+++.+++ .
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~-----r 105 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCF-----R 105 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhh-----c
Confidence 345678999999999999999999986 78899999886543 336789999999999 599999999984 4
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAH 705 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~k 705 (869)
..+..++|+||++..+..++... ++..++..+++.+..||+++|.. |||||||||+|++.+.. +.-.
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~ 173 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGV 173 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCce
Confidence 56899999999999998888765 67889999999999999999999 99999999999999754 6789
Q ss_pred EccccccccCCCCC------C----------C----------------Cc----cccCCCCCCccCcccccCCcccCCCC
Q 002897 706 VGDFGLAKFLPARP------L----------D----------------TV----VETPSSSSGIKGTVGYIAPEYGTGSE 749 (869)
Q Consensus 706 l~Dfg~a~~~~~~~------~----------~----------------~~----~~~~~~~~~~~gt~~y~aPE~~~~~~ 749 (869)
|+|||+|....... . . .. .........+.||++|+|||++...+
T Consensus 174 LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~ 253 (418)
T KOG1167|consen 174 LVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP 253 (418)
T ss_pred EEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc
Confidence 99999997321100 0 0 00 00011123466999999999987654
Q ss_pred -CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh----------cccc--cccc----cCccchhhhhhc--
Q 002897 750 -ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV----------LPEK--VMEI----VDPSLLLEVRAN-- 810 (869)
Q Consensus 750 -~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~----------~~~~--~~~~----~d~~~~~~~~~~-- 810 (869)
-++++||||.|||+.-+++++.||-....+-..+.+.+... ..+. +.+. ..+.....+..-
T Consensus 254 ~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~ 333 (418)
T KOG1167|consen 254 RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHI 333 (418)
T ss_pred CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccCh
Confidence 68899999999999999999999976555433333322111 1111 1110 001111111100
Q ss_pred --ccc-cC-CCccchH-HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 811 --NSM-SR-GGERVKI-EECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 811 --~~~-~~-~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .. ...+... +..+..+++++.+|+..||.+|.||+|.++
T Consensus 334 ~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 334 ESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 00 0111111 223457899999999999999999999986
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=7.8e-27 Score=235.52 Aligned_cols=211 Identities=30% Similarity=0.522 Sum_probs=182.2
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccC
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQN 640 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 640 (869)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.+.|++++++++++... ...++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCCC
Confidence 68999999999999877999999999755432 357789999999999999999999997643 678999999999
Q ss_pred CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEccccccccCCCCC
Q 002897 641 GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDFGLAKFLPARP 719 (869)
Q Consensus 641 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~~~~~~~ 719 (869)
++|.+++..... .+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENEG-----KLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 999999987531 388999999999999999999999 9999999999999999 8999999999998665432
Q ss_pred CCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccc
Q 002897 720 LDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEI 798 (869)
Q Consensus 720 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (869)
. ......+...|++||..... .++.++|+|++|++++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------- 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------- 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------
Confidence 1 12234578899999998877 788999999999999999
Q ss_pred cCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 799 VDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 799 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ----------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 135689999999999999999999864
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=4.9e-26 Score=232.17 Aligned_cols=200 Identities=31% Similarity=0.506 Sum_probs=173.0
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
|.+.+.||.|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++... ...+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEEE
Confidence 56778999999999999999877999999999765544 567889999999999999999999986543 678999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
+||+++++|.+++...... +++..+..++.+++.++.+||+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 9999999999999875431 78899999999999999999999 999999999999999999999999999987
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCccc-CCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYG-TGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
...... .......++..|++||.. ....++.++|||+||+++++|++|+.||..
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLA-------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCccc-------ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 654320 122334578889999998 666788899999999999999999999964
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=6.4e-25 Score=214.31 Aligned_cols=170 Identities=21% Similarity=0.265 Sum_probs=129.8
Q ss_pred CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCC
Q 002897 641 GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPL 720 (869)
Q Consensus 641 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 720 (869)
|+|.++++.... ++++.+++.++.|+++||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~- 63 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ- 63 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-
Confidence 689999986443 399999999999999999999999 6 999999999999999 99987654321
Q ss_pred CCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccC
Q 002897 721 DTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVD 800 (869)
Q Consensus 721 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d 800 (869)
..|++.|+|||++.+..++.++|||||||++|||+||+.||............+.....+..
T Consensus 64 ------------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------ 125 (176)
T smart00750 64 ------------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD------ 125 (176)
T ss_pred ------------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC------
Confidence 25789999999999999999999999999999999999998653322222222211111000
Q ss_pred ccchhhhhhcccccCCCccchHHHHHH--HHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 801 PSLLLEVRANNSMSRGGERVKIEECLV--AVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
+ ..+........ .+.+++.+||+.+|++||++.|+++.+..+...
T Consensus 126 ~---------------~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 126 P---------------RDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred c---------------cccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0 00011122333 688999999999999999999999998877544
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.5e-24 Score=266.13 Aligned_cols=337 Identities=20% Similarity=0.253 Sum_probs=203.2
Q ss_pred CcccccCcCCCEEEccCCc------cCccCCccccCCC-CCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCC
Q 002897 39 PVSIGNLSALQVIDIRGNR------LGGKIPDTLGQLR-KLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLP 111 (869)
Q Consensus 39 ~~~~~~l~~L~~L~L~~n~------i~~~~p~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 111 (869)
+.+|.++.+|+.|.+..++ +...+|+.|..++ +|+.|++.+|.+. .+|..| ...+|++|+|++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 3445555555555554432 2223444444443 4556666555555 344444 3455566666666554 444
Q ss_pred chhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCc-cCCCCCCCCcchh
Q 002897 112 FDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNN-HLGNRAANDLDFV 190 (869)
Q Consensus 112 ~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~ 190 (869)
.+ +..+++|+.|+|++|.....+| .++.+++|++|+|++|......|..+..+++|+.|++++| .++.++..
T Consensus 628 ~~-~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~----- 700 (1153)
T PLN03210 628 DG-VHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG----- 700 (1153)
T ss_pred cc-cccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc-----
Confidence 32 3455566666665544333333 3555666666666666544455556666666666666654 34444432
Q ss_pred hhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcce-------ecCC
Q 002897 191 TVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLI-------GTVP 263 (869)
Q Consensus 191 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------~~~~ 263 (869)
.++++|+.|++++|.....+|.. ..+|+.|+|++|.++ .+|..+ .+++|++|.+.++... ...+
T Consensus 701 ---i~l~sL~~L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 701 ---INLKSLYRLNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred ---CCCCCCCEEeCCCCCCccccccc----cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccch
Confidence 15667777777776544444432 223777777777776 455544 5677777777664321 1122
Q ss_pred ccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccccccc
Q 002897 264 PEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTT 343 (869)
Q Consensus 264 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 343 (869)
..+...++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~------- 843 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPD------- 843 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccc-------
Confidence 223345789999999998777889999999999999999886544777766 788999999998754322222
Q ss_pred ccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeC-ccccCCCCccccccccccEEEc
Q 002897 344 LSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQD-NSFSGSIPPSLNFLKSIKVLDL 422 (869)
Q Consensus 344 ~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~L 422 (869)
. .++|+.|+|++|.++ .+|.++..+++|+.|++++ |+++ .+|..+..+++|+.|++
T Consensus 844 ------------------~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l 900 (1153)
T PLN03210 844 ------------------I---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDF 900 (1153)
T ss_pred ------------------c---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeec
Confidence 1 235666666666666 5666666667777777766 3344 46666666677777777
Q ss_pred cCC
Q 002897 423 SSN 425 (869)
Q Consensus 423 ~~N 425 (869)
++|
T Consensus 901 ~~C 903 (1153)
T PLN03210 901 SDC 903 (1153)
T ss_pred CCC
Confidence 666
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=3.3e-24 Score=265.12 Aligned_cols=340 Identities=19% Similarity=0.273 Sum_probs=220.8
Q ss_pred cCCccccCCCCCCEEeCcCcc------cCccCCcccccCC-CCcEEECcCCcCcccCCchhhcCCcchhhhhccccccce
Q 002897 61 KIPDTLGQLRKLIYLNIGRNQ------FSGFIPPSIYNIS-SFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTG 133 (869)
Q Consensus 61 ~~p~~~~~l~~L~~L~L~~n~------i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~ 133 (869)
..+.+|.++++|+.|.+..+. +...+|..|..++ +|+.|++.+|.+. .+|.. | ...+|+.|++.+|++..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~-f-~~~~L~~L~L~~s~l~~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSN-F-RPENLVKLQMQGSKLEK 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCc-C-CccCCcEEECcCccccc
Confidence 345667778888888776553 2234566666654 5788888887776 77754 2 46777888888887773
Q ss_pred eccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc-CCCCCCCCcchhhhccCCCCCcEEEccCCCCCCC
Q 002897 134 FLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH-LGNRAANDLDFVTVLANCSKLENLGLYDNQFGGL 212 (869)
Q Consensus 134 ~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 212 (869)
++..+..+++|+.|+|++|......| .+..+++|++|+|++|. +..++ ..+..+++|+.|++++|...+.
T Consensus 626 -L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp-------~si~~L~~L~~L~L~~c~~L~~ 696 (1153)
T PLN03210 626 -LWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELP-------SSIQYLNKLEDLDMSRCENLEI 696 (1153)
T ss_pred -cccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccc-------hhhhccCCCCEEeCCCCCCcCc
Confidence 56667777888888887765333333 46777788888887764 33333 3467777888888877654445
Q ss_pred CChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcccc-------Cc
Q 002897 213 LPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLH-------GY 285 (869)
Q Consensus 213 ~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-------~~ 285 (869)
+|..+ ++.+ |+.|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|++|++.++... ..
T Consensus 697 Lp~~i-~l~s-L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l 769 (1153)
T PLN03210 697 LPTGI-NLKS-LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPL 769 (1153)
T ss_pred cCCcC-CCCC-CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhcccccccc
Confidence 56544 4443 778888877654444432 356777788888776 455544 4677777777664322 11
Q ss_pred CCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccC
Q 002897 286 IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGN 365 (869)
Q Consensus 286 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~ 365 (869)
.+..+...++|+.|++++|.....+|.+++++++|+.|++++|...+ .+|..+ +
T Consensus 770 ~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~-------------------------~LP~~~-~ 823 (1153)
T PLN03210 770 TPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLE-------------------------TLPTGI-N 823 (1153)
T ss_pred chhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcC-------------------------eeCCCC-C
Confidence 12222334577788888777666777778888888888877764321 233333 4
Q ss_pred CccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccC-CcccCCCccccccccccCee
Q 002897 366 LKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSS-NKLSGQIPKYLENLSFLEYL 444 (869)
Q Consensus 366 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~l 444 (869)
+++|+.|+|++|..-..+|.. .++|+.|+|++|.++ .+|.++..+++|+.|+|++ |++. .+|..+..+++|+.+
T Consensus 824 L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L 898 (1153)
T PLN03210 824 LESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETV 898 (1153)
T ss_pred ccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCee
Confidence 567777777776543344442 356777888888877 6777777788888888877 4554 566677777778888
Q ss_pred cccccc
Q 002897 445 NLSYNH 450 (869)
Q Consensus 445 ~l~~N~ 450 (869)
++++|.
T Consensus 899 ~l~~C~ 904 (1153)
T PLN03210 899 DFSDCG 904 (1153)
T ss_pred ecCCCc
Confidence 877764
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=5.1e-25 Score=264.67 Aligned_cols=207 Identities=16% Similarity=0.235 Sum_probs=139.1
Q ss_pred hCCC-CccceEEEEeeccccC--CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 002897 607 SIRH-RNLIKIITICSSIDFN--GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCK 683 (869)
Q Consensus 607 ~l~h-~niv~~~~~~~~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 683 (869)
.++| +||+++++++.....+ .....+.++||+ +++|.+++..... .+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDR-----SVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccc-----cccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3455 5788888876332211 124567788887 6699999975432 389999999999999999999999
Q ss_pred CCeEecCCCCCceeecCCCc-------------------EEEccccccccCCCCCCC------Ccc--ccCCCCCCccCc
Q 002897 684 PPVVHGDLKPSNVLLDHDMV-------------------AHVGDFGLAKFLPARPLD------TVV--ETPSSSSGIKGT 736 (869)
Q Consensus 684 ~~ivH~Dlkp~NIll~~~~~-------------------~kl~Dfg~a~~~~~~~~~------~~~--~~~~~~~~~~gt 736 (869)
||+||||||+|||++..+. +|++|||+++........ ... ..........||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 9999999999999965444 555555555432110000 000 000011224588
Q ss_pred ccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCC
Q 002897 737 VGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRG 816 (869)
Q Consensus 737 ~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 816 (869)
+.|||||++.+..++.++|||||||++|||++|.+|+.... .......... .++..
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~--------~~~~~------------- 234 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRV--------LPPQI------------- 234 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhh--------cChhh-------------
Confidence 99999999999999999999999999999999988864211 1111111110 00000
Q ss_pred CccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 817 GERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 817 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.........++.+||+.+|.+||+|.|+++
T Consensus 235 ------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 235 ------LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred ------hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 011223457888999999999999999986
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=1.3e-24 Score=247.99 Aligned_cols=265 Identities=25% Similarity=0.290 Sum_probs=179.3
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.+-..|+|++|.|+ .+|+.+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+. +|.. .++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 44556666666666 4555554 35666666666666 34432 4566667777766663 3432 346666677
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|.+. .+|. ..++|+.|++++|+++.+ |. ..++|+.|+|++|+|+++.. . ..+|+.|++++|+++.
T Consensus 270 s~N~L~-~Lp~----lp~~L~~L~Ls~N~Lt~L-P~---~p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~ 336 (788)
T PRK15387 270 FSNPLT-HLPA----LPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTS 336 (788)
T ss_pred cCCchh-hhhh----chhhcCEEECcCCccccc-cc---cccccceeECCCCccccCCC-C---cccccccccccCcccc
Confidence 777665 4552 124566666777776643 32 23578888888888776432 2 2457777888888876
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++.- ..+|++|+|++|+|++ +|.. +..|+.|++++|.|+ .+|.. ..+|+.|++++|++.+
T Consensus 337 LP~l----------p~~Lq~LdLS~N~Ls~-LP~l----p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~- 396 (788)
T PRK15387 337 LPTL----------PSGLQELSVSDNQLAS-LPTL----PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS- 396 (788)
T ss_pred cccc----------ccccceEecCCCccCC-CCCC----Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-
Confidence 6521 1468888888888874 4432 234778888888888 35543 2468889999998884
Q ss_pred CCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccc
Q 002897 262 VPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQI 338 (869)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 338 (869)
+|.. .++|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..+
T Consensus 397 LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 397 LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 5543 3679999999999985 5543 346888999999998 789999999999999999999997766544
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=4.9e-24 Score=225.72 Aligned_cols=175 Identities=21% Similarity=0.177 Sum_probs=134.1
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECC-CCeEEEEEEeecc-----cchhhHHHHHHHHHHHhCCCCccceEEEEeecc
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGE-NGMLVAVKVLNLM-----QKGALKSFLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
....++|++.+.||+|+||+||+|.+.. +++.||||++... .....+.+.+|++++++++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 4456789999999999999999999875 6788899987532 222356789999999999999998533221
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceeecCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDL-KPSNVLLDHDM 702 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~ 702 (869)
...++||||+++++|... .. .. ...++.|+++||+|||+. ||+|||| ||+|||++.++
T Consensus 91 -----~~~~LVmE~~~G~~L~~~-~~---------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~ 149 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHLA-RP---------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDG 149 (365)
T ss_pred -----CCcEEEEEccCCCCHHHh-Cc---------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCC
Confidence 346999999999999632 11 11 146788999999999999 9999999 99999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS 748 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 748 (869)
.+||+|||+|+.+...................+++.|+|||.+...
T Consensus 150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999999987654322211111222456788899999987654
No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=5.2e-23 Score=201.22 Aligned_cols=276 Identities=19% Similarity=0.229 Sum_probs=213.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
-.|.+.++||+|+||+++.|+.--+++.||||.-... ....++..|.+.++.+ ..++|..++-|- +..-+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeec-----cccchhh
Confidence 4799999999999999999999999999999975432 2346788999999988 578888887763 2335667
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-----cEEEc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-----VAHVG 707 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kl~ 707 (869)
+|+|.+ |.+|.+.+.-.... ++.+++..+|.|+..-++|+|++ ..|.|||||+|+||...+ .+.++
T Consensus 101 LVidLL-GPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 999988 77999988876553 99999999999999999999999 999999999999997654 58999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+|+.+.+......... .......||.+||+-....+.+-+.+.|+-|+|-|+++.+.|..||.+.... ...+-.
T Consensus 172 DFGmAK~YrDp~TkqHIPY-rE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~--tnK~kY 248 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPY-REHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD--TNKEKY 248 (449)
T ss_pred eccchhhhcCccccccCcc-ccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc--chHHHH
Confidence 9999999887766555443 4455677999999999999999999999999999999999999999874332 111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcccCC
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQDG 867 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~ 867 (869)
+.+- +.-.. .......+..|.++..-+.-.-+.+-.+-|..+-+...+..+.+......|+
T Consensus 249 eKIG-----e~Kr~--------------T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg 309 (449)
T KOG1165|consen 249 EKIG-----ETKRS--------------TPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDG 309 (449)
T ss_pred HHhc-----ccccc--------------CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccc
Confidence 1110 00000 0111122345666777776666778888899888888888887777666554
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.4e-23 Score=239.63 Aligned_cols=265 Identities=25% Similarity=0.327 Sum_probs=157.7
Q ss_pred cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhh
Q 002897 46 SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFV 125 (869)
Q Consensus 46 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 125 (869)
..-..|+|++|.++ .+|..+. ++|+.|+|++|+|+. +|. ..++|++|+|++|+|+ .+|. ..++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~----lp~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV----LPPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC----cccccceee
Confidence 34556777777776 5666554 367777777777763 443 2466777777777776 5653 235667777
Q ss_pred ccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEcc
Q 002897 126 AAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLY 205 (869)
Q Consensus 126 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 205 (869)
+++|.++.+ |.. .++|+.|++++|+++.+.. .+++|+.|+|++|+++.++.. ..+|+.|+++
T Consensus 269 Ls~N~L~~L-p~l---p~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~Lp~l----------p~~L~~L~Ls 330 (788)
T PRK15387 269 IFSNPLTHL-PAL---PSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPAL----------PSELCKLWAY 330 (788)
T ss_pred ccCCchhhh-hhc---hhhcCEEECcCCccccccc----cccccceeECCCCccccCCCC----------cccccccccc
Confidence 777776632 322 2456677777777665432 235677777777777665421 1346666777
Q ss_pred CCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCc
Q 002897 206 DNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGY 285 (869)
Q Consensus 206 ~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 285 (869)
+|++++ +|. ++..|+.|+|++|+|+ .+|... .+|+.|++++|++.. +|.. ..+|+.|+|++|+|++
T Consensus 331 ~N~L~~-LP~----lp~~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~- 396 (788)
T PRK15387 331 NNQLTS-LPT----LPSGLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS- 396 (788)
T ss_pred cCcccc-ccc----cccccceEecCCCccC-CCCCCC---cccceehhhcccccc-Cccc---ccccceEEecCCcccC-
Confidence 777763 332 2234677777777776 344322 356666777777663 4432 2456777777777763
Q ss_pred CCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccc
Q 002897 286 IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEI 363 (869)
Q Consensus 286 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~ 363 (869)
+|.. .++|+.|++++|+|+ .+|.. ..+|+.|++++|+|+ .+|..+..+. .+..|+|++|.|++..|..+
T Consensus 397 LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~-~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 397 LPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLS-SETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhcc-CCCeEECCCCCCCchHHHHH
Confidence 3332 245667777777776 34543 235666777777776 5666555433 34567777777776555544
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4.3e-22 Score=213.02 Aligned_cols=271 Identities=20% Similarity=0.205 Sum_probs=198.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCC-eEEEEEEeecccchhhHHHHHHHHHHHhCCC----CccceEEEEeeccccCCCc
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENG-MLVAVKVLNLMQKGALKSFLTECEALRSIRH----RNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 629 (869)
+|.+.++||+|+||.||.|.+..++ ..+|+|............+..|..++..+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 8999999999999999999997554 6789998765433333378889999888863 58888888742 2346
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-----CcE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-----MVA 704 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~ 704 (869)
+.++||+.+ |.+|.++...... ..++..++..|+.|++.+|+++|+. |++||||||+|+.+... ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 789999988 7799998866652 2499999999999999999999999 99999999999999765 369
Q ss_pred EEccccccc--cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 705 HVGDFGLAK--FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 705 kl~Dfg~a~--~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
+|.|||+|+ .+...................||..|+++....+...+.+.|+||++.++.|+..|..||........
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~- 245 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL- 245 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-
Confidence 999999998 33222211111111113456799999999999999999999999999999999999999865332111
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
............... .....+..+.++...+-..+..++|....+...++.+....
T Consensus 246 ~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 246 KSKFEKDPRKLLTDR-----------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHHHhhhhcccc-----------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 111111110000000 00112344556666666689999999999999988876654
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=7.5e-23 Score=191.22 Aligned_cols=209 Identities=24% Similarity=0.345 Sum_probs=172.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCC-CccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRH-RNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 630 (869)
..+.|.++++||.|+||.+|.|....+|..||||+-.... ....+..|..+.+.+++ ..|..+..|..+ ..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e-----~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTE-----KDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccc-----ccc
Confidence 3468999999999999999999999999999999864332 23567889999999964 556666655433 367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 707 (869)
-.+||+.. |.+|.+.+.-... .++.++++-++-|++.-++|+|.+ +++||||||+|+|..-+ ..+.++
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEE
Confidence 78999988 7899998876544 389999999999999999999999 99999999999999543 478999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
|||+|+.+.+......... .......||.+|.+-....+..-+.+.|+-|+|.++.++-.|..||++..
T Consensus 157 DFGLaKky~d~~t~~HIpy-re~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPY-REDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred eccchhhhccccccccCcc-ccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 9999998877655444332 34456779999999888888778889999999999999999999998753
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=5.6e-24 Score=201.83 Aligned_cols=248 Identities=21% Similarity=0.296 Sum_probs=187.7
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
....+|.+...|..|+|++ .|..+++|++... .....+.|..|.-.++.+.||||..+++.|..+ ....++
T Consensus 193 nl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~i 265 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVII 265 (448)
T ss_pred hhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEe
Confidence 3456889999999999999 5677778877532 233346789999999999999999999998765 678899
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc--ccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG--DFGLA 712 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~a 712 (869)
..||+.|+|+..+++.... -.+..++.+++.+||+|++|||+. +|-|----+....|+||++.+++|+ |--++
T Consensus 266 sq~mp~gslynvlhe~t~v----vvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfs 340 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTSV----VVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFS 340 (448)
T ss_pred eeeccchHHHHHHhcCccE----EEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceee
Confidence 9999999999999987643 367778999999999999999997 3334444689999999999987763 43333
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC---CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA---SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.. ..+..-.+.||+||.++..+- -.++|+|||++++||+.|...||.....-+....-..+.
T Consensus 341 fq---------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg 405 (448)
T KOG0195|consen 341 FQ---------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG 405 (448)
T ss_pred ee---------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc
Confidence 21 112234789999999887653 357899999999999999999998644332222111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
+. ...++.....+.+++.-|+..||.+||.+..|+-.|+++.
T Consensus 406 -----lr----------------------v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 -----LR----------------------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -----cc----------------------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11 1112244566789999999999999999999999888764
No 426
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=1.1e-22 Score=234.40 Aligned_cols=246 Identities=24% Similarity=0.343 Sum_probs=111.0
Q ss_pred CcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECc
Q 002897 23 KLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 102 (869)
+...|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 3444444444444 3333332 24444444444444 2333222 24444444444444 2233222 234444444
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNR 182 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 182 (869)
+|.+. .+|.... .+|+.|++++|+|+. +|..+. ++|+.|+|++|+++.+.. .+. ++|+.|++++|.++.+
T Consensus 250 ~N~L~-~LP~~l~---s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~LP~-~lp--~sL~~L~Ls~N~Lt~L 319 (754)
T PRK15370 250 INRIT-ELPERLP---SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTLPA-HLP--SGITHLNVQSNSLTAL 319 (754)
T ss_pred CCccC-cCChhHh---CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccCcc-cch--hhHHHHHhcCCccccC
Confidence 44444 4443221 234444444444442 233222 245555555555543321 111 2455555555555544
Q ss_pred CCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecC
Q 002897 183 AANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTV 262 (869)
Q Consensus 183 ~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 262 (869)
+.. + .++|+.|++++|.+++ +|..+. .+|+.|++++|+|+ .+|..+. +.|+.|++++|++. .+
T Consensus 320 P~~-------l--~~sL~~L~Ls~N~Lt~-LP~~l~---~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 320 PET-------L--PPGLKTLEAGENALTS-LPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NL 382 (754)
T ss_pred Ccc-------c--cccceeccccCCcccc-CChhhc---CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CC
Confidence 321 1 1345555555555553 343332 23555666665555 3444332 35566666666655 33
Q ss_pred CccccCCCCCCEEEccCccccCcCCCCC----CCCccccceeccccccc
Q 002897 263 PPEIGWLKNLQSLYLNSNFLHGYIPSSL----GNLTMLTLLALEINNLQ 307 (869)
Q Consensus 263 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l~~L~~L~l~~n~l~ 307 (869)
|..+. .+|+.|++++|++. .+|..+ ..++.+..|++.+|.++
T Consensus 383 P~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 43332 24566666666665 333322 23355666666666655
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.2e-22 Score=229.84 Aligned_cols=258 Identities=21% Similarity=0.232 Sum_probs=190.8
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEEEEeec----c-cc-hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL----M-QK-GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~-~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
...+++|.|++|.|+.+........++.|.+.. . .. .....+..|+.+-..+.|||++..+..+.+. ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----cc
Confidence 356789999999998888876666666665531 1 11 1112256677778888999998776664432 22
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
..-+||||++ +|...+.... .++..++..++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred chhhhhcccH-HHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 3333999999 9999998863 278889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCcc-ccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMT-GDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+......... ......+.+|+..|+|||.+.+..|.+. .||||.|+++..|.+|+.||......+... ...
T Consensus 466 ~~~vf~~~~e~----~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~ 538 (601)
T KOG0590|consen 466 AASVFRYPWEK----NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTN 538 (601)
T ss_pred cceeeccCcch----hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhh
Confidence 99776544321 1144567889999999999999999765 699999999999999999997654443322 000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....+.... .+........+.+...++.+|++.||.+|.|+++|++.
T Consensus 539 ~~~~~~~~~-----------------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 539 NYSDQRNIF-----------------EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccccc-----------------cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000000 01112223456677899999999999999999999863
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.2e-21 Score=223.59 Aligned_cols=224 Identities=23% Similarity=0.363 Sum_probs=135.0
Q ss_pred cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhh
Q 002897 46 SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFV 125 (869)
Q Consensus 46 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 125 (869)
.+...|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|++|+|++|+++ .+|.... ++|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEE
Confidence 46789999999999 6787664 58999999999999 5666554 58999999999998 7875322 3567777
Q ss_pred ccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEcc
Q 002897 126 AAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLY 205 (869)
Q Consensus 126 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 205 (869)
|++|++.. +|..+. ++|+.|++++|+|+.+ |..+. ++|+.|++++|+++.++.. + .++|++|+++
T Consensus 248 Ls~N~L~~-LP~~l~--s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~LP~~-------l--p~sL~~L~Ls 312 (754)
T PRK15370 248 LSINRITE-LPERLP--SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRTLPAH-------L--PSGITHLNVQ 312 (754)
T ss_pred CcCCccCc-CChhHh--CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCccccCccc-------c--hhhHHHHHhc
Confidence 77777763 344442 3566666666666543 33222 3566666666665554421 1 1244555555
Q ss_pred CCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCc
Q 002897 206 DNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGY 285 (869)
Q Consensus 206 ~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 285 (869)
+|+++. +|..+. ++|+.|++++|.+.+ +|..+. ++|+.|+|++|+|+ .
T Consensus 313 ~N~Lt~--------------------------LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~ 360 (754)
T PRK15370 313 SNSLTA--------------------------LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-V 360 (754)
T ss_pred CCcccc--------------------------CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-c
Confidence 555542 222221 345555555555542 333332 45666666666665 3
Q ss_pred CCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccC
Q 002897 286 IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLD 331 (869)
Q Consensus 286 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (869)
+|..+. ++|+.|++++|+|+ .+|..+. .+|+.|++++|+|+
T Consensus 361 LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 361 LPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc
Confidence 444332 45666666666666 3444433 25666666666665
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=3.4e-21 Score=192.76 Aligned_cols=206 Identities=21% Similarity=0.218 Sum_probs=147.0
Q ss_pred CCCccceEEEEeeccc----------------------cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHH
Q 002897 609 RHRNLIKIITICSSID----------------------FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLN 666 (869)
Q Consensus 609 ~h~niv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 666 (869)
+|||||++.++|.+.- .......|+||..++. +|.+|+-... .+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-------CchHHHHH
Confidence 5999999988764420 1224567899999866 9999997654 67778888
Q ss_pred HHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--CCC--cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCC
Q 002897 667 IAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD--HDM--VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAP 742 (869)
Q Consensus 667 i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 742 (869)
++.|+++|+.|||.+ ||.|||+|.+|||+. +|+ ...++|||++-.-+... -............|...-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hG--lqlpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHG--LQLPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccc--cccccccccccCCCcceecch
Confidence 999999999999999 999999999999994 333 67899999885433211 111222334445688889999
Q ss_pred cccCCCC------CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCC
Q 002897 743 EYGTGSE------ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRG 816 (869)
Q Consensus 743 E~~~~~~------~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 816 (869)
|+....+ ...|+|.|+.|.+.||+++..-||..-.+.......+.+..
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q-------------------------- 474 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ-------------------------- 474 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh--------------------------
Confidence 9876432 24689999999999999999999975221111111111111
Q ss_pred CccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 817 GERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 817 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
.+..++.++..+.+++...++.||++|+++.-....|
T Consensus 475 -LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 475 -LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred -CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 1122335667788999999999999999976655544
No 430
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=4.4e-21 Score=188.06 Aligned_cols=175 Identities=14% Similarity=0.130 Sum_probs=134.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhh---HH------HHHHHHHHHhCCCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGAL---KS------FLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~------~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
.++|...+++|.|+||.||++.. ++..+|+|+++....... .. +.+|+..+.++.||+|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999766 577899999964432222 22 67999999999999999998885543
Q ss_pred cc---CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 002897 624 DF---NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH 700 (869)
Q Consensus 624 ~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 700 (869)
.. ......++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 21 11346899999999999988732 332 2456999999999999 9999999999999999
Q ss_pred CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHH
Q 002897 701 DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMF 767 (869)
Q Consensus 701 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~ 767 (869)
+| ++++|||.......... ...+.....++.++|+||||+++....
T Consensus 171 ~g-i~liDfg~~~~~~e~~a--------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKA--------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhh--------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 98 99999998865432210 011333445677999999999887654
No 431
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.84 E-value=1.3e-19 Score=197.78 Aligned_cols=264 Identities=30% Similarity=0.418 Sum_probs=195.9
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch---hhHHHHHHHHHHHhCCCC-ccceEEEEeeccccCCCceE
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG---ALKSFLTECEALRSIRHR-NLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 631 (869)
|.+.+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++... ...
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE-----GSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC-----CEE
Confidence 677889999999999999996 88999998644332 367889999999999988 799999987432 447
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg 710 (869)
+++++|+.++++.+++...... ..++......++.|++.+++|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777765421 2388999999999999999999999 999999999999999998 79999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC---CCCCccccchhhhHHHHHHHcCCCCCCcCccC--CchHHH
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG---SEASMTGDVYSFGILLLEMFSRRRPTDSMFHE--GLTLHE 785 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~el~tg~~pf~~~~~~--~~~~~~ 785 (869)
.++............ .......|+..|+|||...+ ..++...|+||+|++++++++|..||...... ......
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~ 225 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHH
Confidence 998554432111000 12456779999999999987 57888999999999999999999997653321 011111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.................. .......+.+++..|+..+|..|.++.+....
T Consensus 226 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 226 IILELPTPSLASPLSPSN------------------PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHhcCCcccccccCccc------------------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111110000000000000 01223467789999999999999999887764
No 432
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=6e-21 Score=192.89 Aligned_cols=239 Identities=21% Similarity=0.270 Sum_probs=150.3
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCC----------CccceEEEEeec
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRH----------RNLIKIITICSS 622 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~~ 622 (869)
+...+.||.|+++.||.|++.++|+.+|||++.... ....+.+.+|.-....+.+ -.++-.++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 345678999999999999999999999999985332 3345666666655444322 122222222110
Q ss_pred c---c----cCCCc-----eEEEEeecccCCCHHHHHhh---CCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002897 623 I---D----FNGVD-----FKAIVYDFMQNGSLEEWLHQ---NNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVV 687 (869)
Q Consensus 623 ~---~----~~~~~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 687 (869)
. . -.+.. ..+++|+-+ .+||.+++.. .... ...+....+..+..|+++.+++||+. |+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlV 167 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHSY---GLV 167 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhhc---ceE
Confidence 0 0 00011 236788877 4588887653 2211 11244556677889999999999999 999
Q ss_pred ecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--------CCCCccccchhh
Q 002897 688 HGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--------SEASMTGDVYSF 759 (869)
Q Consensus 688 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwsl 759 (869)
|+||+|+|++++.+|.++|+||+.....+.... ....+..|.+||.... -.++.+.|.|++
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~-----------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L 236 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYR-----------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL 236 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEEE-----------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCceee-----------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence 999999999999999999999998876543210 0234578999996533 247889999999
Q ss_pred hHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCC
Q 002897 760 GILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSME 839 (869)
Q Consensus 760 G~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 839 (869)
|+++|.|++|..||+....+..... .+. ...+.++.+..||..++++
T Consensus 237 G~~ly~lWC~~lPf~~~~~~~~~~~---------------------~f~------------~C~~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 237 GITLYSLWCGRLPFGLSSPEADPEW---------------------DFS------------RCRDMPEPVQFLIRGLLQR 283 (288)
T ss_dssp HHHHHHHHHSS-STCCCGGGSTSGG---------------------GGT------------TSS---HHHHHHHHHHT-S
T ss_pred HHHHHHHHHccCCCCCCCccccccc---------------------cch------------hcCCcCHHHHHHHHHHccC
Confidence 9999999999999985433211111 000 0014677889999999999
Q ss_pred CCCCC
Q 002897 840 SPTDR 844 (869)
Q Consensus 840 dP~~R 844 (869)
+|.+|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.6e-20 Score=183.20 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=108.3
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccch--h-------h-----------------HHHHHHHHHHHhCCCCc
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG--A-------L-----------------KSFLTECEALRSIRHRN 612 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~E~~~l~~l~h~n 612 (869)
...||+|++|.||+|.+. +|+.||||+++..... . . .....|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999653211 0 1 12245999999998877
Q ss_pred cceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCC
Q 002897 613 LIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYL-HHHCKPPVVHGDL 691 (869)
Q Consensus 613 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dl 691 (869)
+.....+.. ...++||||++++++........ ++++.++..++.|++.+|+|+ |+. ||+||||
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 644333211 22389999999887765533222 388999999999999999999 688 9999999
Q ss_pred CCCceeecCCCcEEEccccccccC
Q 002897 692 KPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 692 kp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+||+++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 578999999999754
No 434
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=1.7e-21 Score=218.13 Aligned_cols=254 Identities=23% Similarity=0.256 Sum_probs=177.4
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHH---HHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSF---LTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+|...+.||++.|=.|.+|++. .|. |+||++-+.++ -..+.+ ..|++ ...++|||++++.-+. .....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence 6777899999999999999995 555 99999854432 223333 44444 4556899999987652 23366
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+|-+|+.+ +|+|.+..+.- +...+...|+.|++.|+.-+|.. ||+|||||.+||||+.-.-+.|+||.
T Consensus 96 AylvRqyvkh-nLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFA 165 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFA 165 (1431)
T ss_pred HHHHHHHHhh-hhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccc
Confidence 7888888866 99999877653 77888999999999999999999 99999999999999999999999997
Q ss_pred ccccC--CCCCCCCccccCCCCCCccCcccccCCcccCCC----------C-CCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 711 LAKFL--PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS----------E-ASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 711 ~a~~~--~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
.=+.. +++...+ ..........-..|.|||.+... . .+++.||||+||+++|+++ |++||.-.
T Consensus 166 sFKPtYLPeDNPad---f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS 242 (1431)
T KOG1240|consen 166 SFKPTYLPEDNPAD---FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS 242 (1431)
T ss_pred ccCCccCCCCCccc---ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH
Confidence 65432 2221111 11112223344679999965331 2 5788999999999999998 78888521
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.+-.+... ...|++...+. .+ ...+..++..|++.||++|.+|++.++.-++
T Consensus 243 -----QL~aYr~~-------~~~~~e~~Le~--------------Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 243 -----QLLAYRSG-------NADDPEQLLEK--------------IE--DVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -----HHHhHhcc-------CccCHHHHHHh--------------Cc--CccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 11111111 01111110000 00 1246789999999999999999999987554
Q ss_pred H
Q 002897 857 A 857 (869)
Q Consensus 857 ~ 857 (869)
.
T Consensus 295 ~ 295 (1431)
T KOG1240|consen 295 L 295 (1431)
T ss_pred c
Confidence 3
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.81 E-value=1.9e-19 Score=176.88 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=111.1
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccch--------------------------hhHHHHHHHHHHHhCCCCc
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG--------------------------ALKSFLTECEALRSIRHRN 612 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~n 612 (869)
...||+|++|.||+|.+. +|+.||||+++..... ....+..|++.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 8999999998753211 0123467899999999998
Q ss_pred cceEEEEeeccccCCCceEEEEeecccCCCHHHH-HhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecC
Q 002897 613 LIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEW-LHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGD 690 (869)
Q Consensus 613 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~D 690 (869)
+.....+.. ...++||||++++++... +... +++..+...++.|++.++.++|+ . ||+|||
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 754444322 124899999998865433 3322 37788999999999999999999 8 999999
Q ss_pred CCCCceeecCCCcEEEccccccccCCC
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~~~ 717 (869)
|||+||+++ ++.++|+|||+|.....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 88999999999986543
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.2e-19 Score=173.58 Aligned_cols=192 Identities=16% Similarity=0.072 Sum_probs=140.0
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc----hhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceE
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK----GALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.+...|++|+||+||.+.. .+.+++.+.+..... -....+.+|+++|+++. |+++++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4568999999999998776 788888777753322 11235789999999995 5889999886 346
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceeecCCCcEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDL-KPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kl~Dfg 710 (869)
+++|||++|.+|.+.... ....++.|++++++++|+. ||+|||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999999998654321 1135778999999999999 9999999 7999999999999999999
Q ss_pred ccccCCCCCCC------CccccCCCCCCccCcccccCCcccCCC-CCC-ccccchhhhHHHHHHHcCCCCCCcC
Q 002897 711 LAKFLPARPLD------TVVETPSSSSGIKGTVGYIAPEYGTGS-EAS-MTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 711 ~a~~~~~~~~~------~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+|......... ..... -.......++.|++|+...-- ..+ .+.+-++-|+-+|.++||..|+.+.
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~-llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRH-LLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CceecCCcchHHHHHHHHHHHH-HHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 99855433210 00000 000112256777777753221 222 4568899999999999999987543
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.2e-21 Score=173.54 Aligned_cols=166 Identities=30% Similarity=0.530 Sum_probs=117.7
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSL 320 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 320 (869)
.+.++.+.+.|.|++|+++ .+|..++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3455666777777777777 56666777777777777777776 66777777777777777777776 677777777777
Q ss_pred ceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeC
Q 002897 321 IMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQD 400 (869)
Q Consensus 321 ~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 400 (869)
+.|||.+|++.. ..+|..|-.++.|+.|+|++|.+. .+|..++++++|+.|.+.+
T Consensus 105 evldltynnl~e------------------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrd 159 (264)
T KOG0617|consen 105 EVLDLTYNNLNE------------------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRD 159 (264)
T ss_pred hhhhcccccccc------------------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeecc
Confidence 777777777652 145666666777777777777777 6666777777777777777
Q ss_pred ccccCCCCccccccccccEEEccCCcccCCCccccc
Q 002897 401 NSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLE 436 (869)
Q Consensus 401 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 436 (869)
|.+- .+|..++.+.+|+.|++.+|+++ .+|..++
T Consensus 160 ndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 160 NDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred Cchh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 7766 66677777777777777777766 5555544
No 438
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=3.9e-21 Score=170.31 Aligned_cols=181 Identities=27% Similarity=0.449 Sum_probs=160.0
Q ss_pred ccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccccccccc
Q 002897 266 IGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLS 345 (869)
Q Consensus 266 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l 345 (869)
+..+.+++.|.|++|+++ ..|..+..+.+|+.|++++|+|. .+|.+++++++|+.|+++-|++.
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-------------- 92 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-------------- 92 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh--------------
Confidence 345678889999999998 77778999999999999999998 78999999999999999998887
Q ss_pred ceecccCCcccCCCcccccCCccccccccccccccc-cCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccC
Q 002897 346 LFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSG-DIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSS 424 (869)
Q Consensus 346 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 424 (869)
.+|..|+.++.|+.|||++|.++. .+|+.|..++.|+.|+|++|.+. .+|..++.+++|+.|.+.+
T Consensus 93 ------------~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrd 159 (264)
T KOG0617|consen 93 ------------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRD 159 (264)
T ss_pred ------------cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeecc
Confidence 678889999999999999999864 68999999999999999999998 8999999999999999999
Q ss_pred CcccCCCccccccccccCeeccccccCcccCCCCCcc---CCCccccccCCcccC
Q 002897 425 NKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVF---SNKTRFSLSGNGKLC 476 (869)
Q Consensus 425 N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~---~~~~~~~~~~n~~~c 476 (869)
|.+- .+|..+..++.|++|.+.+|+++-.+|+.+.+ .+...+.+..|||.-
T Consensus 160 ndll-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 160 NDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred Cchh-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 9998 89999999999999999999999888886544 334556678888853
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=5e-19 Score=190.40 Aligned_cols=219 Identities=27% Similarity=0.411 Sum_probs=164.3
Q ss_pred HHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 002897 605 LRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKP 684 (869)
Q Consensus 605 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 684 (869)
|+.+.|.|+.+++|.+.+. ...++|.+||..|+|.+.+..... .+++.....+.++|+.||+|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~-----~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDI-----KLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhcccc-----CccHHHHHHHHHHHHHHHHHHhcC---
Confidence 3567899999999998764 778999999999999999988544 389999999999999999999998
Q ss_pred Ce-EecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-------CCccccc
Q 002897 685 PV-VHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-------ASMTGDV 756 (869)
Q Consensus 685 ~i-vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDv 756 (869)
+| .|+.+++.|.+++..+.+|++|||+......... ........-..-|.|||.+.+.. .+.++||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE------PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhccccccccc------ccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 55 9999999999999999999999999987653110 01111222456799999887641 4667999
Q ss_pred hhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhc
Q 002897 757 YSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVC 836 (869)
Q Consensus 757 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 836 (869)
||||++++|+++.+.||+........ .+.+..+.. .....+-|.+. ...+.++.+..++..|
T Consensus 142 Ys~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-~~~~~~rP~i~----------------~~~e~~~~l~~l~~~c 203 (484)
T KOG1023|consen 142 YSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-GGSNPFRPSIE----------------LLNELPPELLLLVARC 203 (484)
T ss_pred ehHHHHHHHHHhccCccccccccCCh-HHHHHHHHh-cCCCCcCcchh----------------hhhhcchHHHHHHHHh
Confidence 99999999999999999864433222 222211111 11111111111 1114455788999999
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 837 SMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 837 l~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
|..+|++||++++|-..++.+...
T Consensus 204 w~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 204 WEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccChhhCccHHHHHhhhhhhccc
Confidence 999999999999999988877664
No 440
>PRK10345 hypothetical protein; Provisional
Probab=99.78 E-value=2.1e-18 Score=169.37 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=108.9
Q ss_pred CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-----CCCccceEEEEeeccccCCCce
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-----RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+.-.+.||+|+||.||. +..++.. +||++........+.+.+|+.+++.+ +||||++++|++.+. .+...
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeE
Confidence 34567999999999995 6556665 69988765444567899999999999 579999999998764 12233
Q ss_pred -EEEEeec--ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCceeecCC----C
Q 002897 631 -KAIVYDF--MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAI-EYLHHHCKPPVVHGDLKPSNVLLDHD----M 702 (869)
Q Consensus 631 -~~lv~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~~----~ 702 (869)
..+|+|| +.+|+|.+++++.. +++. ..++.|++.++ +|||++ +|+||||||+||+++.. +
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCC
Confidence 4478999 55799999997642 4444 35677888777 999999 99999999999999743 3
Q ss_pred cEEEcccccc
Q 002897 703 VAHVGDFGLA 712 (869)
Q Consensus 703 ~~kl~Dfg~a 712 (869)
.++|+||+.+
T Consensus 147 ~~~LiDg~G~ 156 (210)
T PRK10345 147 IPVVCDNIGE 156 (210)
T ss_pred cEEEEECCCC
Confidence 8999995443
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=1.5e-20 Score=202.68 Aligned_cols=207 Identities=24% Similarity=0.256 Sum_probs=136.6
Q ss_pred cccCCCccc-ccCChhhhhccCCcCEEeccCCcCcc----ccCcccccCcCCCEEEccCCccCc------cCCccccCCC
Q 002897 2 FDAQNNKLV-GDIPVEIGCYLFKLENLSLAENHLTG----QLPVSIGNLSALQVIDIRGNRLGG------KIPDTLGQLR 70 (869)
Q Consensus 2 l~l~~~~~~-~~ip~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~------~~p~~~~~l~ 70 (869)
|||++++++ +..+ .++..+.+|++|+++++.++. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 3 l~L~~~~l~~~~~~-~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 3 LSLKGELLKTERAT-ELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred cccccCcccccchH-HHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 788888887 3444 344578889999999999853 356667788889999999988772 3345677888
Q ss_pred CCCEEeCcCcccCccCCcccccCCC---CcEEECcCCcCccc-CC--chhhcCC-cchhhhhccccccce----eccccc
Q 002897 71 KLIYLNIGRNQFSGFIPPSIYNISS---FEFIFLQSNRFHGS-LP--FDMVANL-PNLRKFVAAKNNLTG----FLPISL 139 (869)
Q Consensus 71 ~L~~L~L~~n~i~~~~p~~~~~l~~---L~~L~Ls~N~l~~~-~~--~~~~~~l-~~L~~L~l~~n~i~~----~~~~~l 139 (869)
+|++|+|++|.+....+..+..+.+ |++|++++|++.+. .+ ...+..+ ++|+.|++++|.+++ ..+..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999988666777776666 99999999988621 11 1223445 667777777777662 233345
Q ss_pred cCCCCCcEEEccCCccccc----cCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 140 SNASNLELLELRDNQFIGK----MSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 140 ~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
..+++|++|++++|.+++. .+..+..+++|++|++++|.++..... .+...+..+++|++|++++|.+++
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--ALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--HHHHHhcccCCCCEEecCCCcCch
Confidence 5666677777777766531 122234445667777776666543322 223345556666666666666654
No 442
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.77 E-value=6.8e-20 Score=192.35 Aligned_cols=253 Identities=24% Similarity=0.289 Sum_probs=163.0
Q ss_pred CCCCCeeeeecceEEEEEEECCC---CeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEE-------Eeeccc
Q 002897 556 FSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIIT-------ICSSID 624 (869)
Q Consensus 556 y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~-------~~~~~~ 624 (869)
+.+.+..+..+++.++..+...+ ...++.|..+...-.......+++-.+.-. .|+..+. .+ ......
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~-~d~~~s~~~~~~~~~ 324 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSIL-EDLRPSLFESSKRNK 324 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccc-cCCCCchhhhccccc
Confidence 44455566666666655444322 233444443332212223334444444333 3443322 22 111111
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
.....+.+|.|++|+..+|.+|+...+.. ...++.....++.|++.|++| + +.+|+|+||.||++..+.++
T Consensus 325 v~~~~~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~ 395 (516)
T KOG1033|consen 325 VGKKVYLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQL 395 (516)
T ss_pred cccccchhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhh
Confidence 11234578999999999999999865542 347888899999999999999 6 89999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTL 783 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~ 783 (869)
||+|||+......... ............||..||+||++.+..|+.|+||||||++++|+++ -..+|+ .....
T Consensus 396 kIgDFgl~ts~~~~~~--~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e----r~~t~ 469 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDET--VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE----RIATL 469 (516)
T ss_pred hhhhhhheeecccCCc--ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH----HHHhh
Confidence 9999999987765541 1112234566789999999999999999999999999999999997 333322 22222
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
.+.....+++ ..+. +. +.-+.++.+++...|.+||++.++.
T Consensus 470 ~d~r~g~ip~--------~~~~------------------d~-p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 470 TDIRDGIIPP--------EFLQ------------------DY-PEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hhhhcCCCCh--------HHhh------------------cC-cHHHHHHHHhcCCCcccCchHHHHh
Confidence 2222222221 1111 11 1224788899999999999655543
No 443
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=5.8e-18 Score=171.02 Aligned_cols=144 Identities=17% Similarity=0.155 Sum_probs=113.2
Q ss_pred hcCCCCCCeeeeecceEEEEEE-ECCCCeEEEEEEeecccch------------------------hhHHHHHHHHHHHh
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGI-IGENGMLVAVKVLNLMQKG------------------------ALKSFLTECEALRS 607 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 607 (869)
...|++.+.||+|++|.||+|. +..+|+.||+|+++..... ....+.+|++.+++
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3458889999999999999999 6568999999998643210 11235789999999
Q ss_pred CCCC--ccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 002897 608 IRHR--NLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP 685 (869)
Q Consensus 608 l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 685 (869)
+.+. .+.+++++ ...++||||++++++..+..... .....++..++.|++.++++||+. +
T Consensus 107 L~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g 168 (237)
T smart00090 107 LYEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---G 168 (237)
T ss_pred HHhcCCCCCeeeEe---------cCceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---C
Confidence 9753 34445543 23479999999988876653322 255667789999999999999999 8
Q ss_pred -eEecCCCCCceeecCCCcEEEccccccccC
Q 002897 686 -VVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 686 -ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
++|||+||+||+++ ++.++|+|||.|...
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999999 889999999998744
No 444
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=5e-20 Score=198.70 Aligned_cols=277 Identities=20% Similarity=0.236 Sum_probs=161.2
Q ss_pred EEeccCCcCc-cccCcccccCcCCCEEEccCCccCc----cCCccccCCCCCCEEeCcCcccCc------cCCcccccCC
Q 002897 26 NLSLAENHLT-GQLPVSIGNLSALQVIDIRGNRLGG----KIPDTLGQLRKLIYLNIGRNQFSG------FIPPSIYNIS 94 (869)
Q Consensus 26 ~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~L~~n~i~~------~~p~~~~~l~ 94 (869)
.|+|..+.++ ......|..+.+|++|++++|.++. .++..+...++|++|+++++.+.+ .++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5778888887 4556667888889999999998853 245566778889999999988762 2345566777
Q ss_pred CCcEEECcCCcCcccCCchhhcCCcc---hhhhhccccccce----eccccccCC-CCCcEEEccCCccccccCcCccCC
Q 002897 95 SFEFIFLQSNRFHGSLPFDMVANLPN---LRKFVAAKNNLTG----FLPISLSNA-SNLELLELRDNQFIGKMSINFNSL 166 (869)
Q Consensus 95 ~L~~L~Ls~N~l~~~~~~~~~~~l~~---L~~L~l~~n~i~~----~~~~~l~~l-~~L~~L~L~~N~i~~~~~~~~~~l 166 (869)
+|+.|++++|.+.+..+ ..+..+.+ |++|++++|+++. .+...+..+ ++|+.|++++|.+
T Consensus 82 ~L~~L~l~~~~~~~~~~-~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l----------- 149 (319)
T cd00116 82 GLQELDLSDNALGPDGC-GVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRL----------- 149 (319)
T ss_pred ceeEEEccCCCCChhHH-HHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcC-----------
Confidence 88888888888763222 23333333 5555555555541 112233333 4455555555544
Q ss_pred CCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCC----ChhhhhccccceEEEecCCccccc----C
Q 002897 167 KNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLL----PHSLANLSNTMTTIDIGGNYFSGT----I 238 (869)
Q Consensus 167 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~~L~~L~l~~n~l~~~----~ 238 (869)
+..... .+...+..+++|++|++++|.+++.. +..+.... .|+.|++++|.+++. +
T Consensus 150 -------------~~~~~~--~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~-~L~~L~L~~n~i~~~~~~~l 213 (319)
T cd00116 150 -------------EGASCE--ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANC-NLEVLDLNNNGLTDEGASAL 213 (319)
T ss_pred -------------CchHHH--HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCC-CCCEEeccCCccChHHHHHH
Confidence 421111 12223444455555555555554321 11122222 255555555555422 2
Q ss_pred CccccCCCCCCeeecccCcceecCCcccc-----CCCCCCEEEccCccccC----cCCCCCCCCccccceeccccccccc
Q 002897 239 PPGLGNLVHLNSIAMEGNQLIGTVPPEIG-----WLKNLQSLYLNSNFLHG----YIPSSLGNLTMLTLLALEINNLQGK 309 (869)
Q Consensus 239 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~ 309 (869)
+..+..+++|++|++++|.+.+.....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.++..
T Consensus 214 ~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 214 AETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 23455667777777777776642222221 23678888888887762 2223445567788888888888743
Q ss_pred ----CCcCccCc-cccceeeccCccc
Q 002897 310 ----IPSSLGNC-TSLIMLTLSKNKL 330 (869)
Q Consensus 310 ----~~~~~~~l-~~L~~L~l~~N~l 330 (869)
....+... +.|++|++.+|.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 294 GAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHHHHHHhhcCCchhhcccCCCCC
Confidence 34444455 6788888887753
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=5.3e-18 Score=195.13 Aligned_cols=201 Identities=20% Similarity=0.276 Sum_probs=154.8
Q ss_pred HHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC---CCccceEEEEeeccc
Q 002897 548 KLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR---HRNLIKIITICSSID 624 (869)
Q Consensus 548 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 624 (869)
+.......|.+.+.+|+|+||+||+|... +|+.||+|+-+.... -+|.--.+++.+++ -+.|+++...+..
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~-~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~-- 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHS-NGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVF-- 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecC-CCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHcc--
Confidence 34455678999999999999999999997 499999998754332 11222223344443 2333333333221
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC----
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---- 700 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---- 700 (869)
.+.-++|+||.+.|+|.+++...+ .++|.-++.++.|++..+++||.. +||||||||+|+|+..
T Consensus 766 ---~~~S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~ 833 (974)
T KOG1166|consen 766 ---QNASVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICA 833 (974)
T ss_pred ---CCcceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCC
Confidence 255689999999999999999544 389999999999999999999999 9999999999999943
Q ss_pred ---CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCC
Q 002897 701 ---DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRP 772 (869)
Q Consensus 701 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~p 772 (869)
..-++|+|||.|..+.--.. .......++|-.+-.+|...|.+++..+|-|.++.+++-|+.|+..
T Consensus 834 ~~~~~~l~lIDfG~siDm~lfp~------~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 834 DSDSKGLYLIDFGRSIDMKLFPD------GTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CCcccceEEEecccceeeeEcCC------CcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 23689999999976543221 1234567789999999999999999999999999999999999754
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.4e-18 Score=186.05 Aligned_cols=226 Identities=25% Similarity=0.259 Sum_probs=174.5
Q ss_pred eeeeecceEEEEEEE---CCCCeEEEEEEeecccch--hhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEEEE
Q 002897 561 MVGQGSFGTVFKGII---GENGMLVAVKVLNLMQKG--ALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
.+|+|.||.|++++. .+.|..+|.|+....... .......|..++..++ ||.++++...+ +.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-----qt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-----QTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee-----ccccchhHh
Confidence 378999999987654 346778999988543211 1125567888888886 99999987764 345788999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
++|..+|.+...+..... +.+.........++-|++++|+. +++|||+|++||+++.+|++++.|||.++.
T Consensus 76 ld~~rgg~lft~l~~~~~------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVM------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccCCc------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 999999999998887654 67888888899999999999999 999999999999999999999999999986
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
.-... ..+||..|||||++. ....++|-||||++++||+||..||.. +....+..
T Consensus 147 ~v~~~------------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---------~~~~~Il~-- 201 (612)
T KOG0603|consen 147 AVKEK------------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---------DTMKRILK-- 201 (612)
T ss_pred hHhhh------------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---------HHHHHHhh--
Confidence 54322 116899999999988 467789999999999999999999975 11111110
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
.+...+.+......+++..++..+|.+|.-.
T Consensus 202 ----------------------~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 202 ----------------------AELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ----------------------hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 0111223445566788888888999888754
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=2.7e-16 Score=156.00 Aligned_cols=144 Identities=22% Similarity=0.211 Sum_probs=111.7
Q ss_pred HHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch----------------------hhHHHHHHHHHH
Q 002897 548 KLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG----------------------ALKSFLTECEAL 605 (869)
Q Consensus 548 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l 605 (869)
++.....-|.+.+.||+|+||.||+|... +|+.||||+++..... .......|+.++
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 33344445888899999999999999985 8999999987532210 112357788899
Q ss_pred HhCCCC--ccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 002897 606 RSIRHR--NLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCK 683 (869)
Q Consensus 606 ~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~ 683 (869)
.++.|+ .+...++. ...++||||+++++|.+.... .....++.+++.++.++|+.
T Consensus 88 ~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~-- 144 (198)
T cd05144 88 KALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH-- 144 (198)
T ss_pred HHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC--
Confidence 988777 44444442 345899999999998765321 23467889999999999999
Q ss_pred CCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 684 PPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 684 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
+|+||||||+||++++++.++|+|||.+....
T Consensus 145 -gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 -GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred -CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999996543
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=2.8e-16 Score=179.90 Aligned_cols=144 Identities=22% Similarity=0.289 Sum_probs=112.6
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec--cc------chhhHHHHHHHHHHHhCCCCccceEE
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL--MQ------KGALKSFLTECEALRSIRHRNLIKII 617 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~------~~~~~~~~~E~~~l~~l~h~niv~~~ 617 (869)
+.........|...+.||+|+||+||+|.+. +..+++|+... .. ....+++.+|+++++.++|++++...
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 3333444456677899999999999999984 44455544311 11 11235688999999999999998877
Q ss_pred EEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 618 TICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
.++... ...++||||+++++|.+++. ....++.|++++++|||+. +++|||+||+||+
T Consensus 403 ~~~~~~-----~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NIL 460 (535)
T PRK09605 403 IYDVDP-----EEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFI 460 (535)
T ss_pred EEEEeC-----CCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEE
Confidence 665432 45689999999999999875 2467899999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccccc
Q 002897 698 LDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~ 714 (869)
+ .++.++|+|||+++.
T Consensus 461 l-~~~~~~liDFGla~~ 476 (535)
T PRK09605 461 V-RDDRLYLIDFGLGKY 476 (535)
T ss_pred E-ECCcEEEEeCccccc
Confidence 9 678999999999964
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=5.1e-16 Score=156.20 Aligned_cols=133 Identities=19% Similarity=0.302 Sum_probs=110.2
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccc--------hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--------GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+.||+|++|.||+|.+ .|..|++|+...... .....+.+|++++..+.|+++.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999998 788899998643211 1124578899999999999887666654432 557
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++|++|.+++.... + .+..++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986432 2 7889999999999999999 999999999999999 78999999998
Q ss_pred cc
Q 002897 712 AK 713 (869)
Q Consensus 712 a~ 713 (869)
+.
T Consensus 141 a~ 142 (211)
T PRK14879 141 AE 142 (211)
T ss_pred cc
Confidence 85
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=3.6e-17 Score=183.84 Aligned_cols=216 Identities=25% Similarity=0.294 Sum_probs=146.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|..++.+..|+||.||.++++.+.+.+|+|+=+. . .|++ ||..+.+ ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~-----------lilR-----nilt~a~-----------npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-N-----------LILR-----NILTFAG-----------NPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-c-----------hhhh-----ccccccC-----------Ccc
Confidence 4689999999999999999999998999999964321 1 1111 1222111 112
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
.| |+-...++..+. ++. +++.+++|+|+. ||+|||+||+|.+|+.-|++|++|||++
T Consensus 134 vv------gDc~tllk~~g~------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 134 VV------GDCATLLKNIGP------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ee------chhhhhcccCCC------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 22 444455544332 332 237899999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCc------ccc-CCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 713 KFLPARPLDTV------VET-PSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 713 ~~~~~~~~~~~------~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
+.......... ... .-.....+||+.|+|||++....|+..+|-|++|+|+||.+.|+.||.+...++. +..
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~ 269 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQ 269 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhh
Confidence 75432211100 001 1123456899999999999999999999999999999999999999986543311 111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM 845 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 845 (869)
++...+ .+.+ ..+..+.+..+++.+.++.+|..|-
T Consensus 270 visd~i--~wpE-----------------------~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 270 VISDDI--EWPE-----------------------EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhc--cccc-----------------------cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 111110 0000 1123345677899999999999995
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=1.2e-15 Score=151.81 Aligned_cols=130 Identities=22% Similarity=0.345 Sum_probs=103.4
Q ss_pred eeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 561 MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.||+|++|.||+|.+ +|..|++|+..... .....++.+|+++++.+.|+++.....++.. ....+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-----PDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-----CCCCE
Confidence 479999999999996 78899999864221 1123567889999999988765444333322 24468
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++|++|.+++.... . .++.+++.+++++|+. +++|||++|+||+++ ++.++++|||.+
T Consensus 74 lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999999875421 1 7899999999999999 999999999999999 889999999998
Q ss_pred cc
Q 002897 713 KF 714 (869)
Q Consensus 713 ~~ 714 (869)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 63
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=7.5e-15 Score=144.58 Aligned_cols=136 Identities=22% Similarity=0.264 Sum_probs=98.6
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccch--hhHH----------------------HHHHHHHHHhCCCC--c
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG--ALKS----------------------FLTECEALRSIRHR--N 612 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~--n 612 (869)
.+.||+|+||+||+|.+. +|+.||||+++..... .... ...|.+.+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 578999999999999986 8999999998643211 1111 13556666666433 3
Q ss_pred cceEEEEeeccccCCCceEEEEeecccCCCHHHH-HhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecC
Q 002897 613 LIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEW-LHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGD 690 (869)
Q Consensus 613 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~D 690 (869)
+.+.+++ ...++||||++++++... +.... .. .+...++.+++.++.++|+ . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444443 335899999999554221 11110 11 5678899999999999999 7 999999
Q ss_pred CCCCceeecCCCcEEEccccccccCC
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
+||+||+++ ++.++++|||.+....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred CChhhEEEE-CCcEEEEECccccccc
Confidence 999999999 8999999999997543
No 453
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=2.3e-14 Score=145.20 Aligned_cols=139 Identities=19% Similarity=0.149 Sum_probs=107.0
Q ss_pred CCeee-eecceEEEEEEECCCCeEEEEEEeeccc-------------chhhHHHHHHHHHHHhCCCCcc--ceEEEEeec
Q 002897 559 SNMVG-QGSFGTVFKGIIGENGMLVAVKVLNLMQ-------------KGALKSFLTECEALRSIRHRNL--IKIITICSS 622 (869)
Q Consensus 559 ~~~lg-~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~ 622 (869)
...|| .||.|+||.+.. .+..+|||.+.... .....++.+|++++.++.|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 45788 899999999988 58889999885311 1223567899999999988775 667766433
Q ss_pred cccCCCceEEEEeecccC-CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 623 IDFNGVDFKAIVYDFMQN-GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
. .......++||||+++ .+|.+++.... ++.. .+.+++.++++||+. ||+||||||.|||++.+
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 2 1111234699999997 69999886532 4443 356899999999999 99999999999999999
Q ss_pred CcEEEcccccccc
Q 002897 702 MVAHVGDFGLAKF 714 (869)
Q Consensus 702 ~~~kl~Dfg~a~~ 714 (869)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998864
No 454
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.56 E-value=4.8e-16 Score=176.42 Aligned_cols=258 Identities=22% Similarity=0.283 Sum_probs=191.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-CCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-ENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 628 (869)
...|...+.||+|+|+.|-.+... .....+|+|.+.... ....+....|..+-+.+. |+|++++++.... .
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~-----~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS-----P 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC-----C
Confidence 346788888999999999888774 234556777765433 333455667888888886 9999999998554 4
Q ss_pred ceEEEEeecccCCCHHHHH-hhCCCcccccCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCceeecCCC-cEE
Q 002897 629 DFKAIVYDFMQNGSLEEWL-HQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH-HHCKPPVVHGDLKPSNVLLDHDM-VAH 705 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~k 705 (869)
+..+++++|..++++.+-+ +.... ..+......++.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~-----~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDST-----GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred cccccccCcccccccccccccCCcc-----CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 7889999999999999888 43321 2566677888999999999999 77 999999999999999999 999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccC-cccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKG-TVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
++|||+|..+.... ..........| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++.........
T Consensus 166 ~~df~~At~~~~~~-----g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~ 240 (601)
T KOG0590|consen 166 IADFGLATAYRNKN-----GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY 240 (601)
T ss_pred CCCchhhccccccC-----CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc
Confidence 99999998876621 11233445567 9999999998885 45778899999999999999999998655544333
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..|...... .. ............+++.+++..+|+.|.+.+++..
T Consensus 241 ~~~~~~~~~------~~------------------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 241 SSWKSNKGR------FT------------------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred eeecccccc------cc------------------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 333222100 00 0011122334568888999999999999888743
No 455
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.54 E-value=4.8e-14 Score=133.86 Aligned_cols=135 Identities=20% Similarity=0.232 Sum_probs=111.1
Q ss_pred CCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCC--CccceEEEEeeccccCCCceEEEEe
Q 002897 558 SSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRH--RNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.+.+|+|.++.||++... +..+++|....... ...+.+|+.+++.++| ..+++++++... .+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~-----~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGES-----DGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC-----CCccEEEE
Confidence 4578999999999999984 47899999865433 4678899999999976 588888887543 26789999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
||++++.+..+ +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.+..
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99988766543 3456678899999999999996444799999999999999989999999999864
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.51 E-value=2.4e-14 Score=165.44 Aligned_cols=119 Identities=35% Similarity=0.604 Sum_probs=103.3
Q ss_pred cccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccc
Q 002897 368 NLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLS 447 (869)
Q Consensus 368 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~ 447 (869)
.++.|+|++|.+++.+|..++.+++|+.|+|++|+|+|.+|..++.+++|+.|+|++|+++|.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccCCCC--CccCCCccccccCCcccCCCCCCCCCCCCCC
Q 002897 448 YNHFEGEVPKK--GVFSNKTRFSLSGNGKLCGGLDEFHLPSCPS 489 (869)
Q Consensus 448 ~N~l~~~~~~~--~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~~ 489 (869)
+|+++|.+|.. .....+..+.+.+|+.+|+.+. .+.|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCcc
Confidence 99999988864 2234556788999999998543 356754
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=7.2e-16 Score=162.03 Aligned_cols=189 Identities=30% Similarity=0.452 Sum_probs=114.5
Q ss_pred eecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCccc
Q 002897 251 IAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKL 330 (869)
Q Consensus 251 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 330 (869)
.+|+.|++. .+|..+..+..|..+.|++|.+. .+|..++++..|++|+|+.|+++ .+|..++.|+ |+.|-+++|++
T Consensus 80 aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 344444443 44444444444555555555554 44555555555555555555555 4555555544 55555555555
Q ss_pred CCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCcc
Q 002897 331 DGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPS 410 (869)
Q Consensus 331 ~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 410 (869)
+ .+|+.+. ....+..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|..++ .-.|..||+|.|+++ .+|-+
T Consensus 156 ~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 156 T-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred c-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCcee-ecchh
Confidence 4 4455544 3333344555555554 56777788888888888888887 6777777 445778888888887 77888
Q ss_pred ccccccccEEEccCCcccCCCccccccccc---cCeecccccc
Q 002897 411 LNFLKSIKVLDLSSNKLSGQIPKYLENLSF---LEYLNLSYNH 450 (869)
Q Consensus 411 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~l~l~~N~ 450 (869)
|..|+.|++|-|.+|.|+ ..|..++..-. .++|+..-++
T Consensus 230 fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred hhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 888888888888888887 66666653332 3556665553
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.48 E-value=1.2e-15 Score=160.33 Aligned_cols=178 Identities=31% Similarity=0.423 Sum_probs=161.7
Q ss_pred CCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccce
Q 002897 268 WLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLF 347 (869)
Q Consensus 268 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~ 347 (869)
.+..-...+|+.|++. .+|..++.+..|+.+.|.+|.+. .+|..++.+..|+.|||+.|++. .+|..++.+. ++-
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp--Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP--LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc--cee
Confidence 3555667899999998 88999999999999999999998 89999999999999999999998 7888877665 345
Q ss_pred ecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcc
Q 002897 348 LNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKL 427 (869)
Q Consensus 348 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 427 (869)
|-+++|+++ .+|+.++.+..|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|..++.| .|..||+|.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 889999998 89999999999999999999998 78999999999999999999998 788888866 588999999999
Q ss_pred cCCCccccccccccCeeccccccCcccC
Q 002897 428 SGQIPKYLENLSFLEYLNLSYNHFEGEV 455 (869)
Q Consensus 428 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~ 455 (869)
+ .+|-.|.+|..|++|-|.+|+|...+
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 8 89999999999999999999998543
No 459
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=1.3e-14 Score=142.65 Aligned_cols=161 Identities=24% Similarity=0.402 Sum_probs=125.0
Q ss_pred HHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 002897 605 LRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKP 684 (869)
Q Consensus 605 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~ 684 (869)
+-.+.|.|+|++..|+.+....+.....++.|||+.|++.+++++.... ...+......+|+-||..||.|||+. .|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--QKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--hhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 4455799999999999887776777888999999999999999886543 23478888999999999999999995 89
Q ss_pred CeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHH
Q 002897 685 PVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLL 764 (869)
Q Consensus 685 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ 764 (869)
+|+|+++..+-|++..+|-+|++--........-... .......-.+-++|.|||.-.....+.++|||+||....
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~----~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNST----REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhh----hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 9999999999999999998888532221111100000 001122334678999999877777888999999999999
Q ss_pred HHHcCCCC
Q 002897 765 EMFSRRRP 772 (869)
Q Consensus 765 el~tg~~p 772 (869)
||..|..-
T Consensus 274 emailEiq 281 (458)
T KOG1266|consen 274 EMAILEIQ 281 (458)
T ss_pred HHHHheec
Confidence 99988754
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.5e-13 Score=152.38 Aligned_cols=175 Identities=30% Similarity=0.448 Sum_probs=78.1
Q ss_pred cCCcCEEeccCCcCccccCcccccCc-CCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 21 LFKLENLSLAENHLTGQLPVSIGNLS-ALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
++.++.|++.+|.++ .++.....+. +|++|++++|.+. .+|..++.+++|+.|++++|++. .+|...+.+++|+.|
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L 191 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNL 191 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhe
Confidence 344555555555555 3333344442 5555555555554 33344445555555555555554 333333344555555
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHL 179 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 179 (869)
++++|++. .+|.. ...+..|++|.+++|.+. ..+..+.++.++..|.+.+|++... +..+..+++++.|++++|.+
T Consensus 192 ~ls~N~i~-~l~~~-~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 192 DLSGNKIS-DLPPE-IELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PESIGNLSNLETLDLSNNQI 267 (394)
T ss_pred eccCCccc-cCchh-hhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cchhccccccceeccccccc
Confidence 55555554 44421 122233455555555322 2233444444444444444444321 23344444444444444444
Q ss_pred CCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 180 GNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
+.++. +..+.+|++|++++|.+.
T Consensus 268 ~~i~~--------~~~~~~l~~L~~s~n~~~ 290 (394)
T COG4886 268 SSISS--------LGSLTNLRELDLSGNSLS 290 (394)
T ss_pred ccccc--------ccccCccCEEeccCcccc
Confidence 44331 334444444444444444
No 461
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.42 E-value=1.1e-12 Score=144.90 Aligned_cols=162 Identities=17% Similarity=0.249 Sum_probs=110.0
Q ss_pred cCCCcccHHHHHHHhc------------CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhh-----------
Q 002897 539 QQFPMISYAKLSKATS------------EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGAL----------- 595 (869)
Q Consensus 539 ~~~~~~~~~~~~~~~~------------~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------- 595 (869)
...|.++++++..... .|. .+.||.|++|.||+|+.. +|+.||||+.+..-....
T Consensus 91 d~v~p~~~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~ 168 (437)
T TIGR01982 91 DRVPPFDFKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLA 168 (437)
T ss_pred cCCCCCCHHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHH
Confidence 4556666655544332 233 368999999999999986 899999999854311100
Q ss_pred -----------------------------HHHHHHHHHHHhC----CCCccceEEEEeeccccCCCceEEEEeecccCCC
Q 002897 596 -----------------------------KSFLTECEALRSI----RHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGS 642 (869)
Q Consensus 596 -----------------------------~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs 642 (869)
-.+.+|+..+.++ +|..-+.+-.++.+. ....++||||++|++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~ 244 (437)
T TIGR01982 169 RIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDR----TSERVLTMEWIDGIP 244 (437)
T ss_pred HHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh----cCCceEEEEeECCcc
Confidence 0244566655555 233333333333221 244689999999999
Q ss_pred HHHHHhhCCCcccccCCCHHHHHHHHHHHHH-HHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCC
Q 002897 643 LEEWLHQNNDKLEVCNLSLIQTLNIAIDVAS-AIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 643 L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 717 (869)
|.++....... . ....++.+++. .+..+|.. |++|+|+||.||+++.++.++++|||++..+++
T Consensus 245 L~~~~~~~~~~-----~---~~~~ia~~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 245 LSDIAALDEAG-----L---DRKALAENLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred cccHHHHHhcC-----C---CHHHHHHHHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 98876543211 2 23456666666 47888998 999999999999999999999999999976643
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=3.3e-13 Score=145.61 Aligned_cols=253 Identities=24% Similarity=0.279 Sum_probs=184.4
Q ss_pred cCCCCCCeeee--ecceEEEEEEE--CCCCeEEEEEEeec--ccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 554 SEFSSSNMVGQ--GSFGTVFKGII--GENGMLVAVKVLNL--MQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 554 ~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
..|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+. .......+-.+|+...+++ .|++.++.... ++
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e 188 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WE 188 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----cc
Confidence 34667788999 99999999998 88999999998532 2223334456777777777 59999985555 45
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCceeecCC-
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVAS----AIEYLHHHCKPPVVHGDLKPSNVLLDHD- 701 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 701 (869)
+.+..++-+|++. .++.++.+..... ++....+....+..+ |+.++|+. +++|-|+||.||+...+
T Consensus 189 ~~~~lfiqtE~~~-~sl~~~~~~~~~~-----~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~ 259 (524)
T KOG0601|consen 189 GSGILFIQTELCG-ESLQSYCHTPCNF-----LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDW 259 (524)
T ss_pred cCCcceeeecccc-chhHHhhhccccc-----CCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccc
Confidence 5688899999985 6899888876543 777888888888888 99999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
...+++|||+...+......... .......|...|++||...+ -++.++||||+|.++.+..+|..+.......
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~---~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-- 333 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVF---KVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS-- 333 (524)
T ss_pred ceeecCCcceeEEccCCccccce---eeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC--
Confidence 78999999999888776532211 12233367889999998765 6788999999999999999988775432111
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+.+.....++.+ ..+....++...+..|++.+|..|++++++.+
T Consensus 334 ~W~~~r~~~ip~e--------------------------~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 334 SWSQLRQGYIPLE--------------------------FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred CccccccccCchh--------------------------hhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111111111110 11112234445888999999999999877654
No 463
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.37 E-value=3.9e-13 Score=149.16 Aligned_cols=178 Identities=39% Similarity=0.603 Sum_probs=82.8
Q ss_pred CCCCeeecccCcceecCCccccCCC-CCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceee
Q 002897 246 VHLNSIAMEGNQLIGTVPPEIGWLK-NLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLT 324 (869)
Q Consensus 246 ~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 324 (869)
+.++.|++.+|.+. .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 44444444444444 3333333342 5555555555554 33344455555555555555555 3444344555555555
Q ss_pred ccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCcccc
Q 002897 325 LSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFS 404 (869)
Q Consensus 325 l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 404 (869)
+++|++. .+|... .....+..|.+++|.+. ..+..+.++.++..|.+++|++. .++..+..+++|+.|++++|+++
T Consensus 193 ls~N~i~-~l~~~~-~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 193 LSGNKIS-DLPPEI-ELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred ccCCccc-cCchhh-hhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 5555554 222211 11111222333333211 23444555555555555555554 33445555555555555555555
Q ss_pred CCCCccccccccccEEEccCCcccCCCc
Q 002897 405 GSIPPSLNFLKSIKVLDLSSNKLSGQIP 432 (869)
Q Consensus 405 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p 432 (869)
.++. ++.+.+++.|++++|.+...+|
T Consensus 269 -~i~~-~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 269 -SISS-LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred -cccc-ccccCccCEEeccCccccccch
Confidence 2222 5555555555555555554333
No 464
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.35 E-value=4e-13 Score=126.54 Aligned_cols=142 Identities=25% Similarity=0.358 Sum_probs=44.1
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccc-cCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIG-NLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
|..|..+.|. .+|... +..+++.|+|++|.|+. +. .++ .+.+|+.|+|++|.|+. ++ .+..+++|++|+|++
T Consensus 1 ~~~lt~~~i~-~~~~~~--n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~ 73 (175)
T PF14580_consen 1 MVRLTANMIE-QIAQYN--NPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSN 73 (175)
T ss_dssp ----------------------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--S
T ss_pred Cccccccccc-cccccc--ccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCC
Confidence 5567778888 788766 35688999999999984 32 455 57889999999999984 33 478889999999999
Q ss_pred cccCccCCccc-ccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccc
Q 002897 80 NQFSGFIPPSI-YNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGK 158 (869)
Q Consensus 80 n~i~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~ 158 (869)
|+|+.+ +..+ ..+++|++|+|++|+|. .+.. -..+..+++|+.|+|.+|.+...
T Consensus 74 N~I~~i-~~~l~~~lp~L~~L~L~~N~I~-~l~~-----------------------l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 74 NRISSI-SEGLDKNLPNLQELYLSNNKIS-DLNE-----------------------LEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp S---S--CHHHHHH-TT--EEE-TTS----SCCC-----------------------CGGGGG-TT--EEE-TT-GGGGS
T ss_pred CCCCcc-ccchHHhCCcCCEEECcCCcCC-ChHH-----------------------hHHHHcCCCcceeeccCCcccch
Confidence 999854 4444 46888999999999886 3221 12344556666666666666432
Q ss_pred cC---cCccCCCCCCEEEc
Q 002897 159 MS---INFNSLKNLSVLIL 174 (869)
Q Consensus 159 ~~---~~~~~l~~L~~L~l 174 (869)
.. ..+..+++|+.||-
T Consensus 129 ~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 129 KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TTHHHHHHHH-TT-SEETT
T ss_pred hhHHHHHHHHcChhheeCC
Confidence 11 12455677777653
No 465
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.34 E-value=1.9e-11 Score=117.76 Aligned_cols=138 Identities=18% Similarity=0.176 Sum_probs=101.7
Q ss_pred CCeeeeecceEEEEEEECC------CCeEEEEEEeeccc----------------------chhhHHH----HHHHHHHH
Q 002897 559 SNMVGQGSFGTVFKGIIGE------NGMLVAVKVLNLMQ----------------------KGALKSF----LTECEALR 606 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~------~~~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~ 606 (869)
...||.|--+.||.|.... .+..+|||+++... ....+.+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998753 35899999985211 0112223 48999999
Q ss_pred hCC--CCccceEEEEeeccccCCCceEEEEeecccCCCHHH-HHhhCCCcccccCCCHHHHHHHHHHHHHHHHHH-HhcC
Q 002897 607 SIR--HRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEE-WLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYL-HHHC 682 (869)
Q Consensus 607 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~ 682 (869)
++. .-++..++++ ...++||||+.+..+.. .++.. .++..+...+..+++.+|..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 984 3567777765 44689999997654422 22221 245566778889999999999 787
Q ss_pred CCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 683 KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 683 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
++||||+++.||+++ ++.++++|||.|....
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 999999999999996 5689999999987554
No 466
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.33 E-value=4.9e-12 Score=140.73 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=97.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch----------------------------------hhH---
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG----------------------------------ALK--- 596 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~--- 596 (869)
.+|+. +.||+|++|+||+|+.+.+|+.||||+.+..-.. ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35776 7999999999999999867999999999643110 011
Q ss_pred ---HHHHHHHHHHhC----CCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHH
Q 002897 597 ---SFLTECEALRSI----RHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAI 669 (869)
Q Consensus 597 ---~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~ 669 (869)
++.+|+..+.++ .+...+.+-.++.+. ....++||||++|+.+.++-.-.....+...+....+..++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 134444444444 243334433333221 245789999999999987532111110011133333334444
Q ss_pred HHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----cEEEccccccccCCCC
Q 002897 670 DVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM----VAHVGDFGLAKFLPAR 718 (869)
Q Consensus 670 ~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfg~a~~~~~~ 718 (869)
|+ +.. |++|+|+||.||+++.++ +++++|||++..++..
T Consensus 275 Qi-------f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 275 QV-------FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HH-------HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 44 345 999999999999999988 9999999999877543
No 467
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.31 E-value=3.2e-14 Score=141.71 Aligned_cols=141 Identities=21% Similarity=0.291 Sum_probs=105.7
Q ss_pred CCCccccceeccccccccc----CCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCC
Q 002897 291 GNLTMLTLLALEINNLQGK----IPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNL 366 (869)
Q Consensus 291 ~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l 366 (869)
..-+.|+++....|++... +...|...+.|+.+.++.|.+. |++. ..+...+..+
T Consensus 154 ~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~---~eG~------------------~al~eal~~~ 212 (382)
T KOG1909|consen 154 ASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIR---PEGV------------------TALAEALEHC 212 (382)
T ss_pred CCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEeccccc---Cchh------------------HHHHHHHHhC
Confidence 3446688888888887632 3346677788888888888875 2222 0234578899
Q ss_pred ccccccccccccccc----cCCccccCCCCCcEEEeeCccccCCCCcccc-----ccccccEEEccCCcccC----CCcc
Q 002897 367 KNLVQLDISGNRFSG----DIPGTLSACTSLEYVKMQDNSFSGSIPPSLN-----FLKSIKVLDLSSNKLSG----QIPK 433 (869)
Q Consensus 367 ~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~----~~p~ 433 (869)
++|+.|||.+|-|+. .+..+++.++.|++|++++|.+......+|. ..++|++|.|.+|.++. .+..
T Consensus 213 ~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~ 292 (382)
T KOG1909|consen 213 PHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAA 292 (382)
T ss_pred CcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHH
Confidence 999999999999873 3455678899999999999999876554442 36899999999999983 3444
Q ss_pred ccccccccCeeccccccCc
Q 002897 434 YLENLSFLEYLNLSYNHFE 452 (869)
Q Consensus 434 ~~~~l~~L~~l~l~~N~l~ 452 (869)
.+...+.|..|+|++|++.
T Consensus 293 ~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 293 CMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHhcchhhHHhcCCccccc
Confidence 5666889999999999984
No 468
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.28 E-value=4.3e-13 Score=133.77 Aligned_cols=256 Identities=20% Similarity=0.235 Sum_probs=128.3
Q ss_pred ccCCcCEEeccCCcCc----cccCcccccCcCCCEEEccCC---ccCccCCcc-------ccCCCCCCEEeCcCcccCcc
Q 002897 20 YLFKLENLSLAENHLT----GQLPVSIGNLSALQVIDIRGN---RLGGKIPDT-------LGQLRKLIYLNIGRNQFSGF 85 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~----~~~~~~~~~l~~L~~L~L~~n---~i~~~~p~~-------~~~l~~L~~L~L~~n~i~~~ 85 (869)
....++.|+|++|.+. ..+.+.+.+.++|+..++|+- ++...+|.+ +...++|++||||+|.+...
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 3456777777777775 234455666667777777653 233333332 33445666666666665532
Q ss_pred CCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccC
Q 002897 86 IPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNS 165 (869)
Q Consensus 86 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~ 165 (869)
-+..|. +.+....+|++|.|.+|.+...-...++. .|..|. .|+ ..++
T Consensus 108 g~~~l~---------------------~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~ 155 (382)
T KOG1909|consen 108 GIRGLE---------------------ELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAAS 155 (382)
T ss_pred chHHHH---------------------HHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCC
Confidence 222221 23445566666666666665222222211 122222 111 1223
Q ss_pred CCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCC
Q 002897 166 LKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNL 245 (869)
Q Consensus 166 l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 245 (869)
-++|+++..++|++.+.+.. .++..|...+.|+.+.++.|.|....-. .+..+|..+
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~--~~A~~~~~~~~leevr~~qN~I~~eG~~---------------------al~eal~~~ 212 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGAT--ALAEAFQSHPTLEEVRLSQNGIRPEGVT---------------------ALAEALEHC 212 (382)
T ss_pred CcceEEEEeeccccccccHH--HHHHHHHhccccceEEEecccccCchhH---------------------HHHHHHHhC
Confidence 35667777777777666554 4455677777777777777777522110 111233344
Q ss_pred CCCCeeecccCcceec----CCccccCCCCCCEEEccCccccCcCCCCC-----CCCccccceecccccccc----cCCc
Q 002897 246 VHLNSIAMEGNQLIGT----VPPEIGWLKNLQSLYLNSNFLHGYIPSSL-----GNLTMLTLLALEINNLQG----KIPS 312 (869)
Q Consensus 246 ~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~----~~~~ 312 (869)
++|+.|+|.+|.++.. +...++.+++|++|++++|.+.......| ...++|+.|.|.+|.|+. .+..
T Consensus 213 ~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~ 292 (382)
T KOG1909|consen 213 PHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAA 292 (382)
T ss_pred CcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHH
Confidence 4444444444444321 12233444555555555555543322222 124556666666665551 1223
Q ss_pred CccCccccceeeccCccc
Q 002897 313 SLGNCTSLIMLTLSKNKL 330 (869)
Q Consensus 313 ~~~~l~~L~~L~l~~N~l 330 (869)
.+...+.|..|+|++|.+
T Consensus 293 ~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 293 CMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcchhhHHhcCCcccc
Confidence 344466666777777766
No 469
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=3.2e-11 Score=131.25 Aligned_cols=170 Identities=19% Similarity=0.257 Sum_probs=131.4
Q ss_pred EEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCC
Q 002897 572 KGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNN 651 (869)
Q Consensus 572 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 651 (869)
.|..+.++.+|.|..++...........+-++.++.++||||+++++.+.. ....|+|+|.+. .|..++++
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~-----~~~~ylvTErV~--Pl~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE-----EGTLYLVTERVR--PLETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc-----cCceEEEeeccc--cHHHHHHH--
Confidence 456667899999999876666555667888899999999999999998543 468999999873 57778776
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCC
Q 002897 652 DKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSS 731 (869)
Q Consensus 652 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~ 731 (869)
+....+...+.||+.||.|||+.| +++|++|.-+.|+|++.|+.||++|..+........ ...
T Consensus 101 -------l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--------~~~ 163 (690)
T KOG1243|consen 101 -------LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--------PAK 163 (690)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--------ccc
Confidence 445677888999999999999876 999999999999999999999999998865433211 111
Q ss_pred CccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC
Q 002897 732 GIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR 769 (869)
Q Consensus 732 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg 769 (869)
...--..|..|+.+.... -..|.|-|||+++|++.|
T Consensus 164 ~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 164 SLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 122233466676554332 346999999999999999
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=4e-13 Score=137.54 Aligned_cols=162 Identities=23% Similarity=0.257 Sum_probs=100.0
Q ss_pred ccCcCCCEEEccCCccCccCC--ccccCCCCCCEEeCcCcccCccCC--cccccCCCCcEEECcCCcCcccCCchhhcCC
Q 002897 43 GNLSALQVIDIRGNRLGGKIP--DTLGQLRKLIYLNIGRNQFSGFIP--PSIYNISSFEFIFLQSNRFHGSLPFDMVANL 118 (869)
Q Consensus 43 ~~l~~L~~L~L~~n~i~~~~p--~~~~~l~~L~~L~L~~n~i~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 118 (869)
+++++|+...|.++.+. ..+ .....|++++.||||+|-+....| .....|++|+.|+|+.|++........-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45666777777776665 333 245567777777777776653322 2344567777777777776522222222345
Q ss_pred cchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCC
Q 002897 119 PNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCS 197 (869)
Q Consensus 119 ~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~ 197 (869)
+.|+.|.|+.|.++.. +...+..+++|+.|+|+.|....+......-+..|++|+|++|++-+.+. ......++
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~-----~~~~~~l~ 271 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQ-----GYKVGTLP 271 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccc-----cccccccc
Confidence 6777777777777632 22345566778888888775444555556667777777777777765442 23566777
Q ss_pred CCcEEEccCCCCC
Q 002897 198 KLENLGLYDNQFG 210 (869)
Q Consensus 198 ~L~~L~L~~n~l~ 210 (869)
.|+.|+++.+.+.
T Consensus 272 ~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 272 GLNQLNLSSTGIA 284 (505)
T ss_pred chhhhhccccCcc
Confidence 7777777777766
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=1.3e-12 Score=133.90 Aligned_cols=191 Identities=21% Similarity=0.229 Sum_probs=144.4
Q ss_pred hccCCcCEEeccCCcCccccC--cccccCcCCCEEEccCCccCcc--CCccccCCCCCCEEeCcCcccCccCCcc-cccC
Q 002897 19 CYLFKLENLSLAENHLTGQLP--VSIGNLSALQVIDIRGNRLGGK--IPDTLGQLRKLIYLNIGRNQFSGFIPPS-IYNI 93 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~~~--~p~~~~~l~~L~~L~L~~n~i~~~~p~~-~~~l 93 (869)
+++.+|+...|.+..+. ..+ .....|++++.|||+.|-+..- +-....+|++|+.|+|+.|++....... -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46788999999999988 454 3678899999999999988742 2244678999999999999998433222 2357
Q ss_pred CCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC-cCccCCCCCCEE
Q 002897 94 SSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS-INFNSLKNLSVL 172 (869)
Q Consensus 94 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L 172 (869)
+.|+.|.|+.|.++..--......+|+|+.|+|..|...........-+..|+.|||++|++..... ...+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 8899999999999732222346678999999999996544555566778899999999999865432 346778999999
Q ss_pred EccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 173 ILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 173 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
+++.+.|.++..-+.+.......+++|++|+++.|++.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 99999998876543322333566778888888888875
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=8.1e-13 Score=146.49 Aligned_cols=246 Identities=26% Similarity=0.334 Sum_probs=134.3
Q ss_pred ccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchh
Q 002897 43 GNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLR 122 (869)
Q Consensus 43 ~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 122 (869)
..+..++.+++..|.|+. +-..++.+++|+.|++.+|+|..+ ...+..+.+|++|+|++|.|. .+. .+..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~-~i~--~l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKIT-KLE--GLSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccc-ccc--chhhccchh
Confidence 345556666666666663 233456666666666666666632 233555666666666666665 332 244555566
Q ss_pred hhhccccccceeccccccCCCCCcEEEccCCccccccC-cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcE
Q 002897 123 KFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS-INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLEN 201 (869)
Q Consensus 123 ~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~ 201 (869)
.|++.+|.|+.+ ..+..+++|+.+++++|++..+.+ . ...+.+++.+++++|.+..+.. +..+..+..
T Consensus 144 ~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--------~~~~~~l~~ 212 (414)
T KOG0531|consen 144 ELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--------LDLLKKLVL 212 (414)
T ss_pred hheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--------hHHHHHHHH
Confidence 666666666533 344445566666666666554433 1 3445555555555555544331 222233333
Q ss_pred EEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCC--CCCeeecccCcceecCCccccCCCCCCEEEccC
Q 002897 202 LGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLV--HLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNS 279 (869)
Q Consensus 202 L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 279 (869)
+++..|.++ ...+ +..+. +|+.+++++|.+. ..+..+..+.++..|++.+
T Consensus 213 ~~l~~n~i~-------------------------~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~ 264 (414)
T KOG0531|consen 213 LSLLDNKIS-------------------------KLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSS 264 (414)
T ss_pred hhcccccce-------------------------eccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhh
Confidence 344444443 2211 11112 3666777777765 3334556667777777777
Q ss_pred ccccCcCCCCCCCCccccceeccccccccc---CCc-CccCccccceeeccCcccCCCC
Q 002897 280 NFLHGYIPSSLGNLTMLTLLALEINNLQGK---IPS-SLGNCTSLIMLTLSKNKLDGVL 334 (869)
Q Consensus 280 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~-~~~~l~~L~~L~l~~N~l~~~~ 334 (869)
|++... ..+.....+..+.+..|.+... ... .....+.++.+.+..|.+....
T Consensus 265 n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 265 NRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred cccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccccc
Confidence 777632 2345556667777777776521 111 1555677888888888776443
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=2.1e-11 Score=117.94 Aligned_cols=130 Identities=17% Similarity=0.159 Sum_probs=96.0
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccc-eEEEEeeccccCCCceEEEEeec
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLI-KIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
++.++.|.++.||+++. .++.|++|+...... ....+.+|+.+++.+.+.+++ +++.+.. ...++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEe
Confidence 46789999999999997 588999999754332 223567899999988654444 4554421 234799999
Q ss_pred ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 638 MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC--KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 638 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
+++.++.+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 73 i~G~~l~~~----~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999887543 0 1 11245678999999999982 12359999999999998 6789999999885
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.23 E-value=3.7e-12 Score=120.04 Aligned_cols=132 Identities=27% Similarity=0.347 Sum_probs=49.7
Q ss_pred cccCcCCCEEEccCCccCccCCcccc-CCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcc
Q 002897 42 IGNLSALQVIDIRGNRLGGKIPDTLG-QLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPN 120 (869)
Q Consensus 42 ~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 120 (869)
+.+..++++|+|++|.|+.+ +.++ .+.+|+.|||++|.|+.+ ..+..++.|++|++++|+|+ .++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~--------- 80 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SIS--------- 80 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-C---------
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccc---------
Confidence 44555677777777777733 2344 466777777777777643 23555666666666666665 332
Q ss_pred hhhhhccccccceeccccc-cCCCCCcEEEccCCccccccC-cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCC
Q 002897 121 LRKFVAAKNNLTGFLPISL-SNASNLELLELRDNQFIGKMS-INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSK 198 (869)
Q Consensus 121 L~~L~l~~n~i~~~~~~~l-~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~ 198 (869)
..+ ..+++|++|+|++|+|..... ..+..+++|+.|+|.+|.++.... .-...+..+++
T Consensus 81 ----------------~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~---YR~~vi~~lP~ 141 (175)
T PF14580_consen 81 ----------------EGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKN---YRLFVIYKLPS 141 (175)
T ss_dssp ----------------HHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTT---HHHHHHHH-TT
T ss_pred ----------------cchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhh---HHHHHHHHcCh
Confidence 223 346788888888888865433 457789999999999999986542 23447888999
Q ss_pred CcEEEccC
Q 002897 199 LENLGLYD 206 (869)
Q Consensus 199 L~~L~L~~ 206 (869)
|+.||-..
T Consensus 142 Lk~LD~~~ 149 (175)
T PF14580_consen 142 LKVLDGQD 149 (175)
T ss_dssp -SEETTEE
T ss_pred hheeCCEE
Confidence 99997543
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.23 E-value=1.1e-12 Score=145.43 Aligned_cols=218 Identities=24% Similarity=0.342 Sum_probs=155.2
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+..++.+++..|.|.. +-..+..+++|+.|++.+|+|.. +...+..+++|++|+|++|+|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 46788888899999983 44558889999999999999994 444488899999999999999965 456777889999
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceecc-ccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLP-ISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 178 (869)
++++|.|. .++ .+..+++|+.+++++|.+..+.+ . ...+.+|+.+++.+|.+..+ ..+..+..+..+++..|.
T Consensus 146 ~l~~N~i~-~~~--~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLIS-DIS--GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcch-hcc--CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhccccc
Confidence 99999998 555 36679999999999999986644 2 58889999999999998644 345566677777899999
Q ss_pred CCCCCCCCcchhhhccCCCC--CcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccC
Q 002897 179 LGNRAANDLDFVTVLANCSK--LENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGN 256 (869)
Q Consensus 179 l~~~~~~~~~~~~~l~~l~~--L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 256 (869)
++.+.. +..+.. |+.+++++|++.. .+..+..+.. +..|++.+|.+... ..+.....+..+.+..|
T Consensus 220 i~~~~~--------l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~-l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~ 287 (414)
T KOG0531|consen 220 ISKLEG--------LNELVMLHLRELYLSGNRISR-SPEGLENLKN-LPVLDLSSNRISNL--EGLERLPKLSELWLNDN 287 (414)
T ss_pred ceeccC--------cccchhHHHHHHhcccCcccc-cccccccccc-ccccchhhcccccc--ccccccchHHHhccCcc
Confidence 876653 223333 6777777777763 2222333332 55566666655422 12333444444444444
Q ss_pred cce
Q 002897 257 QLI 259 (869)
Q Consensus 257 ~l~ 259 (869)
.+.
T Consensus 288 ~~~ 290 (414)
T KOG0531|consen 288 KLA 290 (414)
T ss_pred hhc
Confidence 443
No 476
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.22 E-value=7.5e-10 Score=113.45 Aligned_cols=276 Identities=15% Similarity=0.110 Sum_probs=173.0
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccc---cCCCceEE
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSID---FNGVDFKA 632 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~---~~~~~~~~ 632 (869)
...+.||+|+.+.+|..-. -+..+-|+++........+ .++.|.+. .||-+-.-+.+ .... -+......
T Consensus 14 ~~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaW-Pqa~L~G~~~~~~iG 86 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAW-PQATLHGGRRGKVIG 86 (637)
T ss_pred CCCccccCCccceeeecch---hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcc-cHHHhhCCCccceeE
Confidence 3567899999999996432 2334568886544432222 23344444 56644331221 1100 11223366
Q ss_pred EEeecccCCC-HHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 633 IVYDFMQNGS-LEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gs-L~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
+.|+.+++.- ...+..............|...+.+++.+|.+.+.||+. |.+-||+.++|+||.+++.+.|.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccc
Confidence 7888876642 233333222222334578999999999999999999999 999999999999999999999998654
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcC-CCCCCcCccCCc---h
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSR-RRPTDSMFHEGL---T 782 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg-~~pf~~~~~~~~---~ 782 (869)
-.....+ ......+|...|.+||.-. +...+...|-|.+||++++++.| ++||.+...... .
T Consensus 164 fqi~~ng---------~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p 234 (637)
T COG4248 164 FQINANG---------TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNP 234 (637)
T ss_pred eeeccCC---------ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCc
Confidence 4332221 2233457899999999644 34567789999999999999886 999987533211 0
Q ss_pred HH-HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCC--CCCCCCHHHHHHHHHHHHH
Q 002897 783 LH-EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMES--PTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 783 ~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L~~~~~ 859 (869)
.+ .+.... +...-| .....+.....+..+-.++.+..+..+|+... |.-|||++-.+..|..+.+
T Consensus 235 ~E~~Ia~g~----f~ya~~--------~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 235 LETDIAHGR----FAYASD--------QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred chhhhhcce----eeechh--------ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 11 111111 000000 11111122223344455677888999998764 5689999999999998887
Q ss_pred hhhc
Q 002897 860 AFVS 863 (869)
Q Consensus 860 ~~~~ 863 (869)
....
T Consensus 303 ~L~~ 306 (637)
T COG4248 303 QLKK 306 (637)
T ss_pred hhhh
Confidence 7643
No 477
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.21 E-value=3.2e-12 Score=124.22 Aligned_cols=134 Identities=28% Similarity=0.308 Sum_probs=91.0
Q ss_pred CccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcE
Q 002897 316 NCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEY 395 (869)
Q Consensus 316 ~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 395 (869)
.+..|+++|||+|.|+ .+.++ ..+.+.++.|++|+|.|+. + +.+..+.+|+.||||+|.++ .+.++-..+.+.+.
T Consensus 282 TWq~LtelDLS~N~I~-~iDES-vKL~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDES-VKLAPKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred hHhhhhhccccccchh-hhhhh-hhhccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 3445555555555554 22221 2233334455555555542 2 34777888999999999988 56666677888899
Q ss_pred EEeeCccccCCCCccccccccccEEEccCCcccCCC-ccccccccccCeeccccccCcccCC
Q 002897 396 VKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQI-PKYLENLSFLEYLNLSYNHFEGEVP 456 (869)
Q Consensus 396 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~ 456 (869)
|.|+.|.|.. -..++.+-+|..||+++|+|.... -..+++++.|+.+.|.+|++.+.+.
T Consensus 357 L~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 357 LKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 9999998852 245677778889999999887321 2568888999999999999887654
No 478
>PLN03150 hypothetical protein; Provisional
Probab=99.17 E-value=2.6e-11 Score=140.44 Aligned_cols=113 Identities=36% Similarity=0.553 Sum_probs=104.4
Q ss_pred cceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccC
Q 002897 345 SLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSS 424 (869)
Q Consensus 345 l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 424 (869)
+..|+|++|.++|.+|..++.+++|+.|+|++|.+++.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCccccccc-cccCeeccccccCcccCCC
Q 002897 425 NKLSGQIPKYLENL-SFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 425 N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~~~ 457 (869)
|+++|.+|..+..+ .++..+++++|...+..|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 99999999998764 4678899999987665443
No 479
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=3.2e-11 Score=130.43 Aligned_cols=250 Identities=18% Similarity=0.140 Sum_probs=174.5
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEEC-CCCeEEEEEEeecccchhh--HHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIG-ENGMLVAVKVLNLMQKGAL--KSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
....+|..+..||.|.|+.|+.+... .++..|++|.......... ..-..|+.+...+ .|.+++++...|...
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~--- 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL--- 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---
Confidence 34567889999999999999998866 6788999998754332222 2235666666666 588888877665443
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAH 705 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~k 705 (869)
...++--|||++++......-.. .+++..++.+..|++.++.++|+. .++|+|+||+||++..+ +..+
T Consensus 339 --r~~~ip~e~~~~~s~~l~~~~~~------~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 339 --RQGYIPLEFCEGGSSSLRSVTSQ------MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred --ccccCchhhhcCcchhhhhHHHH------hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhh
Confidence 55678899999999877663322 267788899999999999999999 99999999999999886 7889
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCccccc--CCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYI--APEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
++|||.+..+.... ....+..+++ +|+......+..++|+||||.-+.+..+|.+--... .. .
T Consensus 408 ~~~~~~~t~~~~~~-----------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~---~ 472 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSS-----------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQ---S 472 (524)
T ss_pred ccccccccccceec-----------ccccccccccccchhhccccccccccccccccccccccccCcccCccc-cc---c
Confidence 99999986432211 1112233344 566666677889999999999999999987653211 00 0
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
...... ..+........+..+...+...++..||.+.+......-.
T Consensus 473 ~~i~~~----------------------------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 473 LTIRSG----------------------------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred eeeecc----------------------------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 000000 0000111224566778889999999999998876554433
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=1.1e-11 Score=120.65 Aligned_cols=125 Identities=27% Similarity=0.305 Sum_probs=107.2
Q ss_pred ccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEcc
Q 002897 344 LSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLS 423 (869)
Q Consensus 344 ~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 423 (869)
-++.+|||+|.|+ .+.+++.-++.++.|++|+|.+. .+. .++.+.+|+.|+||+|.++ .+-.+-..+-+++.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 3567999999998 77888889999999999999998 443 4899999999999999998 667777788999999999
Q ss_pred CCcccCCCccccccccccCeeccccccCcc--cCCCCCccCCCccccccCCcc
Q 002897 424 SNKLSGQIPKYLENLSFLEYLNLSYNHFEG--EVPKKGVFSNKTRFSLSGNGK 474 (869)
Q Consensus 424 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~~~~~~~~~~~~~~~~n~~ 474 (869)
.|.|.. + ..+.++-+|..||+++|+|.. .+...|.++.+..+.+.+||-
T Consensus 361 ~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 361 QNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred hhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 999973 2 467888999999999999974 344568889999999999975
No 481
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.07 E-value=3e-11 Score=142.42 Aligned_cols=271 Identities=20% Similarity=0.179 Sum_probs=130.5
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCc--cCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNR--LGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~--i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
...++..+-+|.+. .++.+..+ ++|+.|-+.+|. +..+.++.|..++.|++|||++|.=-+.+|..+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 45566666666665 33333322 356666666664 443444446666666666666665555666666666666666
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCc--cccccCcCccCCCCCCEEEccCc
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQ--FIGKMSINFNSLKNLSVLILGNN 177 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~--i~~~~~~~~~~l~~L~~L~l~~n 177 (869)
+|++..++ .+|.+ +.+|+.|.+|++..+.-...+|..+..+++|++|.+..-. ........+..+.+|+.+.....
T Consensus 601 ~L~~t~I~-~LP~~-l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSG-LGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred cccCCCcc-ccchH-HHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecc
Confidence 66666665 66643 5666666666666665544455555666666666665443 11111222333333333333222
Q ss_pred cCCCCCCCCcchhhhccCCCCCc----EEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccC------CCC
Q 002897 178 HLGNRAANDLDFVTVLANCSKLE----NLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGN------LVH 247 (869)
Q Consensus 178 ~l~~~~~~~~~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~------l~~ 247 (869)
.. .+. ..+..+++|. .+.+.++... ..+..+..+.. |+.|.+.++.+.......+.. +++
T Consensus 679 s~-~~~-------e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~-L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~ 748 (889)
T KOG4658|consen 679 SV-LLL-------EDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGN-LEELSILDCGISEIVIEWEESLIVLLCFPN 748 (889)
T ss_pred hh-HhH-------hhhhhhHHHHHHhHhhhhcccccc-eeecccccccC-cceEEEEcCCCchhhcccccccchhhhHHH
Confidence 11 000 0111222222 2222222222 22333344433 555555555554222222111 222
Q ss_pred CCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceeccccccc
Q 002897 248 LNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQ 307 (869)
Q Consensus 248 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 307 (869)
+..+...++... ..+.+.--.++|+.|++..+.....+.+....+..+..+.+..+.+.
T Consensus 749 l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 749 LSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred HHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccc
Confidence 333333333222 22333334577777777777666555555555555555445555544
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=2.2e-09 Score=99.03 Aligned_cols=129 Identities=23% Similarity=0.312 Sum_probs=95.5
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecc--------cchhhHHHHHHHHHHHhCCC--CccceEEEEeeccccCCCc
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--------QKGALKSFLTECEALRSIRH--RNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 629 (869)
..+++|+-+.+|.+.+ -|..+++|.=... .+-...+..+|+.++.++.- -++..++++. .+
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-------~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-------PD 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-------CC
Confidence 4678999999999977 5666777753111 01123566889999998853 3344445542 25
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
...|+|||++|..|.+++.... ..++..+-.-+.-||.. ||||+|+.++||++..+. +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~~-------------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEAR-------------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhcc-------------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 5689999999999998887642 34566677778889999 999999999999997665 999999
Q ss_pred ccccc
Q 002897 710 GLAKF 714 (869)
Q Consensus 710 g~a~~ 714 (869)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99863
No 483
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.04 E-value=6.8e-11 Score=134.19 Aligned_cols=215 Identities=22% Similarity=0.285 Sum_probs=153.1
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
...+.+.+.+-+-+|+++.++.+.-...|...+.|+..... ....+....+-.+.-...+|-++....- +..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCC
Confidence 45567888889999999999999887778666666553211 1112222222222222334544433322 233
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++|++|+.++++..-++.... .+.+-.+.....+..+.+|||.. .+.|+|++|.|.++..+++.++.
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccC
Confidence 4668899999999999999987663 55556667777888999999998 79999999999999999999999
Q ss_pred cccccccCCCCCCCC---------------------ccc--cCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHH
Q 002897 708 DFGLAKFLPARPLDT---------------------VVE--TPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLL 764 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~---------------------~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~ 764 (869)
|||............ ... .........||+.|.+||...+......+|.|+.|++++
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhh
Confidence 998544332110000 000 001234567999999999999999999999999999999
Q ss_pred HHHcCCCCCCcCccC
Q 002897 765 EMFSRRRPTDSMFHE 779 (869)
Q Consensus 765 el~tg~~pf~~~~~~ 779 (869)
|.++|.+||.....+
T Consensus 1027 e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETPQ 1041 (1205)
T ss_pred hhhcCCCCCCCcchh
Confidence 999999999865443
No 484
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.02 E-value=2.7e-09 Score=97.63 Aligned_cols=142 Identities=23% Similarity=0.263 Sum_probs=103.1
Q ss_pred CCCeeeeecceEEEEEEECCCCeEEEEEEee-c-------ccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 558 SSNMVGQGSFGTVFKGIIGENGMLVAVKVLN-L-------MQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~-~-------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
....+-+|+-+.|+++.+ .|+.++||.=. + ..+-..++..+|++.+.++.--.|.-..-++.+. .
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~-----~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT-----Y 83 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec-----C
Confidence 567899999999999999 78888887531 1 1112346678999999988543433322232221 4
Q ss_pred eEEEEeecccC-CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEE
Q 002897 630 FKAIVYDFMQN-GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---VAH 705 (869)
Q Consensus 630 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 705 (869)
.-.|+|||+++ .++.+++...-.. ....+....++.+|-+.+.-||.. +|+|||+..+||++..++ .+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~----~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMED----ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccC----cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 45799999977 4788888765432 123333378899999999999999 999999999999997665 468
Q ss_pred Eccccccc
Q 002897 706 VGDFGLAK 713 (869)
Q Consensus 706 l~Dfg~a~ 713 (869)
++|||++.
T Consensus 157 lIdfgls~ 164 (229)
T KOG3087|consen 157 LIDFGLSS 164 (229)
T ss_pred EEeecchh
Confidence 99999985
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.02 E-value=7.1e-09 Score=109.43 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=136.1
Q ss_pred cceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecccC-CCHH
Q 002897 566 SFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQN-GSLE 644 (869)
Q Consensus 566 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 644 (869)
...+.|+|....+|..|++|+++............-+++++++.|+|+|++.+++....| ++...++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 346889999999999999999954333322334556889999999999999998875434 34778999999987 6777
Q ss_pred HHHhhCCCcc---------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 645 EWLHQNNDKL---------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 645 ~~l~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
++--...... +....+++.+|.++.|+..||.++|+. |..-+-+.|.+|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7644332221 233478899999999999999999999 9999999999999999999999988887665
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCC
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRP 772 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~p 772 (869)
..++. |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 444 ~~d~~----------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT----------------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC----------------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 54321 11111 1246888999999999999654
No 486
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.01 E-value=2e-09 Score=109.23 Aligned_cols=144 Identities=21% Similarity=0.259 Sum_probs=109.3
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCC--CccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRH--RNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.++.|.++.||+++.. +|+.+++|....... .....+..|+++++.+.+ ..+.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 57899999999999985 468999999754332 134678999999999965 34677777754321 1135689999
Q ss_pred cccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 002897 637 FMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC---------------------------------- 682 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------- 682 (869)
|++|.++.+.+... .++..+...++.++++++++||+..
T Consensus 81 ~i~G~~l~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLRP-------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99998887765321 2677788888888888888888531
Q ss_pred -------------------CCCeEecCCCCCceeecC--CCcEEEccccccc
Q 002897 683 -------------------KPPVVHGDLKPSNVLLDH--DMVAHVGDFGLAK 713 (869)
Q Consensus 683 -------------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~ 713 (869)
...++|+|++|.||+++. ++.+.|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 246799999999999998 6678999999885
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.01 E-value=2.6e-09 Score=102.74 Aligned_cols=126 Identities=23% Similarity=0.262 Sum_probs=84.2
Q ss_pred EEEEEEECCCCeEEEEEEeeccc--------------c------------hhhHHHHHHHHHHHhCCCC--ccceEEEEe
Q 002897 569 TVFKGIIGENGMLVAVKVLNLMQ--------------K------------GALKSFLTECEALRSIRHR--NLIKIITIC 620 (869)
Q Consensus 569 ~V~~~~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~E~~~l~~l~h~--niv~~~~~~ 620 (869)
.||.|... +|..+|||+.+... . .......+|++.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 48999985 89999999985211 0 0124568899999999654 56777766
Q ss_pred eccccCCCceEEEEeeccc--CCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecCCCCCcee
Q 002897 621 SSIDFNGVDFKAIVYDFMQ--NGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYL-HHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 621 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlkp~NIl 697 (869)
...++||||++ |..+..+.... ++......++.+++..+..+ |.. |++|||+.+.||+
T Consensus 79 --------~~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 79 --------NRNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp --------ETTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred --------eCCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 34579999998 55554433322 12334566778888866664 677 9999999999999
Q ss_pred ecCCCcEEEccccccccCC
Q 002897 698 LDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~ 716 (869)
++++ .+.++|||.|....
T Consensus 140 v~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp EETT-CEEE--GTTEEETT
T ss_pred eecc-eEEEEecCcceecC
Confidence 9887 99999999987543
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=4.4e-10 Score=132.72 Aligned_cols=132 Identities=20% Similarity=0.244 Sum_probs=111.5
Q ss_pred ccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc--cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcc
Q 002897 43 GNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ--FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPN 120 (869)
Q Consensus 43 ~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~--i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 120 (869)
.+....+...+-+|.+. .++..... ++|++|-+..|. +..+.+..|..++.|+.|||++|.--+.+|. .++.|-+
T Consensus 520 ~~~~~~rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~-~I~~Li~ 596 (889)
T KOG4658|consen 520 KSWNSVRRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPS-SIGELVH 596 (889)
T ss_pred cchhheeEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCCh-HHhhhhh
Confidence 44478899999999998 55555443 489999999996 6656666788999999999999876568984 5899999
Q ss_pred hhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc
Q 002897 121 LRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 121 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 178 (869)
||.|++++..+. .+|.++.++++|.+||+..+.-....+.....|.+|++|.+-.-.
T Consensus 597 LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 597 LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 999999999999 689999999999999999998766667788889999999987765
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.96 E-value=4.3e-10 Score=87.10 Aligned_cols=59 Identities=37% Similarity=0.590 Sum_probs=31.5
Q ss_pred CcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 23 KLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|++|++++|+|+.+.+.+|.++++|++|++++|+|+.+.|++|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 45555555555554444455555555555555555555545555555555555555554
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.95 E-value=4.6e-09 Score=102.94 Aligned_cols=137 Identities=23% Similarity=0.210 Sum_probs=102.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc----------------------chhhHHHHHHHHHHHhCCCC-
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ----------------------KGALKSFLTECEALRSIRHR- 611 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~E~~~l~~l~h~- 611 (869)
=+.+...||.|--|.||.|.+. .|.++|||.-+... .-.....++|.++|.++...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G 170 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG 170 (304)
T ss_pred HHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence 3556789999999999999996 89999999753111 01124568999999999644
Q ss_pred -ccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 002897 612 -NLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGD 690 (869)
Q Consensus 612 -niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 690 (869)
.+.+.+++ +..++||||++|-.|...- ++.+..-.++..|++-+.-+-.. ||||||
T Consensus 171 ~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~---GiVHGD 227 (304)
T COG0478 171 VKVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR---GIVHGD 227 (304)
T ss_pred CCCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc---CccccC
Confidence 78888776 6778999999886554332 22334445555566655555566 999999
Q ss_pred CCCCceeecCCCcEEEccccccccC
Q 002897 691 LKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 691 lkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
+++-||+++++|.+.++||-.+...
T Consensus 228 lSefNIlV~~dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 228 LSEFNILVTEDGDIVVIDWPQAVPI 252 (304)
T ss_pred CchheEEEecCCCEEEEeCcccccC
Confidence 9999999999999999999877543
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=5e-10 Score=86.74 Aligned_cols=61 Identities=23% Similarity=0.481 Sum_probs=51.8
Q ss_pred cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcC
Q 002897 46 SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRF 106 (869)
Q Consensus 46 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l 106 (869)
++|++|++++|+|+.+.+++|.++++|++|+|++|+|+.+.|.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4788888888888877778888888888888888888888788888888888888888875
No 492
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.90 E-value=3.8e-08 Score=100.75 Aligned_cols=145 Identities=14% Similarity=0.039 Sum_probs=101.4
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccch-hh----------HHHHHHHHHHHhCC--CCccceEEEEeeccccC
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-AL----------KSFLTECEALRSIR--HRNLIKIITICSSIDFN 626 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~ 626 (869)
+.+-......|+++.. .|+.|.||........ .. ..+.+|...+.++. .-.++.++++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4444444455667766 7889999977432211 11 14778999888883 22334455554322111
Q ss_pred CCceEEEEeecccCC-CHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-----
Q 002897 627 GVDFKAIVYDFMQNG-SLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH----- 700 (869)
Q Consensus 627 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 700 (869)
.....++|||++++. +|.+++..... .+.+......++.+++..++-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 134578999999886 89999864221 1256677889999999999999999 9999999999999975
Q ss_pred --CCcEEEccccccc
Q 002897 701 --DMVAHVGDFGLAK 713 (869)
Q Consensus 701 --~~~~kl~Dfg~a~ 713 (869)
++.+.++||+.+.
T Consensus 179 ~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 179 EEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCCceEEEEECCccc
Confidence 4689999999885
No 493
>PRK09902 hypothetical protein; Provisional
Probab=98.71 E-value=2.6e-07 Score=89.07 Aligned_cols=143 Identities=16% Similarity=0.105 Sum_probs=105.9
Q ss_pred eeeecceEEEEEEECCCCeEEEEEEeeccc------chhhHHHHHHHHHHHhCC--CCccceEEEEeeccccCCCceEEE
Q 002897 562 VGQGSFGTVFKGIIGENGMLVAVKVLNLMQ------KGALKSFLTECEALRSIR--HRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 562 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
-|+||.+.|+.... .|..+-+|.-...- +-....|.+|...+..+. .-.+.+++ ++...........+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 36789999999887 55678888764110 223478899999998884 22355555 332222233456789
Q ss_pred EeecccC-CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--EEEcccc
Q 002897 634 VYDFMQN-GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV--AHVGDFG 710 (869)
Q Consensus 634 v~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg 710 (869)
|+|-+++ .+|.+++..... .+.+......+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 9997764 589998866432 1367788889999999999999999 9999999999999986676 9999998
Q ss_pred cccc
Q 002897 711 LAKF 714 (869)
Q Consensus 711 ~a~~ 714 (869)
-++.
T Consensus 176 k~r~ 179 (216)
T PRK09902 176 KSRR 179 (216)
T ss_pred ccch
Confidence 7753
No 494
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.67 E-value=1.2e-08 Score=111.95 Aligned_cols=158 Identities=17% Similarity=0.236 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccC-CCCCCccCcccccCCcccC
Q 002897 668 AIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETP-SSSSGIKGTVGYIAPEYGT 746 (869)
Q Consensus 668 ~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~ 746 (869)
+.+++.|+.|+|... ++||++|.|++|.+++.+..||+.|+++............... ....-..-...|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345569999999885 9999999999999999999999999998766543221111110 1111223456899999999
Q ss_pred CCCCCccccchhhhHHHHHHH-cCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHH
Q 002897 747 GSEASMTGDVYSFGILLLEMF-SRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEEC 825 (869)
Q Consensus 747 ~~~~~~~sDvwslG~il~el~-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (869)
+...+.++|+||+||.+|.+. .|+.-+..... ........... +. ...-.....
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~--~~~~~~~~~~~--------~~---------------~~~~~s~~~ 237 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG--LLSYSFSRNLL--------NA---------------GAFGYSNNL 237 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCC--cchhhhhhccc--------cc---------------ccccccccC
Confidence 988899999999999999999 45555543211 11111111100 00 000011245
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 826 LVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 826 ~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+.++.+=+.+++..++..||++.++..
T Consensus 238 p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 238 PSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred cHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 566777788899999999997777654
No 495
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.65 E-value=2.9e-07 Score=89.65 Aligned_cols=155 Identities=21% Similarity=0.242 Sum_probs=108.1
Q ss_pred CcccHHHHHHHhcCCCCCCeee---eecceEEEEEEECCCCeEEEEEEeecccch------------------------h
Q 002897 542 PMISYAKLSKATSEFSSSNMVG---QGSFGTVFKGIIGENGMLVAVKVLNLMQKG------------------------A 594 (869)
Q Consensus 542 ~~~~~~~~~~~~~~y~~~~~lg---~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------~ 594 (869)
-..++..+....++..+....| .|--+.||+|... ++..+|||+++..... .
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 3445566666666666666555 5666789999874 7999999998632210 0
Q ss_pred hHHHHHHHHHHHhC--CCCccceEEEEeeccccCCCceEEEEeecccCC-CHHHHHhhCCCcccccCCCHHHHHHHHHHH
Q 002897 595 LKSFLTECEALRSI--RHRNLIKIITICSSIDFNGVDFKAIVYDFMQNG-SLEEWLHQNNDKLEVCNLSLIQTLNIAIDV 671 (869)
Q Consensus 595 ~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i 671 (869)
..-..+|+.-|+++ .+-.+.+.+++ ..-.+||||+... .-.-.++. .++..++...+..++
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~---------~~nVLvMEfIg~~g~pAP~LkD-------v~~e~~e~~~~~~~~ 175 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAF---------RNNVLVMEFIGDDGLPAPRLKD-------VPLELEEAEGLYEDV 175 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceee---------cCCeEEEEeccCCCCCCCCccc-------CCcCchhHHHHHHHH
Confidence 11246777778877 35666677776 3457999998653 11111221 124444677888899
Q ss_pred HHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCC
Q 002897 672 ASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 672 ~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 716 (869)
++.+.-|-..+ ++||+|++.-|||+. ++.+.|+|||.|....
T Consensus 176 v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 176 VEYMRRLYKEA--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred HHHHHHHHHhc--CcccccchhhheEEE-CCeEEEEECccccccC
Confidence 99999998843 999999999999998 8899999999997654
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.63 E-value=1.2e-09 Score=118.80 Aligned_cols=198 Identities=24% Similarity=0.239 Sum_probs=113.3
Q ss_pred CCCCEEEccCccccCcC-CCCCCCCccccceecccccccccCCcCccCcc-ccceeeccCcccCC---CCCccccc----
Q 002897 270 KNLQSLYLNSNFLHGYI-PSSLGNLTMLTLLALEINNLQGKIPSSLGNCT-SLIMLTLSKNKLDG---VLPPQILS---- 340 (869)
Q Consensus 270 ~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~---~~~~~~~~---- 340 (869)
++++.|.+-.-.=.+.. |-.+....+|+.|.+.++.|.. ...+..+. .|+.| +.+|.++. ++....+.
T Consensus 84 qkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns 160 (1096)
T KOG1859|consen 84 QKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNS 160 (1096)
T ss_pred hhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccc
Confidence 44444544433322222 6677888999999999999873 22222221 23332 12222210 00000000
Q ss_pred -cccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCc-ccccccccc
Q 002897 341 -VTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPP-SLNFLKSIK 418 (869)
Q Consensus 341 -~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~ 418 (869)
....+...+.+.|.++ ....++.-++.|+.|+|++|+++... .+..|+.|+.|||++|.|+ .+|. ...++ .|+
T Consensus 161 ~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~ 235 (1096)
T KOG1859|consen 161 PVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQ 235 (1096)
T ss_pred hhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hhe
Confidence 0112334566777776 55566777777777777777776332 6677777777777777777 4443 22333 377
Q ss_pred EEEccCCcccCCCccccccccccCeeccccccCcccC--CCCCccCCCccccccCCcccCC
Q 002897 419 VLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEV--PKKGVFSNKTRFSLSGNGKLCG 477 (869)
Q Consensus 419 ~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~--~~~~~~~~~~~~~~~~n~~~c~ 477 (869)
.|.|+||.++.. ..+.+|.+|+.||+++|-|++-. ...+.+..+..+.+.|||--|.
T Consensus 236 ~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 236 LLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred eeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 777777777632 35667777777777777776532 2234556666777777776664
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=6.7e-09 Score=101.55 Aligned_cols=109 Identities=20% Similarity=0.297 Sum_probs=61.1
Q ss_pred CcCEEeccCCcCcccc-Cccc-ccCcCCCEEEccCCccCc--cCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcE
Q 002897 23 KLENLSLAENHLTGQL-PVSI-GNLSALQVIDIRGNRLGG--KIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEF 98 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~-~~~~-~~l~~L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 98 (869)
-++.|.+.++.|...= -..| ...+.++.|||.+|.|+. .+-..+.+++.|++|+|+.|++...+...-..+.+|+.
T Consensus 46 a~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~ 125 (418)
T KOG2982|consen 46 ALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRV 125 (418)
T ss_pred chhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEE
Confidence 3445556666554211 1122 234667777777777773 22233556777777777777776433222245567777
Q ss_pred EECcCCcCcccCCchhhcCCcchhhhhcccccc
Q 002897 99 IFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNL 131 (869)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i 131 (869)
|-|.+..+.-.-....+..+|.++.|.++.|++
T Consensus 126 lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~ 158 (418)
T KOG2982|consen 126 LVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL 158 (418)
T ss_pred EEEcCCCCChhhhhhhhhcchhhhhhhhccchh
Confidence 777776654222233455666667776666644
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=2.6e-09 Score=104.38 Aligned_cols=216 Identities=19% Similarity=0.237 Sum_probs=125.4
Q ss_pred cccCcCCCEEEccCCccCccCC-cccc-CCCCCCEEeCcCcccCc--cCCcccccCCCCcEEECcCCcCcccCCchhhcC
Q 002897 42 IGNLSALQVIDIRGNRLGGKIP-DTLG-QLRKLIYLNIGRNQFSG--FIPPSIYNISSFEFIFLQSNRFHGSLPFDMVAN 117 (869)
Q Consensus 42 ~~~l~~L~~L~L~~n~i~~~~p-~~~~-~l~~L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 117 (869)
+.....++.|-+.++.|..+-. ..|+ ..+.++.|||.+|+|+. .+..-+.+++.|+.|+|++|.+...|... -..
T Consensus 41 v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~l-p~p 119 (418)
T KOG2982|consen 41 VSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSL-PLP 119 (418)
T ss_pred eccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccC-ccc
Confidence 3344455667777777763211 1232 46788888999998883 33445667888888888888886333211 134
Q ss_pred Ccchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCC
Q 002897 118 LPNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANC 196 (869)
Q Consensus 118 l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 196 (869)
+.+|+.|.|.+..+... ....+..++.++.|+++.|.+ +.+++..|-++..... ...+..+
T Consensus 120 ~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~--------------rq~n~Dd~c~e~~s~~----v~tlh~~ 181 (418)
T KOG2982|consen 120 LKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL--------------RQLNLDDNCIEDWSTE----VLTLHQL 181 (418)
T ss_pred ccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchh--------------hhhccccccccccchh----hhhhhcC
Confidence 56777777777777532 234556667777777777642 3334444444433321 1233444
Q ss_pred CCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccC-CccccCCCCCCeeecccCcceecC-CccccCCCCCCE
Q 002897 197 SKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTI-PPGLGNLVHLNSIAMEGNQLIGTV-PPEIGWLKNLQS 274 (869)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~ 274 (869)
+.+..++++-|++...+| ++..+-+..|.++... ...+..++.+..|+|+.|+|.+-. -+++..+++|+.
T Consensus 182 ~c~~~~w~~~~~l~r~Fp--------nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~d 253 (418)
T KOG2982|consen 182 PCLEQLWLNKNKLSRIFP--------NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVD 253 (418)
T ss_pred CcHHHHHHHHHhHHhhcc--------cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhhe
Confidence 455555556666654444 2555666666665322 334555666667777777765321 234566777777
Q ss_pred EEccCccccC
Q 002897 275 LYLNSNFLHG 284 (869)
Q Consensus 275 L~L~~N~l~~ 284 (869)
|.+++|.+..
T Consensus 254 lRv~~~Pl~d 263 (418)
T KOG2982|consen 254 LRVSENPLSD 263 (418)
T ss_pred eeccCCcccc
Confidence 7777776653
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.61 E-value=4.7e-07 Score=89.91 Aligned_cols=110 Identities=23% Similarity=0.234 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHhCC--CCccceEEEEeeccccCCCceEEEEeecccC-CCHHHHHhhCCCcccccCCCHHHHHHHHHHH
Q 002897 595 LKSFLTECEALRSIR--HRNLIKIITICSSIDFNGVDFKAIVYDFMQN-GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDV 671 (869)
Q Consensus 595 ~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i 671 (869)
..+..+|...+..+. .-.+.+.+++...... .....++|+|++++ .+|.+++..... .+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~-~~~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKG-GGYRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC-CceeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHHHH
Confidence 356788888887773 3345566666544322 22456899999988 479999886432 4566788999999
Q ss_pred HHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEEcccccccc
Q 002897 672 ASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---VAHVGDFGLAKF 714 (869)
Q Consensus 672 ~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 714 (869)
++.++-||+. ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999 999999999999999887 899999998764
No 500
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.60 E-value=8.1e-10 Score=120.08 Aligned_cols=175 Identities=25% Similarity=0.286 Sum_probs=86.3
Q ss_pred cCCcCEEeccCCcCcccc-CcccccCcCCCEEEccCCccCccCCccccCC-CCCCEEeCcCcccCc---cCCc---cccc
Q 002897 21 LFKLENLSLAENHLTGQL-PVSIGNLSALQVIDIRGNRLGGKIPDTLGQL-RKLIYLNIGRNQFSG---FIPP---SIYN 92 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l-~~L~~L~L~~n~i~~---~~p~---~~~~ 92 (869)
+++++.|.+-.-.=.+-. |-++..+..|++|.|.++.|.. .-+ +..+ ..|++| +-+|.+.. ++.. .|++
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~-~~G-L~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~n 159 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST-AKG-LQELRHQLEKL-ICHNSLDALRHVFASCGGDISN 159 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh-hhh-hHHHHHhhhhh-hhhccHHHHHHHHHHhcccccc
Confidence 444555544433322222 5566677778888888777763 111 1111 133333 22222220 0000 0111
Q ss_pred ---CCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCC
Q 002897 93 ---ISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNL 169 (869)
Q Consensus 93 ---l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 169 (869)
...|...+.++|++. .+. ..+.-++.|+.|+|++|+++.. ..+..+++|++|||++|.+..+.--...++. |
T Consensus 160 s~~Wn~L~~a~fsyN~L~-~mD-~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L 234 (1096)
T KOG1859|consen 160 SPVWNKLATASFSYNRLV-LMD-ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-L 234 (1096)
T ss_pred chhhhhHhhhhcchhhHH-hHH-HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-h
Confidence 113455556666664 333 3355556666666666666543 2555666666666666666554444444444 6
Q ss_pred CEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 170 SVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 170 ~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
+.|++.+|.++.+- .+.++.+|+.||+++|-|.+
T Consensus 235 ~~L~lrnN~l~tL~--------gie~LksL~~LDlsyNll~~ 268 (1096)
T KOG1859|consen 235 QLLNLRNNALTTLR--------GIENLKSLYGLDLSYNLLSE 268 (1096)
T ss_pred eeeeecccHHHhhh--------hHHhhhhhhccchhHhhhhc
Confidence 66666666655433 24555666666666665543
Done!