Query 002897
Match_columns 869
No_of_seqs 937 out of 5811
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 05:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 9.7E-62 3.3E-66 583.5 30.7 479 2-493 205-754 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.3E-57 8E-62 545.4 28.8 460 2-474 156-716 (768)
3 3t6q_A CD180 antigen; protein- 100.0 5.8E-56 2E-60 521.9 31.1 466 2-478 38-563 (606)
4 3vq2_A TLR4, TOLL-like recepto 100.0 9.2E-54 3.2E-58 503.2 29.3 464 2-479 16-562 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 8.1E-53 2.8E-57 501.9 34.1 468 2-479 30-626 (680)
6 3j0a_A TOLL-like receptor 5; m 100.0 4.2E-53 1.4E-57 513.7 31.8 463 2-479 9-564 (844)
7 3t6q_A CD180 antigen; protein- 100.0 3.2E-52 1.1E-56 490.1 32.7 446 1-458 61-566 (606)
8 1ziw_A TOLL-like receptor 3; i 100.0 1.9E-51 6.5E-56 490.1 35.5 469 2-475 9-573 (680)
9 3omv_A RAF proto-oncogene seri 100.0 1E-52 3.5E-57 439.5 19.8 264 553-862 35-303 (307)
10 4asz_A BDNF/NT-3 growth factor 100.0 5.4E-53 1.9E-57 442.2 16.1 269 554-864 13-294 (299)
11 4aoj_A High affinity nerve gro 100.0 3.9E-52 1.4E-56 442.0 21.3 266 554-861 41-321 (329)
12 4fih_A Serine/threonine-protei 100.0 7.5E-52 2.6E-56 438.1 20.8 250 554-852 74-323 (346)
13 3vq2_A TLR4, TOLL-like recepto 100.0 5.1E-51 1.7E-55 479.8 29.7 439 1-458 36-564 (606)
14 4g3f_A NF-kappa-beta-inducing 100.0 1.5E-51 5.2E-56 434.6 22.1 262 553-862 57-319 (336)
15 2z63_A TOLL-like receptor 4, v 100.0 6.8E-51 2.3E-55 475.5 28.6 456 2-479 12-535 (570)
16 4b9d_A Serine/threonine-protei 100.0 3.7E-52 1.3E-56 441.2 15.2 251 554-852 24-276 (350)
17 4gt4_A Tyrosine-protein kinase 100.0 1.2E-51 4E-56 434.1 17.7 262 554-857 26-304 (308)
18 3fpq_A Serine/threonine-protei 100.0 4.3E-51 1.5E-55 424.2 21.8 251 557-852 29-282 (290)
19 3j0a_A TOLL-like receptor 5; m 100.0 4.3E-50 1.5E-54 487.3 32.3 440 25-477 7-541 (844)
20 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-51 6.1E-56 428.5 14.2 250 554-852 32-284 (311)
21 4fie_A Serine/threonine-protei 100.0 1.2E-50 4E-55 439.6 21.2 250 554-852 151-400 (423)
22 3hmm_A TGF-beta receptor type- 100.0 3.4E-50 1.2E-54 424.7 22.0 275 554-860 3-298 (303)
23 2z63_A TOLL-like receptor 4, v 100.0 3.3E-50 1.1E-54 469.7 24.1 447 1-459 32-538 (570)
24 3hyh_A Carbon catabolite-derep 100.0 2.3E-50 7.9E-55 414.8 17.7 247 553-852 12-262 (275)
25 4ase_A Vascular endothelial gr 100.0 1.9E-50 6.5E-55 432.3 14.6 275 547-861 57-349 (353)
26 2z81_A CD282 antigen, TOLL-lik 100.0 7.6E-50 2.6E-54 464.1 20.1 456 2-478 10-513 (549)
27 4eco_A Uncharacterized protein 100.0 2.2E-50 7.6E-55 473.4 13.4 416 22-454 81-602 (636)
28 3ubd_A Ribosomal protein S6 ki 100.0 4.3E-50 1.5E-54 418.6 10.0 248 554-852 24-281 (304)
29 4g31_A Eukaryotic translation 100.0 6.4E-49 2.2E-53 412.3 18.5 263 554-852 5-279 (299)
30 2z7x_B TOLL-like receptor 1, v 100.0 9.5E-49 3.2E-53 451.4 16.4 452 1-478 4-484 (520)
31 4eco_A Uncharacterized protein 100.0 1.8E-48 6E-53 457.3 17.0 419 46-478 81-603 (636)
32 4ecn_A Leucine-rich repeat pro 100.0 7.1E-48 2.4E-52 458.1 21.8 442 16-475 316-864 (876)
33 2z81_A CD282 antigen, TOLL-lik 100.0 5.3E-48 1.8E-52 448.6 19.6 440 1-457 30-515 (549)
34 4g8a_A TOLL-like receptor 4; l 100.0 1.3E-46 4.5E-51 445.6 29.1 468 2-478 36-583 (635)
35 4b99_A Mitogen-activated prote 100.0 2.9E-47 9.9E-52 415.2 19.8 284 554-852 54-344 (398)
36 4ecn_A Leucine-rich repeat pro 100.0 9.9E-47 3.4E-51 448.3 25.6 432 2-453 328-865 (876)
37 2z7x_B TOLL-like receptor 1, v 100.0 5.3E-46 1.8E-50 428.5 19.9 439 1-457 25-486 (520)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.3E-45 4.4E-50 428.7 20.0 431 1-456 35-514 (562)
39 4f9c_A Cell division cycle 7-r 100.0 1.6E-45 5.4E-50 397.5 18.3 207 551-776 18-250 (361)
40 4g8a_A TOLL-like receptor 4; l 100.0 2.1E-44 7.2E-49 426.7 29.0 447 1-457 56-585 (635)
41 3v5w_A G-protein coupled recep 100.0 1.6E-44 5.5E-49 408.4 22.1 250 553-852 188-449 (689)
42 3uto_A Twitchin; kinase, muscl 100.0 1.4E-44 4.8E-49 414.2 18.8 253 553-852 156-410 (573)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7E-44 2.4E-48 414.1 21.9 434 20-478 29-513 (562)
44 3v47_A TOLL-like receptor 5B a 100.0 5.7E-43 1.9E-47 396.3 26.0 388 2-457 15-413 (455)
45 3fxz_A Serine/threonine-protei 100.0 8.2E-43 2.8E-47 370.1 23.8 251 553-852 19-269 (297)
46 3v47_A TOLL-like receptor 5B a 100.0 1.2E-42 4.1E-47 393.6 24.8 383 24-479 12-412 (455)
47 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-42 4.3E-47 371.8 23.2 272 553-863 9-286 (310)
48 2qkw_B Protein kinase; three-h 100.0 4.5E-43 1.5E-47 377.2 19.7 286 545-861 30-317 (321)
49 3uim_A Brassinosteroid insensi 100.0 5.5E-43 1.9E-47 377.6 19.9 290 539-857 15-309 (326)
50 3q4u_A Activin receptor type-1 100.0 4.5E-42 1.5E-46 366.2 22.5 268 553-857 7-300 (301)
51 3ugc_A Tyrosine-protein kinase 100.0 5.8E-43 2E-47 371.7 15.4 282 553-862 9-294 (295)
52 3soc_A Activin receptor type-2 100.0 3.1E-42 1.1E-46 370.4 20.0 285 553-861 23-320 (322)
53 2c30_A Serine/threonine-protei 100.0 1.4E-41 4.8E-46 364.7 24.3 263 542-853 23-295 (321)
54 3fe3_A MAP/microtubule affinit 100.0 5.2E-42 1.8E-46 368.1 20.1 250 552-853 13-265 (328)
55 1jl5_A Outer protein YOPM; leu 100.0 1.7E-41 5.7E-46 380.3 24.4 398 2-476 16-430 (454)
56 3p86_A Serine/threonine-protei 100.0 3.1E-42 1E-46 367.5 17.2 263 552-862 35-301 (309)
57 3kul_A Ephrin type-A receptor 100.0 4.7E-42 1.6E-46 369.1 18.4 266 553-864 48-318 (325)
58 4eqm_A Protein kinase; transfe 100.0 5.4E-42 1.8E-46 363.4 17.3 268 553-865 10-281 (294)
59 3zgw_A Maternal embryonic leuc 100.0 3.5E-42 1.2E-46 371.2 15.8 252 552-853 8-261 (347)
60 2psq_A Fibroblast growth facto 100.0 1.6E-41 5.4E-46 371.3 21.1 268 553-862 80-367 (370)
61 3lb7_A RAF proto-oncogene seri 100.0 1.6E-41 5.4E-46 361.8 20.2 265 553-863 35-304 (307)
62 1jl5_A Outer protein YOPM; leu 100.0 3.3E-41 1.1E-45 377.9 23.7 390 14-476 5-410 (454)
63 2nru_A Interleukin-1 receptor- 100.0 9.6E-41 3.3E-45 356.9 26.3 284 540-859 11-306 (307)
64 4euu_A Serine/threonine-protei 100.0 4.4E-41 1.5E-45 361.3 22.9 285 553-858 8-308 (319)
65 2yab_A Death-associated protei 100.0 2.4E-41 8.3E-46 367.1 21.0 252 553-852 11-272 (361)
66 1o6l_A RAC-beta serine/threoni 100.0 1.8E-41 6.1E-46 364.8 19.7 249 553-852 4-260 (337)
67 1tki_A Titin; serine kinase, m 100.0 2E-41 6.7E-46 363.1 18.4 253 553-853 4-258 (321)
68 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-42 2.7E-46 375.3 15.3 263 552-861 112-376 (377)
69 3tki_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 363.4 18.1 255 553-853 6-262 (323)
70 2qol_A Ephrin receptor; recept 100.0 2.5E-41 8.4E-46 370.0 18.7 263 553-861 44-311 (373)
71 3o0g_A Cell division protein k 100.0 5.4E-41 1.9E-45 355.8 20.4 277 554-852 2-282 (292)
72 1csn_A Casein kinase-1; phosph 100.0 6.9E-41 2.4E-45 356.4 21.1 274 553-866 9-290 (298)
73 2izr_A Casein kinase I isoform 100.0 4.6E-41 1.6E-45 362.9 19.9 274 553-865 8-287 (330)
74 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-41 8.9E-46 363.0 17.6 248 553-853 8-259 (336)
75 3soa_A Calcium/calmodulin-depe 100.0 8.9E-41 3.1E-45 372.2 22.5 255 551-852 8-267 (444)
76 3niz_A Rhodanese family protei 100.0 9.1E-41 3.1E-45 356.9 21.5 275 553-852 20-300 (311)
77 4hcu_A Tyrosine-protein kinase 100.0 4.8E-41 1.6E-45 351.7 18.6 258 553-860 9-267 (269)
78 3op5_A Serine/threonine-protei 100.0 2.6E-41 9E-46 369.8 17.4 286 552-866 33-336 (364)
79 2y0a_A Death-associated protei 100.0 7E-41 2.4E-45 360.1 20.2 252 553-852 10-271 (326)
80 4dc2_A Protein kinase C IOTA t 100.0 4.5E-41 1.6E-45 367.9 18.5 249 553-847 51-307 (396)
81 3vhe_A Vascular endothelial gr 100.0 1.4E-41 4.9E-46 372.0 14.5 277 545-861 13-357 (359)
82 3g2f_A Bone morphogenetic prot 100.0 5.1E-41 1.8E-45 364.0 18.4 296 553-864 12-323 (336)
83 2bdw_A Hypothetical protein K1 100.0 1.1E-40 3.6E-45 363.4 20.9 254 552-853 27-285 (362)
84 3c0i_A Peripheral plasma membr 100.0 7.1E-41 2.4E-45 363.9 18.8 256 553-852 23-286 (351)
85 2pmi_A Negative RE, cyclin-dep 100.0 1E-40 3.5E-45 357.7 19.7 280 553-852 4-293 (317)
86 4fr4_A YANK1, serine/threonine 100.0 2.8E-40 9.6E-45 360.5 23.4 251 553-852 14-271 (384)
87 3mdy_A Bone morphogenetic prot 100.0 8E-40 2.8E-44 354.8 26.8 278 550-861 33-333 (337)
88 3txo_A PKC-L, NPKC-ETA, protei 100.0 2E-41 6.8E-46 366.9 14.0 250 552-852 21-280 (353)
89 1kob_A Twitchin; kinase, intra 100.0 1.3E-40 4.5E-45 364.6 20.5 253 553-852 50-304 (387)
90 3g33_A Cell division protein k 100.0 1E-40 3.6E-45 356.6 19.1 281 552-852 7-296 (308)
91 3gni_B Strad alpha; kinase fol 100.0 1.6E-40 5.4E-45 367.4 21.1 288 552-853 23-334 (389)
92 3poz_A Epidermal growth factor 100.0 4.4E-41 1.5E-45 362.2 16.2 260 553-860 14-279 (327)
93 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.4E-41 2.9E-45 349.8 17.8 258 553-860 7-265 (268)
94 3a8x_A Protein kinase C IOTA t 100.0 1.4E-40 4.8E-45 359.6 19.9 249 553-847 8-264 (345)
95 1ob3_A PFPK5, cell division co 100.0 9.1E-41 3.1E-45 353.2 18.0 275 554-852 2-280 (288)
96 3l9p_A Anaplastic lymphoma kin 100.0 3.4E-41 1.2E-45 368.5 15.0 269 553-863 70-349 (367)
97 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-40 5.3E-45 353.5 19.6 252 553-852 12-292 (298)
98 3uzp_A CKI-delta, CKID, casein 100.0 4.2E-40 1.4E-44 350.0 22.9 274 553-865 8-286 (296)
99 4f0f_A Serine/threonine-protei 100.0 7.8E-41 2.7E-45 353.8 17.1 254 553-857 18-287 (287)
100 4hgt_A Casein kinase I isoform 100.0 3.3E-40 1.1E-44 350.9 22.1 274 552-864 7-285 (296)
101 4aw2_A Serine/threonine-protei 100.0 4E-41 1.4E-45 373.3 15.4 263 546-852 66-338 (437)
102 3og7_A AKAP9-BRAF fusion prote 100.0 6.7E-41 2.3E-45 354.4 16.2 262 552-859 22-288 (289)
103 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-40 5.2E-45 355.0 19.0 246 553-852 5-258 (318)
104 3qup_A Tyrosine-protein kinase 100.0 7.2E-41 2.5E-45 360.6 16.6 273 552-861 21-300 (323)
105 3ork_A Serine/threonine protei 100.0 2.7E-41 9.2E-46 361.5 13.0 266 553-858 11-280 (311)
106 3lxl_A Tyrosine-protein kinase 100.0 7.5E-41 2.6E-45 360.9 16.3 281 554-864 23-308 (327)
107 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-40 5.2E-45 360.7 18.7 252 552-852 51-305 (349)
108 1xjd_A Protein kinase C, theta 100.0 4.7E-41 1.6E-45 362.4 14.5 251 550-851 13-268 (345)
109 4eut_A Serine/threonine-protei 100.0 1.3E-40 4.6E-45 368.0 18.4 287 553-860 8-310 (396)
110 1luf_A Muscle-specific tyrosin 100.0 1E-40 3.5E-45 362.8 16.7 270 552-863 45-339 (343)
111 2eva_A TAK1 kinase - TAB1 chim 100.0 4E-40 1.4E-44 351.3 20.9 261 554-865 8-269 (307)
112 1mp8_A Focal adhesion kinase 1 100.0 1.3E-40 4.6E-45 350.7 16.9 260 553-861 14-278 (281)
113 3tt0_A Basic fibroblast growth 100.0 3.2E-40 1.1E-44 363.4 20.5 270 553-864 68-357 (382)
114 3gen_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 349.3 18.6 259 552-860 22-281 (283)
115 3dtc_A Mitogen-activated prote 100.0 7.2E-41 2.5E-45 351.0 14.3 254 553-857 6-271 (271)
116 3ttj_A Mitogen-activated prote 100.0 2.5E-40 8.7E-45 371.8 19.5 278 553-852 61-355 (464)
117 3rp9_A Mitogen-activated prote 100.0 2.8E-40 9.6E-45 373.4 19.9 207 553-769 52-280 (458)
118 1o6v_A Internalin A; bacterial 100.0 5.4E-39 1.9E-43 363.7 30.3 357 6-429 33-389 (466)
119 3kex_A Receptor tyrosine-prote 100.0 2.3E-40 7.7E-45 356.5 18.1 259 554-860 13-277 (325)
120 3gxj_A TGF-beta receptor type- 100.0 8.4E-42 2.9E-46 364.5 6.7 272 553-861 2-299 (303)
121 3brb_A Proto-oncogene tyrosine 100.0 1.7E-40 5.7E-45 356.0 16.8 275 551-862 31-311 (313)
122 3qd2_B Eukaryotic translation 100.0 4.8E-40 1.6E-44 355.9 20.5 264 553-852 5-325 (332)
123 1k9a_A Carboxyl-terminal SRC k 100.0 3E-40 1E-44 371.0 19.5 254 553-860 192-446 (450)
124 4e5w_A Tyrosine-protein kinase 100.0 1.7E-40 5.9E-45 354.1 16.7 276 554-858 21-301 (302)
125 3uc3_A Serine/threonine-protei 100.0 2.3E-40 7.9E-45 360.8 18.1 255 552-853 18-275 (361)
126 3kn6_A Ribosomal protein S6 ki 100.0 3E-40 1E-44 354.8 18.7 249 559-852 16-270 (325)
127 2x4f_A Myosin light chain kina 100.0 2.1E-40 7E-45 362.4 17.6 247 559-852 94-342 (373)
128 2i0e_A Protein kinase C-beta I 100.0 2E-40 6.9E-45 358.7 17.2 250 552-852 18-276 (353)
129 3f3z_A Calcium/calmodulin-depe 100.0 5E-40 1.7E-44 345.7 19.8 252 552-852 7-261 (277)
130 1t46_A HOMO sapiens V-KIT hard 100.0 2E-40 6.8E-45 355.6 16.6 270 552-862 21-310 (313)
131 4agu_A Cyclin-dependent kinase 100.0 2E-40 6.9E-45 355.1 16.6 276 554-852 3-284 (311)
132 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-40 8.4E-45 358.2 17.4 246 553-852 40-293 (350)
133 3v8s_A RHO-associated protein 100.0 1E-40 3.4E-45 367.3 14.5 260 547-853 62-330 (410)
134 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-40 5.4E-45 358.0 15.8 282 553-862 40-325 (326)
135 1b6c_B TGF-B superfamily recep 100.0 1.5E-39 5.2E-44 353.4 23.7 276 549-861 37-338 (342)
136 2ivs_A Proto-oncogene tyrosine 100.0 3.1E-40 1E-44 354.3 17.8 267 552-860 21-312 (314)
137 3n9x_A Phosphotransferase; mal 100.0 5.7E-40 2E-44 366.9 20.4 212 553-774 25-253 (432)
138 1mqb_A Ephrin type-A receptor 100.0 8.3E-40 2.8E-44 353.1 20.3 265 554-864 44-314 (333)
139 2a2a_A Death-associated protei 100.0 8.3E-40 2.8E-44 351.6 20.2 252 553-852 11-272 (321)
140 1nxk_A MAP kinase-activated pr 100.0 8.7E-40 3E-44 361.0 20.9 255 553-853 60-322 (400)
141 1t4h_A Serine/threonine-protei 100.0 1.6E-39 5.6E-44 344.2 22.2 252 554-852 26-282 (290)
142 1rjb_A FL cytokine receptor; k 100.0 2E-40 6.7E-45 360.6 15.5 270 552-862 43-337 (344)
143 2wqm_A Serine/threonine-protei 100.0 6.1E-40 2.1E-44 351.1 19.0 270 553-865 31-303 (310)
144 3kk8_A Calcium/calmodulin depe 100.0 1.4E-39 4.9E-44 343.6 21.5 253 553-853 5-262 (284)
145 3f66_A Hepatocyte growth facto 100.0 4.3E-40 1.5E-44 350.2 17.4 267 553-863 24-295 (298)
146 4fvq_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 351.7 13.9 257 553-863 7-279 (289)
147 2y94_A 5'-AMP-activated protei 100.0 4.7E-40 1.6E-44 368.5 18.1 248 553-852 15-266 (476)
148 3t9t_A Tyrosine-protein kinase 100.0 6.9E-40 2.3E-44 342.7 18.2 258 553-860 7-265 (267)
149 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-39 3.9E-44 348.5 20.2 245 554-852 57-304 (311)
150 2vd5_A DMPK protein; serine/th 100.0 2E-40 7E-45 365.1 14.7 262 546-852 53-327 (412)
151 3lzb_A Epidermal growth factor 100.0 2.8E-40 9.5E-45 355.6 15.4 260 553-860 14-279 (327)
152 3cc6_A Protein tyrosine kinase 100.0 4.5E-40 1.5E-44 346.8 16.6 261 552-861 10-275 (281)
153 2eue_A Carbon catabolite derep 100.0 3.7E-40 1.3E-44 346.2 16.0 246 554-852 13-262 (275)
154 3c1x_A Hepatocyte growth facto 100.0 1.9E-40 6.4E-45 362.4 14.2 265 555-863 90-359 (373)
155 3qyz_A Mitogen-activated prote 100.0 8.7E-40 3E-44 357.8 19.5 283 553-852 26-313 (364)
156 3kmu_A ILK, integrin-linked ki 100.0 2.8E-40 9.5E-45 346.6 14.9 255 553-859 9-270 (271)
157 3pls_A Macrophage-stimulating 100.0 9.3E-40 3.2E-44 347.7 19.0 267 555-864 22-292 (298)
158 3cok_A Serine/threonine-protei 100.0 5.6E-40 1.9E-44 345.5 17.0 250 553-852 10-262 (278)
159 2v62_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45 359.8 14.1 277 553-859 36-328 (345)
160 2yex_A Serine/threonine-protei 100.0 1.7E-39 5.7E-44 341.6 20.4 254 553-852 6-261 (276)
161 3hko_A Calcium/calmodulin-depe 100.0 5E-40 1.7E-44 357.6 16.9 267 549-852 21-330 (345)
162 2ac3_A MAP kinase-interacting 100.0 8.2E-40 2.8E-44 351.2 18.4 275 553-852 11-295 (316)
163 3llt_A Serine/threonine kinase 100.0 6.5E-40 2.2E-44 358.7 17.9 211 541-776 22-262 (360)
164 1u59_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 344.5 19.3 264 554-864 9-277 (287)
165 1cm8_A Phosphorylated MAP kina 100.0 7.3E-40 2.5E-44 357.7 18.1 277 553-852 24-307 (367)
166 3i6u_A CDS1, serine/threonine- 100.0 7.2E-40 2.5E-44 364.3 18.4 254 551-852 132-399 (419)
167 1o6v_A Internalin A; bacterial 100.0 9.4E-39 3.2E-43 361.7 27.9 361 29-455 31-391 (466)
168 3kfa_A Tyrosine-protein kinase 100.0 7.7E-40 2.6E-44 346.4 17.7 263 552-862 11-274 (288)
169 3fdn_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 345.2 16.8 249 552-853 7-258 (279)
170 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-40 4.8E-45 356.9 12.0 280 555-865 31-316 (318)
171 2h34_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 347.7 19.5 263 552-861 32-298 (309)
172 3dls_A PAS domain-containing s 100.0 2.6E-40 9E-45 356.7 14.0 244 552-853 22-275 (335)
173 3a62_A Ribosomal protein S6 ki 100.0 6.4E-40 2.2E-44 352.8 16.9 249 553-852 16-276 (327)
174 3oz6_A Mitogen-activated prote 100.0 7.9E-40 2.7E-44 361.4 18.1 288 551-853 6-329 (388)
175 1xbb_A Tyrosine-protein kinase 100.0 4.5E-40 1.5E-44 348.6 15.4 265 552-864 14-284 (291)
176 3bz5_A Internalin-J, INLJ; leu 100.0 7.6E-39 2.6E-43 359.1 26.1 354 20-458 40-393 (457)
177 1ua2_A CAK, cell division prot 100.0 7.5E-40 2.6E-44 355.6 17.4 281 550-853 6-292 (346)
178 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.7E-40 1.6E-44 354.5 15.6 278 550-852 30-318 (329)
179 4ejn_A RAC-alpha serine/threon 100.0 2.9E-40 9.7E-45 371.5 14.4 249 553-852 147-404 (446)
180 2r5t_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 357.4 16.5 251 553-854 37-291 (373)
181 2pvf_A Fibroblast growth facto 100.0 1.2E-39 4.2E-44 352.4 18.7 268 553-862 34-321 (334)
182 1opk_A P150, C-ABL, proto-onco 100.0 3.5E-40 1.2E-44 374.6 15.0 259 553-859 219-478 (495)
183 3mtl_A Cell division protein k 100.0 2.6E-40 8.7E-45 355.8 13.1 275 554-852 2-281 (324)
184 3bhy_A Death-associated protei 100.0 2.4E-39 8.3E-44 341.6 20.4 260 554-861 5-276 (283)
185 3is5_A Calcium-dependent prote 100.0 1.6E-39 5.3E-44 343.1 18.7 254 553-852 21-278 (285)
186 2id5_A Lingo-1, leucine rich r 100.0 4.4E-39 1.5E-43 366.3 23.7 318 2-331 16-333 (477)
187 1u5q_A Serine/threonine protei 100.0 1.2E-39 4.2E-44 353.0 18.2 247 554-853 54-306 (348)
188 2i1m_A Macrophage colony-stimu 100.0 3.9E-40 1.3E-44 356.5 14.3 275 549-864 41-331 (333)
189 2acx_A G protein-coupled recep 100.0 1.3E-39 4.5E-44 369.0 19.0 254 553-852 183-444 (576)
190 2id5_A Lingo-1, leucine rich r 100.0 3.5E-39 1.2E-43 367.1 22.6 347 98-480 15-361 (477)
191 2buj_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 348.6 19.2 278 553-862 28-309 (317)
192 1qcf_A Haematopoetic cell kina 100.0 3.9E-40 1.3E-44 370.7 14.4 260 552-861 186-446 (454)
193 2jii_A Serine/threonine-protei 100.0 8.5E-40 2.9E-44 356.3 16.5 277 553-865 41-342 (352)
194 2a19_B Interferon-induced, dou 100.0 1.7E-39 5.7E-44 343.2 18.2 260 552-864 9-279 (284)
195 2xir_A Vascular endothelial gr 100.0 4.7E-40 1.6E-44 353.2 14.0 277 546-862 19-313 (316)
196 3bz5_A Internalin-J, INLJ; leu 100.0 8.2E-39 2.8E-43 358.8 24.6 350 1-436 46-395 (457)
197 2qr7_A Ribosomal protein S6 ki 100.0 9.8E-40 3.3E-44 352.5 16.4 254 552-853 20-278 (342)
198 2jam_A Calcium/calmodulin-depe 100.0 2.5E-39 8.4E-44 345.2 18.8 251 553-852 8-261 (304)
199 3sv0_A Casein kinase I-like; t 100.0 5.3E-39 1.8E-43 360.7 22.2 273 553-862 6-281 (483)
200 3dbq_A Dual specificity protei 100.0 1.6E-39 5.6E-44 352.5 17.4 252 553-853 8-274 (343)
201 1fvr_A Tyrosine-protein kinase 100.0 1.8E-39 6.1E-44 350.1 17.5 267 554-865 25-306 (327)
202 2rku_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 344.4 17.2 250 553-853 14-266 (294)
203 1p4o_A Insulin-like growth fac 100.0 4.2E-40 1.4E-44 354.5 12.1 273 547-861 18-301 (322)
204 3mi9_A Cell division protein k 100.0 8.5E-39 2.9E-43 348.5 22.6 282 553-852 16-311 (351)
205 1qpc_A LCK kinase; alpha beta 100.0 2.3E-39 8E-44 341.0 17.5 259 553-861 12-271 (279)
206 2y7j_A Phosphorylase B kinase 100.0 6.3E-39 2.1E-43 350.3 21.5 258 547-852 87-359 (365)
207 2clq_A Mitogen-activated prote 100.0 8.6E-39 2.9E-43 339.7 21.9 253 555-852 23-278 (295)
208 3a7i_A MST3 kinase, serine/thr 100.0 4.9E-39 1.7E-43 342.8 19.9 251 553-854 21-272 (303)
209 3lm5_A Serine/threonine-protei 100.0 2.2E-39 7.6E-44 348.9 17.4 269 538-852 12-287 (327)
210 1byg_A CSK, protein (C-termina 100.0 1.2E-39 4.1E-44 342.9 14.9 255 553-861 20-275 (278)
211 4aaa_A Cyclin-dependent kinase 100.0 4.8E-40 1.6E-44 355.1 12.1 277 553-852 24-306 (331)
212 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.3E-39 1.5E-43 364.4 20.4 257 553-852 184-448 (543)
213 2vgo_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 341.2 17.7 247 553-852 13-262 (284)
214 2zmd_A Dual specificity protei 100.0 3.7E-39 1.3E-43 354.9 19.1 251 554-853 56-321 (390)
215 2ozo_A Tyrosine-protein kinase 100.0 3.2E-39 1.1E-43 375.1 19.5 259 561-866 343-605 (613)
216 2owb_A Serine/threonine-protei 100.0 2E-39 7E-44 350.5 16.7 250 553-853 40-292 (335)
217 2fst_X Mitogen-activated prote 100.0 8.2E-40 2.8E-44 356.8 13.2 277 553-852 28-311 (367)
218 3ll6_A Cyclin G-associated kin 100.0 7.3E-39 2.5E-43 347.3 20.7 273 553-863 27-312 (337)
219 3nsz_A CK II alpha, casein kin 100.0 2E-39 7E-44 350.4 16.1 272 554-852 36-319 (330)
220 2xrw_A Mitogen-activated prote 100.0 9.8E-39 3.4E-43 350.0 21.6 279 553-853 24-319 (371)
221 4fl3_A Tyrosine-protein kinase 100.0 4.3E-39 1.5E-43 374.8 19.7 255 560-862 375-634 (635)
222 2yfx_A Tyrosine-protein kinase 100.0 2.6E-39 9.1E-44 348.8 16.6 268 553-862 29-307 (327)
223 2w5a_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 343.2 13.4 259 553-855 5-270 (279)
224 3mwu_A Calmodulin-domain prote 100.0 6.1E-39 2.1E-43 364.9 20.1 253 552-853 20-277 (486)
225 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-39 5.7E-44 365.1 15.2 258 553-860 183-441 (452)
226 2r3i_A Cell division protein k 100.0 5E-39 1.7E-43 342.2 18.1 277 554-852 3-283 (299)
227 3eb0_A Putative uncharacterize 100.0 1.8E-39 6.2E-44 357.7 15.1 282 550-852 3-321 (383)
228 3byv_A Rhoptry kinase; malaria 100.0 2.8E-40 9.4E-45 363.4 8.4 260 553-861 72-370 (377)
229 2b9h_A MAP kinase FUS3, mitoge 100.0 5.5E-39 1.9E-43 350.5 18.6 288 553-852 10-305 (353)
230 3eqc_A Dual specificity mitoge 100.0 3.7E-39 1.3E-43 352.6 17.2 201 553-776 32-233 (360)
231 3com_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 341.5 20.7 252 552-852 27-278 (314)
232 2j7t_A Serine/threonine-protei 100.0 2.5E-39 8.7E-44 345.0 14.7 253 553-852 18-275 (302)
233 3kvw_A DYRK2, dual specificity 100.0 8.9E-39 3E-43 356.4 19.7 199 553-776 96-302 (429)
234 3pg1_A Mitogen-activated prote 100.0 1.1E-38 3.7E-43 349.4 19.9 288 545-852 13-316 (362)
235 3lij_A Calcium/calmodulin depe 100.0 6.4E-39 2.2E-43 365.2 18.8 252 553-853 36-292 (494)
236 2h6d_A 5'-AMP-activated protei 100.0 5.9E-39 2E-43 337.4 17.0 249 553-853 10-262 (276)
237 2ycf_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 345.1 17.4 253 552-852 8-274 (322)
238 3q5i_A Protein kinase; CDPK, m 100.0 1.2E-38 4E-43 364.1 20.2 253 552-853 34-302 (504)
239 2i6l_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 346.5 15.5 280 553-853 10-306 (320)
240 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.8E-39 1.6E-43 352.2 16.2 260 551-861 62-341 (365)
241 3nyv_A Calmodulin-domain prote 100.0 3.7E-39 1.3E-43 366.9 15.5 252 553-853 25-282 (484)
242 2x7f_A TRAF2 and NCK-interacti 100.0 5.1E-39 1.8E-43 346.6 15.6 266 544-852 14-286 (326)
243 3fme_A Dual specificity mitoge 100.0 1.6E-38 5.6E-43 336.6 18.2 255 553-852 6-266 (290)
244 1phk_A Phosphorylase kinase; g 100.0 2.6E-38 9E-43 336.4 19.7 254 551-852 14-283 (298)
245 4exu_A Mitogen-activated prote 100.0 1.1E-38 3.8E-43 349.6 17.0 277 553-853 41-324 (371)
246 1x8b_A WEE1HU, WEE1-like prote 100.0 3.8E-38 1.3E-42 333.6 20.5 248 552-852 9-279 (289)
247 1u46_A ACK-1, activated CDC42 100.0 1.9E-39 6.4E-44 344.1 10.1 263 553-861 17-286 (291)
248 1vzo_A Ribosomal protein S6 ki 100.0 6.1E-39 2.1E-43 349.2 14.3 256 553-854 53-323 (355)
249 1blx_A Cyclin-dependent kinase 100.0 3.5E-38 1.2E-42 340.2 19.9 279 551-852 8-296 (326)
250 3q60_A ROP5B; pseudokinase, tr 100.0 5.1E-39 1.7E-43 352.7 13.3 268 553-860 61-362 (371)
251 2vwi_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 343.3 12.6 272 551-852 12-287 (303)
252 1wak_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 350.4 19.5 280 553-852 36-391 (397)
253 2wtk_C Serine/threonine-protei 100.0 1.3E-37 4.4E-42 332.4 23.2 255 553-853 4-264 (305)
254 3pfq_A PKC-B, PKC-beta, protei 100.0 1.5E-38 5.3E-43 372.7 17.5 250 552-852 339-597 (674)
255 2h8h_A Proto-oncogene tyrosine 100.0 6.6E-39 2.3E-43 367.4 14.0 259 552-860 265-524 (535)
256 3an0_A Dual specificity mitoge 100.0 2.8E-38 9.6E-43 342.8 17.4 256 552-852 49-310 (340)
257 1j1b_A Glycogen synthase kinas 100.0 9.6E-39 3.3E-43 355.4 13.8 275 553-852 53-336 (420)
258 2vx3_A Dual specificity tyrosi 100.0 5.6E-38 1.9E-42 345.6 19.3 203 551-776 51-261 (382)
259 4e7w_A Glycogen synthase kinas 100.0 1.5E-38 5.1E-43 350.9 14.3 278 553-852 39-321 (394)
260 1zy4_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 335.4 17.2 265 552-852 4-283 (303)
261 2wei_A Calmodulin-domain prote 100.0 9.8E-38 3.3E-42 329.9 19.3 253 551-852 19-276 (287)
262 3fhr_A MAP kinase-activated pr 100.0 4.3E-38 1.5E-42 340.0 16.8 259 552-853 26-288 (336)
263 1z57_A Dual specificity protei 100.0 1.8E-37 6E-42 336.8 20.7 274 553-852 13-328 (339)
264 3coi_A Mitogen-activated prote 100.0 5E-38 1.7E-42 342.5 16.0 276 553-852 23-305 (353)
265 3cek_A Dual specificity protei 100.0 3.9E-38 1.3E-42 337.4 14.8 261 544-853 18-293 (313)
266 3e3p_A Protein kinase, putativ 100.0 6.4E-38 2.2E-42 343.1 16.6 289 547-852 16-314 (360)
267 2j0j_A Focal adhesion kinase 1 100.0 7.3E-38 2.5E-42 365.9 18.1 261 552-861 388-653 (656)
268 2pml_X PFPK7, Ser/Thr protein 100.0 6.8E-38 2.3E-42 341.2 15.9 266 553-852 30-322 (348)
269 3aln_A Dual specificity mitoge 100.0 1.2E-37 4.1E-42 335.9 17.1 259 553-852 21-285 (327)
270 3rgf_A Cyclin-dependent kinase 100.0 1.2E-37 4.2E-42 345.8 17.1 209 554-776 20-239 (405)
271 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-38 1.1E-42 339.5 11.6 264 552-862 31-305 (319)
272 1q8y_A SR protein kinase; tran 100.0 1.9E-37 6.5E-42 341.2 16.0 280 553-852 18-333 (373)
273 2iwi_A Serine/threonine-protei 100.0 5.1E-38 1.8E-42 336.5 10.6 246 548-852 25-283 (312)
274 3o6n_A APL1; leucine-rich repe 100.0 7.1E-37 2.4E-41 338.3 19.9 335 69-479 44-378 (390)
275 2eu9_A Dual specificity protei 100.0 1.7E-36 5.9E-41 331.2 22.7 273 553-852 18-333 (355)
276 3qa8_A MGC80376 protein; kinas 100.0 3.4E-37 1.2E-41 352.2 17.4 286 553-859 13-309 (676)
277 3a99_A Proto-oncogene serine/t 100.0 4E-38 1.4E-42 338.0 8.8 242 552-852 41-293 (320)
278 3o6n_A APL1; leucine-rich repe 100.0 2.5E-36 8.5E-41 333.9 22.7 311 20-405 43-353 (390)
279 2dyl_A Dual specificity mitoge 100.0 4.5E-37 1.5E-41 330.2 15.9 252 553-852 24-283 (318)
280 3oja_B Anopheles plasmodium-re 100.0 1.8E-36 6.2E-41 353.4 21.5 343 69-487 50-392 (597)
281 2rio_A Serine/threonine-protei 100.0 8.3E-37 2.8E-41 341.3 17.3 257 555-852 16-295 (434)
282 3p23_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 336.7 17.7 251 553-852 23-283 (432)
283 3uqc_A Probable conserved tran 100.0 4.8E-36 1.6E-40 315.4 18.0 234 554-861 31-267 (286)
284 3oja_B Anopheles plasmodium-re 100.0 1.6E-35 5.6E-40 345.4 22.8 310 21-405 50-359 (597)
285 2pzi_A Probable serine/threoni 100.0 6.9E-36 2.4E-40 353.3 17.7 248 553-860 79-329 (681)
286 3dzo_A Rhoptry kinase domain; 100.0 2E-36 7E-41 335.8 11.7 251 553-852 77-363 (413)
287 3m2w_A MAP kinase-activated pr 100.0 2.2E-35 7.7E-40 313.6 17.4 237 553-853 16-257 (299)
288 4fmz_A Internalin; leucine ric 100.0 2.4E-34 8.1E-39 313.0 25.0 308 41-452 39-346 (347)
289 4fmz_A Internalin; leucine ric 100.0 2.7E-34 9.1E-39 312.6 25.0 284 19-331 41-324 (347)
290 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-35 5.9E-40 315.7 14.8 255 224-480 52-309 (313)
291 2ft3_A Biglycan; proteoglycan, 100.0 2.3E-34 7.9E-39 310.6 22.1 305 5-329 12-331 (332)
292 1xku_A Decorin; proteoglycan, 100.0 1.5E-33 5.2E-38 304.0 25.7 291 21-329 30-330 (330)
293 1xku_A Decorin; proteoglycan, 100.0 5E-33 1.7E-37 300.0 25.2 285 2-305 36-330 (330)
294 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-33 6E-38 303.6 21.2 284 2-305 38-331 (332)
295 2vuw_A Serine/threonine-protei 100.0 2.2E-34 7.5E-39 311.4 13.4 247 553-851 19-329 (336)
296 1ogq_A PGIP-2, polygalacturona 100.0 9.6E-34 3.3E-38 302.2 15.5 253 197-454 50-307 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 3.7E-37 1.3E-41 349.2 -15.6 364 22-429 3-412 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 7.3E-36 2.5E-40 338.6 -13.4 390 1-433 7-445 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 1.5E-31 5.1E-36 291.2 13.3 273 3-308 37-315 (353)
300 2z80_A TOLL-like receptor 2, v 100.0 3E-30 1E-34 280.9 16.3 282 20-335 29-318 (353)
301 2z66_A Variable lymphocyte rec 100.0 1.5E-30 5.3E-35 277.3 13.7 280 2-318 12-298 (306)
302 3zyi_A Leucine-rich repeat-con 100.0 3.7E-29 1.3E-33 281.8 23.4 248 23-307 55-303 (452)
303 3zyj_A Leucine-rich repeat-con 100.0 4.1E-29 1.4E-33 280.4 23.3 248 23-307 44-292 (440)
304 3zyi_A Leucine-rich repeat-con 100.0 2.5E-29 8.7E-34 283.2 21.2 244 2-283 59-303 (452)
305 3zyj_A Leucine-rich repeat-con 100.0 2.7E-29 9.2E-34 281.9 20.8 244 2-283 48-292 (440)
306 1ozn_A Reticulon 4 receptor; N 100.0 8.8E-30 3E-34 268.3 15.3 266 2-304 16-284 (285)
307 2z66_A Variable lymphocyte rec 100.0 3.3E-29 1.1E-33 267.0 17.6 251 48-333 9-263 (306)
308 1ozn_A Reticulon 4 receptor; N 100.0 3.3E-29 1.1E-33 264.0 15.3 269 24-328 13-284 (285)
309 3o53_A Protein LRIM1, AGAP0063 100.0 4.3E-30 1.5E-34 274.8 5.5 264 3-312 16-281 (317)
310 4fcg_A Uncharacterized protein 100.0 2.5E-28 8.5E-33 261.8 19.2 226 197-453 81-315 (328)
311 3ogk_B Coronatine-insensitive 100.0 3.4E-32 1.2E-36 318.7 -11.8 417 12-454 63-528 (592)
312 3ogk_B Coronatine-insensitive 100.0 2E-31 7E-36 312.2 -5.6 394 19-447 109-546 (592)
313 4fcg_A Uncharacterized protein 100.0 3.5E-28 1.2E-32 260.7 19.0 234 21-306 80-313 (328)
314 3g06_A SSPH2 (leucine-rich rep 100.0 6.9E-28 2.4E-32 277.7 20.1 277 13-341 31-307 (622)
315 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-27 5.6E-32 274.5 21.8 269 46-367 40-308 (622)
316 3o53_A Protein LRIM1, AGAP0063 100.0 1.8E-29 6.1E-34 270.0 4.7 268 22-335 10-280 (317)
317 4azs_A Methyltransferase WBDD; 99.9 4.7E-29 1.6E-33 285.8 7.0 187 561-773 241-438 (569)
318 1wwl_A Monocyte differentiatio 99.9 2.6E-29 8.9E-34 268.1 2.4 202 224-453 97-310 (312)
319 1wwl_A Monocyte differentiatio 99.9 2.4E-28 8.3E-33 260.5 8.8 255 15-284 36-310 (312)
320 3oja_A Leucine-rich immune mol 99.9 9.8E-28 3.3E-32 271.4 11.1 237 196-447 33-270 (487)
321 3oja_A Leucine-rich immune mol 99.9 1.2E-27 4.1E-32 270.6 9.1 234 23-302 35-270 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 2.6E-26 8.9E-31 240.5 16.3 225 2-260 12-238 (276)
323 2z62_A TOLL-like receptor 4, v 99.9 1.3E-25 4.4E-30 235.2 18.2 228 202-458 12-243 (276)
324 2o6q_A Variable lymphocyte rec 99.9 2.1E-25 7.3E-30 232.5 19.3 203 22-235 16-218 (270)
325 2p1m_B Transport inhibitor res 99.9 2.4E-29 8.1E-34 294.8 -12.5 312 12-326 56-405 (594)
326 2p1m_B Transport inhibitor res 99.9 4.7E-29 1.6E-33 292.3 -11.9 414 25-452 46-519 (594)
327 2o6q_A Variable lymphocyte rec 99.9 1.5E-24 5E-29 226.2 21.0 198 2-210 21-218 (270)
328 3rfs_A Internalin B, repeat mo 99.9 1.7E-24 5.9E-29 225.8 17.7 202 117-331 17-218 (272)
329 3rfs_A Internalin B, repeat mo 99.9 1.1E-24 3.9E-29 227.1 16.3 229 22-271 19-247 (272)
330 1p9a_G Platelet glycoprotein I 99.9 1.1E-24 3.8E-29 228.9 16.3 199 224-454 12-210 (290)
331 1p9a_G Platelet glycoprotein I 99.9 2.7E-24 9.2E-29 226.0 17.8 203 18-235 6-208 (290)
332 2xwt_C Thyrotropin receptor; s 99.9 1.6E-24 5.6E-29 221.5 13.2 188 8-210 22-218 (239)
333 3goz_A Leucine-rich repeat-con 99.9 2.2E-25 7.5E-30 243.0 6.3 260 2-285 3-299 (362)
334 3en9_A Glycoprotease, O-sialog 99.9 3.2E-25 1.1E-29 252.6 6.2 193 555-774 337-539 (540)
335 3goz_A Leucine-rich repeat-con 99.9 3.3E-25 1.1E-29 241.6 4.6 263 26-311 2-301 (362)
336 3m19_A Variable lymphocyte rec 99.9 2.1E-23 7.1E-28 214.8 16.4 181 22-212 14-194 (251)
337 2xwt_C Thyrotropin receptor; s 99.9 6.5E-24 2.2E-28 217.0 11.7 206 33-280 22-236 (239)
338 4glp_A Monocyte differentiatio 99.9 1.3E-23 4.4E-28 223.8 13.7 229 197-453 64-308 (310)
339 4ay9_X Follicle-stimulating ho 99.9 1.6E-23 5.4E-28 227.1 13.5 240 2-281 14-257 (350)
340 3m19_A Variable lymphocyte rec 99.9 9.5E-23 3.2E-27 209.9 17.9 176 2-182 19-194 (251)
341 4glp_A Monocyte differentiatio 99.9 9.6E-24 3.3E-28 224.8 9.9 229 22-260 64-308 (310)
342 4ay9_X Follicle-stimulating ho 99.9 5.2E-23 1.8E-27 223.0 15.3 243 49-329 12-257 (350)
343 1h6u_A Internalin H; cell adhe 99.9 7.1E-23 2.4E-27 217.4 14.1 212 22-283 19-230 (308)
344 2ca6_A RAN GTPase-activating p 99.9 1.4E-25 4.8E-30 247.2 -7.2 79 28-107 15-107 (386)
345 1h6u_A Internalin H; cell adhe 99.9 2.5E-22 8.5E-27 213.2 17.8 205 4-235 26-230 (308)
346 2ca6_A RAN GTPase-activating p 99.9 6.1E-25 2.1E-29 242.1 -2.4 260 6-283 18-316 (386)
347 1zar_A RIO2 kinase; serine kin 99.9 5.3E-23 1.8E-27 214.5 10.8 153 547-747 83-253 (282)
348 2ast_B S-phase kinase-associat 99.9 2.2E-23 7.7E-28 225.2 4.9 255 47-316 48-315 (336)
349 2ast_B S-phase kinase-associat 99.9 2.5E-23 8.5E-28 224.8 4.7 256 71-340 48-315 (336)
350 2o6s_A Variable lymphocyte rec 99.9 1.5E-21 5E-26 194.8 12.5 180 25-221 10-189 (208)
351 2o6s_A Variable lymphocyte rec 99.8 9.8E-21 3.3E-25 188.8 13.6 179 48-244 9-187 (208)
352 3cvr_A Invasion plasmid antige 99.8 9.2E-21 3.2E-25 215.5 14.8 168 247-440 81-255 (571)
353 2xot_A Amphoterin-induced prot 99.8 3.2E-21 1.1E-25 209.8 8.9 178 24-211 20-203 (361)
354 2v9t_B SLIT homolog 2 protein 99.8 1.7E-20 5.7E-25 188.4 12.4 152 25-180 14-165 (220)
355 2v9t_B SLIT homolog 2 protein 99.8 3.6E-20 1.2E-24 185.9 14.1 150 2-156 16-165 (220)
356 3cvr_A Invasion plasmid antige 99.8 2.3E-20 7.8E-25 212.3 14.0 197 22-247 59-255 (571)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 2.5E-20 8.4E-25 187.2 12.6 153 25-181 14-167 (220)
358 1h6t_A Internalin B; cell adhe 99.8 3.2E-20 1.1E-24 195.1 13.3 189 24-236 26-214 (291)
359 1m9s_A Internalin B; cell inva 99.8 5.3E-20 1.8E-24 211.8 14.8 192 22-237 21-212 (605)
360 1h6t_A Internalin B; cell adhe 99.8 2.3E-20 7.8E-25 196.2 10.2 170 20-210 44-213 (291)
361 1m9s_A Internalin B; cell inva 99.8 5.6E-20 1.9E-24 211.6 13.9 185 3-211 27-211 (605)
362 2xot_A Amphoterin-induced prot 99.8 3.9E-20 1.3E-24 201.1 11.6 181 48-235 20-202 (361)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 1.5E-19 5.2E-24 181.3 14.4 151 50-210 15-166 (220)
364 3e6j_A Variable lymphocyte rec 99.8 2.8E-19 9.5E-24 180.8 15.9 152 24-180 21-172 (229)
365 3sb4_A Hypothetical leucine ri 99.8 1.5E-19 5E-24 194.1 9.1 288 21-325 24-328 (329)
366 1zth_A RIO1 serine protein kin 99.8 2E-19 6.9E-24 185.2 9.2 139 554-715 47-219 (258)
367 1xeu_A Internalin C; cellular 99.8 1.3E-19 4.4E-24 187.3 6.7 171 20-212 17-187 (263)
368 1dce_A Protein (RAB geranylger 99.8 4.3E-21 1.5E-25 219.7 -5.8 104 193-300 459-566 (567)
369 3e6j_A Variable lymphocyte rec 99.8 3.9E-18 1.3E-22 172.3 15.5 155 47-212 20-174 (229)
370 1xeu_A Internalin C; cellular 99.8 1.2E-18 4.2E-23 179.9 12.0 166 2-184 24-189 (263)
371 3sb4_A Hypothetical leucine ri 99.8 2.9E-19 1E-23 191.7 7.4 264 21-301 48-328 (329)
372 1dce_A Protein (RAB geranylger 99.8 3.2E-21 1.1E-25 220.8 -8.8 192 243-458 346-552 (567)
373 4ezg_A Putative uncharacterize 99.8 1.8E-18 6.3E-23 170.4 10.9 181 9-211 14-195 (197)
374 4fdw_A Leucine rich hypothetic 99.8 2.5E-17 8.6E-22 180.2 20.5 268 19-307 110-383 (401)
375 4ezg_A Putative uncharacterize 99.7 2.7E-18 9.3E-23 169.2 10.2 152 20-180 42-194 (197)
376 4fdw_A Leucine rich hypothetic 99.7 5.3E-17 1.8E-21 177.6 21.1 269 42-331 109-383 (401)
377 1w8a_A SLIT protein; signaling 99.7 1.3E-18 4.4E-23 170.6 7.1 133 297-456 11-143 (192)
378 4b8c_D Glucose-repressible alc 99.7 1.5E-18 5.1E-23 205.1 5.5 163 203-377 207-369 (727)
379 1w8a_A SLIT protein; signaling 99.7 1.9E-17 6.3E-22 162.3 12.2 177 273-480 11-188 (192)
380 4b8c_D Glucose-repressible alc 99.7 2.2E-18 7.7E-23 203.6 5.8 162 77-256 208-369 (727)
381 2wfh_A SLIT homolog 2 protein 99.7 2E-17 7E-22 161.9 10.7 125 2-156 15-139 (193)
382 2ell_A Acidic leucine-rich nuc 99.7 3.5E-17 1.2E-21 156.8 9.7 137 21-183 23-163 (168)
383 4fs7_A Uncharacterized protein 99.7 4.5E-16 1.6E-20 171.3 19.8 336 33-420 58-393 (394)
384 4fs7_A Uncharacterized protein 99.7 6.8E-16 2.3E-20 169.9 20.1 336 57-444 58-393 (394)
385 2wfh_A SLIT homolog 2 protein 99.7 2.2E-16 7.4E-21 154.5 11.8 127 25-180 13-139 (193)
386 2o6r_A Variable lymphocyte rec 99.7 2.5E-16 8.4E-21 152.3 10.8 132 24-159 9-140 (177)
387 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.6E-21 150.0 7.6 130 20-175 15-148 (149)
388 2ell_A Acidic leucine-rich nuc 99.6 1.4E-16 4.6E-21 152.7 8.0 139 46-215 24-164 (168)
389 4gyi_A RIO2 kinase; protein ki 99.6 3E-16 1E-20 166.7 9.5 141 551-716 92-266 (397)
390 2o6r_A Variable lymphocyte rec 99.6 9.3E-16 3.2E-20 148.2 12.0 128 49-180 10-137 (177)
391 1a9n_A U2A', U2A'; complex (nu 99.6 3.7E-16 1.3E-20 150.8 6.7 146 1-155 1-152 (176)
392 2je0_A Acidic leucine-rich nuc 99.6 5E-16 1.7E-20 145.4 7.3 132 45-206 16-149 (149)
393 1ds9_A Outer arm dynein; leuci 99.6 2.9E-17 9.9E-22 162.0 -5.2 154 19-180 15-185 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.6 1.4E-15 4.8E-20 146.7 6.4 112 40-156 13-126 (176)
395 3g39_A Variable lymphocyte rec 99.5 1.1E-14 3.8E-19 139.2 10.1 102 2-107 14-115 (170)
396 4gt6_A Cell surface protein; l 99.5 4.3E-13 1.5E-17 147.4 24.1 335 35-427 52-390 (394)
397 2r9u_A Variable lymphocyte rec 99.5 1.8E-14 6.3E-19 138.1 10.2 102 2-107 17-118 (174)
398 1ds9_A Outer arm dynein; leuci 99.5 7E-17 2.4E-21 159.2 -7.9 83 366-452 92-185 (198)
399 4gt6_A Cell surface protein; l 99.5 9.4E-13 3.2E-17 144.7 22.8 337 57-451 50-390 (394)
400 3g39_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 134.6 9.4 106 348-456 14-119 (170)
401 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 132.4 10.0 102 24-129 14-115 (174)
402 3un9_A NLR family member X1; l 99.4 7.9E-15 2.7E-19 158.7 -5.1 83 136-220 176-262 (372)
403 2ifg_A High affinity nerve gro 99.4 9.2E-13 3.1E-17 142.3 10.1 102 2-107 13-116 (347)
404 3un9_A NLR family member X1; l 99.3 1.5E-14 5.2E-19 156.6 -6.1 140 70-211 72-225 (372)
405 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.7E-17 140.3 6.7 130 348-480 13-146 (347)
406 4h09_A Hypothetical leucine ri 99.3 3E-10 1E-14 124.1 23.0 289 19-328 43-343 (379)
407 3tm0_A Aminoglycoside 3'-phosp 99.3 1.2E-11 4.2E-16 127.6 11.3 147 549-713 9-212 (263)
408 4h09_A Hypothetical leucine ri 99.2 6.7E-10 2.3E-14 121.3 22.6 310 40-414 40-355 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3.6E-10 1.2E-14 116.5 7.6 137 554-713 20-213 (264)
410 2ra8_A Uncharacterized protein 98.9 2E-10 6.9E-15 122.9 1.3 82 23-107 108-206 (362)
411 3dxp_A Putative acyl-COA dehyd 98.9 2.9E-09 9.8E-14 115.3 9.9 145 558-714 42-248 (359)
412 3sg8_A APH(2'')-ID; antibiotic 98.8 1.7E-09 5.9E-14 114.0 5.8 196 559-773 25-287 (304)
413 2ra8_A Uncharacterized protein 98.8 6.3E-10 2.2E-14 119.1 1.9 189 20-233 137-341 (362)
414 3r70_A Aminoglycoside phosphot 98.6 1.7E-07 5.8E-12 99.3 12.3 136 555-714 38-237 (320)
415 3rw6_A Nuclear RNA export fact 98.6 3E-09 1E-13 107.6 -1.7 64 43-108 167-234 (267)
416 1io0_A Tropomodulin; LRR prote 98.5 1.9E-08 6.5E-13 97.0 1.2 117 40-156 30-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.4E-08 5E-13 97.8 -0.2 124 64-210 30-164 (185)
418 3rw6_A Nuclear RNA export fact 98.5 1E-07 3.5E-12 96.4 5.8 96 2-100 148-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.5 1E-06 3.5E-11 90.9 13.2 135 561-713 31-222 (272)
420 3d1u_A Putative fructosamine-3 98.4 1.3E-06 4.5E-11 90.4 12.2 143 559-713 20-215 (288)
421 3tdw_A Gentamicin resistance p 98.4 2.5E-06 8.4E-11 89.5 13.4 136 559-713 24-223 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 5.9E-06 2E-10 88.7 11.6 76 558-644 45-122 (362)
423 3ats_A Putative uncharacterize 98.0 8.9E-06 3.1E-10 87.5 9.0 83 560-644 26-121 (357)
424 2olc_A MTR kinase, methylthior 97.9 2E-05 6.9E-10 86.1 9.5 76 559-641 35-120 (397)
425 3f7w_A Putative fructosamine-3 97.9 4.3E-05 1.5E-09 79.3 10.8 78 555-642 16-96 (288)
426 3e4g_A ATP synthase subunit S, 97.8 6.1E-06 2.1E-10 77.1 1.6 34 71-104 62-95 (176)
427 3e4g_A ATP synthase subunit S, 97.8 6.1E-06 2.1E-10 77.0 1.4 84 367-450 61-150 (176)
428 3jr1_A Putative fructosamine-3 97.7 0.00022 7.6E-09 74.2 11.9 141 559-710 41-232 (312)
429 2q83_A YTAA protein; 2635576, 97.6 0.00036 1.2E-08 74.3 12.9 148 560-713 38-251 (346)
430 1pgv_A TMD-1, tropomodulin TMD 97.5 1.2E-05 4.2E-10 76.5 -0.1 69 137-207 64-136 (197)
431 1pgv_A TMD-1, tropomodulin TMD 97.5 1.6E-05 5.6E-10 75.7 0.1 78 136-215 34-116 (197)
432 2pyw_A Uncharacterized protein 97.4 0.00052 1.8E-08 75.3 10.4 78 683-770 231-313 (420)
433 3rfe_A Platelet glycoprotein I 97.1 0.00032 1.1E-08 62.4 4.6 57 25-83 11-68 (130)
434 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 68.2 10.0 71 559-643 23-95 (301)
435 2ppq_A HSK, HK, homoserine kin 97.1 0.0043 1.5E-07 65.2 13.5 168 542-713 5-216 (322)
436 2yle_A Protein spire homolog 1 97.0 0.0018 6E-08 61.8 8.4 105 640-773 32-136 (229)
437 2qg7_A Ethanolamine kinase PV0 97.0 0.0017 5.8E-08 71.4 9.5 75 559-643 113-188 (458)
438 1zyl_A Hypothetical protein YI 97.0 0.0047 1.6E-07 65.1 12.7 166 541-713 8-222 (328)
439 3csv_A Aminoglycoside phosphot 97.0 0.0059 2E-07 64.5 13.2 144 560-714 24-217 (333)
440 3feg_A Choline/ethanolamine ki 97.0 0.0025 8.4E-08 68.2 10.2 145 559-713 55-253 (379)
441 3rfe_A Platelet glycoprotein I 96.9 0.0019 6.4E-08 57.4 7.1 57 49-107 11-68 (130)
442 3c5i_A Choline kinase; choline 96.6 0.0035 1.2E-07 67.4 7.7 73 560-642 39-120 (369)
443 1nw1_A Choline kinase (49.2 KD 96.5 0.011 3.7E-07 64.7 11.4 74 559-643 78-159 (429)
444 3i1a_A Spectinomycin phosphotr 96.3 0.013 4.6E-07 61.8 10.2 31 684-714 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.1 0.086 2.9E-06 56.4 10.8 145 560-713 58-279 (401)
446 3mes_A Choline kinase; malaria 95.0 0.026 8.9E-07 61.1 6.3 74 560-643 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.7 0.25 8.5E-06 53.3 8.7 28 686-713 246-279 (401)
448 2jwa_A Receptor tyrosine-prote 78.7 1.8 6.1E-05 29.1 3.1 16 513-528 26-41 (44)
449 4ano_A ESSB; membrane protein, 77.4 3.6 0.00012 39.3 6.1 103 629-775 61-164 (219)
450 2ks1_B Epidermal growth factor 75.4 2.4 8.3E-05 28.6 3.0 13 516-528 29-41 (44)
451 4ann_A ESSB; membrane protein, 75.3 4.2 0.00014 38.7 5.9 119 609-777 43-161 (215)
452 3cxl_A N-chimerin; SH2, RHO-GA 71.1 0.42 1.5E-05 52.4 -2.4 62 557-621 145-214 (463)
453 2lz0_A Uncharacterized protein 62.0 15 0.0005 30.2 5.8 46 33-79 7-52 (100)
454 2l2t_A Receptor tyrosine-prote 58.8 8.8 0.0003 25.9 3.1 13 516-528 28-40 (44)
455 2lz0_A Uncharacterized protein 55.7 19 0.00064 29.5 5.5 51 5-57 4-54 (100)
456 2k9y_A Ephrin type-A receptor 40.3 19 0.00064 23.8 2.5 9 503-511 16-24 (41)
457 2k1k_A Ephrin type-A receptor 40.2 26 0.0009 22.8 3.0 13 499-511 13-25 (38)
458 3ls8_A Phosphatidylinositol 3- 32.1 5.7E+02 0.019 28.4 14.3 47 660-713 453-501 (614)
459 2klu_A T-cell surface glycopro 25.5 41 0.0014 24.6 2.3 18 502-519 12-29 (70)
460 3hhm_A Phosphatidylinositol-4, 20.1 1.4E+02 0.0048 35.7 6.8 47 660-713 912-961 (1091)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.7e-62 Score=583.47 Aligned_cols=479 Identities=32% Similarity=0.516 Sum_probs=380.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCc---------------------
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGG--------------------- 60 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~--------------------- 60 (869)
||+++|++++.+|. + ..+++|++|+|++|.+++.+|..|.++++|++|+|++|++.+
T Consensus 205 L~Ls~n~l~~~~~~-l-~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~ 282 (768)
T 3rgz_A 205 LDVSSNNFSTGIPF-L-GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFT 282 (768)
T ss_dssp EECCSSCCCSCCCB-C-TTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEE
T ss_pred EECcCCcCCCCCcc-c-ccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccC
Confidence 56667777655655 3 356677777777777766666666666666666666665554
Q ss_pred -cCCccccCC-CCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceecccc
Q 002897 61 -KIPDTLGQL-RKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPIS 138 (869)
Q Consensus 61 -~~p~~~~~l-~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 138 (869)
.+|..+..+ ++|++|+|++|++++.+|..|.++++|++|+|++|++.+.+|...+..+++|++|++++|.+++.+|..
T Consensus 283 ~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp ESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred CccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 455555543 667777777777766667777777777777777777766666666677777777777777777666766
Q ss_pred ccCCC-CCcEEEccCCccccccCcCccC--CCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCCh
Q 002897 139 LSNAS-NLELLELRDNQFIGKMSINFNS--LKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPH 215 (869)
Q Consensus 139 l~~l~-~L~~L~L~~N~i~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 215 (869)
+.+++ +|++|++++|++++..+..+.. +++|++|++++|.++... +..+..+++|++|++++|++++..|.
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~ 436 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI------PPTLSNCSELVSLHLSFNYLSGTIPS 436 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEEC------CGGGGGCTTCCEEECCSSEEESCCCG
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcccccc------CHHHhcCCCCCEEECcCCcccCcccH
Confidence 66665 6777777777776666666555 667777777777776433 23577888888888888888888888
Q ss_pred hhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCcc
Q 002897 216 SLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTM 295 (869)
Q Consensus 216 ~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 295 (869)
.+..+++ |+.|++++|.+++.+|..+..+++|++|++++|++.+.+|..++.+++|++|+|++|++++.+|..++.+++
T Consensus 437 ~l~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 515 (768)
T 3rgz_A 437 SLGSLSK-LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515 (768)
T ss_dssp GGGGCTT-CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHhcCCC-CCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCC
Confidence 8888876 888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccc-------------------------------
Q 002897 296 LTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTL------------------------------- 344 (869)
Q Consensus 296 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~------------------------------- 344 (869)
|++|++++|++++.+|..+..+++|+.|++++|++++.+|..++.....
T Consensus 516 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (768)
T 3rgz_A 516 LAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLE 595 (768)
T ss_dssp CCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEE
T ss_pred CCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccc
Confidence 8888888888888888888888888888888888888888776553221
Q ss_pred --------------cceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCcc
Q 002897 345 --------------SLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPS 410 (869)
Q Consensus 345 --------------l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 410 (869)
...++++.|.++|.+|..++.+++|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..
T Consensus 596 ~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~ 675 (768)
T 3rgz_A 596 FQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE 675 (768)
T ss_dssp CTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChH
Confidence 123455667788888888999999999999999999999999999999999999999999999999
Q ss_pred ccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCCCCCCCCCCCCCCC
Q 002897 411 LNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCGGLDEFHLPSCPSK 490 (869)
Q Consensus 411 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~~~~ 490 (869)
|+.+++|+.|||++|+++|.+|..+.++++|++||+++|+++|.+|..+.+..+...++.||+++||.+. +.|+..
T Consensus 676 l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l----~~C~~~ 751 (768)
T 3rgz_A 676 VGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL----PRCDPS 751 (768)
T ss_dssp GGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS----CCCCSC
T ss_pred HhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC----cCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999764 478765
Q ss_pred Ccc
Q 002897 491 RSR 493 (869)
Q Consensus 491 ~~~ 493 (869)
...
T Consensus 752 ~~~ 754 (768)
T 3rgz_A 752 NAD 754 (768)
T ss_dssp C--
T ss_pred ccC
Confidence 443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.3e-57 Score=545.41 Aligned_cols=460 Identities=33% Similarity=0.514 Sum_probs=333.3
Q ss_pred cccCCCcccccCChhh--hhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 2 FDAQNNKLVGDIPVEI--GCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~--~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
||+++|++++.+|... +..+++|++|+|++|.+++..| +..+++|++|+|++|++++.+|. |+++++|++|+|++
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 6788888886666552 3467777777777777775544 36677777777777777765665 77777777777777
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCC-CCCcEEEccCCccccc
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNA-SNLELLELRDNQFIGK 158 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-~~L~~L~L~~N~i~~~ 158 (869)
|++++.+|..|.++++|++|+|++|++.+.+|.. .+++|++|++++|.+++.+|..+... ++|++|+|++|++++.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~ 309 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGA 309 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEEC
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCc
Confidence 7777667777777777777777777776555532 56666677777776666666666554 6677777777766666
Q ss_pred cCcCccCCCCCCEEEccCccCC-CCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccc---------------
Q 002897 159 MSINFNSLKNLSVLILGNNHLG-NRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSN--------------- 222 (869)
Q Consensus 159 ~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~--------------- 222 (869)
.+..|..+++|++|++++|.++ .++. ..+..+++|++|++++|++++.+|..+..+..
T Consensus 310 ~p~~~~~l~~L~~L~L~~n~l~~~ip~------~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 310 VPPFFGSCSLLESLALSSNNFSGELPM------DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCH------HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred cchHHhcCCCccEEECCCCcccCcCCH------HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 6666666666666666666665 3332 13556666666666666666555555554432
Q ss_pred -----------cceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCC
Q 002897 223 -----------TMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLG 291 (869)
Q Consensus 223 -----------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 291 (869)
.|++|++++|.+++.+|..+.++++|+.|++++|++.+..|..++.+++|+.|++++|.+++.+|..+.
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 463 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 256666666666666677777777777777777777777777777777777777777777777777777
Q ss_pred CCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccc
Q 002897 292 NLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQ 371 (869)
Q Consensus 292 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~ 371 (869)
.+++|++|++++|++++.+|..+..+++|++|++++|++++.+|..+... +.++.|+|++|++++.+|..++++++|+.
T Consensus 464 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 542 (768)
T 3rgz_A 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL-ENLAILKLSNNSFSGNIPAELGDCRSLIW 542 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC-TTCCEEECCSSCCEEECCGGGGGCTTCCE
T ss_pred CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCCCE
Confidence 77888888888888877777788888888888888888877777766554 34567888888888888888888888888
Q ss_pred cccccccccccCCccc----------------------------------------------------------------
Q 002897 372 LDISGNRFSGDIPGTL---------------------------------------------------------------- 387 (869)
Q Consensus 372 L~L~~N~l~~~~p~~~---------------------------------------------------------------- 387 (869)
|+|++|.++|.+|..+
T Consensus 543 L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g 622 (768)
T 3rgz_A 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 622 (768)
T ss_dssp EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEE
T ss_pred EECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecc
Confidence 8888888876666543
Q ss_pred ------cCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCC-Cc
Q 002897 388 ------SACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GV 460 (869)
Q Consensus 388 ------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~ 460 (869)
..+++|+.|+|++|+++|.+|.+++.+++|+.|+|++|+++|.+|..+.++++|+.|||++|+++|.+|.. +.
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~ 702 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC
Confidence 33567888888888888888888888888888888888888888888888888888888888888888764 56
Q ss_pred cCCCccccccCCcc
Q 002897 461 FSNKTRFSLSGNGK 474 (869)
Q Consensus 461 ~~~~~~~~~~~n~~ 474 (869)
+..++.+++++|+.
T Consensus 703 l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 703 LTMLTEIDLSNNNL 716 (768)
T ss_dssp CCCCSEEECCSSEE
T ss_pred CCCCCEEECcCCcc
Confidence 77788888888754
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.8e-56 Score=521.90 Aligned_cols=466 Identities=22% Similarity=0.218 Sum_probs=354.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
||+++|+|+ .++...+..+++|++|+|++|+++++.|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|+
T Consensus 38 L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 116 (606)
T 3t6q_A 38 LEFSFNVLP-TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTG 116 (606)
T ss_dssp EECTTCCCS-EECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSC
T ss_pred EEccCCccC-cCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccC
Confidence 455555555 3433333455566666666666555555556666666666666666555555555666666666666666
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCc--EEEccCCcccccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLE--LLELRDNQFIGKM 159 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~--~L~L~~N~i~~~~ 159 (869)
+++..|..|.++++|++|+|++|++. .++...+..+++|++|++++|.+++..+..|..+++|+ .|++++|.+.++.
T Consensus 117 i~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~ 195 (606)
T 3t6q_A 117 ISSIDFIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIE 195 (606)
T ss_dssp CSCGGGSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEEC
T ss_pred cccCCcchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccC
Confidence 55544555555666666666666555 33222233455666666666666555555555555555 5566666555555
Q ss_pred CcCccCC---------------------------------------------------CCCCEEEccCccCCCCCCCCcc
Q 002897 160 SINFNSL---------------------------------------------------KNLSVLILGNNHLGNRAANDLD 188 (869)
Q Consensus 160 ~~~~~~l---------------------------------------------------~~L~~L~l~~n~l~~~~~~~~~ 188 (869)
+..|... .+|+.|++++|.++.++..
T Consensus 196 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~--- 272 (606)
T 3t6q_A 196 PGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN--- 272 (606)
T ss_dssp TTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT---
T ss_pred hhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH---
Confidence 4443321 0345555555555555433
Q ss_pred hhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCc-ccc
Q 002897 189 FVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPP-EIG 267 (869)
Q Consensus 189 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~ 267 (869)
.|..+++|++|++++|+++ .+|..+..+++ |++|++++|.+++..|..+..+++|++|++++|.+.+.+|. .+.
T Consensus 273 ---~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 347 (606)
T 3t6q_A 273 ---TFHCFSGLQELDLTATHLS-ELPSGLVGLST-LKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLE 347 (606)
T ss_dssp ---TTTTCTTCSEEECTTSCCS-CCCSSCCSCTT-CCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTT
T ss_pred ---HhccccCCCEEeccCCccC-CCChhhccccc-CCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhh
Confidence 4788899999999999998 67777888776 99999999999988888899999999999999988755554 588
Q ss_pred CCCCCCEEEccCccccCcC--CCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccccccccc
Q 002897 268 WLKNLQSLYLNSNFLHGYI--PSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLS 345 (869)
Q Consensus 268 ~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l 345 (869)
.+++|++|++++|.+++.. +..+.++++|+.|++++|++.+..|..|..+++|+.|++++|++++..|...+...+.+
T Consensus 348 ~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 427 (606)
T 3t6q_A 348 NLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL 427 (606)
T ss_dssp TCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTC
T ss_pred ccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccC
Confidence 9999999999999998766 78899999999999999999988899999999999999999999988777767777888
Q ss_pred ceecccCCcccCCCcccccCCcccccccccccccccc---CCccccCCCCCcEEEeeCccccCCCCccccccccccEEEc
Q 002897 346 LFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGD---IPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDL 422 (869)
Q Consensus 346 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 422 (869)
+.|++++|.+++..|..+.++++|++|+|++|.+++. .+..+..+++|+.|++++|++++..|..|+.+++|+.|+|
T Consensus 428 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 507 (606)
T 3t6q_A 428 KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDL 507 (606)
T ss_dssp CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEEC
Confidence 9999999999998999999999999999999999862 3467999999999999999999888999999999999999
Q ss_pred cCCcccCCCccccccccccCeeccccccCcccCCCC-CccCCCccccccCCcccCCC
Q 002897 423 SSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GVFSNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 423 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 478 (869)
++|++++..|..+.+++.| .|++++|++++.+|.. ..++.++.+++++||+.|.+
T Consensus 508 s~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 508 SHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 9999999999999999999 9999999999887753 55788899999999999964
No 4
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.2e-54 Score=503.17 Aligned_cols=464 Identities=20% Similarity=0.194 Sum_probs=368.7
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ +||..++ +++++|+|++|+++++.+.+|.++++|++|+|++|+|+++.|.+|+++++|++|+|++|+
T Consensus 16 ~~c~~~~l~-~ip~~~~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 16 YQCMDQKLS-KVPDDIP---SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EECTTSCCS-SCCTTSC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEccCCCcc-cCCCCCC---CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 567777888 7887765 677888888888887777778888888888888888887777778888888888888888
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccce-eccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTG-FLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+++..|.+|+++++|++|+|++|++. .++...++++++|++|++++|.+++ .+|..|+++++|++|++++|+++++.+
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~ 170 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV 170 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECT
T ss_pred ccccChhhcCCcccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecCh
Confidence 88777778888888888888888876 5665567788888888888888775 457778888888888888888777777
Q ss_pred cCccCCCCCC----EEEccCccCCCCCCCCcc------------------------------------------------
Q 002897 161 INFNSLKNLS----VLILGNNHLGNRAANDLD------------------------------------------------ 188 (869)
Q Consensus 161 ~~~~~l~~L~----~L~l~~n~l~~~~~~~~~------------------------------------------------ 188 (869)
..|..+++|+ +|++++|.++.++...+.
T Consensus 171 ~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 171 NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 7666655544 566666666655443110
Q ss_pred --------------------------hhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccc
Q 002897 189 --------------------------FVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGL 242 (869)
Q Consensus 189 --------------------------~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~ 242 (869)
....+..+++|+.|++++|.+. .+| .+..+.+ |+.|++++|.+ +.+| .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~-L~~L~l~~n~l-~~lp-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKHFK-WQSLSIIRCQL-KQFP-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTTCC-CSEEEEESCCC-SSCC-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccch-hhh-hcccccc-CCEEEcccccC-cccc-cC
Confidence 0011344556666666666665 333 4555554 77788888877 3666 44
Q ss_pred cCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCc--CCCCCCCCccccceecccccccccCCcCccCcccc
Q 002897 243 GNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGY--IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSL 320 (869)
Q Consensus 243 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 320 (869)
.+++|+.|++++|...+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.++ .+|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCC
Confidence 7788888888888554333 567889999999999998866 3777889999999999999998 467899999999
Q ss_pred ceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccc-cCCccccCCCCCcEEEee
Q 002897 321 IMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSG-DIPGTLSACTSLEYVKMQ 399 (869)
Q Consensus 321 ~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~l~ 399 (869)
+.|++++|++.+..|...+.....++.|++++|.+++..|..+.++++|++|++++|.+++ .+|..+..+++|+.|+++
T Consensus 402 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls 481 (606)
T 3vq2_A 402 QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLS 481 (606)
T ss_dssp CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECT
T ss_pred CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECC
Confidence 9999999999977775666667788899999999999999999999999999999999997 479999999999999999
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccC-CCccccccCCcccCCC
Q 002897 400 DNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFS-NKTRFSLSGNGKLCGG 478 (869)
Q Consensus 400 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~ 478 (869)
+|++++..|..|+.+++|+.|+|++|++++..|..+..+++|+.|++++|+++..++....+. .++.+++.+|++.|++
T Consensus 482 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 482 KCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCC
Confidence 999998889999999999999999999999889999999999999999999997665555554 5899999999999975
Q ss_pred C
Q 002897 479 L 479 (869)
Q Consensus 479 ~ 479 (869)
.
T Consensus 562 ~ 562 (606)
T 3vq2_A 562 E 562 (606)
T ss_dssp T
T ss_pred c
Confidence 4
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.1e-53 Score=501.94 Aligned_cols=468 Identities=23% Similarity=0.249 Sum_probs=248.0
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
||+++|+++ .+|...+..+++|++|+|++|.+++..|.+|+++++|++|+|++|+++.+.+.+|+++++|++|+|++|+
T Consensus 30 L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 108 (680)
T 1ziw_A 30 LNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNS 108 (680)
T ss_dssp EECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSC
T ss_pred EECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCc
Confidence 455555555 4444444455555555555555555555555555555555555555554333445555555555555555
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceecccccc--CCCCCcEEEccCCcccccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLS--NASNLELLELRDNQFIGKM 159 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~--~l~~L~~L~L~~N~i~~~~ 159 (869)
++++.|..|+++++|++|+|++|.+. .++...+.++++|++|++++|.+++..+..+. .+++|++|++++|+++++.
T Consensus 109 l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~ 187 (680)
T 1ziw_A 109 IQKIKNNPFVKQKNLITLDLSHNGLS-STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFS 187 (680)
T ss_dssp CCCCCSCTTTTCTTCCEEECCSSCCS-CCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBC
T ss_pred cCccChhHccccCCCCEEECCCCccc-ccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccC
Confidence 55444455555555555555555554 23333445555555555555555544433322 2344444444444444433
Q ss_pred CcCccC---------------------------------------------------CC--CCCEEEccCccCCCCCCCC
Q 002897 160 SINFNS---------------------------------------------------LK--NLSVLILGNNHLGNRAAND 186 (869)
Q Consensus 160 ~~~~~~---------------------------------------------------l~--~L~~L~l~~n~l~~~~~~~ 186 (869)
+..|.. ++ +|++|++++|.++.++..
T Consensus 188 ~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~- 266 (680)
T 1ziw_A 188 PGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGND- 266 (680)
T ss_dssp TTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTT-
T ss_pred hhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcc-
Confidence 332222 21 133333333333332221
Q ss_pred cchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccc-----cCC----ccccCCCCCCeeecccCc
Q 002897 187 LDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSG-----TIP----PGLGNLVHLNSIAMEGNQ 257 (869)
Q Consensus 187 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~-----~~~----~~~~~l~~L~~L~l~~n~ 257 (869)
.|..+++|++|++++|++++..|..+..+.+ |+.|++++|...+ .+| ..|..+++|++|++++|+
T Consensus 267 -----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~ 340 (680)
T 1ziw_A 267 -----SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN-VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 340 (680)
T ss_dssp -----TTTTCTTCCEEECCSCCBSEECTTTTTTCTT-CCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCC
T ss_pred -----cccCcccccEeeCCCCccCccChhhhcCCCC-ccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCc
Confidence 2344444444444444444333333322221 2222222111110 000 022333334444444444
Q ss_pred ceecCCccccCCCCCCEEEcc----------------------------CccccCcCCCCCCCCccccceeccccccccc
Q 002897 258 LIGTVPPEIGWLKNLQSLYLN----------------------------SNFLHGYIPSSLGNLTMLTLLALEINNLQGK 309 (869)
Q Consensus 258 l~~~~~~~~~~l~~L~~L~L~----------------------------~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 309 (869)
+.+..+..|..+++|++|+++ +|++++..|..|..+++|+.|++++|++++.
T Consensus 341 l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 420 (680)
T 1ziw_A 341 IPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQE 420 (680)
T ss_dssp BCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEE
T ss_pred cCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccc
Confidence 444333334433333333332 2333333344444455555555555554433
Q ss_pred CC-cCccCccccceeeccCcccCCC--------------------------CCccccccccccceecccCCcccCCCccc
Q 002897 310 IP-SSLGNCTSLIMLTLSKNKLDGV--------------------------LPPQILSVTTLSLFLNLSDNLLSGSLPSE 362 (869)
Q Consensus 310 ~~-~~~~~l~~L~~L~l~~N~l~~~--------------------------~~~~~~~~~~~l~~L~l~~N~l~~~~p~~ 362 (869)
+| ..|.++++|++|++++|++++. .|..+ .....++.|++++|++++..+..
T Consensus 421 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~i~~~~ 499 (680)
T 1ziw_A 421 LTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPF-QPLRNLTILDLSNNNIANINDDM 499 (680)
T ss_dssp CCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTT-TTCTTCCEEECCSSCCCCCCTTT
T ss_pred cCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccc-ccCCCCCEEECCCCCCCcCChhh
Confidence 32 3444444444444444443321 22222 22344567777777777766667
Q ss_pred ccCCccccccccccccccccCC--------ccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccc
Q 002897 363 IGNLKNLVQLDISGNRFSGDIP--------GTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKY 434 (869)
Q Consensus 363 ~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 434 (869)
|.++++|++|+|++|.+++..+ ..|.++++|+.|++++|+++...+..|..+++|+.|+|++|++++..+..
T Consensus 500 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~ 579 (680)
T 1ziw_A 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASV 579 (680)
T ss_dssp TTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred hccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhH
Confidence 7777888888888887775321 23677788888888888887444456888888888888888888766677
Q ss_pred cccccccCeeccccccCcccCCCC-C-ccCCCccccccCCcccCCCC
Q 002897 435 LENLSFLEYLNLSYNHFEGEVPKK-G-VFSNKTRFSLSGNGKLCGGL 479 (869)
Q Consensus 435 ~~~l~~L~~l~l~~N~l~~~~~~~-~-~~~~~~~~~~~~n~~~c~~~ 479 (869)
|..+++|+.|++++|++++.++.. + .+++++.+++++|||.|++.
T Consensus 580 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 580 FNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred hCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 788888899999999888776543 2 46788999999999999764
No 6
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-53 Score=513.73 Aligned_cols=463 Identities=20% Similarity=0.210 Sum_probs=347.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccC-ccCCccccCCCCCCEEeCcCc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLG-GKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n 80 (869)
.|+++++++ .||. + .++|++|+|++|.|+++.|.+|.++++|++|+|++|.+. .+.|.+|+++++|++|+|++|
T Consensus 9 ~dcs~~~L~-~vP~-l---p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ-V---LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEESCCCSS-CCCS-S---CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEccCCCCC-CCCC-C---CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 577888899 8887 3 478999999999998888888999999999999998544 344888999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCc-hhhcCCcchhhhhccccccceecc-ccccCCCCCcEEEccCCccccc
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPF-DMVANLPNLRKFVAAKNNLTGFLP-ISLSNASNLELLELRDNQFIGK 158 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N~i~~~ 158 (869)
.|.+..|.+|.++++|++|+|++|.+.+.+|. ..|.++++|++|++++|.+++..+ ..|+++++|++|+|++|.+.++
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 99888888999999999999999998865543 358889999999999999887654 5788999999999999998888
Q ss_pred cCcCccCC--CCCCEEEccCccCCCCCCCCcchhhhccCCC------CCcEEEccCCCCCCCCChhhhhc----------
Q 002897 159 MSINFNSL--KNLSVLILGNNHLGNRAANDLDFVTVLANCS------KLENLGLYDNQFGGLLPHSLANL---------- 220 (869)
Q Consensus 159 ~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~------~L~~L~L~~n~l~~~~~~~~~~l---------- 220 (869)
.+..|..+ ++|+.|++++|.+...... .+..++ +|++|++++|++++..+..+...
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~------~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~ 237 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSV------DWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLI 237 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCC------CCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEE
T ss_pred CHHHcccccCCccceEECCCCcccccccc------chhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccccccee
Confidence 88887777 7788888888877664332 122222 37777777776665555444322
Q ss_pred ---------------------------cccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCC
Q 002897 221 ---------------------------SNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQ 273 (869)
Q Consensus 221 ---------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 273 (869)
...|+.|++++|.+.+..+..|..+++|+.|+|++|++.+..|..|..+++|+
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp CCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred cccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 12477777777777766677777777777777777777777777777777777
Q ss_pred EEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCC------------------CC
Q 002897 274 SLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGV------------------LP 335 (869)
Q Consensus 274 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~------------------~~ 335 (869)
+|+|++|.+++..|..|.++++|+.|++++|++....+..|..+++|+.|++++|.+++. +|
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~ 397 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLP 397 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCC
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCccccc
Confidence 777777777766677777777777777777777766666677777777777777776532 11
Q ss_pred cc---------------------ccccccccceecccCCcccCCCcc-cccCCcccccccccccccc-----ccCCcccc
Q 002897 336 PQ---------------------ILSVTTLSLFLNLSDNLLSGSLPS-EIGNLKNLVQLDISGNRFS-----GDIPGTLS 388 (869)
Q Consensus 336 ~~---------------------~~~~~~~l~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~ 388 (869)
.. .....+.++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.
T Consensus 398 ~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 477 (844)
T 3j0a_A 398 KINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFE 477 (844)
T ss_dssp CCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSS
T ss_pred ccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhc
Confidence 11 011234455666777776643332 3455677777777777775 33445678
Q ss_pred CCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCcccc
Q 002897 389 ACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFS 468 (869)
Q Consensus 389 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~ 468 (869)
++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|.. +..+..++
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~ 553 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLD 553 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEE
Confidence 888899999999999888888888999999999999999877666665 78999999999999887754 66889999
Q ss_pred ccCCcccCCCC
Q 002897 469 LSGNGKLCGGL 479 (869)
Q Consensus 469 ~~~n~~~c~~~ 479 (869)
+++||+.|++.
T Consensus 554 l~~Np~~C~c~ 564 (844)
T 3j0a_A 554 ITHNKFICECE 564 (844)
T ss_dssp EEEECCCCSSS
T ss_pred ecCCCcccccc
Confidence 99999999764
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.2e-52 Score=490.08 Aligned_cols=446 Identities=23% Similarity=0.233 Sum_probs=401.2
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+||+++|++++ ++...+..+++|++|+|++|++++..|.+|+++++|++|+|++|+|++..|..|+++++|++|+|++|
T Consensus 61 ~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n 139 (606)
T 3t6q_A 61 FLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSN 139 (606)
T ss_dssp EEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSS
T ss_pred EEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCC
Confidence 47999999994 54444568999999999999999889999999999999999999999877889999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchh--hhhccccccceeccccccCC----------------
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLR--KFVAAKNNLTGFLPISLSNA---------------- 142 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~--~L~l~~n~i~~~~~~~l~~l---------------- 142 (869)
++.+..+..+.++++|++|+|++|++. .++...|..+++|+ .|++++|.+++..|..|...
T Consensus 140 ~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~ 218 (606)
T 3t6q_A 140 HISSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVI 218 (606)
T ss_dssp CCCCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHH
T ss_pred cccccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHH
Confidence 999766566667999999999999998 67667899999999 89999999998877665432
Q ss_pred -----------------------------------CCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCc
Q 002897 143 -----------------------------------SNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDL 187 (869)
Q Consensus 143 -----------------------------------~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 187 (869)
.+|+.|++++|.++++.+..|..+++|++|++++|.++.++.
T Consensus 219 ~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~--- 295 (606)
T 3t6q_A 219 FKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSELPS--- 295 (606)
T ss_dssp HHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCS---
T ss_pred hhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCCCh---
Confidence 178899999999999999999999999999999999998765
Q ss_pred chhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc-cccCCCCCCeeecccCcceecC--Cc
Q 002897 188 DFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP-GLGNLVHLNSIAMEGNQLIGTV--PP 264 (869)
Q Consensus 188 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~--~~ 264 (869)
.+..+++|++|++++|++++..|..+..+++ |++|++++|.+.+.+|. .+..+++|++|++++|.+.+.. +.
T Consensus 296 ----~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 370 (606)
T 3t6q_A 296 ----GLVGLSTLKKLVLSANKFENLCQISASNFPS-LTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNL 370 (606)
T ss_dssp ----SCCSCTTCCEEECTTCCCSBGGGGCGGGCTT-CSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTT
T ss_pred ----hhcccccCCEEECccCCcCcCchhhhhccCc-CCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcch
Confidence 4889999999999999999888889999986 99999999999866655 4999999999999999998776 78
Q ss_pred cccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCc-CccCccccceeeccCcccCCCCCcccccccc
Q 002897 265 EIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPS-SLGNCTSLIMLTLSKNKLDGVLPPQILSVTT 343 (869)
Q Consensus 265 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 343 (869)
.+..+++|++|++++|.+.+..|..|.++++|+.|++++|++.+..+. .+..+++|+.|++++|++++..|..+ ...+
T Consensus 371 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~ 449 (606)
T 3t6q_A 371 QLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLF-DGLP 449 (606)
T ss_dssp TTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTT-TTCT
T ss_pred hcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHH-hCCC
Confidence 899999999999999999999999999999999999999999976654 49999999999999999986655544 4456
Q ss_pred ccceecccCCcccC---CCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEE
Q 002897 344 LSLFLNLSDNLLSG---SLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVL 420 (869)
Q Consensus 344 ~l~~L~l~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 420 (869)
.++.|++++|++++ ..+..+..+++|++|+|++|.+++..|..|.++++|+.|++++|++++..|..+..++.| .|
T Consensus 450 ~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L 528 (606)
T 3t6q_A 450 ALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YL 528 (606)
T ss_dssp TCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EE
T ss_pred CCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EE
Confidence 67899999999986 234679999999999999999998889999999999999999999999999999999999 99
Q ss_pred EccCCcccCCCccccccccccCeeccccccCcccCCCC
Q 002897 421 DLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 421 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 458 (869)
+|++|++++.+|..+..+++|+.|++++|++.+.++..
T Consensus 529 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 529 NLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp ECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred ECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 99999999999999999999999999999999987643
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.9e-51 Score=490.12 Aligned_cols=469 Identities=20% Similarity=0.203 Sum_probs=367.1
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ +||.++. +++++|+|++|.++++.+..|.++++|++|+|++|++++..|++|+++++|++|+|++|+
T Consensus 9 ~~cs~~~L~-~ip~~~~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 84 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP---TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNE 84 (680)
T ss_dssp EECCSSCCS-SCCSCSC---TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSC
T ss_pred eECCCCCcc-ccccccC---CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCc
Confidence 689999999 8998875 799999999999998888889999999999999999999999999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
++++.+.+|.++++|++|+|++|++. .++...|.++++|++|++++|.+++..+..+.++++|++|++++|.++++.+.
T Consensus 85 l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 85 LSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred cCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99776678999999999999999998 77778899999999999999999999999999999999999999999988777
Q ss_pred Ccc--CCCCCCEEEccCccCCCCCCCCcchhhhcc---------------------CCCCCcEEEccCCCCCCCCChhhh
Q 002897 162 NFN--SLKNLSVLILGNNHLGNRAANDLDFVTVLA---------------------NCSKLENLGLYDNQFGGLLPHSLA 218 (869)
Q Consensus 162 ~~~--~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~---------------------~l~~L~~L~L~~n~l~~~~~~~~~ 218 (869)
.|. .+++|++|++++|.++.++...+.....+. ..++|++|++++|++++..|..+.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 568999999999999887765322111110 125667777777777766666666
Q ss_pred hccc-cceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCcc--------------------------------
Q 002897 219 NLSN-TMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPE-------------------------------- 265 (869)
Q Consensus 219 ~l~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------------------- 265 (869)
.+.. .|+.|++++|.+++..|..|..+++|++|++++|++.+..|..
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 6542 3777777777777666677777777777777777776655543
Q ss_pred -ccCCCCCCEEEccCccccCcCCCCCCCCccccceecccc----------------------------cccccCCcCccC
Q 002897 266 -IGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEIN----------------------------NLQGKIPSSLGN 316 (869)
Q Consensus 266 -~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n----------------------------~l~~~~~~~~~~ 316 (869)
|..+++|++|++++|.+++..+..|.++++|++|++++| ++++..|.+|..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 445666777777777777777777777666666655443 444455667777
Q ss_pred ccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccccccccccc--ccCCccccCCCCCc
Q 002897 317 CTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFS--GDIPGTLSACTSLE 394 (869)
Q Consensus 317 l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~ 394 (869)
+++|+.|++++|++++.+|...+.....++.|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 7777777777777776666555555666677777777777666667777777777777777765 45778888888999
Q ss_pred EEEeeCccccCCCCccccccccccEEEccCCcccCCCc--------cccccccccCeeccccccCcccCCC-CCccCCCc
Q 002897 395 YVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIP--------KYLENLSFLEYLNLSYNHFEGEVPK-KGVFSNKT 465 (869)
Q Consensus 395 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~ 465 (869)
.|++++|++++..+..|..+++|+.|+|++|++++..+ ..+.++++|+.|++++|+++..++. ...+..++
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 99999999887777778888889999999998875422 2367888888888888888855443 35677788
Q ss_pred cccccCCccc
Q 002897 466 RFSLSGNGKL 475 (869)
Q Consensus 466 ~~~~~~n~~~ 475 (869)
.+++++|.-.
T Consensus 564 ~L~Ls~N~l~ 573 (680)
T 1ziw_A 564 IIDLGLNNLN 573 (680)
T ss_dssp EEECCSSCCC
T ss_pred eeECCCCCCC
Confidence 8888887543
No 9
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1e-52 Score=439.53 Aligned_cols=264 Identities=27% Similarity=0.442 Sum_probs=206.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|++. ..||||+++.. .....+.|.+|++++++++|||||++++++.. +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 357888999999999999999874 35999998643 34456789999999999999999999998753 45
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++|||||++|+|.++++.... ++++.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred EEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeecc
Confidence 7999999999999999987543 399999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC---CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG---SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
+|+....... ........||+.|||||++.+ ++|+.++|||||||++|||+||+.||..............
T Consensus 178 la~~~~~~~~------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~ 251 (307)
T 3omv_A 178 LATVKSRWSG------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251 (307)
T ss_dssp SCBC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH
T ss_pred CceecccCCc------ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHh
Confidence 9987644321 122345679999999999853 4689999999999999999999999975322111111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
.... .|.. ...+.+++..+.+++.+||+.||++||||.||++.|+.++..++
T Consensus 252 ~~~~--------~p~~---------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 252 RGYA--------SPDL---------------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp TTCC--------CCCS---------------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cCCC--------CCCc---------------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 1110 0100 01112456678899999999999999999999999998877654
No 10
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.4e-53 Score=442.22 Aligned_cols=269 Identities=24% Similarity=0.399 Sum_probs=216.3
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|.+.+.||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----
Confidence 46888899999999999999874 35889999999877666778899999999999999999999998653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCC-------cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNND-------KLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
+..++|||||++|+|.++++.... ......++|.+++.|+.|||+||+|||++ +||||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 678999999999999999987531 11123599999999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~ 780 (869)
+.+||+|||+|+....... ........||+.|||||++.+..|+.++|||||||++|||+| |+.||.....
T Consensus 165 ~~~Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-- 236 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-- 236 (299)
T ss_dssp GCEEECCCSCHHHHTGGGC------EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--
T ss_pred CcEEECCcccceecCCCCc------eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 9999999999986543321 112234568999999999999999999999999999999999 8999975322
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.+....+..... .+.++.++.++.+++.+||+.||++|||++||.+.|+.+.++
T Consensus 237 ---~~~~~~i~~~~~-----------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 237 ---NEVIECITQGRV-----------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ---HHHHHHHHHTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCC-----------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 122211111100 011124566788999999999999999999999999998876
Q ss_pred hhcc
Q 002897 861 FVSM 864 (869)
Q Consensus 861 ~~~~ 864 (869)
.+..
T Consensus 291 ~p~~ 294 (299)
T 4asz_A 291 SPVY 294 (299)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 5443
No 11
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.9e-52 Score=441.97 Aligned_cols=266 Identities=26% Similarity=0.418 Sum_probs=209.7
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|++++++++|||||+++|+|.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG----- 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 46777889999999999999874 36889999999877767778899999999999999999999998653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcc---------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKL---------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 699 (869)
...++|||||++|+|.++++...... ...+++|.+++.|+.|||+||+|||++ +||||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 67899999999999999998754321 124599999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCcc
Q 002897 700 HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFH 778 (869)
Q Consensus 700 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~ 778 (869)
+++.+||+|||+|+....... ........||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY------YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred CCCcEEEcccccceeccCCCc------ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999987644321 122344679999999999999999999999999999999999 8999975322
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
.+....+.... ..+.++.+++++.+++.+||+.||++||||+||++.|+.+.
T Consensus 267 -----~~~~~~i~~g~-----------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 267 -----TEAIDCITQGR-----------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp -----HHHHHHHHHTC-----------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHHHcCC-----------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11111111100 01111245667889999999999999999999999999988
Q ss_pred Hhh
Q 002897 859 EAF 861 (869)
Q Consensus 859 ~~~ 861 (869)
++-
T Consensus 319 ~~p 321 (329)
T 4aoj_A 319 QAP 321 (329)
T ss_dssp HSC
T ss_pred hCC
Confidence 764
No 12
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.5e-52 Score=438.11 Aligned_cols=250 Identities=22% Similarity=0.334 Sum_probs=209.5
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
..|++.++||+|+||+||+|+++.+|+.||||+++.......+.+.+|++++++++|||||++++++.+. +..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEEE
Confidence 4688999999999999999999999999999999876666667789999999999999999999997654 78999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|||||++|+|.+++.... +++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~~-------l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 999999999999997643 89999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.+.... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+....+...
T Consensus 219 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~ 285 (346)
T 4fih_A 219 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDN 285 (346)
T ss_dssp ECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHS
T ss_pred ecCCCC--------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcC
Confidence 765432 233456899999999999999999999999999999999999999975321 1111111000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..+. ......+++++.+++.+||+.||++|||++|+++
T Consensus 286 -----~~~~----------------~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 286 -----LPPR----------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp -----SCCC----------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCCC----------------CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 0011234456889999999999999999999986
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=5.1e-51 Score=479.85 Aligned_cols=439 Identities=19% Similarity=0.150 Sum_probs=378.9
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
.||+++|+++ .+|...+..+++|++|+|++|.++++.|.+|.++++|++|+|++|++++..|++|+++++|++|+|++|
T Consensus 36 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 36 NIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp EEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred EEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 3789999999 677766678999999999999999888999999999999999999999888999999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcc-cCCchhhcCCcchhhhhccccccceeccccccCCCCCc----EEEccCCcc
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHG-SLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLE----LLELRDNQF 155 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~----~L~L~~N~i 155 (869)
++++..+..|+++++|++|+|++|++.+ .+| ..|+++++|++|++++|++++..+..|..+++|+ +|++++|.+
T Consensus 115 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l 193 (606)
T 3vq2_A 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLP-AYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI 193 (606)
T ss_dssp CCCCSSSSCCTTCTTCCEEECCSSCCCCCCCC-GGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCC
T ss_pred ccccccccccCCCCCCCEEeCCCCcccceech-HhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCc
Confidence 9998777889999999999999999974 456 5689999999999999999988887777666554 677777777
Q ss_pred ccccCcCcc-----------------------------------------------------------------------
Q 002897 156 IGKMSINFN----------------------------------------------------------------------- 164 (869)
Q Consensus 156 ~~~~~~~~~----------------------------------------------------------------------- 164 (869)
+++.+..|.
T Consensus 194 ~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~ 273 (606)
T 3vq2_A 194 DFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTND 273 (606)
T ss_dssp CEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTT
T ss_pred ceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecccccc
Confidence 655554443
Q ss_pred ---------CCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccc
Q 002897 165 ---------SLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS 235 (869)
Q Consensus 165 ---------~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~ 235 (869)
.+++|+.|++++|.+..++ .+..+++|++|++++|++ +.+| .+ .++. |+.|++++|...
T Consensus 274 ~~~~~~~~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~-L~~L~l~~n~~~ 341 (606)
T 3vq2_A 274 FSDDIVKFHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPF-LKSLTLTMNKGS 341 (606)
T ss_dssp CCGGGGSCGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCC-CC-CCSS-CCEEEEESCSSC
T ss_pred ccccccccccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-cccc-cC-CCCc-cceeeccCCcCc
Confidence 3445555555555554443 478899999999999999 5777 44 6665 999999999655
Q ss_pred ccCCccccCCCCCCeeecccCcceec--CCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCC-c
Q 002897 236 GTIPPGLGNLVHLNSIAMEGNQLIGT--VPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIP-S 312 (869)
Q Consensus 236 ~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~ 312 (869)
+.. .+..+++|++|++++|++.+. .|..+..+++|++|++++|.+++ .|..+..+++|+.|++++|++.+..+ .
T Consensus 342 ~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 418 (606)
T 3vq2_A 342 ISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFS 418 (606)
T ss_dssp EEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTT
T ss_pred cch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChh
Confidence 443 678999999999999999876 48889999999999999999985 66889999999999999999998777 6
Q ss_pred CccCccccceeeccCcccCCCCCccccccccccceecccCCcccC-CCcccccCCccccccccccccccccCCccccCCC
Q 002897 313 SLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSG-SLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACT 391 (869)
Q Consensus 313 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 391 (869)
.+..+++|+.|++++|++++..|..+.. ...++.|++++|.+++ .+|..++.+++|+.|+|++|.+++..|..|.+++
T Consensus 419 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 497 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTKIDFDGIFLG-LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497 (606)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhccccCCEEECcCCCCCccchhhhcC-CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc
Confidence 8999999999999999999766665544 4567899999999997 4799999999999999999999998999999999
Q ss_pred CCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCcccccccc-ccCeeccccccCcccCCCC
Q 002897 392 SLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLS-FLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 392 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~l~~N~l~~~~~~~ 458 (869)
+|+.|++++|++++..|..|+.+++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++.+.++..
T Consensus 498 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 498 RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999999999999888999999999999999999999 7788899997 5999999999999988754
No 14
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.5e-51 Score=434.61 Aligned_cols=262 Identities=24% Similarity=0.282 Sum_probs=210.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+++.++|||||++++++.+. +..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~-----~~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREG-----PWVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEEC-----CEEE
Confidence 3567788899999999999999999999999999965322 24799999999999999999997653 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 711 (869)
+|||||++|+|.++++... .+++.++..++.||+.||+|||++ +||||||||+|||++.+| ++||+|||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 9999999999999998754 399999999999999999999999 999999999999999998 699999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
|+.+........ .......+||+.|||||++.+..|+.++||||+||++|||+||+.||......... ........
T Consensus 198 a~~~~~~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~-~~i~~~~~ 273 (336)
T 4g3f_A 198 ALCLQPDGLGKS---LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLC-LKIASEPP 273 (336)
T ss_dssp CEEC---------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCH-HHHHHSCC
T ss_pred CeEccCCCcccc---eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH-HHHHcCCC
Confidence 987755432111 01233467999999999999999999999999999999999999999764433221 11111100
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
+ . ...++.+++.+.+++.+||+.||++|||+.|+++.|..+.+...
T Consensus 274 ~--~-----------------------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 274 P--I-----------------------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp G--G-----------------------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred C--c-----------------------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 0 0 00112345678899999999999999999999999998877654
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-51 Score=475.53 Aligned_cols=456 Identities=23% Similarity=0.237 Sum_probs=393.1
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|.++.+++ +||..+. .++++|+|++|+++++.+.+|.++++|++|+|++|+|+++.|++|+++++|++|+|++|+
T Consensus 12 ~~c~~~~l~-~ip~~l~---~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 87 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (570)
T ss_dssp EECCSSCCS-SCCSSSC---SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEeCCCCcc-ccCCCcc---ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCc
Confidence 467888999 8998775 689999999999998888899999999999999999998888999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+++..|.+|.++++|++|++++|++. .++...++++++|++|++++|.+++. +|..|.++++|++|++++|+++++.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 88 IQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred CCccCHhhhcCccccccccccccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 99888899999999999999999998 77766789999999999999999873 68899999999999999999998888
Q ss_pred cCccCCCCC----CEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCC-----------------------------
Q 002897 161 INFNSLKNL----SVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDN----------------------------- 207 (869)
Q Consensus 161 ~~~~~l~~L----~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n----------------------------- 207 (869)
..|..+++| +.|++++|.++.++.. .+..+ +|++|++++|
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~------~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~ 239 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPG------AFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN 239 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTT------TTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC
T ss_pred HHccchhccchhhhhcccCCCCceecCHH------HhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC
Confidence 888888888 8999999999887764 34433 6777777766
Q ss_pred -----------------------------CCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcc
Q 002897 208 -----------------------------QFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQL 258 (869)
Q Consensus 208 -----------------------------~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 258 (869)
.+.+..|..+..+++ |+.|++++|.++ .+|..+..+ +|++|++++|.+
T Consensus 240 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~-L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~ 316 (570)
T 2z63_A 240 EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTN-VSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKF 316 (570)
T ss_dssp CSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTT-CSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBC
T ss_pred chhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCc-ccEEEecCccch-hhhhhhccC-CccEEeeccCcc
Confidence 334445566666665 888888888888 577888888 888889988888
Q ss_pred eecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccC--CcCccCccccceeeccCcccCCCCCc
Q 002897 259 IGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKI--PSSLGNCTSLIMLTLSKNKLDGVLPP 336 (869)
Q Consensus 259 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~N~l~~~~~~ 336 (869)
. .+|. ..+++|+.|++++|.+.+..+. ..+++|+.|++++|++++.. +..+..+++|+.|++++|++++ +|+
T Consensus 317 ~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~ 390 (570)
T 2z63_A 317 G-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSS 390 (570)
T ss_dssp S-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEE
T ss_pred c-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-ccc
Confidence 7 4554 4678889999999988766554 78899999999999998543 6788899999999999999984 444
Q ss_pred cccccccccceecccCCcccCCCc-ccccCCccccccccccccccccCCccccCCCCCcEEEeeCcccc-CCCCcccccc
Q 002897 337 QILSVTTLSLFLNLSDNLLSGSLP-SEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFS-GSIPPSLNFL 414 (869)
Q Consensus 337 ~~~~~~~~l~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l 414 (869)
. +...+.++.|++++|.+++..| ..+.++++|++|++++|.+++..|..+.++++|++|++++|+++ +.+|..+..+
T Consensus 391 ~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l 469 (570)
T 2z63_A 391 N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTEL 469 (570)
T ss_dssp E-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTC
T ss_pred c-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcc
Confidence 4 4556677899999999997766 57899999999999999999889999999999999999999998 5789999999
Q ss_pred ccccEEEccCCcccCCCccccccccccCeeccccccCcccCCC-CCccCCCccccccCCcccCCCC
Q 002897 415 KSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPK-KGVFSNKTRFSLSGNGKLCGGL 479 (869)
Q Consensus 415 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 479 (869)
++|+.|+|++|++++..|..+..+++|++|++++|++++.++. ...++.++.+++++|++.|.++
T Consensus 470 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 470 RNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999999999999988899999999999999999999998775 3567889999999999998643
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-52 Score=441.19 Aligned_cols=251 Identities=18% Similarity=0.298 Sum_probs=202.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||+||+|++..+|+.||||+++.. .....+.+.+|++++++++|||||++++++.+. +..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-----~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN-----GSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-----CEE
Confidence 5899999999999999999999999999999999643 334567899999999999999999999997653 789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
|+|||||++|+|.+++...+. ..+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~----~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKG----VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 999999999999999976543 2478999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
|+...... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+.
T Consensus 172 a~~~~~~~--------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~i~ 238 (350)
T 4b9d_A 172 ARVLNSTV--------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-----KNLVLKII 238 (350)
T ss_dssp ESCCCHHH--------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHH
T ss_pred ceeecCCc--------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHH
Confidence 98654321 122345799999999999999999999999999999999999999975321 12221111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... ....++.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~-----------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 239 SGSFPP-----------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HTCCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCCC-----------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111000 01123456789999999999999999999986
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-51 Score=434.06 Aligned_cols=262 Identities=23% Similarity=0.341 Sum_probs=209.6
Q ss_pred cCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
+++++.++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|...
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD---- 101 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC----
Confidence 34566789999999999999863 367899999996443 33457899999999999999999999998653
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
+..++|||||++|+|.+++....... ....++|.++..|+.|||+||+|||++ +||||||||+|||
T Consensus 102 -~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 102 -QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp -SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred -CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 67899999999999999997653211 123589999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSM 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~ 776 (869)
+++++.+||+|||+|+...... .........||+.|||||++.++.|+.++|||||||++|||+| |+.||...
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAAD------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGG------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred ECCCCCEEECCcccceeccCCC------ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999998654322 1123345679999999999999999999999999999999998 89999753
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
.. .+....+.... ..+.+++++..+.+++.+||+.||++||||+||++.|++
T Consensus 252 ~~-----~~~~~~i~~~~-----------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 252 SN-----QDVVEMIRNRQ-----------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CH-----HHHHHHHHTTC-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CH-----HHHHHHHHcCC-----------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22 12222211110 111223466778999999999999999999999999975
Q ss_pred H
Q 002897 857 A 857 (869)
Q Consensus 857 ~ 857 (869)
.
T Consensus 304 ~ 304 (308)
T 4gt4_A 304 W 304 (308)
T ss_dssp S
T ss_pred c
Confidence 3
No 18
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.3e-51 Score=424.18 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=200.3
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
++.++||+|+||+||+|.+..+++.||+|++... .....+.+.+|++++++++|||||++++++.+. ..+....++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEEE
Confidence 5567899999999999999999999999999643 334457899999999999999999999997653 2334678999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDFGLAK 713 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 713 (869)
||||++|+|.+++++.. .+++..+..++.||+.||+|||++ +++||||||||+|||++. +|.+||+|||+|+
T Consensus 108 mEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999998754 389999999999999999999998 123999999999999984 7899999999997
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ...........
T Consensus 181 ~~~~----------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~ 245 (290)
T 3fpq_A 181 LKRA----------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSG 245 (290)
T ss_dssp GCCT----------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTT
T ss_pred eCCC----------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcC
Confidence 5432 22334679999999999875 699999999999999999999999964322 11121111111
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... .+..+++++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~----------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 VKPAS----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCCGG----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCC----------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000 00112345789999999999999999999975
No 19
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-50 Score=487.34 Aligned_cols=440 Identities=20% Similarity=0.172 Sum_probs=369.0
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCc-cCCcccccCCCCcEEECcC
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSG-FIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~Ls~ 103 (869)
+..+.++++++ .+|. -.++|++|+|++|+|+++.|..|+++++|++|+|++|.+.+ +.|.+|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 57888999999 6665 46899999999999999999999999999999999995544 4488999999999999999
Q ss_pred CcCcccCCchhhcCCcchhhhhccccccceecccc--ccCCCCCcEEEccCCccccccC-cCccCCCCCCEEEccCccCC
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPIS--LSNASNLELLELRDNQFIGKMS-INFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~--l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~ 180 (869)
|.+. .++.+.|.++++|++|+|++|.+++..+.. |.++++|++|+|++|.+.+..+ ..|.++++|++|+|++|.++
T Consensus 83 N~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 83 SKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CCCC-EECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred CcCc-ccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 9998 555578999999999999999999766654 9999999999999999988765 57999999999999999998
Q ss_pred CCCCCCcchhhhccCC--CCCcEEEccCCCCCCCCChhhhhccc-----cceEEEecCCcccccCCccccC---------
Q 002897 181 NRAANDLDFVTVLANC--SKLENLGLYDNQFGGLLPHSLANLSN-----TMTTIDIGGNYFSGTIPPGLGN--------- 244 (869)
Q Consensus 181 ~~~~~~~~~~~~l~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~-----~L~~L~l~~n~l~~~~~~~~~~--------- 244 (869)
.+... .+..+ ++|+.|++++|.+.+..|..+..+.+ .|+.|++++|.+++..+..+..
T Consensus 162 ~~~~~------~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~ 235 (844)
T 3j0a_A 162 LVCEH------ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFS 235 (844)
T ss_dssp CCCSG------GGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSE
T ss_pred eeCHH------HcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccc
Confidence 87654 34455 89999999999999888776554432 3899999999887666554432
Q ss_pred -----------------------------CCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCcc
Q 002897 245 -----------------------------LVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTM 295 (869)
Q Consensus 245 -----------------------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 295 (869)
.++|+.|++++|.+.+..+..|..+++|+.|+|++|++++..|..|.++++
T Consensus 236 L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 315 (844)
T 3j0a_A 236 LILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDN 315 (844)
T ss_dssp EECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSS
T ss_pred eecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCC
Confidence 268999999999999999999999999999999999999999999999999
Q ss_pred ccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCC----------------
Q 002897 296 LTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSL---------------- 359 (869)
Q Consensus 296 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~---------------- 359 (869)
|++|++++|++++..|..|..+++|+.|++++|++.+ +++..+...+.++.|+|++|.+++..
T Consensus 316 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 316 LQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI-IQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV 394 (844)
T ss_dssp CCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCC-CCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCC
T ss_pred CCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCc-cChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcc
Confidence 9999999999998889999999999999999999984 45545555666778888888876421
Q ss_pred --c----------------------ccccCCccccccccccccccccCCc-cccCCCCCcEEEeeCcccc-----CCCCc
Q 002897 360 --P----------------------SEIGNLKNLVQLDISGNRFSGDIPG-TLSACTSLEYVKMQDNSFS-----GSIPP 409 (869)
Q Consensus 360 --p----------------------~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~-----~~~p~ 409 (869)
| ..+.++++|+.|+|++|++++..+. .+..+++|+.|++++|.++ +..+.
T Consensus 395 ~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~ 474 (844)
T 3j0a_A 395 TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWD 474 (844)
T ss_dssp CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSS
T ss_pred cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchh
Confidence 1 1133677788888888888754433 3556788888888888886 34456
Q ss_pred cccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCC
Q 002897 410 SLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCG 477 (869)
Q Consensus 410 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 477 (869)
.|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.... .+++.+++++|.....
T Consensus 475 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~ 541 (844)
T 3j0a_A 475 VFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAP 541 (844)
T ss_dssp CSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCC
T ss_pred hhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCC
Confidence 788999999999999999999999999999999999999999987665433 7888999998865443
No 20
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-51 Score=428.51 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=208.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+|+.||||+++.. .....+.+.+|++++++++|||||++++++.+ .+.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~-----~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD-----DEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----CCE
Confidence 5799999999999999999999999999999999743 23446789999999999999999999999654 478
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+|||||+||+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 999999999999999998754 399999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+|+.+..... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+....+
T Consensus 178 la~~~~~~~~------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i 246 (311)
T 4aw0_A 178 TAKVLSPESK------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAKI 246 (311)
T ss_dssp TCEECCTTTT------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH
T ss_pred CceecCCCCC------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 9998754321 1233456899999999999999999999999999999999999999975321 1222111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... .+ ++..++++.+++.+||+.||++|||++|++.
T Consensus 247 ~~~~~------~~------------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 247 IKLEY------DF------------------PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp HHTCC------CC------------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred HcCCC------CC------------------CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 11110 00 0122345789999999999999999998743
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=439.64 Aligned_cols=250 Identities=22% Similarity=0.343 Sum_probs=209.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
+.|++.++||+|+||+||+|++..+|+.||||+++.......+.+.+|+.+|+.++|||||++++++.+. +..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~-----~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC-----CEEEE
Confidence 5699999999999999999999999999999999876666667789999999999999999999997654 78999
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
|||||+||+|.++++..+ +++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 226 VmEy~~gG~L~~~i~~~~-------l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhccC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 999999999999997653 89999999999999999999999 99999999999999999999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhccc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPE 793 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 793 (869)
.+.... ......+||+.|||||++.+..|+.++|||||||++|||++|+.||..... .+....+...
T Consensus 296 ~~~~~~--------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i~~~ 362 (423)
T 4fie_A 296 QVSKEV--------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMKMIRDN 362 (423)
T ss_dssp ECCSSC--------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHS
T ss_pred ECCCCC--------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHcC
Confidence 765432 233456899999999999999999999999999999999999999975321 1111111000
Q ss_pred ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 794 KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 794 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..+.+ .....++.++.+|+.+||+.||++|||++|+++
T Consensus 363 -----~~~~~----------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 363 -----LPPRL----------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp -----CCCCC----------------SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----CCCCC----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00000 001123456789999999999999999999986
No 22
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-50 Score=424.65 Aligned_cols=275 Identities=24% Similarity=0.332 Sum_probs=205.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.+|.+.++||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||+++++|...+ ......++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 4677889999999999999998 6999999999654321 122344566667889999999999987642 22246899
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeecCCCcEEEcc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC-----KPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
|||||++|+|.++++... +++..+.+++.|+++||+|||+++ .++||||||||+|||++.++++||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~~-------l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 999999999999998653 899999999999999999999762 45899999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC------CCCccccchhhhHHHHHHHcCCCCCCcCccCCc-
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS------EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL- 781 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~- 781 (869)
||+|+........ .........||+.|||||++.+. .++.++|||||||++|||+||++||........
T Consensus 152 FGla~~~~~~~~~----~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p 227 (303)
T 3hmm_A 152 LGLAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp CTTCEEEETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCT
T ss_pred CCCCccccCCCCc----eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcccccccc
Confidence 9999876543211 11123346799999999998764 367899999999999999999988754322211
Q ss_pred ---------hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 ---------TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ---------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
............. .+|.+ .......+++..+.+++.+||+.||++||||.||++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~----~rp~~-------------p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 228 YYDLVPSDPSVEEMRKVVCEQK----LRPNI-------------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC----CCCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred chhcccccchHHHHHHHHhccc----CCCCC-------------CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 1111111111111 11111 111222356778999999999999999999999999
Q ss_pred HHHHHHHh
Q 002897 853 KLCAAREA 860 (869)
Q Consensus 853 ~L~~~~~~ 860 (869)
.|+++.+.
T Consensus 291 ~L~~l~~~ 298 (303)
T 3hmm_A 291 TLSQLSQQ 298 (303)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99998764
No 23
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-50 Score=469.73 Aligned_cols=447 Identities=18% Similarity=0.191 Sum_probs=395.5
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
.||+++|+++ .++...+..+++|++|+|++|+++++.|.+|.++++|++|+|++|+++...|++|+++++|++|+|++|
T Consensus 32 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 110 (570)
T 2z63_A 32 NLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (570)
T ss_dssp EEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccc
Confidence 3799999999 677766778999999999999999888899999999999999999999888899999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcc-cCCchhhcCCcchhhhhccccccceeccccccCCCCC----cEEEccCCcc
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHG-SLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNL----ELLELRDNQF 155 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L----~~L~L~~N~i 155 (869)
++++..+..|+++++|++|+|++|.+.+ .+| ..|.++++|++|++++|.+++..+..+..+++| +.|++++|.+
T Consensus 111 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l 189 (570)
T 2z63_A 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLP-EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM 189 (570)
T ss_dssp CCCCSTTCSCTTCTTCCEEECCSSCCCCCCCC-GGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCC
T ss_pred ccccCCCccccccccccEEecCCCccceecCh-hhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCc
Confidence 9997766689999999999999999984 356 568999999999999999999989999999999 8999999999
Q ss_pred ccccCcCccCCCCCCEEEccCccCCC-------------------------------CCCCC------------------
Q 002897 156 IGKMSINFNSLKNLSVLILGNNHLGN-------------------------------RAAND------------------ 186 (869)
Q Consensus 156 ~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------------------~~~~~------------------ 186 (869)
.++.+..|..+ +|+.|++++|.... ++...
T Consensus 190 ~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 190 NFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred eecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence 99999888876 79999998873221 00000
Q ss_pred ---cchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCC
Q 002897 187 ---LDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVP 263 (869)
Q Consensus 187 ---~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 263 (869)
-..+..+..+++|++|++++|.++ .+|..+..+ .|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~ 342 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFS 342 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCC
T ss_pred hhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccccc
Confidence 011235677899999999999998 578778777 4999999999998 5565 578999999999999886665
Q ss_pred ccccCCCCCCEEEccCccccCcC--CCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccccc
Q 002897 264 PEIGWLKNLQSLYLNSNFLHGYI--PSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSV 341 (869)
Q Consensus 264 ~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 341 (869)
. ..+++|++|++++|.+++.. +..+.++++|++|++++|++.+. +..+..+++|+.|++++|++.+..|...+..
T Consensus 343 ~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 419 (570)
T 2z63_A 343 E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLS 419 (570)
T ss_dssp C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTT
T ss_pred c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhc
Confidence 5 78999999999999998654 67788999999999999999954 4449999999999999999997777666777
Q ss_pred ccccceecccCCcccCCCcccccCCcccccccccccccc-ccCCccccCCCCCcEEEeeCccccCCCCccccccccccEE
Q 002897 342 TTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFS-GDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVL 420 (869)
Q Consensus 342 ~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 420 (869)
.+.++.|++++|.+++..|..+.++++|++|+|++|.++ +.+|..+..+++|+.|++++|++++..|.+|+.+++|+.|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 778899999999999999999999999999999999998 5789999999999999999999998889999999999999
Q ss_pred EccCCcccCCCccccccccccCeeccccccCcccCCCCC
Q 002897 421 DLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKG 459 (869)
Q Consensus 421 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~ 459 (869)
+|++|++++..|..+.++++|+.|++++|+++|.+|...
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 999999998888889999999999999999999988754
No 24
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.3e-50 Score=414.76 Aligned_cols=247 Identities=26% Similarity=0.379 Sum_probs=191.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||+||+|++..+|+.||||+++.. .....+.+.+|++++++++|||||++++++.+ .+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~-----~~ 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS-----KD 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CC
Confidence 36899999999999999999999999999999999643 23345678999999999999999999999654 47
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..|+||||+ +|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 899999999 679999998765 399999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+..... ......+||+.|||||++.+..+ +.++||||+||++|+|+||+.||.... .....+
T Consensus 157 Gla~~~~~~---------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~ 222 (275)
T 3hyh_A 157 GLSNIMTDG---------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFK 222 (275)
T ss_dssp SCC------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH
T ss_pred CCCeecCCC---------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHH
Confidence 999865432 22234679999999999998876 579999999999999999999997532 122222
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... . .+...++++.+++.+||+.||++|||++|+++
T Consensus 223 ~i~~~~~------~------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 223 NISNGVY------T------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHTCC------C------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHcCCC------C------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 1111100 0 00123456789999999999999999999987
No 25
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.9e-50 Score=432.32 Aligned_cols=275 Identities=22% Similarity=0.311 Sum_probs=217.8
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCC-----CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCC-CccceEEEE
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGEN-----GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRH-RNLIKIITI 619 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~~~~~ 619 (869)
.+++...++|++.+.||+|+||+||+|++... ++.||||+++... ....+.+.+|++++++++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 34445567899999999999999999997543 4689999996543 3345779999999999965 899999999
Q ss_pred eeccccCCCceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 002897 620 CSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHG 689 (869)
Q Consensus 620 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 689 (869)
|... ....++|||||++|+|.++++...... ....+++.++..++.|||+||+|||++ +||||
T Consensus 137 ~~~~----~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 137 CTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp ECCT----TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEec----CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 8643 356899999999999999998654211 123489999999999999999999999 99999
Q ss_pred CCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-
Q 002897 690 DLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS- 768 (869)
Q Consensus 690 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t- 768 (869)
||||+|||+++++.+||+|||+|+.+...... .......||+.|||||++.+..|+.++|||||||++|||+|
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~------~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCc------eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 99999999999999999999999876543211 12344678999999999999999999999999999999998
Q ss_pred CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 769 RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 769 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|+.||................. ....++.+++++.+++.+||+.||++|||++
T Consensus 284 G~~Pf~~~~~~~~~~~~i~~g~---------------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ 336 (353)
T 4ase_A 284 GASPYPGVKIDEEFCRRLKEGT---------------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 336 (353)
T ss_dssp SCCSSTTCCCSHHHHHHHHHTC---------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCC---------------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHH
Confidence 9999975432211111111100 0011123456788999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 002897 849 DVVVKLCAAREAF 861 (869)
Q Consensus 849 evl~~L~~~~~~~ 861 (869)
||++.|+.+.++.
T Consensus 337 eil~~L~~llq~~ 349 (353)
T 4ase_A 337 ELVEHLGNLLQAN 349 (353)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 26
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.6e-50 Score=464.14 Aligned_cols=456 Identities=19% Similarity=0.247 Sum_probs=368.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
.|+++++++ +||.+++ ++|++|+|++|+++++.|.+|.++++|++|+|++|+|++..|++|+++++|++|+|++|+
T Consensus 10 c~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EECTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 478899999 9999876 799999999999998889999999999999999999998888999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccc-cceeccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNN-LTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+++..|..|+++++|++|+|++|++.+.-....+.++++|++|++++|. +....+..|.++++|++|++++|.+.+..+
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 9988778899999999999999999732122468999999999999998 555556789999999999999999999999
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCC--ChhhhhccccceEEEecCCcccccC
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLL--PHSLANLSNTMTTIDIGGNYFSGTI 238 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~--~~~~~~l~~~L~~L~l~~n~l~~~~ 238 (869)
..|..+++|++|++++|.+..++.. .+..+++|++|++++|++++.. |..+......|+.|++++|.+++..
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~~~~~~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESAFLLEI------FADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp TTTTTCSEEEEEEEECSBSTTHHHH------HHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred hhhhccccCceEecccCcccccchh------hHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 9999999999999999998765432 3456899999999999998642 2222222334777777777776543
Q ss_pred Cc----cccCCCCCCeeecccCcceecC-----------------------------------CccccCCCCCCEEEccC
Q 002897 239 PP----GLGNLVHLNSIAMEGNQLIGTV-----------------------------------PPEIGWLKNLQSLYLNS 279 (869)
Q Consensus 239 ~~----~~~~l~~L~~L~l~~n~l~~~~-----------------------------------~~~~~~l~~L~~L~L~~ 279 (869)
+. .+..+++|+.|++++|.+.+.. +..+...++|+.|++++
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~ 319 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVEN 319 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEES
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEecc
Confidence 32 2344556666666666654321 11112235788888888
Q ss_pred ccccCcCCCCC-CCCccccceecccccccccCC---cCccCccccceeeccCcccCCCCC-ccccccccccceecccCCc
Q 002897 280 NFLHGYIPSSL-GNLTMLTLLALEINNLQGKIP---SSLGNCTSLIMLTLSKNKLDGVLP-PQILSVTTLSLFLNLSDNL 354 (869)
Q Consensus 280 N~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~~~~l~~L~l~~N~ 354 (869)
|.++ .+|..+ .++++|++|++++|++++..| ..++.+++|++|++++|++++..+ ...+.....++.|++++|+
T Consensus 320 n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 398 (549)
T 2z81_A 320 SKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT 398 (549)
T ss_dssp SCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCC
T ss_pred Cccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCC
Confidence 8887 455544 579999999999999987653 457889999999999999984322 1345556678899999999
Q ss_pred ccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccc
Q 002897 355 LSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKY 434 (869)
Q Consensus 355 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 434 (869)
++ .+|..+..+++|++|++++|.++ .+|..+. ++|++|++++|+|++.+ ..+++|++|+|++|+|+ .+|.
T Consensus 399 l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~- 468 (549)
T 2z81_A 399 FH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD- 468 (549)
T ss_dssp CC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-
T ss_pred Cc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-
Confidence 98 68888999999999999999998 4555442 68999999999998642 57899999999999998 6776
Q ss_pred cccccccCeeccccccCcccCCC-CCccCCCccccccCCcccCCC
Q 002897 435 LENLSFLEYLNLSYNHFEGEVPK-KGVFSNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 435 ~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~ 478 (869)
...+++|+.|++++|++++.+|. ...+..++.+++++|++.|.+
T Consensus 469 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 469 ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 56899999999999999998876 467888999999999999864
No 27
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-50 Score=473.41 Aligned_cols=416 Identities=19% Similarity=0.265 Sum_probs=307.8
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccC---------------------------------ccCCcccc-
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLG---------------------------------GKIPDTLG- 67 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~---------------------------------~~~p~~~~- 67 (869)
.+++.|+|++|+++|.+|.+|+++++|++|+|++|.+. +..|..++
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 47888889988888888888888999999999888762 11111111
Q ss_pred ------------------CCCCCCEEeCc--CcccCccCCcccccCCCCcEEECcCCcCccc-----------------C
Q 002897 68 ------------------QLRKLIYLNIG--RNQFSGFIPPSIYNISSFEFIFLQSNRFHGS-----------------L 110 (869)
Q Consensus 68 ------------------~l~~L~~L~L~--~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~ 110 (869)
....++.+++. .|++++ +|..|+++++|++|+|++|++++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 11223333333 578887 788888888888888888888753 6
Q ss_pred Cchhhc--CCcchhhhhccccccceeccccccCCCCCcEEEccCCc-ccc-ccCcCccCC------CCCCEEEccCccCC
Q 002897 111 PFDMVA--NLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQ-FIG-KMSINFNSL------KNLSVLILGNNHLG 180 (869)
Q Consensus 111 ~~~~~~--~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~-i~~-~~~~~~~~l------~~L~~L~l~~n~l~ 180 (869)
|. .+. ++++|++|++++|++.+.+|..|+++++|++|+|++|+ +++ ..|..+..+ ++|++|++++|+++
T Consensus 240 p~-~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 240 TE-DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TS-CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred ch-hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 64 355 78888888888888887888888888888888888887 776 566666665 78888888888887
Q ss_pred CCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCC-CCeeecccCcce
Q 002897 181 NRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVH-LNSIAMEGNQLI 259 (869)
Q Consensus 181 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~ 259 (869)
.++.. ..+..+++|++|++++|++++.+| .+..+++ |+.|++++|.++ .+|..+..+++ |+.|++++|++.
T Consensus 319 ~ip~~-----~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~-L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~ 390 (636)
T 4eco_A 319 TFPVE-----TSLQKMKKLGMLECLYNQLEGKLP-AFGSEIK-LASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK 390 (636)
T ss_dssp SCCCH-----HHHTTCTTCCEEECCSCCCEEECC-CCEEEEE-ESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS
T ss_pred ccCch-----hhhccCCCCCEEeCcCCcCccchh-hhCCCCC-CCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc
Confidence 65530 147778888888888888887777 7777765 888888888887 77777888887 888888888877
Q ss_pred ecCCccccCCC--CCCEEEccCccccCcCCCCCC-------CCccccceecccccccccCCcCccCccccceeeccCccc
Q 002897 260 GTVPPEIGWLK--NLQSLYLNSNFLHGYIPSSLG-------NLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKL 330 (869)
Q Consensus 260 ~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 330 (869)
.+|..+..++ +|++|++++|.+++..|..+. .+++|+.|++++|+++...+..+..+++|++|+|++|++
T Consensus 391 -~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l 469 (636)
T 4eco_A 391 -YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNML 469 (636)
T ss_dssp -SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCC
T ss_pred -ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCC
Confidence 6677776654 788888888888877777777 777888888888888743333445578888888888888
Q ss_pred CCCCCcccccccc-------ccceecccCCcccCCCccccc--CCccccccccccccccccCCccccCCCCCcEEEe---
Q 002897 331 DGVLPPQILSVTT-------LSLFLNLSDNLLSGSLPSEIG--NLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKM--- 398 (869)
Q Consensus 331 ~~~~~~~~~~~~~-------~l~~L~l~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l--- 398 (869)
+ .+|...+.... .++.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 470 ~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 470 T-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp S-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred C-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 7 66666655443 6677888888887 5677776 77888888888888875 7777778888888888
Q ss_pred ---eCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCccc
Q 002897 399 ---QDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGE 454 (869)
Q Consensus 399 ---~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 454 (869)
++|++.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+.||+++|++...
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 45667777788888888888888888888 46776655 6788888888877653
No 28
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.3e-50 Score=418.56 Aligned_cols=248 Identities=25% Similarity=0.313 Sum_probs=195.6
Q ss_pred cCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|++.+.||+|+||+||+|++. .+++.||||+++... .....++.+|++++++++|||||++++++.+.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE----- 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET-----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 57999999999999999999874 468899999996432 22345688999999999999999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..|+|||||+||+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 78999999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+|+...... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+...
T Consensus 170 FGla~~~~~~~--------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~ 236 (304)
T 3ubd_A 170 FGLSKESIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMT 236 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred cccceeccCCC--------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHH
Confidence 99998654322 223456799999999999999999999999999999999999999975321 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM-----RDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 852 (869)
....... ..+..+++++.+++.+||+.||++|||+ +|+++
T Consensus 237 ~i~~~~~------------------------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 237 MILKAKL------------------------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHHCCC------------------------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHHcCCC------------------------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1111100 0011234567899999999999999985 56654
No 29
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.4e-49 Score=412.32 Aligned_cols=263 Identities=22% Similarity=0.343 Sum_probs=194.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEEEEeecccc-------
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKIITICSSIDF------- 625 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 625 (869)
++|++.+.||+|+||+||+|+++.+|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 468999999999999999999999999999999975443 345678999999999999999999999865421
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
......|+|||||++|+|.+++...... ...++..++.++.||++||+|||++ +|+||||||+|||++.++.+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 1234579999999999999999876532 2356778899999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCcc----ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 706 VGDFGLAKFLPARPLDTVV----ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
|+|||+|+........... .........+||+.|||||++.+..|+.++|||||||++|||++ ||......
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-- 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-- 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH--
Confidence 9999999887654321111 01122344679999999999999999999999999999999996 77532111
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......... ..++...+..+.+.+++.+||+.||++|||+.|+++
T Consensus 234 --~~~~~~~~~~-----------------------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 --VRTLTDVRNL-----------------------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHHTT-----------------------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHhcC-----------------------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0101100000 001122334455678999999999999999999986
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.5e-49 Score=451.40 Aligned_cols=452 Identities=19% Similarity=0.178 Sum_probs=352.5
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
++|+++|+++ .||..++ ++|++|+|++|.|++..|.+|.++++|++|+|++|+|++..|++|+++++|++|+|++|
T Consensus 4 ~l~ls~n~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp EEECTTSCCS-SCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred eEecCCCCcc-ccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 4799999999 8999886 89999999999999888899999999999999999999888999999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcc-cCCchhhcCCcchhhhhccccccceeccccccCCCCC--cEEEccCCcc--
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHG-SLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNL--ELLELRDNQF-- 155 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~L~~N~i-- 155 (869)
+|++ +|.. .+++|++|+|++|++.+ .+| ..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 80 ~l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p-~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLVK-ISCH--PTVNLKHLDLSFNAFDALPIC-KEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCCE-EECC--CCCCCSEEECCSSCCSSCCCC-GGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred ceee-cCcc--ccCCccEEeccCCccccccch-hhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9994 5655 89999999999999984 244 579999999999999999986 467778888 9999999999
Q ss_pred ccccCcCccCCC-CCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCC-------CCCCCChhhhhccccceEE
Q 002897 156 IGKMSINFNSLK-NLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQ-------FGGLLPHSLANLSNTMTTI 227 (869)
Q Consensus 156 ~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~~L~~L 227 (869)
.+..+..|..+. +...+++++|.+...... ..+..+++|+.|++++|. +.+.+| .+..+.+ |+.|
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~-----~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~-L~~L 225 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILD-----VSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPK-LSNL 225 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCC-----CCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTT-CCEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhh-----hhhhcccceeeccccccccccccceeecchh-hhccccc-hhhc
Confidence 777777777765 344567777776543322 256778888888888887 544444 5666665 8888
Q ss_pred EecCCcccccCCcccc---CCCCCCeeecccCcceecCCccc-----cCCCCCCEEEccCccccCcCC-CCCCCC---cc
Q 002897 228 DIGGNYFSGTIPPGLG---NLVHLNSIAMEGNQLIGTVPPEI-----GWLKNLQSLYLNSNFLHGYIP-SSLGNL---TM 295 (869)
Q Consensus 228 ~l~~n~l~~~~~~~~~---~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~ 295 (869)
++++|.+++..+..+. ..++|++|++++|++.+.+|..+ +.+++|+.+++++|.+ .+| ..+..+ ++
T Consensus 226 ~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~ 303 (520)
T 2z7x_B 226 TLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMN 303 (520)
T ss_dssp EEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCC
T ss_pred cccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCc
Confidence 8888877653322221 13578888888888887778777 7788888888888887 333 333333 56
Q ss_pred ccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccC--CCcccccCCccccccc
Q 002897 296 LTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSG--SLPSEIGNLKNLVQLD 373 (869)
Q Consensus 296 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ 373 (869)
|+.|++++|.+.... .+..+++|++|++++|++++..|..+.. .+.++.|++++|++++ .+|..++.+++|++|+
T Consensus 304 L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 304 IKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGH-LTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCC-CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred eeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhcc-CCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 888888888876321 1267788888888888888766665543 4456778888888875 4556788888888888
Q ss_pred cccccccccCCc-cccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCc
Q 002897 374 ISGNRFSGDIPG-TLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFE 452 (869)
Q Consensus 374 L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 452 (869)
|++|.+++.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|++|++++|+++
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 888888864554 477888888888888888877666654 68888888888888 77777778888888888888888
Q ss_pred ccCCC-CCccCCCccccccCCcccCCC
Q 002897 453 GEVPK-KGVFSNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 453 ~~~~~-~~~~~~~~~~~~~~n~~~c~~ 478 (869)
+.++. ...+.+++.+++++|++.|.+
T Consensus 458 ~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 458 SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCHHHhccCCcccEEECcCCCCcccC
Confidence 65544 455677888888888888853
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.8e-48 Score=457.33 Aligned_cols=419 Identities=18% Similarity=0.282 Sum_probs=358.8
Q ss_pred cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccC------c---------------------------cCCcccc-
Q 002897 46 SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFS------G---------------------------FIPPSIY- 91 (869)
Q Consensus 46 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~------~---------------------------~~p~~~~- 91 (869)
.+++.|+|++|.+.+.+|.+|++|++|++|+|++|.+. + .+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 58999999999999999999999999999999999762 1 0111111
Q ss_pred ------------------cCCCCcEEECc--CCcCcccCCchhhcCCcchhhhhcccccccee-----------------
Q 002897 92 ------------------NISSFEFIFLQ--SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF----------------- 134 (869)
Q Consensus 92 ------------------~l~~L~~L~Ls--~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~----------------- 134 (869)
....++.+.+. +|++++ +|. .++++++|++|+|++|.+++.
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCH-HHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 11122333332 678886 885 599999999999999999985
Q ss_pred cccccc--CCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc-CCC--CCCCCcchhhhccCCCCCcEEEccCCCC
Q 002897 135 LPISLS--NASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH-LGN--RAANDLDFVTVLANCSKLENLGLYDNQF 209 (869)
Q Consensus 135 ~~~~l~--~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~-l~~--~~~~~~~~~~~l~~l~~L~~L~L~~n~l 209 (869)
+|..++ ++++|++|+|++|.+.+..|..|.++++|++|++++|+ ++. ++.. +.....+..+++|++|++++|++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~-~~~L~~~~~l~~L~~L~L~~n~l 317 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDD-WQALADAPVGEKIQIIYIGYNNL 317 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHH-HHHHHHSGGGGTCCEEECCSSCC
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHH-HHhhhccccCCCCCEEECCCCcC
Confidence 899999 99999999999999999999999999999999999998 864 3321 11111123449999999999999
Q ss_pred CCCCCh--hhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCC-CCEEEccCccccCcC
Q 002897 210 GGLLPH--SLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKN-LQSLYLNSNFLHGYI 286 (869)
Q Consensus 210 ~~~~~~--~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~ 286 (869)
+ .+|. .+..+++ |+.|++++|.+++.+| .|..+++|+.|++++|++. .+|..++.+++ |++|++++|.++ .+
T Consensus 318 ~-~ip~~~~l~~l~~-L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 318 K-TFPVETSLQKMKK-LGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp S-SCCCHHHHTTCTT-CCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred C-ccCchhhhccCCC-CCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 9 7888 8999986 9999999999998999 9999999999999999999 88888999999 999999999999 77
Q ss_pred CCCCCCCc--cccceecccccccccCCcCcc-------CccccceeeccCcccCCCCCccccccccccceecccCCcccC
Q 002897 287 PSSLGNLT--MLTLLALEINNLQGKIPSSLG-------NCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSG 357 (869)
Q Consensus 287 ~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~ 357 (869)
|..+..++ +|+.|++++|++++..|..|. .+++|+.|++++|+++ .+|..++...+.++.|+|++|+++
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~- 470 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT- 470 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-
Confidence 88887765 899999999999999999998 8899999999999999 788888887788899999999999
Q ss_pred CCccc-ccCC-------ccccccccccccccccCCcccc--CCCCCcEEEeeCccccCCCCccccccccccEEEc-----
Q 002897 358 SLPSE-IGNL-------KNLVQLDISGNRFSGDIPGTLS--ACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDL----- 422 (869)
Q Consensus 358 ~~p~~-~~~l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L----- 422 (869)
.+|.. +..+ ++|+.|+|++|.++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 471 ~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ 548 (636)
T 4eco_A 471 EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRD 548 (636)
T ss_dssp BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBC
T ss_pred CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcc
Confidence 55544 3333 39999999999999 7888887 99999999999999996 8999999999999999
Q ss_pred -cCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCCC
Q 002897 423 -SSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 423 -~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 478 (869)
++|++.+.+|..+.++++|++|++++|++ +.+|.. ..+.++.+++++|+..|-.
T Consensus 549 ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 549 AQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp TTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred cccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 56888999999999999999999999999 556654 3488999999999988743
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.1e-48 Score=458.13 Aligned_cols=442 Identities=19% Similarity=0.224 Sum_probs=358.8
Q ss_pred hhhhc-cCCcCEEeccCCcCccccCcccccCcCCCEEEc-cCCccCccCCcc----------------------------
Q 002897 16 EIGCY-LFKLENLSLAENHLTGQLPVSIGNLSALQVIDI-RGNRLGGKIPDT---------------------------- 65 (869)
Q Consensus 16 ~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L-~~n~i~~~~p~~---------------------------- 65 (869)
++.|. -.+++.|+|++|+++|.+|.+|++|++|++|+| ++|.+.+..|-.
T Consensus 316 GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~ 395 (876)
T 4ecn_A 316 GVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYD 395 (876)
T ss_dssp TEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCC
T ss_pred ceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccC
Confidence 34443 257999999999999999999999999999999 888876553211
Q ss_pred -----------------------ccCCCCCCEEeCcC--cccCccCCcccccCCCCcEEECcCCcCcc------------
Q 002897 66 -----------------------LGQLRKLIYLNIGR--NQFSGFIPPSIYNISSFEFIFLQSNRFHG------------ 108 (869)
Q Consensus 66 -----------------------~~~l~~L~~L~L~~--n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~------------ 108 (869)
......++.+.++. |++++ +|..|.++++|++|+|++|++++
T Consensus 396 ~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 396 QRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp GGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred cchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 01223455555554 88987 89999999999999999999996
Q ss_pred -----cCCchh-hcCCcchhhhhccccccceeccccccCCCCCcEEEccCCc-ccc-ccCcCcc-------CCCCCCEEE
Q 002897 109 -----SLPFDM-VANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQ-FIG-KMSINFN-------SLKNLSVLI 173 (869)
Q Consensus 109 -----~~~~~~-~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~-i~~-~~~~~~~-------~l~~L~~L~ 173 (869)
.+|... |.++++|+.|+|++|++.+.+|..|.++++|++|+|++|+ +++ ..|..|. .+++|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 278653 4499999999999999999999999999999999999998 876 5665444 445999999
Q ss_pred ccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCC-CCeee
Q 002897 174 LGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVH-LNSIA 252 (869)
Q Consensus 174 l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~ 252 (869)
|++|.++.++. ...+.++++|++|+|++|+++ .+| .+..+++ |+.|+|++|.++ .+|..+..+++ |+.|+
T Consensus 555 Ls~N~L~~ip~-----~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~-L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~ 625 (876)
T 4ecn_A 555 MGYNNLEEFPA-----SASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK-LTDLKLDYNQIE-EIPEDFCAFTDQVEGLG 625 (876)
T ss_dssp CCSSCCCBCCC-----HHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE-ESEEECCSSCCS-CCCTTSCEECTTCCEEE
T ss_pred eeCCcCCccCC-----hhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc-ceEEECcCCccc-cchHHHhhccccCCEEE
Confidence 99999986654 015889999999999999998 777 7888876 999999999999 88888999998 99999
Q ss_pred cccCcceecCCccccCCCC--CCEEEccCccccCcCCCCC---C--CCccccceecccccccccCCcCc-cCccccceee
Q 002897 253 MEGNQLIGTVPPEIGWLKN--LQSLYLNSNFLHGYIPSSL---G--NLTMLTLLALEINNLQGKIPSSL-GNCTSLIMLT 324 (869)
Q Consensus 253 l~~n~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~ 324 (869)
|++|++. .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|++++|+++ .+|..+ ..+++|+.|+
T Consensus 626 Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 626 FSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTII 703 (876)
T ss_dssp CCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEE
T ss_pred CcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEE
Confidence 9999998 77888877654 9999999999987666432 2 3458999999999999 556554 4889999999
Q ss_pred ccCcccCCCCCcccccccc-------ccceecccCCcccCCCccccc--CCccccccccccccccccCCccccCCCCCcE
Q 002897 325 LSKNKLDGVLPPQILSVTT-------LSLFLNLSDNLLSGSLPSEIG--NLKNLVQLDISGNRFSGDIPGTLSACTSLEY 395 (869)
Q Consensus 325 l~~N~l~~~~~~~~~~~~~-------~l~~L~l~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 395 (869)
|++|+++ .+|..++.... .++.|+|++|+++ .+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.
T Consensus 704 Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~ 780 (876)
T 4ecn_A 704 LSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKA 780 (876)
T ss_dssp CCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCE
T ss_pred CCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCE
Confidence 9999998 77877776543 7788999999999 7888887 89999999999999996 7888999999999
Q ss_pred EEeeC------ccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCC-CccCCCcccc
Q 002897 396 VKMQD------NSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GVFSNKTRFS 468 (869)
Q Consensus 396 L~l~~------N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~ 468 (869)
|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+.. ........+.
T Consensus 781 L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~ 857 (876)
T 4ecn_A 781 FGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYV 857 (876)
T ss_dssp EECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCE
T ss_pred EECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchhee
Confidence 99976 888889999999999999999999999 58888776 68999999999987654321 1112234455
Q ss_pred ccCCccc
Q 002897 469 LSGNGKL 475 (869)
Q Consensus 469 ~~~n~~~ 475 (869)
+.+|+..
T Consensus 858 L~~n~~~ 864 (876)
T 4ecn_A 858 LLYDKTQ 864 (876)
T ss_dssp EECCTTS
T ss_pred ecCCCcc
Confidence 6666544
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.3e-48 Score=448.62 Aligned_cols=440 Identities=19% Similarity=0.220 Sum_probs=365.2
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+||+++|++++ ++...+..+++|++|+|++|++++..|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 30 ~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n 108 (549)
T 2z81_A 30 SLDLSFNKITY-IGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN 108 (549)
T ss_dssp EEECCSSCCCE-ECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTC
T ss_pred EEECcCCccCc-cChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCC
Confidence 47999999994 54444568999999999999999888899999999999999999999887788999999999999999
Q ss_pred ccCcc-CCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccccc
Q 002897 81 QFSGF-IPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 81 ~i~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
++++. .|..|.++++|++|++++|.+.+.+|...|.++++|++|++++|.+++..|..+..+++|++|++++|.+..+.
T Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 188 (549)
T 2z81_A 109 PYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLL 188 (549)
T ss_dssp CCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHH
T ss_pred cccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccc
Confidence 99963 57889999999999999999656888888999999999999999999999999999999999999999987665
Q ss_pred CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhh----hccccceEEEecCCccc
Q 002897 160 SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLA----NLSNTMTTIDIGGNYFS 235 (869)
Q Consensus 160 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~----~l~~~L~~L~l~~n~l~ 235 (869)
...+..+++|++|++++|+++..+.... .....+++|+.|++++|++++..+..+. .+. .|+.|++++|.+.
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~-~L~~l~l~~~~~~ 264 (549)
T 2z81_A 189 EIFADILSSVRYLELRDTNLARFQFSPL---PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL-ELSEVEFDDCTLN 264 (549)
T ss_dssp HHHHHSTTTBSEEEEESCBCTTCCCCCC---SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCT-TCCEEEEESCEEE
T ss_pred hhhHhhcccccEEEccCCcccccccccc---chhhhhhcccceeccccccchhHHHHHHHHhhhhc-ccccccccccccc
Confidence 5556779999999999999987642211 1244577888888888877654443332 222 3677777777665
Q ss_pred ccC-----------------------------------CccccCCCCCCeeecccCcceecCCccc-cCCCCCCEEEccC
Q 002897 236 GTI-----------------------------------PPGLGNLVHLNSIAMEGNQLIGTVPPEI-GWLKNLQSLYLNS 279 (869)
Q Consensus 236 ~~~-----------------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~ 279 (869)
+.. +..+..+.+|+.|++++|.+. .+|..+ ..+++|++|+|++
T Consensus 265 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~ 343 (549)
T 2z81_A 265 GLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSE 343 (549)
T ss_dssp CCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCS
T ss_pred ccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccC
Confidence 421 001122457899999999987 666665 5799999999999
Q ss_pred ccccCcC---CCCCCCCccccceecccccccccCC--cCccCccccceeeccCcccCCCCCccccccccccceecccCCc
Q 002897 280 NFLHGYI---PSSLGNLTMLTLLALEINNLQGKIP--SSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNL 354 (869)
Q Consensus 280 N~l~~~~---~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~ 354 (869)
|++++.. +..++.+++|+.|++++|++++..+ ..+..+++|++|++++|+++ .+|..+.. ...++.|++++|+
T Consensus 344 N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-~~~L~~L~Ls~N~ 421 (549)
T 2z81_A 344 NLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQW-PEKMRFLNLSSTG 421 (549)
T ss_dssp SCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCC-CTTCCEEECTTSC
T ss_pred CccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcc-cccccEEECCCCC
Confidence 9999765 3458899999999999999985432 46899999999999999998 67766544 4567899999999
Q ss_pred ccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccc
Q 002897 355 LSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKY 434 (869)
Q Consensus 355 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 434 (869)
++ .+|..+ .++|++|+|++|++++.+ ..+++|++|++++|+|+ .+|. ...+++|++|+|++|++++.+|..
T Consensus 422 l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~ 492 (549)
T 2z81_A 422 IR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGI 492 (549)
T ss_dssp CS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTG
T ss_pred cc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHH
Confidence 98 455444 268999999999999642 57899999999999998 6776 567999999999999999998889
Q ss_pred cccccccCeeccccccCcccCCC
Q 002897 435 LENLSFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 435 ~~~l~~L~~l~l~~N~l~~~~~~ 457 (869)
+..+++|+.|++++|++.|.+|.
T Consensus 493 ~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 493 FDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp GGGCTTCCEEECCSSCBCCCHHH
T ss_pred HhcCcccCEEEecCCCccCCCcc
Confidence 99999999999999999998874
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.3e-46 Score=445.56 Aligned_cols=468 Identities=19% Similarity=0.209 Sum_probs=361.8
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
.|.++.+++ +||.++. +++++|||++|+|+++.+.+|.++++|++|+|++|+|+++.|++|+++++|++|+|++|+
T Consensus 36 ~~c~~~~l~-~vP~~lp---~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EECTTSCCS-SCCSSSC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EECCCCCcC-ccCCCCC---cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 367788999 9999886 589999999999998888899999999999999999998889999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
|++..+.+|.++++|++|+|++|+++ .+|...|+++++|++|++++|.++.. .|..+..+++|++|+|++|+|+++.+
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99888889999999999999999998 78888899999999999999999864 57889999999999999999999988
Q ss_pred cCccCCCCCC----EEEccCccCCCCCCCCcch------------------hhhccCCCCCcEEEccCCCC------CCC
Q 002897 161 INFNSLKNLS----VLILGNNHLGNRAANDLDF------------------VTVLANCSKLENLGLYDNQF------GGL 212 (869)
Q Consensus 161 ~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~------------------~~~l~~l~~L~~L~L~~n~l------~~~ 212 (869)
..|..+.+++ .++++.|.++.++...+.. ...+..+..++...+..+.. ...
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~ 270 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 270 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccc
Confidence 8887765544 6888888887665432110 01122223333222211110 000
Q ss_pred CC---------------------------hhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecC---
Q 002897 213 LP---------------------------HSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTV--- 262 (869)
Q Consensus 213 ~~---------------------------~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--- 262 (869)
.. ..+.... .++.+++.+|.+... ..+.....|+.|++.+|.+....
T Consensus 271 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~-~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~ 347 (635)
T 4g8a_A 271 DKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLT-NVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLK 347 (635)
T ss_dssp CTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGT-TCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCB
T ss_pred cccccccccchhhhhhhhhhhcccccchhhhhhhhc-ccccccccccccccc--cccccchhhhhhhcccccccCcCccc
Confidence 00 0111111 133333333333321 12233334444444444433221
Q ss_pred ----------------CccccCCCCCCEEEccCccccC--cCCCCCCCCccccceecccccccccCCcCccCccccceee
Q 002897 263 ----------------PPEIGWLKNLQSLYLNSNFLHG--YIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLT 324 (869)
Q Consensus 263 ----------------~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 324 (869)
+.....+++|+.|++++|.+.. ..+..+..+.+|+.+++..|.+. ..+..+..+++|+.++
T Consensus 348 l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~ 426 (635)
T 4g8a_A 348 LKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 426 (635)
T ss_dssp CTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEE
T ss_pred chhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchh
Confidence 1223356777777777777653 23444556677777777777776 4566788899999999
Q ss_pred ccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccc-cccCCccccCCCCCcEEEeeCccc
Q 002897 325 LSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRF-SGDIPGTLSACTSLEYVKMQDNSF 403 (869)
Q Consensus 325 l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l-~~~~p~~~~~l~~L~~L~l~~N~l 403 (869)
++.|+.....+...+.....+..+++++|.+++..+..+..+++|+.|+|++|.+ .+..|..|..+++|++|+|++|+|
T Consensus 427 l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L 506 (635)
T 4g8a_A 427 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 506 (635)
T ss_dssp CTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred hhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCcc
Confidence 9999888777777777788889999999999999999999999999999999985 446788999999999999999999
Q ss_pred cCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCC-Ccc-CCCccccccCCcccCCC
Q 002897 404 SGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GVF-SNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 404 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~~ 478 (869)
++..|..|.++++|++|+|++|+|++..|..|..+++|+.|||++|+|++.+|.. ..+ .+++.+++++|||.|++
T Consensus 507 ~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 507 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9989999999999999999999999988999999999999999999999988764 333 67899999999999975
No 35
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-47 Score=415.21 Aligned_cols=284 Identities=22% Similarity=0.271 Sum_probs=207.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeecc-ccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSI-DFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~~ 630 (869)
++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+++|+.++|||||++++++... .+.+...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999999999999999996432 33456788999999999999999999997653 2445578
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+|||||+ |+|.+++.... ++++.++..++.||+.||+|||++ |||||||||+|||++.++.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 999999996 68999998754 399999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+.+..... .........+||+.|||||++.+. .++.++||||+||++|||++|++||.+.... ..+......
T Consensus 204 la~~~~~~~~----~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~ 278 (398)
T 4b99_A 204 MARGLCTSPA----EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMV 278 (398)
T ss_dssp TCBCC-----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHH
T ss_pred eeeecccCcc----ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHh
Confidence 9987644321 111234457899999999998875 4699999999999999999999999753221 111111111
Q ss_pred hc--ccccccccCc-cchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VL--PEKVMEIVDP-SLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~--~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. +......... .....................+....++.+|+.+||..||++||||+|+++
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 11 1111111100 000000000000000000001123456789999999999999999999986
No 36
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.9e-47 Score=448.33 Aligned_cols=432 Identities=18% Similarity=0.216 Sum_probs=330.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEec-cCCcCccccCccc--------------------------------------
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSL-AENHLTGQLPVSI-------------------------------------- 42 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L-~~n~l~~~~~~~~-------------------------------------- 42 (869)
|||++++++|.||..++ .|++|+.|+| ++|.+++..|..-
T Consensus 328 L~Ls~~~L~G~ip~~l~-~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~ 406 (876)
T 4ecn_A 328 LSLAGFGAKGRVPDAIG-QLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQD 406 (876)
T ss_dssp EECTTTCCEEEECGGGG-GCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred EECccCCCCCcCchHHh-ccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHH
Confidence 78999999999999886 8999999999 8888765522110
Q ss_pred -------------ccCcCCCEEEccC--CccCccCCccccCCCCCCEEeCcCcccCc-----------------cCCccc
Q 002897 43 -------------GNLSALQVIDIRG--NRLGGKIPDTLGQLRKLIYLNIGRNQFSG-----------------FIPPSI 90 (869)
Q Consensus 43 -------------~~l~~L~~L~L~~--n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-----------------~~p~~~ 90 (869)
.....++.+.+.. |++++ +|..|+++++|++|+|++|+|++ .+|..+
T Consensus 407 ~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l 485 (876)
T 4ecn_A 407 AINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEEL 485 (876)
T ss_dssp HHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhh
Confidence 1112233334433 77776 67788888888888888888886 277776
Q ss_pred c--cCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccc-cce-eccccccCCC-------CCcEEEccCCcccccc
Q 002897 91 Y--NISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNN-LTG-FLPISLSNAS-------NLELLELRDNQFIGKM 159 (869)
Q Consensus 91 ~--~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~-i~~-~~~~~l~~l~-------~L~~L~L~~N~i~~~~ 159 (869)
+ ++++|++|+|++|.+.+.+| ..|.++++|+.|+|++|+ +++ .+|..+.+++ +|++|+|++|+++ ..
T Consensus 486 ~f~~L~~L~~L~Ls~N~l~~~iP-~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~i 563 (876)
T 4ecn_A 486 SWSNLKDLTDVELYNCPNMTQLP-DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EF 563 (876)
T ss_dssp CGGGCTTCCEEEEESCTTCCSCC-GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BC
T ss_pred hhccCCCCCEEECcCCCCCccCh-HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-cc
Confidence 6 88888888888888777777 557788888888888887 776 6666555544 8888888888887 45
Q ss_pred Cc--CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccccc
Q 002897 160 SI--NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGT 237 (869)
Q Consensus 160 ~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 237 (869)
|. .|..+++|+.|+|++|.++.++ .|..+++|++|+|++|+++ .+|..+..+++.|+.|+|++|.++ .
T Consensus 564 p~~~~l~~L~~L~~L~Ls~N~l~~lp--------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~ 633 (876)
T 4ecn_A 564 PASASLQKMVKLGLLDCVHNKVRHLE--------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-Y 633 (876)
T ss_dssp CCHHHHTTCTTCCEEECTTSCCCBCC--------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-S
T ss_pred CChhhhhcCCCCCEEECCCCCcccch--------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-c
Confidence 55 7888888888888888887554 3777888888888888887 677777777655888888888887 6
Q ss_pred CCccccCCCC--CCeeecccCcceecCCccc---c--CCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccC
Q 002897 238 IPPGLGNLVH--LNSIAMEGNQLIGTVPPEI---G--WLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKI 310 (869)
Q Consensus 238 ~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 310 (869)
+|..+..++. |+.|++++|++.+.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+|++|+|+ .+
T Consensus 634 lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~i 712 (876)
T 4ecn_A 634 IPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SI 712 (876)
T ss_dssp CCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CC
T ss_pred CchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-cc
Confidence 7777766654 8888888888876555322 2 3347888888888888433333447788888888888888 55
Q ss_pred CcCccC--------ccccceeeccCcccCCCCCcccc-ccccccceecccCCcccCCCcccccCCcccccccccc-----
Q 002897 311 PSSLGN--------CTSLIMLTLSKNKLDGVLPPQIL-SVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISG----- 376 (869)
Q Consensus 311 ~~~~~~--------l~~L~~L~l~~N~l~~~~~~~~~-~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~----- 376 (869)
|..+.. +++|+.|+|++|+++ .+|..++ ...+.++.|+|++|++++ +|..+.++++|+.|+|++
T Consensus 713 p~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls 790 (876)
T 4ecn_A 713 PENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAE 790 (876)
T ss_dssp CTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTT
T ss_pred ChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcc
Confidence 554333 338888888888888 6777665 455667788888888886 788899999999999976
Q ss_pred -ccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcc
Q 002897 377 -NRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEG 453 (869)
Q Consensus 377 -N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 453 (869)
|.+.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++....+..+.....+..+.|++|++..
T Consensus 791 ~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 791 GNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred cccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 888889999999999999999999999 58898876 699999999999997777788777778888898888764
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.3e-46 Score=428.46 Aligned_cols=439 Identities=18% Similarity=0.194 Sum_probs=367.0
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+||+++|+++ .+|...+..+++|++|+|++|+|++..|.+|.++++|++|+|++|+|+ .+|.. .+++|++|+|++|
T Consensus 25 ~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N 100 (520)
T 2z7x_B 25 ILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFN 100 (520)
T ss_dssp EEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSS
T ss_pred EEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCC
Confidence 4799999999 677666678999999999999999888999999999999999999999 56665 8999999999999
Q ss_pred ccCc-cCCcccccCCCCcEEECcCCcCcccCCchhhcCCcch--hhhhcccccc--ceeccccccCCC-CCcEEEccCCc
Q 002897 81 QFSG-FIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNL--RKFVAAKNNL--TGFLPISLSNAS-NLELLELRDNQ 154 (869)
Q Consensus 81 ~i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L--~~L~l~~n~i--~~~~~~~l~~l~-~L~~L~L~~N~ 154 (869)
++++ .+|..|+++++|++|+|++|++.+ ..+..+++| +.|++++|.+ .+..|..+..+. +...+++++|.
T Consensus 101 ~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~ 176 (520)
T 2z7x_B 101 AFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNK 176 (520)
T ss_dssp CCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSS
T ss_pred ccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCc
Confidence 9997 478999999999999999999974 357778888 9999999999 778888888776 45567889998
Q ss_pred ccccc-CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhh---ccccceEEEec
Q 002897 155 FIGKM-SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLAN---LSNTMTTIDIG 230 (869)
Q Consensus 155 i~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~~L~~L~l~ 230 (869)
+.+.. ...+..+++|+.|++++|........-......+..+++|+.|++++|.+++..+..+.. .. .|+.|+++
T Consensus 177 ~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~-~L~~L~l~ 255 (520)
T 2z7x_B 177 EFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHT-TVWYFSIS 255 (520)
T ss_dssp CCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTS-SCSEEEEE
T ss_pred chhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhC-cccEEEee
Confidence 76544 446889999999999999611000000012236889999999999999987543332221 22 49999999
Q ss_pred CCcccccCCccc-----cCCCCCCeeecccCcceecCC-ccccCC---CCCCEEEccCccccCcCCCCCCCCccccceec
Q 002897 231 GNYFSGTIPPGL-----GNLVHLNSIAMEGNQLIGTVP-PEIGWL---KNLQSLYLNSNFLHGYIPSSLGNLTMLTLLAL 301 (869)
Q Consensus 231 ~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 301 (869)
+|.+++.+|..+ .++++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++
T Consensus 256 ~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~L 331 (520)
T 2z7x_B 256 NVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDF 331 (520)
T ss_dssp EEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEEC
T ss_pred cccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEe
Confidence 999999999998 9999999999999998 445 555544 68999999999987432 2378999999999
Q ss_pred ccccccccCCcCccCccccceeeccCcccCC--CCCccccccccccceecccCCcccCCCcc-cccCCcccccccccccc
Q 002897 302 EINNLQGKIPSSLGNCTSLIMLTLSKNKLDG--VLPPQILSVTTLSLFLNLSDNLLSGSLPS-EIGNLKNLVQLDISGNR 378 (869)
Q Consensus 302 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~~~~l~~L~l~~N~l~~~~p~-~~~~l~~L~~L~L~~N~ 378 (869)
++|++++..|..+..+++|++|++++|++++ .+|.. +.....++.|++++|++++.+|. .+..+++|++|++++|.
T Consensus 332 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~ 410 (520)
T 2z7x_B 332 SNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEM-TTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNI 410 (520)
T ss_dssp CSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHH-HTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSC
T ss_pred ECCccChhhhhhhccCCCCCEEEccCCccCccccchHH-HhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCC
Confidence 9999998899999999999999999999984 22233 44456778999999999985665 48899999999999999
Q ss_pred ccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccc-cccccccCeeccccccCcccCCC
Q 002897 379 FSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKY-LENLSFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 379 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~l~~N~l~~~~~~ 457 (869)
+++..|..+. ++|+.|++++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|++|++++|++++.++.
T Consensus 411 l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 411 LTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp CCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 9988877665 79999999999999 88988889999999999999999 45654 89999999999999999987764
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.3e-45 Score=428.71 Aligned_cols=431 Identities=19% Similarity=0.232 Sum_probs=259.4
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
++|+++|+++ .||.+++ ++|++|+|++|.|+++.|.+|.++++|++|+|++|+|++..|++|+++++|++|+|++|
T Consensus 35 ~l~ls~~~L~-~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 35 MVDYSNRNLT-HVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp EEECTTSCCC-SCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEEcCCCCCc-cCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 3789999999 7998875 79999999999999888889999999999999999999888999999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCC-chhhcCCcchhhhhccccccceeccccccCCCCC--cEEEccCCcc--
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLP-FDMVANLPNLRKFVAAKNNLTGFLPISLSNASNL--ELLELRDNQF-- 155 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L--~~L~L~~N~i-- 155 (869)
+|+. +|.. .+++|++|+|++|++. .+| ...|+++++|++|++++|.++.. .+..+++| ++|++++|.+
T Consensus 111 ~l~~-lp~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQN-ISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCCE-ECSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred cCCc-cCcc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9994 5555 8999999999999998 554 26799999999999999999863 45555666 9999999998
Q ss_pred ccccCcCccCCC--CCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC----CCChhhhhccc-------
Q 002897 156 IGKMSINFNSLK--NLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG----LLPHSLANLSN------- 222 (869)
Q Consensus 156 ~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~------- 222 (869)
.+..+..|..+. .+ .++++.|.+...... ..+..+++|+.|++++|+... .....+..+..
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~-----~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~ 257 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVN-----MSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQ 257 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCE-----EEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhh-----hcccccceEEEecccccccccchHHHHHHHHhccCcceEEEec
Confidence 777777777654 22 345566655442211 134555666666666654110 00112222222
Q ss_pred -------------------cceEEEecCCcccccCCccc-----cCCCCCCeeecccCcceecCC-ccccC---CCCCCE
Q 002897 223 -------------------TMTTIDIGGNYFSGTIPPGL-----GNLVHLNSIAMEGNQLIGTVP-PEIGW---LKNLQS 274 (869)
Q Consensus 223 -------------------~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~~~-~~~~~---l~~L~~ 274 (869)
.|++|++++|.+++.+|..+ .+++.|+.+++..|.+ .+| ..+.. ..+|++
T Consensus 258 ~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 258 HIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSE
T ss_pred CCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceE
Confidence 25555555555555555544 4444444444444443 222 11111 134555
Q ss_pred EEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCC-ccccccccccceecccCC
Q 002897 275 LYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLP-PQILSVTTLSLFLNLSDN 353 (869)
Q Consensus 275 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~~~~l~~L~l~~N 353 (869)
|++++|.+.... ....+++|++|++++|++++..|..+..+++|++|++++|++++..+ +..+.....++.|++++|
T Consensus 336 L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N 413 (562)
T 3a79_B 336 LSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413 (562)
T ss_dssp EEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTS
T ss_pred EEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCC
Confidence 566555554221 11455556666666666655555555566666666666665552111 111222333444555555
Q ss_pred cccCCCcc-cccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCc
Q 002897 354 LLSGSLPS-EIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIP 432 (869)
Q Consensus 354 ~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 432 (869)
++++.+|. .+..+++|++|+|++|.+++..|..+. ++|+.|++++|+|+ .+|..+..+++|++|+|++|+|+ .+|
T Consensus 414 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~ 489 (562)
T 3a79_B 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVP 489 (562)
T ss_dssp CCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCC
T ss_pred cCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCC
Confidence 55442222 344445555555555555443333332 34555555555554 34444444555555555555554 233
Q ss_pred cc-cccccccCeeccccccCcccCC
Q 002897 433 KY-LENLSFLEYLNLSYNHFEGEVP 456 (869)
Q Consensus 433 ~~-~~~l~~L~~l~l~~N~l~~~~~ 456 (869)
.. +..+++|+.|++++|++.|.++
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 490 DGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCcCCCcc
Confidence 22 4444555555555555544433
No 39
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-45 Score=397.49 Aligned_cols=207 Identities=22% Similarity=0.331 Sum_probs=171.5
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 626 (869)
...++|++.++||+|+||+||+|+++ .+++.||+|++.... ...++.+|+++++.+ +||||+++++++.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 34578999999999999999999874 467899999986543 336788999999998 69999999998765
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAH 705 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~k 705 (869)
.+..++||||+++|+|.++++. +++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+|
T Consensus 92 -~~~~~lvmE~~~g~~L~~~~~~---------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 92 -NDHVVIAMPYLEHESFLDILNS---------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp -TTEEEEEEECCCCCCHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEE
T ss_pred -CCEEEEEEeCCCcccHHHHHcC---------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEE
Confidence 3789999999999999999842 88999999999999999999999 99999999999999877 7999
Q ss_pred EccccccccCCCCCCCCcc--------------------ccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHH
Q 002897 706 VGDFGLAKFLPARPLDTVV--------------------ETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLL 764 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~--------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~ 764 (869)
|+|||+|+........... .........+||+.|+|||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 9999999876543211100 001123346799999999998776 4899999999999999
Q ss_pred HHHcCCCCCCcC
Q 002897 765 EMFSRRRPTDSM 776 (869)
Q Consensus 765 el~tg~~pf~~~ 776 (869)
||++|+.||...
T Consensus 239 ell~G~~Pf~~~ 250 (361)
T 4f9c_A 239 SLLSGRYPFYKA 250 (361)
T ss_dssp HHHHTCSSSSCC
T ss_pred HHHHCCCCCCCC
Confidence 999999999653
No 40
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.1e-44 Score=426.69 Aligned_cols=447 Identities=20% Similarity=0.172 Sum_probs=360.3
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+|||++|+|+ .||...|..+++|++|+|++|+|+++.|.+|.++++|++|+|++|+|++..+++|+++++|++|+|++|
T Consensus 56 ~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N 134 (635)
T 4g8a_A 56 NLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134 (635)
T ss_dssp EEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTS
T ss_pred EEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCC
Confidence 4899999999 899888889999999999999999888889999999999999999999887889999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCC----cEEEccCCccc
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNL----ELLELRDNQFI 156 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L----~~L~L~~N~i~ 156 (869)
+|+++.+..|+++++|++|+|++|++.+.-....+..+++|++|++++|++++..+..|..+.++ ..++++.|.+.
T Consensus 135 ~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 135 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp CCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 99988888999999999999999999732223678899999999999999999888888766554 36888888887
Q ss_pred cccCcCccCCCCCCEEEccCccCC-------------------------------CCCCCCc------------------
Q 002897 157 GKMSINFNSLKNLSVLILGNNHLG-------------------------------NRAANDL------------------ 187 (869)
Q Consensus 157 ~~~~~~~~~l~~L~~L~l~~n~l~-------------------------------~~~~~~~------------------ 187 (869)
.+.+..+..+ .++.|++.+|... ......+
T Consensus 215 ~i~~~~~~~~-~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~ 293 (635)
T 4g8a_A 215 FIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDY 293 (635)
T ss_dssp EECTTTTTTC-EEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCS
T ss_pred ccCcccccch-hhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcc
Confidence 6655544332 2334444433211 0000000
Q ss_pred -------------------------chhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccc
Q 002897 188 -------------------------DFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGL 242 (869)
Q Consensus 188 -------------------------~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~ 242 (869)
.....+.....|+.|++.+|.+....+..+ . .++.+++.+|.+... ...
T Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l---~-~L~~l~l~~n~~~~~--~~~ 367 (635)
T 4g8a_A 294 YLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKL---K-SLKRLTFTSNKGGNA--FSE 367 (635)
T ss_dssp CEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBC---T-TCCEEEEESCCSCCB--CCC
T ss_pred cccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccc---h-hhhhcccccccCCCC--ccc
Confidence 000123344556666666666654433322 2 266667777665532 234
Q ss_pred cCCCCCCeeecccCccee--cCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccC-CcCccCccc
Q 002897 243 GNLVHLNSIAMEGNQLIG--TVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKI-PSSLGNCTS 319 (869)
Q Consensus 243 ~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~ 319 (869)
..+++|+.|++++|.+.. ..+..+..+.+|+.|++..|.+. ..+..+..+++|+.+++..|+..... +..|..+++
T Consensus 368 ~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~ 446 (635)
T 4g8a_A 368 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 446 (635)
T ss_dssp CBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTT
T ss_pred ccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccc
Confidence 568899999999998853 45667778899999999999987 45667889999999999988876544 457889999
Q ss_pred cceeeccCcccCCCCCccccccccccceecccCCcc-cCCCcccccCCccccccccccccccccCCccccCCCCCcEEEe
Q 002897 320 LIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLL-SGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKM 398 (869)
Q Consensus 320 L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 398 (869)
++.++++.|++.+. ++..+.....++.|++++|.+ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 447 l~~l~ls~n~l~~~-~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~L 525 (635)
T 4g8a_A 447 LIYLDISHTHTRVA-FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 525 (635)
T ss_dssp CCEEECTTSCCEEC-CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccccccccccccc-cccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEEC
Confidence 99999999999854 445556667778999999985 4467889999999999999999999999999999999999999
Q ss_pred eCccccCCCCccccccccccEEEccCCcccCCCccccccc-cccCeeccccccCcccCCC
Q 002897 399 QDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENL-SFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 399 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~~~ 457 (869)
++|+|++..|..|..+++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|.+.+..
T Consensus 526 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 526 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp TTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999998888999999999999999999999999999988 6899999999999998764
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-44 Score=408.42 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=199.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHH---HHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSF---LTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.++||+|+||+||+|+++.+|+.||||+++... ....... ..++.+++.++|||||++++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~---- 263 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 263 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEE----
Confidence 367999999999999999999999999999999996432 1222233 344666777899999999999654
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
.+..|+|||||+||+|.+++.... .+++..++.++.||+.||+|||++ |||||||||+|||++.+|++||
T Consensus 264 -~~~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 264 -PDKLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp -SSEEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred -CCEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 488999999999999999998754 399999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
+|||+|+.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||....... ...
T Consensus 334 ~DFGlA~~~~~~~----------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~ 401 (689)
T 3v5w_A 334 SDLGLACDFSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHE 401 (689)
T ss_dssp CCCTTCEECSSCC----------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHH
T ss_pred cccceeeecCCCC----------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHH
Confidence 9999998765432 234679999999999865 579999999999999999999999997533221 111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
.......... ..+...++++.+|+.+||+.||++|++ ++||++
T Consensus 402 i~~~i~~~~~------------------------~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 402 IDRMTLTMAV------------------------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHHHCCC------------------------CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHhhcCCCC------------------------CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1111111100 001123456789999999999999998 677764
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-44 Score=414.24 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=209.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||++++++.+ ....+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~-----~~~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED-----DNEMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEC-----SSEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEE-----CCEEE
Confidence 3689999999999999999999999999999999977666666788999999999999999999999754 48899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC--CcEEEcccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD--MVAHVGDFG 710 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfg 710 (869)
+|||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 99999999999999976543 389999999999999999999999 99999999999999854 899999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... +....+
T Consensus 303 ~a~~~~~~~---------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~~~i 368 (573)
T 3uto_A 303 LTAHLDPKQ---------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETLRNV 368 (573)
T ss_dssp SCEECCTTS---------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHHH
T ss_pred ceeEccCCC---------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHH
Confidence 998775432 223457999999999999999999999999999999999999999753221 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... . ++. .....++..+.+|+.+||+.||++|||+.|+++
T Consensus 369 ~~~~~-~-~~~------------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 369 KSCDW-N-MDD------------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HTTCC-C-CCS------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HhCCC-C-CCc------------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11000 0 000 011123456789999999999999999999986
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7e-44 Score=414.09 Aligned_cols=434 Identities=16% Similarity=0.170 Sum_probs=335.0
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.....+++++++|+++ .+|..+. ++|++|+|++|+|++..|.+|+++++|++|+|++|+|++..|.+|.++++|++|
T Consensus 29 ~~~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 29 SNELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp ----CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 3455689999999999 5777664 899999999999998888999999999999999999999989999999999999
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccCcCccCCCCC--CEEEccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMSINFNSLKNL--SVLILGN 176 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~l~~ 176 (869)
+|++|++. .+|.. .+++|++|++++|++++. .|..|+++++|++|++++|++... .|..+++| ++|++++
T Consensus 106 ~Ls~N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~ 178 (562)
T 3a79_B 106 DVSHNRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDL 178 (562)
T ss_dssp ECTTSCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEE
T ss_pred ECCCCcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeec
Confidence 99999998 88865 899999999999999974 468999999999999999998763 45666666 9999999
Q ss_pred ccC--CCCCCCCcchhhhccCCC-CCcEEEccCCCCCCCCChh-hhhccccceEEEecCCc-----ccccCCccccCCCC
Q 002897 177 NHL--GNRAANDLDFVTVLANCS-KLENLGLYDNQFGGLLPHS-LANLSNTMTTIDIGGNY-----FSGTIPPGLGNLVH 247 (869)
Q Consensus 177 n~l--~~~~~~~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~-~~~l~~~L~~L~l~~n~-----l~~~~~~~~~~l~~ 247 (869)
|.+ +..... .+..+. +.-.+++++|.+.+..+.. +..+. .|+.|++++|. +.+ ....+..+++
T Consensus 179 n~l~~~~~~~~------~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~ 250 (562)
T 3a79_B 179 VSYHIKGGETE------SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALG-HLQLSNIKLNDENCQRLMT-FLSELTRGPT 250 (562)
T ss_dssp SSCCCCSSSCC------EEEECCEEEEEEEECSSSCCCCCCEEEESSEE-EEEEEEEECCSTTHHHHHH-HHHHHHSCSS
T ss_pred ccccccccCcc------cccccCcceEEEEecCccchhhhhhhcccccc-eEEEecccccccccchHHH-HHHHHhccCc
Confidence 999 655443 344443 1226688999988766653 34444 49999999985 221 1223455555
Q ss_pred CCeeecccCcceecC----CccccCCCCCCEEEccCccccCcCCCCC-----CCC-------------------------
Q 002897 248 LNSIAMEGNQLIGTV----PPEIGWLKNLQSLYLNSNFLHGYIPSSL-----GNL------------------------- 293 (869)
Q Consensus 248 L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l------------------------- 293 (869)
|+.|+++++.+.+.. +..+ ..++|++|++++|.+++.+|..+ .++
T Consensus 251 L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~ 329 (562)
T 3a79_B 251 LLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFA 329 (562)
T ss_dssp CEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHH
T ss_pred ceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhc
Confidence 555555555443211 1111 12355566666666555555444 333
Q ss_pred -ccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCC--CcccccCCcccc
Q 002897 294 -TMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGS--LPSEIGNLKNLV 370 (869)
Q Consensus 294 -~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~--~p~~~~~l~~L~ 370 (869)
.+|+.|++++|.+.... ....+++|++|++++|++++..|..+.. .+.++.|+|++|++++. +|..+.++++|+
T Consensus 330 ~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~ 406 (562)
T 3a79_B 330 EMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCST-LKRLQTLILQRNGLKNFFKVALMTKNMSSLE 406 (562)
T ss_dssp TCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCS-CSSCCEEECCSSCCCBTTHHHHTTTTCTTCC
T ss_pred cCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcc-cCCCCEEECCCCCcCCcccchhhhcCCCCCC
Confidence 34666777777665211 1278899999999999999877766644 45678899999999963 356799999999
Q ss_pred ccccccccccccCCc-cccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccc
Q 002897 371 QLDISGNRFSGDIPG-TLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYN 449 (869)
Q Consensus 371 ~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N 449 (869)
+|+|++|.+++.+|. .+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|++++|
T Consensus 407 ~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 407 TLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp EEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSS
T ss_pred EEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCC
Confidence 999999999974554 588999999999999999877776654 79999999999998 78888889999999999999
Q ss_pred cCcccCCC-CCccCCCccccccCCcccCCC
Q 002897 450 HFEGEVPK-KGVFSNKTRFSLSGNGKLCGG 478 (869)
Q Consensus 450 ~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~ 478 (869)
++++.++. ...++.++.+++++|++.|++
T Consensus 484 ~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 484 QLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 99976655 567788999999999999964
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.7e-43 Score=396.25 Aligned_cols=388 Identities=18% Similarity=0.222 Sum_probs=257.0
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCc-cCCccccCCCCCCEEeCcCc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGG-KIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~L~~n 80 (869)
++.++++++ .+|. +. ++|++|+|++|.|+++.|.+|.++++|++|+|++|.+.+ +.|.+|+++++|++|+|++|
T Consensus 15 ~~c~~~~l~-~lp~-l~---~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 15 AICINRGLH-QVPE-LP---AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EECCSSCCS-SCCC-CC---TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred cCcCCCCcc-cCCC-CC---CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 567888999 8997 43 789999999999998889999999999999999999874 45778999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCC-chhhcCCcchhhhhccccccceecccc-ccCCCCCcEEEccCCccccc
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLP-FDMVANLPNLRKFVAAKNNLTGFLPIS-LSNASNLELLELRDNQFIGK 158 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~l~~n~i~~~~~~~-l~~l~~L~~L~L~~N~i~~~ 158 (869)
++++..|..|.++++|++|+|++|++.+.++ ...|..+++|++|++++|.+++..|.. +.++++|++|++++|++.++
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 9998889999999999999999999975333 345788888888888888888776765 78888888888888888888
Q ss_pred cCcCccCC--CCCCEEEccCccCCCCCCCCcch--hhhccCCCCCcEEEccCCCCCCCCChhhhhcc--ccceEEEecCC
Q 002897 159 MSINFNSL--KNLSVLILGNNHLGNRAANDLDF--VTVLANCSKLENLGLYDNQFGGLLPHSLANLS--NTMTTIDIGGN 232 (869)
Q Consensus 159 ~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~--~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~~L~~L~l~~n 232 (869)
.+..+..+ .+|+.|++++|.+..++...+.. ...+..+++|++|++++|++++..|..+.... ..++.|++++|
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred ChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 88777766 67888888888887766542211 11234556777777777777766666665541 23666666666
Q ss_pred cccccCCccccCCCCCCeeecccCcceecCCccccC--CCCCCEEEccCccccCcCCCCCCCCccccceecccccccccC
Q 002897 233 YFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGW--LKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKI 310 (869)
Q Consensus 233 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 310 (869)
.+.+.. +..+.+....+..+.. .++|++|++++|.+++..|..+.++++|+.|++++|++++..
T Consensus 250 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 315 (455)
T 3v47_A 250 YNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKID 315 (455)
T ss_dssp TTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred cccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccC
Confidence 544211 0111111111111211 234555555555554444444444444444444444444333
Q ss_pred CcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCC
Q 002897 311 PSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSAC 390 (869)
Q Consensus 311 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 390 (869)
|.. |.++++|++|+|++|.+++..|..|.++
T Consensus 316 ~~~-------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 346 (455)
T 3v47_A 316 DNA-------------------------------------------------FWGLTHLLKLNLSQNFLGSIDSRMFENL 346 (455)
T ss_dssp TTT-------------------------------------------------TTTCTTCCEEECCSSCCCEECGGGGTTC
T ss_pred hhH-------------------------------------------------hcCcccCCEEECCCCccCCcChhHhcCc
Confidence 444 4444555555555555554445555555
Q ss_pred CCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCC
Q 002897 391 TSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPK 457 (869)
Q Consensus 391 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~ 457 (869)
++|++|++++|++++..|.+|..+++|++|+|++|++++..+..+..+++|++|++++|++++.+|.
T Consensus 347 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 347 DKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 5555555555555555555555566666666666666554444555666666666666666666554
No 45
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.2e-43 Score=370.07 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=209.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||+||+|.+..+|+.||||++........+.+.+|+.+++.++||||+++++++... +..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG-----DELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC-----CEEE
Confidence 46899999999999999999999989999999999876666667889999999999999999999997654 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 94 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 9999999999999998753 89999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....... .
T Consensus 164 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~-~ 230 (297)
T 3fxz_A 164 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIA-T 230 (297)
T ss_dssp EECCSTT--------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHH-H
T ss_pred eecCCcc--------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-h
Confidence 8765432 2234457999999999999999999999999999999999999999653211 1111000 0
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ...++.++..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~---------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 231 NGTPE---------------------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HCSCC---------------------CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCC---------------------CCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00000 0011234456889999999999999999999986
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.2e-42 Score=393.63 Aligned_cols=383 Identities=18% Similarity=0.196 Sum_probs=262.2
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCc-cCCcccccCCCCcEEECc
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSG-FIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~Ls 102 (869)
-+.++.++++++ .+|. + .++|++|+|++|+|++..|..|+++++|++|+|++|.+.+ +.+..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 345667777776 4554 2 2667777777777776667777777777777777776653 334556666666666666
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC--cCccCCCCCCEEEccCccCC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS--INFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~--~~~~~l~~L~~L~l~~n~l~ 180 (869)
+|++. +..|..|.++++|++|+|++|++++..+ ..|..+++|++|+|++|.++
T Consensus 88 ~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~ 142 (455)
T 3v47_A 88 YNQFL-------------------------QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142 (455)
T ss_dssp TCTTC-------------------------EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCC
T ss_pred CCccC-------------------------ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccC
Confidence 66665 3344455555555555555555544222 22555555555555555555
Q ss_pred CCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhcc-ccceEEEecCCcccccCCcc--------ccCCCCCCee
Q 002897 181 NRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLS-NTMTTIDIGGNYFSGTIPPG--------LGNLVHLNSI 251 (869)
Q Consensus 181 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~~L~~L~l~~n~l~~~~~~~--------~~~l~~L~~L 251 (869)
.+.+. ..+.++++|++|++++|++++..+..+..+. ..++.|++++|.+.+..+.. +..+++|++|
T Consensus 143 ~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L 217 (455)
T 3v47_A 143 KIQPA-----SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTL 217 (455)
T ss_dssp SCCCC-----GGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEE
T ss_pred ccCcc-----cccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeE
Confidence 54322 1245566666666666666655555555442 13666666666666444333 2355677777
Q ss_pred ecccCcceecCCccccCC---CCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCc--cccceeecc
Q 002897 252 AMEGNQLIGTVPPEIGWL---KNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNC--TSLIMLTLS 326 (869)
Q Consensus 252 ~l~~n~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~l~ 326 (869)
++++|++.+..|..+... ++|+.|++++|.+.+.. +..+.+....+..+..+ ++|+.|+++
T Consensus 218 ~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 283 (455)
T 3v47_A 218 DLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLS 283 (455)
T ss_dssp ECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECC
T ss_pred ecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEec
Confidence 777777776666655433 67778888777665321 11222222222233332 456666666
Q ss_pred CcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCC
Q 002897 327 KNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGS 406 (869)
Q Consensus 327 ~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 406 (869)
+|+++ +..|..++.+++|++|+|++|.+++..|..|.++++|++|++++|++++.
T Consensus 284 ~n~l~-------------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 338 (455)
T 3v47_A 284 KSKIF-------------------------ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSI 338 (455)
T ss_dssp SSCCC-------------------------EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred Ccccc-------------------------ccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCc
Confidence 66655 46677889999999999999999988899999999999999999999988
Q ss_pred CCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCC-CccCCCccccccCCcccCCCC
Q 002897 407 IPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK-GVFSNKTRFSLSGNGKLCGGL 479 (869)
Q Consensus 407 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 479 (869)
.|..|+.+++|++|+|++|++++..|..+..+++|++|++++|++++.++.. ..+++++.+++++|++.|.++
T Consensus 339 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 339 DSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8899999999999999999999888999999999999999999999876654 567899999999999999754
No 47
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=371.84 Aligned_cols=272 Identities=23% Similarity=0.369 Sum_probs=217.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||+||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++.+. ...+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD-----KRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC-----CeeE
Confidence 36788999999999999999999999999999998776667778899999999999999999999997654 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.++++.... .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999987543 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCcc------ccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 713 KFLPARPLDTVV------ETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 713 ~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+........... ..........||+.|+|||++.+..++.++|||||||++|||++|..||.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 235 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN 235 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence 877544321100 00011224679999999999999999999999999999999999999986533221111000
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
.... .+. ..+..++..+.+++.+||+.||++|||++|+++.|+++++....
T Consensus 236 ~~~~--------~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 236 VRGF--------LDR------------------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHHH--------HHH------------------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred hhcc--------ccc------------------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 0000 000 00012344578999999999999999999999999999887654
No 48
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.5e-43 Score=377.18 Aligned_cols=286 Identities=32% Similarity=0.492 Sum_probs=228.9
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSID 624 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 624 (869)
++.++...+++|++.+.||+|+||.||+|++. +|+.||||++........+.+.+|+++++.++||||+++++++..
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 106 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-- 106 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC--
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--
Confidence 34455567889999999999999999999975 799999999877666667889999999999999999999999654
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
.+..++||||+++|+|.+++...... ...+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+
T Consensus 107 ---~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~ 178 (321)
T 2qkw_B 107 ---RNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVP 178 (321)
T ss_dssp ---TTCCEEEEECCTTCBTGGGSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCE
T ss_pred ---CCeEEEEEEcCCCCcHHHHHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCE
Confidence 36789999999999999998765421 23489999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC-chH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG-LTL 783 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~-~~~ 783 (869)
||+|||.++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...
T Consensus 179 kl~Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~ 252 (321)
T 2qkw_B 179 KITDFGISKKGTELDQ------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL 252 (321)
T ss_dssp EECCCTTCEECSSSSC------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCH
T ss_pred EEeecccccccccccc------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHH
Confidence 9999999986543221 122234568999999999988899999999999999999999999997644322 222
Q ss_pred HHhhhh-hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 784 HEFSKM-VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 784 ~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
..+... ..........++... .....+++..+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 253 AEWAVESHNNGQLEQIVDPNLA--------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHHTHHHHTTTCCCSSSSSSCT--------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHhhhccccccHHHhcChhhc--------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 222211 111222333333221 1223467888999999999999999999999999999987654
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.5e-43 Score=377.62 Aligned_cols=290 Identities=34% Similarity=0.593 Sum_probs=232.2
Q ss_pred cCCCcccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhCCCCccceEE
Q 002897 539 QQFPMISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-GALKSFLTECEALRSIRHRNLIKII 617 (869)
Q Consensus 539 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~ 617 (869)
.....+++.++....++|++.+.||+|+||.||+|++. +|+.||||++..... .....+.+|+++++.++||||++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 44567889999999999999999999999999999875 799999999965432 2234689999999999999999999
Q ss_pred EEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 618 TICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
+++... ...++||||+++|+|.+++...... ..++++..+..++.|++.||+|||+.+.++|+||||||+||+
T Consensus 94 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil 166 (326)
T 3uim_A 94 GFCMTP-----TERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166 (326)
T ss_dssp EEECCS-----SCCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred EEEecC-----CceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence 997643 6779999999999999999876532 234899999999999999999999987778999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC-
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM- 776 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~- 776 (869)
++.++.+||+|||.++....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||+..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 239 (326)
T 3uim_A 167 LDEEFEAVVGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239 (326)
T ss_dssp ECTTCCEEECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHH
T ss_pred ECCCCCEEeccCccccccCcccc-------cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccc
Confidence 99999999999999987654321 2233456999999999998888999999999999999999999999632
Q ss_pred --ccCCchHHHhhhhhccc-ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 777 --FHEGLTLHEFSKMVLPE-KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 777 --~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.........+....... ......+.... .....+.+..+.+++.+||+.||++|||+.||++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~ 305 (326)
T 3uim_A 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQ--------------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305 (326)
T ss_dssp HTTTSCSBHHHHHTTTTSSCCSTTSSCTTCT--------------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred cccccchhHHHHHHHHhhchhhhhhcChhhc--------------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHH
Confidence 12223333343333222 22333332221 12234677889999999999999999999999999
Q ss_pred HHHH
Q 002897 854 LCAA 857 (869)
Q Consensus 854 L~~~ 857 (869)
|++.
T Consensus 306 L~~~ 309 (326)
T 3uim_A 306 LEGD 309 (326)
T ss_dssp HHTS
T ss_pred hcCc
Confidence 9753
No 50
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.5e-42 Score=366.19 Aligned_cols=268 Identities=23% Similarity=0.382 Sum_probs=210.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHh--CCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRS--IRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||+||+|++ +|+.||||++... ....+..|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 46899999999999999999998 7999999998643 33556667777766 7999999999987653 334467
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeecCCC
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH--------HHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
.++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 89999999999999999654 3899999999999999999999 77 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC------CCCccccchhhhHHHHHHHcC-------
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS------EASMTGDVYSFGILLLEMFSR------- 769 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~el~tg------- 769 (869)
.+||+|||+|+......... ........||+.|+|||++.+. .+++++|||||||++|||++|
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~ 226 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQL----DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226 (301)
T ss_dssp CEEECCCTTCEEEETTTTEE----ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CEEEeeCCCeeecccccccc----cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccc
Confidence 99999999997665432111 1122345799999999998876 455799999999999999999
Q ss_pred ---CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 770 ---RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 770 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+.||........................... .......++..+.+++.+||+.||++|||
T Consensus 227 ~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps 289 (301)
T 3q4u_A 227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP-----------------NRWFSDPTLTSLAKLMKECWYQNPSARLT 289 (301)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC-----------------GGGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred ccccccccccCCCCcchhhhhHHHhccCCCCCCC-----------------hhhccCccHHHHHHHHHHHhhcChhhCCC
Confidence 7787655444444333333222111111111 11122356788999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002897 847 MRDVVVKLCAA 857 (869)
Q Consensus 847 ~~evl~~L~~~ 857 (869)
+.||++.|+++
T Consensus 290 ~~~i~~~L~~i 300 (301)
T 3q4u_A 290 ALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999875
No 51
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.8e-43 Score=371.71 Aligned_cols=282 Identities=26% Similarity=0.428 Sum_probs=214.1
Q ss_pred hcCCCCCCeeeeecceEEEEEE----ECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGI----IGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||+||+|+ +..+++.||||++........+.+.+|++++++++||||+++++++... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 4689999999999999999999 4568999999999877666678899999999999999999999997543 22
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 457999999999999999987653 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||++......... ........++..|+|||++.+..++.++|||||||++|||++|..||...... +..
T Consensus 158 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~------~~~ 226 (295)
T 3ugc_A 158 FGLTKVLPQDKEF-----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMR 226 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH------HHH
T ss_pred CcccccccCCcce-----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH------HHh
Confidence 9999876543211 12223345788899999999889999999999999999999999998643211 111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
..................... ....+.+..++..+.+++.+||+.||++|||++|+++.|+++++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 227 MIGNDKQGQMIVFHLIELLKN------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp HHCTTCCTHHHHHHHHHHHHT------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred hhcCccccchhHHHHHHHHhc------cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 110000000000000001100 11111223456778999999999999999999999999999988753
No 52
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.1e-42 Score=370.35 Aligned_cols=285 Identities=24% Similarity=0.299 Sum_probs=213.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||+||+|++ .++.||||++..... .......|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEE--CCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 46899999999999999999998 589999999965433 3345567899999999999999999987642 2235679
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCceeecCCCcEE
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC-------KPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
+||||+++|+|.++++... +++..++.++.|+++||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 99 lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANV-------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 9999999999999997753 899999999999999999999851 33799999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----CCCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----EASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
|+|||.|+....... ........||+.|+|||++.+. .++.++|||||||++|||+||+.||.......
T Consensus 172 L~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 245 (322)
T 3soc_A 172 IADFGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245 (322)
T ss_dssp ECCCTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred EccCCcccccccccC------ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence 999999987654321 1223345799999999998863 45678899999999999999999997643321
Q ss_pred ch-HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 781 LT-LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 781 ~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
.. ........ ....+ +.....................++..+.+++.+||+.||++|||+.||++.|+++.+
T Consensus 246 ~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 246 MLPFEEEIGQH--PSLED-----MQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CCTTHHHHCSS--CCHHH-----HHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchhhhhccC--Cchhh-----hhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11 00000000 00000 000000000000001111223566779999999999999999999999999999987
Q ss_pred hh
Q 002897 860 AF 861 (869)
Q Consensus 860 ~~ 861 (869)
..
T Consensus 319 ~~ 320 (322)
T 3soc_A 319 LT 320 (322)
T ss_dssp HC
T ss_pred Hh
Confidence 53
No 53
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.4e-41 Score=364.75 Aligned_cols=263 Identities=22% Similarity=0.302 Sum_probs=214.0
Q ss_pred CcccHHHHHHHhcC----------CCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCC
Q 002897 542 PMISYAKLSKATSE----------FSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHR 611 (869)
Q Consensus 542 ~~~~~~~~~~~~~~----------y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 611 (869)
+.++++++..+++. |...++||+|+||.||+|++..+|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 55777777777754 66678999999999999999889999999999876666667899999999999999
Q ss_pred ccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 002897 612 NLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDL 691 (869)
Q Consensus 612 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 691 (869)
||+++++++... ...++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||
T Consensus 103 niv~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 103 NVVEMYKSYLVG-----EELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp TBCCEEEEEEET-----TEEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred CcceEEEEEEEC-----CEEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 999999997654 6789999999999999998754 389999999999999999999999 9999999
Q ss_pred CCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCC
Q 002897 692 KPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRR 771 (869)
Q Consensus 692 kp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~ 771 (869)
||+||+++.++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 239 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKDV--------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSSS--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccCc--------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998765432 12234579999999999999999999999999999999999999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||...... ......... ..+.. ......+..+.+++.+||+.||++|||++|++
T Consensus 240 pf~~~~~~-----~~~~~~~~~-----~~~~~----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 293 (321)
T 2c30_A 240 PYFSDSPV-----QAMKRLRDS-----PPPKL----------------KNSHKVSPVLRDFLERMLVRDPQERATAQELL 293 (321)
T ss_dssp TTTTSCHH-----HHHHHHHHS-----SCCCC----------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCHH-----HHHHHHhcC-----CCCCc----------------CccccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 99643211 111111000 00000 00112345678999999999999999999998
Q ss_pred HH
Q 002897 852 VK 853 (869)
Q Consensus 852 ~~ 853 (869)
+.
T Consensus 294 ~h 295 (321)
T 2c30_A 294 DH 295 (321)
T ss_dssp TS
T ss_pred cC
Confidence 73
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.2e-42 Score=368.07 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=206.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.+.||+|+||.||+|++..+|+.||||++... .....+++.+|+++++.++||||+++++++.. ..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~-----~~ 87 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET-----EK 87 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CC
Confidence 346899999999999999999999989999999999654 33455778899999999999999999999764 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 88 TLYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECST
T ss_pred EEEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeec
Confidence 8999999999999999997754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCC-ccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEAS-MTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|++...... .......||+.|+|||++.+..++ .++||||+||++|+|++|+.||.... ......
T Consensus 159 G~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~ 224 (328)
T 3fe3_A 159 GFSNEFTVG---------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRE 224 (328)
T ss_dssp TCCGGGSSS---------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH
T ss_pred cCceecCCC---------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHH
Confidence 999765432 223445799999999999888764 79999999999999999999997532 112221
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
........ .+...+..+.+++.+||+.||++|||++|+++.
T Consensus 225 ~i~~~~~~------------------------~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 225 RVLRGKYR------------------------IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHCCCC------------------------CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHhCCCC------------------------CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111000 001123457799999999999999999999863
No 55
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-41 Score=380.30 Aligned_cols=398 Identities=22% Similarity=0.295 Sum_probs=158.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCC-------------CEEEccCCccCccCCccccC
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSAL-------------QVIDIRGNRLGGKIPDTLGQ 68 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~L~~n~i~~~~p~~~~~ 68 (869)
|++++|++ |+||..++ .+++|++|++++|.+++.+|.+++++.+| ++|++++|.+++ +|..
T Consensus 16 L~l~~n~l-~~iP~~i~-~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~--- 89 (454)
T 1jl5_A 16 PLRHSSNL-TEMPVEAE-NVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL--- 89 (454)
T ss_dssp --------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---
T ss_pred hhcccCch-hhCChhHh-cccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---
Confidence 45555555 35555553 45555555555555555555555555543 555555555552 3331
Q ss_pred CCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEE
Q 002897 69 LRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELL 148 (869)
Q Consensus 69 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 148 (869)
.++|++|+|++|++++ +|.. +++|++|++++|++. .+|.. .++|++|++++|++++ +| .|+++++|++|
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L 158 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKII 158 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEE
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEE
Confidence 2455555555555553 3332 245555555555554 33310 1455555555555554 33 35555555555
Q ss_pred EccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEE
Q 002897 149 ELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTID 228 (869)
Q Consensus 149 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~ 228 (869)
++++|+++++. .. ..+|++|++++|+++.++ .+.++++|++|++++|++++ +|... ..|+.|+
T Consensus 159 ~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~ 221 (454)
T 1jl5_A 159 DVDNNSLKKLP-DL---PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK-LPDLP----LSLESIV 221 (454)
T ss_dssp ECCSSCCSCCC-CC---CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCCCC----TTCCEEE
T ss_pred ECCCCcCcccC-CC---cccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc-CCCCc----CcccEEE
Confidence 55555554422 11 235555555555555433 14455555555555555553 22211 1255555
Q ss_pred ecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccc
Q 002897 229 IGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQG 308 (869)
Q Consensus 229 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 308 (869)
+++|.++ .+| .+..+++|++|++++|++.+ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++
T Consensus 222 l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 222 AGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred CcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 5555555 334 25555555555555555542 2221 2455555555555553 2222 2445555555555543
Q ss_pred cCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCcccc
Q 002897 309 KIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLS 388 (869)
Q Consensus 309 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 388 (869)
+|.. .++|+.|++++|++++ ++ .....++.|++++|++++ +|.. +++|++|++++|.++ .+|.
T Consensus 292 -l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~--- 354 (454)
T 1jl5_A 292 -LSEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE--- 354 (454)
T ss_dssp -ESCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---
T ss_pred -ccCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---
Confidence 1110 1345555555555542 11 111234445555555543 3322 244555555555554 2333
Q ss_pred CCCCCcEEEeeCccccC--CCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcc--cCCCCCccCCC
Q 002897 389 ACTSLEYVKMQDNSFSG--SIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEG--EVPKKGVFSNK 464 (869)
Q Consensus 389 ~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~~~~~~~~~~ 464 (869)
.+++|++|++++|++++ .+|.+++. |+.|.+.+.+|.. +++|+.|++++|++++ .+|. .+
T Consensus 355 ~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~-----sl 418 (454)
T 1jl5_A 355 LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE-----SV 418 (454)
T ss_dssp CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC----------------------------------------
T ss_pred hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh-----hH
Confidence 24455555555555554 33333322 1223333344432 2789999999999987 4443 34
Q ss_pred ccccccCCcccC
Q 002897 465 TRFSLSGNGKLC 476 (869)
Q Consensus 465 ~~~~~~~n~~~c 476 (869)
..+.+.+|...|
T Consensus 419 ~~L~~~~~~~~~ 430 (454)
T 1jl5_A 419 EDLRMNSERVVD 430 (454)
T ss_dssp ------------
T ss_pred hheeCcCcccCC
Confidence 556666665444
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.1e-42 Score=367.52 Aligned_cols=263 Identities=27% Similarity=0.385 Sum_probs=202.5
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP-----P 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-----T
T ss_pred ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----C
Confidence 456899999999999999999988 78999999986443 34456789999999999999999999997543 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEEc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
..++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~ 181 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAR---EQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVC 181 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHH---HHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEEC
T ss_pred ceEEEEecCCCCcHHHHHhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEEC
Confidence 789999999999999999875421 2389999999999999999999999 8 9999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...
T Consensus 182 Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~ 248 (309)
T 3p86_A 182 DFGLSRLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVV 248 (309)
T ss_dssp CCC-------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHH
T ss_pred CCCCCccccccc--------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 999997544321 2233456899999999999999999999999999999999999999753221 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
........ ....+..++..+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 249 ~~~~~~~~----------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 249 AAVGFKCK----------------------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp HHHHHSCC----------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred HHHHhcCC----------------------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 11000000 000011234568899999999999999999999999999877543
No 57
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=369.12 Aligned_cols=266 Identities=26% Similarity=0.407 Sum_probs=210.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC---eEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG---MLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||+||+|.+..++ ..||||+++.. .....+.+.+|+.++++++||||+++++++...
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG----- 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 357889999999999999999997544 45999999754 334457789999999999999999999997553
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.++++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 678999999999999999976543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||+++......... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 195 fg~a~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~ 264 (325)
T 3kul_A 195 FGLSRVLEDDPDAA-----YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVI 264 (325)
T ss_dssp CSSCEECC----CC-----EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHH
T ss_pred CCcccccccCccce-----eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHH
Confidence 99998775543211 12233456788999999988889999999999999999999 99999653221 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
....... ..+.+..++..+.+++.+||+.||++|||+.||++.|+++.+...+.
T Consensus 265 ~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 265 SSVEEGY-----------------------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp HHHHTTC-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred HHHHcCC-----------------------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 1111000 00011134567889999999999999999999999999998775544
No 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.4e-42 Score=363.41 Aligned_cols=268 Identities=22% Similarity=0.382 Sum_probs=210.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.++++++||||+++++++.. .+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEE-----DD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEEC-----SS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeee-----CC
Confidence 36799999999999999999999999999999998543 23445788999999999999999999999754 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... ++++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeC
Confidence 8899999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+........ .......||+.|+|||++.+..++.++||||+||++|+|++|+.||........ ....
T Consensus 156 g~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----~~~~ 224 (294)
T 4eqm_A 156 GIAKALSETSL-------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI----AIKH 224 (294)
T ss_dssp SSSTTC--------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH----HHHH
T ss_pred CCccccccccc-------cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHH
Confidence 99986644321 222345689999999999999999999999999999999999999975322111 1111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHhhhccc
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-QMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~~~ 865 (869)
. .... +.... ....+++..+.+++.+||+.||++|| +++++.+.|..+........
T Consensus 225 ~-~~~~-----~~~~~--------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~ 281 (294)
T 4eqm_A 225 I-QDSV-----PNVTT--------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281 (294)
T ss_dssp H-SSCC-----CCHHH--------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred h-hccC-----CCcch--------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence 1 0000 00000 00113456788999999999999998 89999999988766544433
No 59
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=371.15 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=197.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..++|++.+.||+|+||+||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++... ..
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA-----NK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS-----SE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC-----CE
Confidence 4578999999999999999999999999999999996543 23346789999999999999999999997653 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 999999999999999997654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|........ .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.... .......
T Consensus 154 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~ 221 (347)
T 3zgw_A 154 LCAKPKGNKD-------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKK 221 (347)
T ss_dssp TCBC---------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred CcccccCCCC-------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHH
Confidence 9876543221 22344579999999999988775 899999999999999999999997532 1111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... .+...+..+.+++.+||+.||++|||++|+++.
T Consensus 222 i~~~~~~------------------------~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 222 IMRGKYD------------------------VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp HHHTCCC------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHcCCCC------------------------CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1111000 001123457789999999999999999999874
No 60
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.6e-41 Score=371.34 Aligned_cols=268 Identities=23% Similarity=0.376 Sum_probs=213.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-------CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-------ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999873 356789999997543 34457889999999999 899999999997543
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
+..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 160 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 -----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred -----CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 6789999999999999999876421 1123489999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||+|+........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p 305 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred hhEEECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999876543211 12233457889999999999999999999999999999999 9999
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|...... +......... ....+..++..+.+++.+||+.||++|||+.|+++
T Consensus 306 ~~~~~~~-----~~~~~~~~~~-----------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 306 YPGIPVE-----ELFKLLKEGH-----------------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp STTCCGG-----GHHHHHHTTC-----------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHH-----HHHHHHhcCC-----------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9753221 1111110000 00011134456889999999999999999999999
Q ss_pred HHHHHHHhhh
Q 002897 853 KLCAAREAFV 862 (869)
Q Consensus 853 ~L~~~~~~~~ 862 (869)
.|+++.....
T Consensus 358 ~L~~il~~~~ 367 (370)
T 2psq_A 358 DLDRILTLTT 367 (370)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999887643
No 61
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-41 Score=361.85 Aligned_cols=265 Identities=26% Similarity=0.435 Sum_probs=205.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|.+. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred ccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc------Cc
Confidence 468999999999999999999874 35889988643 33445788999999999999999999998643 45
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 7899999999999999976543 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
+|........ ........||+.|+|||++. +..++.++|||||||++|||++|+.||..............
T Consensus 178 ~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~ 251 (307)
T 3lb7_A 178 LATVKSRWSG------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVG 251 (307)
T ss_dssp SSCC------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH
T ss_pred Cceecccccc------cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHh
Confidence 9976543211 12223456999999999875 56789999999999999999999999975432211111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
.......... ....++..+.+++.+||+.||++|||+.|+++.|+.+...+..
T Consensus 252 ~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 252 RGYASPDLSK-----------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp HTCCCCCSTT-----------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred cCCCCcchhh-----------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 1111110000 0113456788999999999999999999999999999877643
No 62
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.3e-41 Score=377.94 Aligned_cols=390 Identities=25% Similarity=0.316 Sum_probs=257.7
Q ss_pred ChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCC-------------CEEeCcCc
Q 002897 14 PVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKL-------------IYLNIGRN 80 (869)
Q Consensus 14 p~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L-------------~~L~L~~n 80 (869)
|.++ ..++|++|++++|.+ +.+|.+|+++++|++|++++|++.+.+|..++++++| ++|++++|
T Consensus 5 p~~~--~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~ 81 (454)
T 1jl5_A 5 PRNV--SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNL 81 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTS
T ss_pred cccc--ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCC
Confidence 4555 468999999999999 5999999999999999999999999999999999875 99999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
.+++ +|.. .++|++|++++|.+. .+|. .+++|++|++++|++++. +.. .++|++|++++|+++++ |
T Consensus 82 ~l~~-lp~~---~~~L~~L~l~~n~l~-~lp~----~~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~l-p 147 (454)
T 1jl5_A 82 GLSS-LPEL---PPHLESLVASCNSLT-ELPE----LPQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEKL-P 147 (454)
T ss_dssp CCSC-CCSC---CTTCSEEECCSSCCS-SCCC----CCTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSSC-C
T ss_pred cccc-CCCC---cCCCCEEEccCCcCC-cccc----ccCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCCC-c
Confidence 9885 3442 368999999999998 4773 247888999999988853 221 26899999999998874 4
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
.|..+++|++|++++|+++.++.. ..+|++|++++|++++ +| .+..+++ |+.|++++|.+++ +|.
T Consensus 148 -~~~~l~~L~~L~l~~N~l~~lp~~----------~~~L~~L~L~~n~l~~-l~-~~~~l~~-L~~L~l~~N~l~~-l~~ 212 (454)
T 1jl5_A 148 -ELQNSSFLKIIDVDNNSLKKLPDL----------PPSLEFIAAGNNQLEE-LP-ELQNLPF-LTAIYADNNSLKK-LPD 212 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSCCCCC----------CTTCCEEECCSSCCSS-CC-CCTTCTT-CCEEECCSSCCSS-CCC
T ss_pred -ccCCCCCCCEEECCCCcCcccCCC----------cccccEEECcCCcCCc-Cc-cccCCCC-CCEEECCCCcCCc-CCC
Confidence 588899999999999988876532 2488999999998886 45 5777775 8899999998884 444
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSL 320 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 320 (869)
.. ++|++|++++|.+. .+| .++.+++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|
T Consensus 213 ~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L 279 (454)
T 1jl5_A 213 LP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSL 279 (454)
T ss_dssp CC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred Cc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcC
Confidence 32 57888899998887 566 48888889999999998885 4432 3778888999888884 5543 3788
Q ss_pred ceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCC-ccccccccccccccccCCccccCCCCCcEEEee
Q 002897 321 IMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNL-KNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQ 399 (869)
Q Consensus 321 ~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 399 (869)
+.|++++|++++ +|. ....++.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|+.|+++
T Consensus 280 ~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~ 345 (454)
T 1jl5_A 280 TFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIAS 345 (454)
T ss_dssp CEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CEEECcCCccCc-ccC----cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECC
Confidence 888999888875 221 22456788888888874 22 23 478888888888885 5553 5788888888
Q ss_pred CccccCCCCccccccccccEEEccCCcccC--CCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccC
Q 002897 400 DNSFSGSIPPSLNFLKSIKVLDLSSNKLSG--QIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLC 476 (869)
Q Consensus 400 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 476 (869)
+|+++ .+|. .+++|++|++++|++++ .+|..+.. ++.|.+.+.+|.. +.+++.+++++|+...
T Consensus 346 ~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~--~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 346 FNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL--PQNLKQLHVETNPLRE 410 (454)
T ss_dssp SSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------
T ss_pred CCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc--cCcCCEEECCCCcCCc
Confidence 88888 5666 46888888888888887 56665543 3456777777663 5788999999997654
No 63
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.6e-41 Score=356.87 Aligned_cols=284 Identities=30% Similarity=0.455 Sum_probs=225.0
Q ss_pred CCCcccHHHHHHHhcCCCCC------CeeeeecceEEEEEEECCCCeEEEEEEeecc----cchhhHHHHHHHHHHHhCC
Q 002897 540 QFPMISYAKLSKATSEFSSS------NMVGQGSFGTVFKGIIGENGMLVAVKVLNLM----QKGALKSFLTECEALRSIR 609 (869)
Q Consensus 540 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 609 (869)
..+.+++.++..++++|... ++||+|+||.||+|.+ +++.||||++... .....+.+.+|+.+++.++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 45678899999999998877 9999999999999997 7899999998642 2344578899999999999
Q ss_pred CCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 002897 610 HRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHG 689 (869)
Q Consensus 610 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 689 (869)
||||+++++++... +..++||||+++|+|.+++..... ..++++..++.++.|++.||+|||+. +|+||
T Consensus 89 h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~ 157 (307)
T 2nru_A 89 HENLVELLGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHEN---HHIHR 157 (307)
T ss_dssp CTTBCCEEEEECSS-----SSCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeEEEEEEEecC-----CceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence 99999999997543 678999999999999999975432 23489999999999999999999999 99999
Q ss_pred CCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcC
Q 002897 690 DLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSR 769 (869)
Q Consensus 690 Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg 769 (869)
||||+||+++.++.+||+|||.+......... .......||+.|+|||.+.+ .++.++|||||||++|+|++|
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g 230 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQT------VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSSC------EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHEEEcCCCcEEEeeccccccccccccc------ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHC
Confidence 99999999999999999999999876543211 12234568999999998865 588999999999999999999
Q ss_pred CCCCCcCccCCchHHHhhhhhc--ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 770 RRPTDSMFHEGLTLHEFSKMVL--PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 770 ~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
+.||........ ...+..... ...+.+.+++.+ ......++..+.+++.+||+.||++|||+
T Consensus 231 ~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 294 (307)
T 2nru_A 231 LPAVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKM---------------NDADSTSVEAMYSVASQCLHEKKNKRPDI 294 (307)
T ss_dssp CCSBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSC---------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred CCCcccCcchHH-HHHHHHHhhhhhhhhhhhccccc---------------cccchHHHHHHHHHHHHHcCCCcccCcCH
Confidence 999976433321 112211111 111122222111 11234567789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 002897 848 RDVVVKLCAARE 859 (869)
Q Consensus 848 ~evl~~L~~~~~ 859 (869)
.||++.|+++.+
T Consensus 295 ~~l~~~L~~l~~ 306 (307)
T 2nru_A 295 KKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 64
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-41 Score=361.34 Aligned_cols=285 Identities=19% Similarity=0.238 Sum_probs=216.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.++||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++... +....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC---CCceE
Confidence 367999999999999999999999899999999997533 33457788999999999999999999987643 23578
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL----DHDMVAHVG 707 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 707 (869)
++||||+++|+|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEc
Confidence 9999999999999999875431 2389999999999999999999999 99999999999999 788889999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccC--------CCCCCccccchhhhHHHHHHHcCCCCCCcCccC
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT--------GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~ 779 (869)
|||.|+...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 159 Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 229 (319)
T 4euu_A 159 DFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (319)
T ss_dssp CCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCG
T ss_pred cCCCceecCCCC---------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 999998765432 223456899999999875 567899999999999999999999999753332
Q ss_pred CchHHHh---hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 780 GLTLHEF---SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 780 ~~~~~~~---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
....... .....+.......... ........ ............+..+.+++.+||+.||++|||++|+++....
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 230 RRNKEVMYKIITGKPSGAISGVQKAE-NGPIDWSG--DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp GGCHHHHHHHHHHCCTTCCEEEECST-TCCEEEES--SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred chhHHHHHHHhcCCCcccchhhhccc-CCccccCc--cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 2221111 1111111111111000 00000000 0001112335677889999999999999999999999998876
Q ss_pred HH
Q 002897 857 AR 858 (869)
Q Consensus 857 ~~ 858 (869)
..
T Consensus 307 ~~ 308 (319)
T 4euu_A 307 IL 308 (319)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 65
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.4e-41 Score=367.08 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=206.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch------hhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG------ALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||+||+|++..+|+.||+|+++..... ..+.+.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 86 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN---- 86 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe----
Confidence 46799999999999999999999999999999999754321 34678999999999999999999999754
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---- 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 702 (869)
....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++
T Consensus 87 -~~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 87 -RTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -SSEEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred -CCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 378999999999999999997654 389999999999999999999999 999999999999998877
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||......
T Consensus 157 ~vkl~DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--- 224 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--- 224 (361)
T ss_dssp CEEECCCSSCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---
T ss_pred CEEEEecCCceEcCCCC---------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---
Confidence 79999999998765432 223456999999999999989999999999999999999999999753211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........... ..++ ......+..+.+++.+||..||++|||+.|+++
T Consensus 225 --~~~~~i~~~~~--~~~~------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 --ETLANITAVSY--DFDE------------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp --HHHHHHHTTCC--CCCH------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --HHHHHHHhcCC--CCCc------------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111110000 0000 111133456889999999999999999999985
No 66
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.8e-41 Score=364.75 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=205.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|+.+++.++||||+++++++... +
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~-----~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----D 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC-----C
Confidence 36799999999999999999999999999999999753 234457789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 8999999999999999998654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 150 G~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~ 216 (337)
T 1o6l_A 150 GLCKEGISDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFEL 216 (337)
T ss_dssp TTCBCSCCTT--------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred cchhhcccCC--------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHHH
Confidence 9997543221 223456799999999999999999999999999999999999999964321 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
....... .+...+..+.+++.+||+.||++|| +++|+++
T Consensus 217 i~~~~~~------------------------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 217 ILMEEIR------------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHCCCC------------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHcCCCC------------------------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1111000 0012345678999999999999999 8999876
No 67
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-41 Score=363.14 Aligned_cols=253 Identities=17% Similarity=0.274 Sum_probs=207.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||+||+|++..+++.||+|++.... .....+.+|+.+++.++||||+++++++.+. +..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESM-----EELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEET-----TEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecC-----CEEE
Confidence 468999999999999999999999999999999986443 3446788999999999999999999997654 7899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--CCcEEEcccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH--DMVAHVGDFG 710 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg 710 (869)
+||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAF-----ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 99999999999999976543 389999999999999999999999 9999999999999987 7899999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||...... ......
T Consensus 150 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i 215 (321)
T 1tki_A 150 QARQLKPGD---------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIENI 215 (321)
T ss_dssp TCEECCTTC---------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHH
T ss_pred CCeECCCCC---------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHHHH
Confidence 998765432 223456899999999999888999999999999999999999999753221 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... . .......++.++.+++.+||+.||++|||+.|+++.
T Consensus 216 ~~~~~~--~------------------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 216 MNAEYT--F------------------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHTCCC--C------------------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HcCCCC--C------------------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 100000 0 001112345678899999999999999999999884
No 68
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-42 Score=375.25 Aligned_cols=263 Identities=27% Similarity=0.395 Sum_probs=211.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++... ..
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS-----SS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC-----CC
Confidence 3467889999999999999999998899999999986442 23345688999999999999999999997543 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred cEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCC
Confidence 8999999999999999986543 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+....... ........++..|+|||++.++.++.++|||||||++|||++ |..||...... .....
T Consensus 259 ~s~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~ 327 (377)
T 3cbl_A 259 MSREEADGVY------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREF 327 (377)
T ss_dssp GCEECTTSEE------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHH
T ss_pred CceecCCCce------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH
Confidence 9986543210 011122345778999999988889999999999999999998 99998753221 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
..... ..+.++.++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 328 ~~~~~-----------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 328 VEKGG-----------------------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp HHTTC-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHcCC-----------------------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 10000 00111234567889999999999999999999999999998753
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-41 Score=363.43 Aligned_cols=255 Identities=20% Similarity=0.290 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----CeE
Confidence 468999999999999999999999999999999996433 22346688999999999999999999997653 788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999997654 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ ........||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+....
T Consensus 152 a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 225 (323)
T 3tki_A 152 ATVFRYNNR------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (323)
T ss_dssp CEECEETTE------ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC
T ss_pred cceeccCCc------ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc
Confidence 986543221 122334679999999999987775 7789999999999999999999976443323222222211
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... .....++..+.+++.+||+.||++|||++|+++.
T Consensus 226 ~~~--------------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 226 TYL--------------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTS--------------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccC--------------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000 0011234567799999999999999999999763
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.5e-41 Score=369.98 Aligned_cols=263 Identities=26% Similarity=0.429 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|++. .++..||||+++.. .....+.+.+|+.++++++||||+++++++...
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS----- 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----
Confidence 358999999999999999999986 46778999999754 334457899999999999999999999997543
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.++++.... .+++.+++.++.||++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 190 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECc
Confidence 678999999999999999987543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||+++......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 191 fg~a~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~ 260 (373)
T 2qol_A 191 FGLGRVLEDDPEAA-----YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVI 260 (373)
T ss_dssp C---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHH
T ss_pred CccccccccCCccc-----eeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence 99998765432110 11222345778999999998899999999999999999998 9999965321 1111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
....... . .+.+..++..+.+++.+||+.||++||++.||++.|+++.+..
T Consensus 261 ~~i~~~~-~----------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 261 KAVDEGY-R----------------------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHTTE-E----------------------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHcCC-C----------------------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 1111000 0 0001134456889999999999999999999999999987654
No 71
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.4e-41 Score=355.82 Aligned_cols=277 Identities=19% Similarity=0.272 Sum_probs=204.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.++||+|+||+||+|++..+|+.||||+++... ......+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-----KKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC-----CEE
Confidence 57899999999999999999999999999999996433 33457788999999999999999999997653 788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++ ++.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG-----DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999976 66666655433 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... .......||+.|+|||++.+.. ++.++||||+||++|+|++|..||..............+..
T Consensus 148 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~ 219 (292)
T 3o0g_A 148 ARAFGIPV--------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL 219 (292)
T ss_dssp CEECCSCC--------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHH
T ss_pred ceecCCcc--------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHh
Confidence 98764332 2234457899999999987766 79999999999999999999888643222222222222211
Q ss_pred cccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.................... ...............+..+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 220 GTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 11100000000000000000 000000001111234567889999999999999999999986
No 72
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.9e-41 Score=356.44 Aligned_cols=274 Identities=16% Similarity=0.197 Sum_probs=217.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++.+ +|++++++++++... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG-----LHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEET-----TEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCC-----cee
Confidence 467999999999999999999998899999999986433 235678899999999 799999999997543 788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-----EEE
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV-----AHV 706 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl 706 (869)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 9999999987543 389999999999999999999999 9999999999999987776 999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch--HH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT--LH 784 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~--~~ 784 (869)
+|||.++............ ........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHIP-YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYE 231 (298)
T ss_dssp CCCTTCEESBCTTTCCBCC-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHH
T ss_pred EECcccccccccccccccc-ccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHH
Confidence 9999998776543221111 12234567999999999999999999999999999999999999999764322111 01
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
........... ......++..+.+++.+||+.||++|||++||++.|+++.+.....
T Consensus 232 ~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 232 RIGEKKQSTPL-----------------------RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp HHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHhhccCccH-----------------------HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 11000000000 0001134567889999999999999999999999999998876554
Q ss_pred cC
Q 002897 865 QD 866 (869)
Q Consensus 865 ~~ 866 (869)
.+
T Consensus 289 ~~ 290 (298)
T 1csn_A 289 ED 290 (298)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 73
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.6e-41 Score=362.90 Aligned_cols=274 Identities=19% Similarity=0.214 Sum_probs=215.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++..... .+.+.+|+++++++ +||||+++++++... ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-----~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCG-----KYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEET-----TEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecC-----Ccc
Confidence 3679999999999999999999988999999999865432 34688999999999 999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-----EEE
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV-----AHV 706 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl 706 (869)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +||
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl 151 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDR-----TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHI 151 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEE
T ss_pred EEEEEeC-CCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEE
Confidence 9999999 9999999987533 389999999999999999999999 9999999999999999887 999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+|+........... .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.
T Consensus 152 ~DFg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~ 228 (330)
T 2izr_A 152 IDFALAKEYIDPETKKHI-PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKER 228 (330)
T ss_dssp CCCTTCEESBCTTTCCBC-CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHH
T ss_pred EEcccceeeecCCCCccc-cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHH
Confidence 999999876544321111 0112345679999999999999999999999999999999999999998643221 1111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhccc
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 865 (869)
.......... ... ......++ .+.+++..||+.||.+||++++|.+.|+.+.+......
T Consensus 229 ~~~i~~~~~~--~~~-----------------~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 287 (330)
T 2izr_A 229 YQKIGDTKRA--TPI-----------------EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMF 287 (330)
T ss_dssp HHHHHHHHHH--SCH-----------------HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHhhhcc--CCH-----------------HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 1111000000 000 00001133 78899999999999999999999999999987765443
No 74
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-41 Score=362.99 Aligned_cols=248 Identities=25% Similarity=0.341 Sum_probs=202.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-----~ 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-----T 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 468999999999999999999999999999999996432 23346789999999999999999999997654 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+ +|+|.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 789999999 789999987654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|++...... .......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ ..
T Consensus 153 G~s~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~ 218 (336)
T 3h4j_B 153 GLSNIMTDG---------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FK 218 (336)
T ss_dssp SCTBTTTTS---------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BC
T ss_pred ccceeccCC---------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HH
Confidence 999865443 22234569999999999988776 7899999999999999999999975322110 00
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..... ....+...+..+.+++.+||+.||++|||++|+++.
T Consensus 219 ~i~~~------------------------~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 219 KVNSC------------------------VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCSS------------------------CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred HHHcC------------------------CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00000 000011234567899999999999999999999863
No 75
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=372.16 Aligned_cols=255 Identities=19% Similarity=0.268 Sum_probs=205.4
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
...++|++.+.||+|+||+||+|.+..+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+ .
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE-----E 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC-----S
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE-----C
Confidence 34578999999999999999999999999999999996543 3345678999999999999999999999764 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec---CCCcEE
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD---HDMVAH 705 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~k 705 (869)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred CEEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 78899999999999999998764 389999999999999999999999 999999999999998 467899
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||+|....... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .
T Consensus 154 L~DFG~a~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-----~ 220 (444)
T 3soa_A 154 LADFGLAIEVEGEQ--------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-----R 220 (444)
T ss_dssp ECCCSSCBCCCTTC--------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----H
T ss_pred EccCceeEEecCCC--------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-----H
Confidence 99999998665432 2223467999999999999999999999999999999999999999653211 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......... .... +....+++.+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~~~i~~~~~-~~~~-------------------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 221 LYQQIKAGAY-DFPS-------------------PEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHHHHTCC-CCCT-------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhCCC-CCCc-------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111110000 0000 001123456889999999999999999999987
No 76
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.1e-41 Score=356.88 Aligned_cols=275 Identities=22% Similarity=0.330 Sum_probs=203.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|++. +|+.||+|++.... ......+.+|++++++++||||+++++++.+ ...
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS-----ERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----SSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----CCE
Confidence 468999999999999999999996 69999999996432 2335678899999999999999999999754 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++ +|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCC-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 8999999975 88888876553 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.++...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ........
T Consensus 165 ~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~ 235 (311)
T 3niz_A 165 LARAFGIPV--------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI 235 (311)
T ss_dssp TCEETTSCC--------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH
T ss_pred CceecCCCc--------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 998764332 22234568999999999876 468999999999999999999999997644332 22222221
Q ss_pred hcc---cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLP---EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .......+......... ............+.+..++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTF-QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCC-CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhhhhccchhhhccc-ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111 11111111000000000 000000000111223457889999999999999999999986
No 77
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.8e-41 Score=351.74 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=209.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||+||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.+ ....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE-----QAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEec-----CCceE
Confidence 357889999999999999999997 688899999975433 23678999999999999999999999754 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 99999999999999977554 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .......
T Consensus 154 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~~ 221 (269)
T 4hcu_A 154 RFVLDDQY-------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDIS 221 (269)
T ss_dssp GGBCCHHH-------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHH
T ss_pred cccccccc-------ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHHh
Confidence 86644211 12233457889999999998899999999999999999999 99998753221 1111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.. . ... .+...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 222 ~~-~-~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 222 TG-F-RLY---------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp TT-C-CCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cC-c-cCC---------------------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 00 0 000 0012245678999999999999999999999999998764
No 78
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.6e-41 Score=369.81 Aligned_cols=286 Identities=18% Similarity=0.251 Sum_probs=214.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCC-----CeEEEEEEeecccchh-----------hHHHHHHHHHHHhCCCCccce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGEN-----GMLVAVKVLNLMQKGA-----------LKSFLTECEALRSIRHRNLIK 615 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 615 (869)
..++|++.+.||+|+||+||+|.+..+ ++.||||++....... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 345899999999999999999999754 5889999986543211 122345566677788999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSN 695 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 695 (869)
+++++... ..+....++||||+ +++|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|
T Consensus 113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 99998764 23346789999999 9999999987543 399999999999999999999999 99999999999
Q ss_pred eeec--CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCC
Q 002897 696 VLLD--HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 696 Ill~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
||++ .++.+||+|||+|+.+......... .........||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf 261 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY-AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPW 261 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCCS-SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred EEEecCCCCeEEEEECCcceecccCCccccc-ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 9999 8899999999999876543221111 112224456999999999999999999999999999999999999999
Q ss_pred CcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 774 DSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... ...............+..++.+ ....++..+.+++..||+.||++||++.++++.
T Consensus 262 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~ 323 (364)
T 3op5_A 262 EDNLKDP-KYVRDSKIRYRENIASLMDKCF-----------------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDI 323 (364)
T ss_dssp GGGTTCH-HHHHHHHHHHHHCHHHHHHHHS-----------------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred cccccCH-HHHHHHHHHhhhhHHHHHHHhc-----------------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 7533221 1111111111111111111100 001235678899999999999999999999999
Q ss_pred HHHHHHhhhcccC
Q 002897 854 LCAAREAFVSMQD 866 (869)
Q Consensus 854 L~~~~~~~~~~~~ 866 (869)
|+.+.+......+
T Consensus 324 l~~~~~~~~~~~~ 336 (364)
T 3op5_A 324 LLQGLKAIGSKDD 336 (364)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHHHHcCCCcC
Confidence 9999887655443
No 79
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=360.13 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=205.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch------hhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG------ALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 86 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK--- 86 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence 35689999999999999999999999999999999654321 357789999999999999999999997653
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---- 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 702 (869)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 87 --~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 87 --TDVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp --SEEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred --CEEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 78999999999999999997654 389999999999999999999999 999999999999999887
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
.+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .
T Consensus 156 ~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~ 225 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-T 225 (326)
T ss_dssp CEEECCCTTCEECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-H
T ss_pred CEEEEECCCCeECCCCC---------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-H
Confidence 89999999998765332 2234569999999999999899999999999999999999999996532110 1
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... .. ........+..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~~~~~----------~~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 226 LANVSAVNY----------EF--------------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHTCC----------CC--------------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhcCC----------Cc--------------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111100000 00 00111133456889999999999999999999987
No 80
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.5e-41 Score=367.89 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.++||+|+||.||+|+++.+++.||+|+++... ....+.+..|..+++++ +||||+++++++.+ .
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~-----~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC-----S
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE-----C
Confidence 468999999999999999999999999999999997542 23345678999999887 89999999999764 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 78999999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc----hHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL----TLH 784 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~----~~~ 784 (869)
||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 197 FGla~~~~~~~--------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~ 268 (396)
T 4dc2_A 197 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268 (396)
T ss_dssp CTTCBCCCCTT--------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH
T ss_pred cceeeecccCC--------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH
Confidence 99997532221 233456799999999999999999999999999999999999999964322110 111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
........... ..+...+..+.+++.+||+.||++||++
T Consensus 269 ~~~~~i~~~~~------------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 269 YLFQVILEKQI------------------------RIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHHHHHCCC------------------------CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHHHHHhcccc------------------------CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11111110000 0011234567899999999999999996
No 81
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-41 Score=371.95 Aligned_cols=277 Identities=22% Similarity=0.315 Sum_probs=217.8
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEE-----ECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEE
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGI-----IGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKII 617 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~ 617 (869)
...+.....++|++.+.||+|+||.||+|+ ...+++.||||+++... ....+.+.+|+++++++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 344555567899999999999999999998 45577999999997543 33456789999999999 799999999
Q ss_pred EEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcc-------------------------------------------
Q 002897 618 TICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL------------------------------------------- 654 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------- 654 (869)
+++... ....++||||+++|+|.+++.......
T Consensus 93 ~~~~~~----~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 93 GACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEECST----TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeecC----CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 997653 355899999999999999998764310
Q ss_pred -----------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCC
Q 002897 655 -----------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 655 -----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 717 (869)
....+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 011289999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 718 RPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 718 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
.... .......||+.|+|||++.+..++.++|||||||++|||++ |+.||................. ..
T Consensus 246 ~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~--- 315 (359)
T 3vhe_A 246 DPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RM--- 315 (359)
T ss_dssp CTTC------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-CC---
T ss_pred cccc------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC-CC---
Confidence 3211 22334568899999999998899999999999999999998 9999975432211111111100 00
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
..+..++..+.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 316 -----------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 316 -----------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp -----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -----------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 000123456889999999999999999999999999998764
No 82
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=363.96 Aligned_cols=296 Identities=22% Similarity=0.312 Sum_probs=209.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHH--HHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEA--LRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||+||+|++ +++.||||++..... ..+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999988 789999999965432 344445444 44589999999998776655566677
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceeecCCCcE
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC------KPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
.++||||+++|+|.+++.... .++..++.++.||++||+|||+.. .++|+||||||+||+++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 899999999999999997654 688999999999999999999862 3389999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-------CCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-------SEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
||+|||+|+.+...................||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 9999999987754432111111123345579999999999887 356778999999999999999987764322
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhccc-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNS-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
........+..........+. .......... ............++..+.+++.+||+.||++|||++|+++.|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFED----MQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHH----HHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHH----HHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 211100000000000000000 0000000000 00000011122466789999999999999999999999999999
Q ss_pred HHHhhhcc
Q 002897 857 AREAFVSM 864 (869)
Q Consensus 857 ~~~~~~~~ 864 (869)
+...+..-
T Consensus 316 ll~~~~~~ 323 (336)
T 3g2f_A 316 LMMIWERN 323 (336)
T ss_dssp HHHCCCC-
T ss_pred HHHHHHhc
Confidence 99877543
No 83
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.1e-40 Score=363.40 Aligned_cols=254 Identities=20% Similarity=0.316 Sum_probs=205.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-----~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----S 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----C
Confidence 3568999999999999999999999999999999996432 33456789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---VAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl 706 (869)
..++||||+++|+|.+++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.++ .+||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 8899999999999999997654 389999999999999999999999 999999999999998654 5999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...
T Consensus 173 ~DfG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~ 238 (362)
T 2bdw_A 173 ADFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRL 238 (362)
T ss_dssp CCCTTCBCCTTCC---------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH
T ss_pred eecCcceEecCCc---------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 9999998665332 22345799999999999998999999999999999999999999975321 111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
......... ... ......++..+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~i~~~~~-~~~-------------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 239 YAQIKAGAY-DYP-------------------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHHTCC-CCC-------------------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHhCCC-CCC-------------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111110000 000 00111334568899999999999999999999864
No 84
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=7.1e-41 Score=363.87 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=204.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
.++|++.+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---- 98 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD---- 98 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 357999999999999999999999999999999996432 11357789999999999999999999997653
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---E
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV---A 704 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~ 704 (869)
...++||||+++|+|.+++...... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +
T Consensus 99 -~~~~lv~e~~~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 99 -GMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp -TEEEEEEECCSSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred -CEEEEEEeCCCCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 7899999999999999888654211 12489999999999999999999999 9999999999999987654 9
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
||+|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.....
T Consensus 173 kl~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------ 238 (351)
T 3c0i_A 173 KLGGFGVAIQLGESG--------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------ 238 (351)
T ss_dssp EECCCTTCEECCTTS--------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------
T ss_pred EEecCcceeEecCCC--------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------
Confidence 999999998765432 123345799999999999999999999999999999999999999975211
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........... ..+ ......++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~i~~~~~--~~~------------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 239 RLFEGIIKGKY--KMN------------------PRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHHHHHHTCC--CCC------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCC--CCC------------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111110000 000 0011123467889999999999999999999986
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1e-40 Score=357.72 Aligned_cols=280 Identities=21% Similarity=0.321 Sum_probs=192.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||+||+|.+..+|+.||+|+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT-----ENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC-----TTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE-----CCeE
Confidence 468999999999999999999999899999999997543 2344778899999999999999999999654 3789
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ |+|.+++...........+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||.
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999998 59999987653222223489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..........
T Consensus 155 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~ 225 (317)
T 2pmi_A 155 ARAFGIPV--------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIM 225 (317)
T ss_dssp CEETTSCC--------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH
T ss_pred ceecCCCc--------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence 98764322 122345689999999998764 6899999999999999999999999754321 1111111111
Q ss_pred c--ccccccccCccchhhhhhcccccCC-C-----ccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 L--PEKVMEIVDPSLLLEVRANNSMSRG-G-----ERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~--~~~~~~~~d~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. +......... ...+......... . .....+..+..+.+++.+||+.||++|||++|+++
T Consensus 226 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 226 GTPNESLWPSVTK--LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp CSCCTTTCGGGGG--CTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCChhHhhhhhh--hhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 0000000000 0000000000000 0 00001123457889999999999999999999986
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=360.47 Aligned_cols=251 Identities=23% Similarity=0.354 Sum_probs=203.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+++++.++||||+++++++.+. .
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~-----~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE-----E 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 36799999999999999999999999999999999643 233457789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. ||+||||||+||+++.+|.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 8999999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC---CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG---SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
|+|...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 160 G~a~~~~~~---------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~ 228 (384)
T 4fr4_A 160 NIAAMLPRE---------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEI 228 (384)
T ss_dssp TTCEECCTT---------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHH
T ss_pred ceeeeccCC---------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHH
Confidence 999876543 22344679999999999864 45899999999999999999999999743222 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-MRDVVV 852 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 852 (869)
......... ..+..++..+.+++.+||+.||++||+ ++++.+
T Consensus 229 ~~~~~~~~~------------------------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 229 VHTFETTVV------------------------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHHHCCC------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHhhccc------------------------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111100000 001123456889999999999999998 666653
No 87
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-40 Score=354.84 Aligned_cols=278 Identities=25% Similarity=0.374 Sum_probs=209.5
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC--CCCccceEEEEeeccccCC
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI--RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~ 627 (869)
....++|++.+.||+|+||.||+|++ .|+.||||++.... ......|.+++... +||||+++++++... ...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~-~~~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKG-TGS 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES-CGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccC-CCC
Confidence 34457899999999999999999998 59999999986432 24455666666555 899999999997654 222
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeecCCC
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC-----KPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~ 702 (869)
....++||||+++|+|.++++... +++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCceEEEEeccCCCcHHHHhhccC-------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 367899999999999999997653 899999999999999999999752 34899999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCcc------ccchhhhHHHHHHHcC-------
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMT------GDVYSFGILLLEMFSR------- 769 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDvwslG~il~el~tg------- 769 (869)
.+||+|||+|.......... ........||+.|+|||++.+..++.+ +|||||||++|||+||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~ 255 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEV----DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIV 255 (337)
T ss_dssp CEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CEEEEeCCCceeeccccccc----cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccc
Confidence 99999999998765433211 111234579999999999988776665 9999999999999999
Q ss_pred ---CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 770 ---RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 770 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+.||......................... ........+++..+.+++.+||+.||++|||
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 318 (337)
T 3mdy_A 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPS-----------------FPNRWSSDECLRQMGKLMTECWAHNPASRLT 318 (337)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC-----------------CCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC
T ss_pred ccccccHhhhcCCCCchhhhHHHHhhhccCcc-----------------ccccchhhHHHHHHHHHHHHhhhhChhhCCC
Confidence 55554433332222222222111111110 1111223467888999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 002897 847 MRDVVVKLCAAREAF 861 (869)
Q Consensus 847 ~~evl~~L~~~~~~~ 861 (869)
+.||++.|+++.+..
T Consensus 319 ~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 319 ALRVKKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998764
No 88
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=366.87 Aligned_cols=250 Identities=26% Similarity=0.339 Sum_probs=200.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 627 (869)
..++|++.++||+|+||.||+|++..+|+.||||+++.. .....+.+.+|..+++.+ +||||+++++++.+.
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~---- 96 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP---- 96 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS----
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC----
Confidence 357899999999999999999999999999999999743 233456788999999988 799999999997653
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 97 -~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 97 -DRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred -CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 78999999999999999998754 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...
T Consensus 167 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~ 233 (353)
T 3txo_A 167 DFGMCKEGICNG--------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DLF 233 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred cccceeecccCC--------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 999997543221 2234567999999999998888999999999999999999999999753221 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM------RDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 852 (869)
......... .+...+..+.+++.+||+.||++||++ +|+++
T Consensus 234 ~~i~~~~~~------------------------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 234 EAILNDEVV------------------------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHCCCC------------------------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHcCCCC------------------------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111111000 001123457799999999999999998 66664
No 89
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-40 Score=364.57 Aligned_cols=253 Identities=18% Similarity=0.264 Sum_probs=206.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+..+|+.||+|++..........+.+|+++++.++||||+++++++.+ ....+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-----~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFED-----KYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----SSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe-----CCEEE
Confidence 4689999999999999999999999999999999976655556788999999999999999999999764 37899
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--CCcEEEcccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH--DMVAHVGDFG 710 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg 710 (869)
+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTC-----CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 99999999999999976543 389999999999999999999999 9999999999999974 4789999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+|+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 197 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~ 266 (387)
T 1kob_A 197 LATKLNPDE---------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCD 266 (387)
T ss_dssp TCEECCTTS---------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCC
T ss_pred cceecCCCc---------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC
Confidence 998765432 122346899999999999999999999999999999999999999753211 1111111100
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. ..++. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 267 ~------~~~~~------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 267 W------EFDED------------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp C------CCCSS------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred C------CCCcc------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 0 00000 11123456889999999999999999999987
No 90
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=356.60 Aligned_cols=281 Identities=21% Similarity=0.296 Sum_probs=206.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-----chhhHHHHHHHHHHHhC---CCCccceEEEEeecc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-----KGALKSFLTECEALRSI---RHRNLIKIITICSSI 623 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~ 623 (869)
..++|++.++||+|+||+||+|++..+|+.||||+++... ......+.+|+++++.+ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4679999999999999999999998899999999996432 12235677888887776 499999999998775
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
........++||||++ |+|.+++...... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 4444456899999997 5999999876532 389999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
+||+|||.|+..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ..
T Consensus 159 ~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~ 228 (308)
T 3g33_A 159 VKLADFGLARIYSYQ---------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QL 228 (308)
T ss_dssp EEECSCSCTTTSTTC---------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HH
T ss_pred EEEeeCccccccCCC---------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HH
Confidence 999999999865432 22234578999999999999999999999999999999999999997533221 11
Q ss_pred HHhhhhhccccccccc-CccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIV-DPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..............+. +........ ............++.+..+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 229 GKIFDLIGLPPEDDWPRDVSLPRGAF--PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHHCCCCTTTSCSSCSSCGGGS--CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHhCCCChhhccchhhcccccc--CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 1111111000000000 000000000 000000001111234567889999999999999999999986
No 91
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-40 Score=367.36 Aligned_cols=288 Identities=16% Similarity=0.169 Sum_probs=208.6
Q ss_pred HhcCCCCCCeeeee--cceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQG--SFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
..++|++.++||+| +||+||+|++..+|+.||||+++... ....+.+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 98 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD---- 98 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC----
Confidence 35689999999999 99999999999999999999997543 34457788999999999999999999997654
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 99 -~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 170 (389)
T 3gni_B 99 -NELWVVTSFMAYGSAKDLICTHFM----DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLS 170 (389)
T ss_dssp -TEEEEEEECCTTCBHHHHHHHTCT----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEEC
T ss_pred -CEEEEEEEccCCCCHHHHHhhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEc
Confidence 789999999999999999987532 2489999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|||.+........... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 171 dfg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 249 (389)
T 3gni_B 171 GLRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK 249 (389)
T ss_dssp CGGGCEECEETTEECS-CBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC
T ss_pred ccccceeecccccccc-ccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9999875533211110 01122334578999999999987 57899999999999999999999999764333222111
Q ss_pred hhhhhcccccc------ccc---------Cccchhhhhh---cccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 786 FSKMVLPEKVM------EIV---------DPSLLLEVRA---NNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 786 ~~~~~~~~~~~------~~~---------d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
.. ...+.... +.. .......... ..........+....++..+.+++.+||+.||++|||+
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta 328 (389)
T 3gni_B 250 LN-GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSA 328 (389)
T ss_dssp ---------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCH
T ss_pred hc-CCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCH
Confidence 11 11000000 000 0000000000 00000000111223455678999999999999999999
Q ss_pred HHHHHH
Q 002897 848 RDVVVK 853 (869)
Q Consensus 848 ~evl~~ 853 (869)
+|+++.
T Consensus 329 ~ell~h 334 (389)
T 3gni_B 329 STLLNH 334 (389)
T ss_dssp HHHTTS
T ss_pred HHHhcC
Confidence 999853
No 92
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.4e-41 Score=362.22 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=202.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeE----EEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGML----VAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
.++|++.++||+|+||+||+|++..+++. ||+|.++.. .....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 35799999999999999999999777765 577777533 23445789999999999999999999999865
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++|+||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred -CCeEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEc
Confidence 347899999999999999987654 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||+|+........ .......||..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 160 Dfg~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~ 231 (327)
T 3poz_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSI 231 (327)
T ss_dssp CTTHHHHHTTTCC-------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH
T ss_pred cCcceeEccCCccc------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHH
Confidence 99999876544211 22233457889999999999999999999999999999999 99999753322 11111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
...... ...+..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 232 ~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 232 LEKGER--------------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHTTCC--------------------------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHcCCC--------------------------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 111000 001112345688999999999999999999999999988653
No 93
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.4e-41 Score=349.76 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=208.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++++++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSK-----EYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCceE
Confidence 468999999999999999999986 788899999975433 33678999999999999999999999754 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 99999999999999987543 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .......
T Consensus 152 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~ 219 (268)
T 3sxs_A 152 RYVLDDQY-------VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVS 219 (268)
T ss_dssp EECCTTCE-------EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHH
T ss_pred eecchhhh-------hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHH
Confidence 87654321 12233456788999999988889999999999999999999 99998753221 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
... ... .+...+..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 220 ~~~--~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 220 QGH--RLY---------------------RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTC--CCC---------------------CCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred cCC--CCC---------------------CCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 000 000 0011234678999999999999999999999999988654
No 94
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.4e-40 Score=359.60 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=200.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|..+++++ +||||+++++++.+ .
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~-----~ 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT-----E 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----C
Confidence 35799999999999999999999999999999999754 233456788999999988 89999999999754 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|
T Consensus 83 ~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 83 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 78999999999999999998654 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC----chHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG----LTLH 784 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~----~~~~ 784 (869)
||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....
T Consensus 154 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 225 (345)
T 3a8x_A 154 YGMCKEGLRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225 (345)
T ss_dssp GGGCBCSCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH
T ss_pred ccccccccCCC--------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH
Confidence 99997543221 22345679999999999999999999999999999999999999996432111 0111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
........... ..+...+..+.+++.+||+.||++||++
T Consensus 226 ~~~~~i~~~~~------------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 226 YLFQVILEKQI------------------------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHHHHHHCCC------------------------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHHHHHHcCCC------------------------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 11111100000 0011234567899999999999999996
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.1e-41 Score=353.22 Aligned_cols=275 Identities=20% Similarity=0.297 Sum_probs=199.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||+||+|++ .+|+.||+|++.... ....+.+.+|++++++++||||+++++++... +..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK-----KRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS-----SCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC-----CeE
Confidence 5788999999999999999999 589999999986433 23347788999999999999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++ +|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999975 99999987543 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ......+..
T Consensus 147 ~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 217 (288)
T 1ob3_A 147 ARAFGIPV--------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRIL 217 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ccccCccc--------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHH
Confidence 98664321 122334689999999998764 58999999999999999999999997543211 111111111
Q ss_pred cccccccccCccchhhhhhccc-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNS-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
................+..... .............+..+.+++.+||+.||++|||++|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 218 GTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000000000000000 0000000111234566889999999999999999999975
No 96
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=368.49 Aligned_cols=269 Identities=24% Similarity=0.367 Sum_probs=210.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||+||+|++ ..+++.||||+++.. .......+.+|+.++++++||||+++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--- 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 35789999999999999999994 457789999999643 334456788999999999999999999997543
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL-EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM--- 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 702 (869)
...++||||+++|+|.+++....... ....+++.+++.++.||++||+|||++ +|+||||||+|||++.++
T Consensus 147 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 147 --LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred --CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 66799999999999999998754321 123489999999999999999999999 999999999999999655
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~ 781 (869)
.+||+|||+|+....... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 222 ~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--- 292 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGY------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--- 292 (367)
T ss_dssp CEEECCCHHHHHHHHHSS------CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred eEEECCCccccccccccc------cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH---
Confidence 599999999975432210 122234567899999999988899999999999999999998 9999975321
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
............ ...+..++..+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 293 --~~~~~~i~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 293 --QEVLEFVTSGGR-----------------------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp --HHHHHHHHTTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --HHHHHHHHcCCC-----------------------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111111111100 0011133456889999999999999999999999999987765
Q ss_pred hc
Q 002897 862 VS 863 (869)
Q Consensus 862 ~~ 863 (869)
..
T Consensus 348 ~~ 349 (367)
T 3l9p_A 348 DV 349 (367)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 97
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=353.46 Aligned_cols=252 Identities=21% Similarity=0.328 Sum_probs=197.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--------------------------hhhHHHHHHHHHHH
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--------------------------GALKSFLTECEALR 606 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 606 (869)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999864321 12356889999999
Q ss_pred hCCCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002897 607 SIRHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPV 686 (869)
Q Consensus 607 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 686 (869)
+++||||+++++++.+. .....++||||+++++|.+++... ++++.+++.++.|+++||+|||+. +|
T Consensus 92 ~l~h~~iv~~~~~~~~~---~~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDP---NEDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECS---SSSEEEEEEECCTTCBSCCSSCSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcC---CCCEEEEEEecCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 99999999999997652 246789999999999998765432 489999999999999999999999 99
Q ss_pred EecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC---CCccccchhhhHHH
Q 002897 687 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE---ASMTGDVYSFGILL 763 (869)
Q Consensus 687 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il 763 (869)
+||||||+||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l 230 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSS--------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCcccccccc--------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence 999999999999999999999999998765432 1223457999999999988765 47889999999999
Q ss_pred HHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC
Q 002897 764 LEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD 843 (869)
Q Consensus 764 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 843 (869)
|+|++|+.||..... ............ .. +....++..+.+++.+||+.||++
T Consensus 231 ~~l~~g~~pf~~~~~-----~~~~~~~~~~~~-~~---------------------~~~~~~~~~l~~li~~~l~~dp~~ 283 (298)
T 2zv2_A 231 YCFVFGQCPFMDERI-----MCLHSKIKSQAL-EF---------------------PDQPDIAEDLKDLITRMLDKNPES 283 (298)
T ss_dssp HHHHHSSCSSCCSSH-----HHHHHHHHHCCC-CC---------------------CSSSCCCHHHHHHHHHHTCSCTTT
T ss_pred HHHHHCCCCCCCccH-----HHHHHHHhcccC-CC---------------------CCccccCHHHHHHHHHHhhcChhh
Confidence 999999999964321 111111100000 00 000123456889999999999999
Q ss_pred CCCHHHHHH
Q 002897 844 RMQMRDVVV 852 (869)
Q Consensus 844 RPs~~evl~ 852 (869)
|||+.|+++
T Consensus 284 R~s~~e~l~ 292 (298)
T 2zv2_A 284 RIVVPEIKL 292 (298)
T ss_dssp SCCHHHHTT
T ss_pred CCCHHHHhc
Confidence 999999975
No 98
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.2e-40 Score=350.05 Aligned_cols=274 Identities=20% Similarity=0.251 Sum_probs=215.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++..... .+.+.+|+.+++.++|++++..+.++... ....+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCC----CCceE
Confidence 4689999999999999999999988999999999865432 35688999999999998888777766442 36789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGDF 709 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 709 (869)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 8999999985543 389999999999999999999999 99999999999999 48889999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC--chHHHhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG--LTLHEFS 787 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~--~~~~~~~ 787 (869)
|.+............ .........||+.|+|||++.+..++.++|||||||++|+|++|+.||....... .......
T Consensus 153 g~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 3uzp_A 153 GLAKKYRDARTHQHI-PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp TTCEECBCTTTCCBC-CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CCccccccccccccc-ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence 999877654321111 0122345679999999999999999999999999999999999999997643221 1111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhccc
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 865 (869)
........ ......++..+.+++.+||+.||++|||++||++.|+.+........
T Consensus 232 ~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 232 EKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred ccccCCch-----------------------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 11110000 00001234678899999999999999999999999999988765543
No 99
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=7.8e-41 Score=353.85 Aligned_cols=254 Identities=25% Similarity=0.411 Sum_probs=203.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch-------hhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-------ALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||+||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 46899999999999999999999999999999998643221 126789999999999999999999997542
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCc
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~ 703 (869)
.++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++.++.
T Consensus 96 -----~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 96 -----PRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp -----TEEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred -----CeEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 2699999999999999876543 489999999999999999999999 8 999999999999988776
Q ss_pred -----EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC--CCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 704 -----AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT--GSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 704 -----~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+||+|||.++.... ......||+.|+|||++. ...++.++||||+||++|+|++|+.||...
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp TCSCCEEECCCTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCceeEEeCCCCccccccc-----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999974322 223456899999999984 455789999999999999999999999754
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
............. ..... ..+..++..+.+++.+||+.||++|||++|+++.|++
T Consensus 232 ~~~~~~~~~~~~~---~~~~~----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 232 SYGKIKFINMIRE---EGLRP----------------------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCCHHHHHHHHHH---SCCCC----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cccHHHHHHHHhc---cCCCC----------------------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 3322111111110 00000 0111334568899999999999999999999999975
Q ss_pred H
Q 002897 857 A 857 (869)
Q Consensus 857 ~ 857 (869)
+
T Consensus 287 l 287 (287)
T 4f0f_A 287 L 287 (287)
T ss_dssp C
T ss_pred C
Confidence 3
No 100
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.3e-40 Score=350.86 Aligned_cols=274 Identities=20% Similarity=0.252 Sum_probs=212.5
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++|++++..+.++... ....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~----~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE----GDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE----TTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCC----CCce
Confidence 45789999999999999999999988999999998754332 24578899999999998888887776442 3778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEcc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGD 708 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 708 (869)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 9999999986543 389999999999999999999999 99999999999999 7889999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC--chHHHh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG--LTLHEF 786 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~--~~~~~~ 786 (869)
||.++............ ........||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ......
T Consensus 152 fg~a~~~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIP-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CTTCEECBCTTTCCBCC-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred CccceeccCcccCccCC-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence 99998776543221111 122345679999999999999999999999999999999999999997643221 111111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
......... ......++..+.+++.+||+.||++|||++|+++.|+++.+.....
T Consensus 231 ~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~ 285 (296)
T 4hgt_A 231 SEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 285 (296)
T ss_dssp HHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred hcccccchh-----------------------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 111100000 0000123567889999999999999999999999999998876543
No 101
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4e-41 Score=373.30 Aligned_cols=263 Identities=20% Similarity=0.223 Sum_probs=207.7
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeec
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSS 622 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 622 (869)
+.++....++|++.++||+|+||+||+|++..+++.||+|+++... ......+.+|+.++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4455556789999999999999999999999899999999996432 2223458899999999999999999999765
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
. ...++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 146 ~-----~~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 146 D-----NNLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp S-----SEEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred C-----CEEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 3 789999999999999999987433 389999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
.+||+|||+|+....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 213 ~vkL~DFGla~~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp CEEECCCTTCEECCTTSC-------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CEEEcchhhhhhcccCCC-------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999986654321 1223457999999999986 5678999999999999999999999997532
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 852 (869)
.. ............... |. .....+..+.+++.+|+..+|++ ||+++|+++
T Consensus 286 ~~-~~~~~i~~~~~~~~~-----p~------------------~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 286 LV-ETYGKIMNHKERFQF-----PT------------------QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HH-HHHHHHHTHHHHCCC-----CS------------------SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hh-HHHHhhhhccccccC-----Cc------------------ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11 111111110000000 00 00113446779999999998888 999999976
No 102
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.7e-41 Score=354.44 Aligned_cols=262 Identities=26% Similarity=0.438 Sum_probs=197.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.++||+|+||+||+|++. ..||+|+++.. .....+.+.+|++++++++||||+++++++.. .
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA------P 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------S
T ss_pred CccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC------C
Confidence 3568999999999999999999874 35999998643 33445778999999999999999999997532 4
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred ccEEEEEecCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccc
Confidence 57899999999999999976543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
|.+........ ........||+.|+|||++. +..++.++|||||||++|+|++|+.||.............
T Consensus 165 g~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~ 238 (289)
T 3og7_A 165 GLATEKSRWSG------SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238 (289)
T ss_dssp C------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH
T ss_pred eeccccccccc------cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh
Confidence 99976543221 12223456899999999886 5678899999999999999999999997543221111111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
........... ....++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 239 ~~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 239 GRGSLSPDLSK-----------------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHTSCCCCTTS-----------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cccccCcchhh-----------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11111110000 011345678899999999999999999999999998764
No 103
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=355.01 Aligned_cols=246 Identities=26% Similarity=0.317 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD-----AQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-----SS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe-----CC
Confidence 367999999999999999999999999999999997532 2345678899999999999999999999764 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 8999999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......
T Consensus 151 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~ 214 (318)
T 1fot_A 151 GFAKYVPDV-----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEK 214 (318)
T ss_dssp SSCEECSSC-----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH
T ss_pred CcceecCCc-----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 999865432 2345699999999999999999999999999999999999999965321 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
....... .+...+..+.+++.+|++.||++|| +++|+++
T Consensus 215 i~~~~~~------------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 215 ILNAELR------------------------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHCCCC------------------------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHhCCCC------------------------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1111000 0012234678999999999999999 8888875
No 104
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.2e-41 Score=360.55 Aligned_cols=273 Identities=22% Similarity=0.374 Sum_probs=197.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCe---EEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGM---LVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
..++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 35689999999999999999999876664 8999999654 344567899999999999999999999998654211
Q ss_pred C-CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 627 G-VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 627 ~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
+ ....++||||+++|+|.+++...........+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 1 123489999999999999997654322233589999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLH 784 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~ 784 (869)
|+|||.|+........ .......+++.|+|||.+.+..++.++|||||||++|+|++ |+.||....... ...
T Consensus 178 l~Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~ 250 (323)
T 3qup_A 178 VADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYN 250 (323)
T ss_dssp ECCCCC-----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHH
T ss_pred Eeeccccccccccccc------cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHH
Confidence 9999999876443211 12233456889999999998899999999999999999999 999997533221 111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
.... ... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 251 ~~~~----~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 YLIG----GNR-----------------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHT----TCC-----------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhc----CCC-----------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1110 000 0011123456889999999999999999999999999987654
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-41 Score=361.46 Aligned_cols=266 Identities=18% Similarity=0.333 Sum_probs=200.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+++.||||+++.. .......+.+|++++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 46899999999999999999999989999999999653 2334567899999999999999999999976542 2223
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 5699999999999999998654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.++....... .........||+.|+|||++.+..++.++|||||||++|+|++|+.||................
T Consensus 161 g~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~ 235 (311)
T 3ork_A 161 GIARAIADSGN-----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235 (311)
T ss_dssp SCC-----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC
T ss_pred cCccccccccc-----ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence 99987654321 1122334568999999999999999999999999999999999999997532211111100000
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV-VKLCAAR 858 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~~~ 858 (869)
. ..+ ......++..+.+++.+||+.||++||++.+++ ..+.++.
T Consensus 236 ~--------~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 236 P--------IPP-----------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp C--------CCH-----------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred C--------CCc-----------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 0 000 000112456688999999999999999766655 4555443
No 106
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=7.5e-41 Score=360.86 Aligned_cols=281 Identities=24% Similarity=0.342 Sum_probs=214.7
Q ss_pred cCCCCCCeeeeecceEEEEEE----ECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGI----IGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++... +..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGP---GRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS---SSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC---CCc
Confidence 578999999999999999999 4568999999999877666678899999999999999999999987632 346
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 78999999999999999987543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+.......... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ....
T Consensus 172 g~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~------~~~~ 240 (327)
T 3lxl_A 172 GLAKLLPLDKDYY-----VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE------FLRM 240 (327)
T ss_dssp GGCEECCTTCSEE-----ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH------HHHH
T ss_pred ccceecccCCccc-----eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch------hhhh
Confidence 9998775443111 1233456888999999998888999999999999999999999998642211 0000
Q ss_pred h-cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 790 V-LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 790 ~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
. ........ ......... ......+..++..+.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 241 ~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 241 MGCERDVPAL--SRLLELLEE------GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp CC----CCHH--HHHHHHHHT------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cccccccccH--HHHHHHhhc------ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 0 00000000 000000000 0111112245567889999999999999999999999999987765543
No 107
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=360.69 Aligned_cols=252 Identities=22% Similarity=0.289 Sum_probs=190.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++... ...
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETP-----TEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecC-----CeE
Confidence 3567999999999999999999999899999999997543 336688999999999999999999997653 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEcc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---DMVAHVGD 708 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~D 708 (869)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 99999999999999998654 389999999999999999999999 9999999999999975 88999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 195 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~ 265 (349)
T 2w4o_A 195 FGLSKIVEHQV---------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN 265 (349)
T ss_dssp CC-------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred CccccccCccc---------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence 99998654321 223456899999999999999999999999999999999999999653222111111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. . .... +...+.+..+.+++.+||+.||++|||+.|+++
T Consensus 266 ~~----~-~~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 266 CE----Y-YFIS-------------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TC----C-CCCT-------------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC----C-ccCC-------------------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 10 0 0000 001123456789999999999999999999986
No 108
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.7e-41 Score=362.39 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=203.3
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC-CCCccceEEEEeecccc
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI-RHRNLIKIITICSSIDF 625 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 625 (869)
....++|++.+.||+|+||.||+|+++.+|+.||+|+++... ....+.+..|..+++.+ +||||+++++++.+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--- 89 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--- 89 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC---
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe---
Confidence 345678999999999999999999999999999999997532 33456788899999877 99999999999765
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
....++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+|
T Consensus 90 --~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 90 --KENLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp --SSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEE
Confidence 378999999999999999998754 389999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||+|+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..
T Consensus 159 L~DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~ 225 (345)
T 1xjd_A 159 IADFGMCKENMLGD--------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EE 225 (345)
T ss_dssp ECCCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred EeEChhhhhcccCC--------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HH
Confidence 99999997543221 223456799999999999999999999999999999999999999975321 11
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR-DVV 851 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 851 (869)
......... +. .+...+..+.+++.+||+.||++||++. |++
T Consensus 226 ~~~~i~~~~------~~------------------~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 226 LFHSIRMDN------PF------------------YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHHHHCC------CC------------------CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHHHhCC------CC------------------CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111111000 00 0011234678999999999999999997 654
No 109
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=368.04 Aligned_cols=287 Identities=19% Similarity=0.249 Sum_probs=217.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|.+.++||+|+||+||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++... +....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET---TTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT---TTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccC---CCCee
Confidence 357999999999999999999999899999999997533 23456788999999999999999999997643 23478
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL----DHDMVAHVG 707 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~ 707 (869)
++||||+++|+|.+++...... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCCHHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEe
Confidence 9999999999999999865421 2389999999999999999999999 99999999999999 778889999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--------CCCCccccchhhhHHHHHHHcCCCCCCcCccC
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--------SEASMTGDVYSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~il~el~tg~~pf~~~~~~ 779 (869)
|||.|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 159 DFG~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~ 229 (396)
T 4eut_A 159 DFGAARELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGP 229 (396)
T ss_dssp CGGGCEECCCGG---------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCT
T ss_pred cCCCceEccCCC---------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcc
Confidence 999998765432 2234569999999998764 45788999999999999999999999754332
Q ss_pred CchHHHhhhhh---cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 780 GLTLHEFSKMV---LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 780 ~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
........... .+......... ......... ............+..+.+++.+||+.||++|||+.|+++.+..
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 230 RRNKEVMYKIITGKPSGAISGVQKA-ENGPIDWSG--DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp TTCHHHHHHHHHSCCTTCCEEEECS-TTCCEEEES--SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred cchHHHHHHHhcCCCcccchhheec-cCCCcccCc--cCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 22222221111 11111111000 000000000 0001112235677889999999999999999999999999998
Q ss_pred HHHh
Q 002897 857 AREA 860 (869)
Q Consensus 857 ~~~~ 860 (869)
+.+.
T Consensus 307 il~~ 310 (396)
T 4eut_A 307 ILHR 310 (396)
T ss_dssp HHTC
T ss_pred Hhhc
Confidence 8764
No 110
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=362.77 Aligned_cols=270 Identities=24% Similarity=0.380 Sum_probs=211.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
..++|++.+.||+|+||.||+|++. .+++.||||+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 4578999999999999999999996 355899999997543 3345778999999999999999999999754
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL------------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVV 687 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 687 (869)
....++||||+++|+|.+++....... ....+++.+++.++.||++||+|||++ +|+
T Consensus 122 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 122 --GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred --CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 367899999999999999998753210 013589999999999999999999999 999
Q ss_pred ecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHH
Q 002897 688 HGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMF 767 (869)
Q Consensus 688 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~ 767 (869)
||||||+||+++.++.+||+|||.++....... ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADY------YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC------BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCcc------ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 999999999999999999999999986543221 01223456789999999998888999999999999999999
Q ss_pred c-CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 768 S-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 768 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+ |..||..... ............. ..+..++..+.+++.+||+.||++|||
T Consensus 271 t~g~~p~~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 271 SYGLQPYYGMAH-----EEVIYYVRDGNIL-----------------------ACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp TTTCCTTTTSCH-----HHHHHHHHTTCCC-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCcCCCCCh-----HHHHHHHhCCCcC-----------------------CCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9 9999975321 1111111111000 001123456889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhc
Q 002897 847 MRDVVVKLCAAREAFVS 863 (869)
Q Consensus 847 ~~evl~~L~~~~~~~~~ 863 (869)
+.|+++.|+++.+....
T Consensus 323 ~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 323 FCSIHRILQRMCERAEG 339 (343)
T ss_dssp HHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHhhhhh
Confidence 99999999999877654
No 111
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=351.32 Aligned_cols=261 Identities=25% Similarity=0.399 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
++|++.+.||+|+||+||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 5788999999999999999998 5899999998643 34578899999999999999999999864 23689
Q ss_pred EeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-EEEcccccc
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV-AHVGDFGLA 712 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfg~a 712 (869)
||||+++|+|.+++..... ...+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||.+
T Consensus 77 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~ 153 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153 (307)
T ss_dssp EEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred EEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence 9999999999999987543 123789999999999999999999932129999999999999998886 799999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLP 792 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 792 (869)
...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||................
T Consensus 154 ~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--- 219 (307)
T 2eva_A 154 CDIQTH-----------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN--- 219 (307)
T ss_dssp ----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT---
T ss_pred cccccc-----------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc---
Confidence 754322 123358999999999999999999999999999999999999997532221111110000
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhccc
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 865 (869)
... ......++..+.+++.+||+.||++|||++|+++.|+.+.+.+....
T Consensus 220 ~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 220 GTR-----------------------PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp TCC-----------------------CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred CCC-----------------------CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 000 00011234568899999999999999999999999999988765443
No 112
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-40 Score=350.66 Aligned_cols=260 Identities=21% Similarity=0.364 Sum_probs=199.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+.. .+..||+|+++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 4689999999999999999999864 3567999998653 33445778999999999999999999998642
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 457899999999999999987543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||....... ......
T Consensus 160 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~-~~~~i~ 231 (281)
T 1mp8_A 160 FGLSRYMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIE 231 (281)
T ss_dssp --------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHH
T ss_pred cccccccCcccc-------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH-HHHHHH
Confidence 999987654321 11223456789999999988889999999999999999997 999997533221 111110
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
... . ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 232 ~~~----~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 232 NGE----R-----------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp TTC----C-----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCC----C-----------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 0 0011134456889999999999999999999999999987754
No 113
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-40 Score=363.38 Aligned_cols=270 Identities=25% Similarity=0.357 Sum_probs=214.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-------CCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++|.+.++||+|+||+||+|++.. .+..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 4689999999999999999999742 34689999996543 34457789999999999 999999999997643
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
+..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 148 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 -----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred -----CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 6789999999999999999876421 0123489999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p 293 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCcEEEcccCcccccccccc------cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999987654321 122334457889999999999999999999999999999999 9999
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|..... .+........... ..+..++..+.+++.+||+.||++|||++||++
T Consensus 294 ~~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 294 YPGVPV-----EELFKLLKEGHRM-----------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp STTCCH-----HHHHHHHHTTCCC-----------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCH-----HHHHHHHHcCCCC-----------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 864321 1111111111000 001123456889999999999999999999999
Q ss_pred HHHHHHHhhhcc
Q 002897 853 KLCAAREAFVSM 864 (869)
Q Consensus 853 ~L~~~~~~~~~~ 864 (869)
.|+++.+.....
T Consensus 346 ~L~~~~~~~~~~ 357 (382)
T 3tt0_A 346 DLDRIVALTSNQ 357 (382)
T ss_dssp HHHHHHHHSCSC
T ss_pred HHHHHHHHHhcC
Confidence 999998765443
No 114
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-40 Score=349.30 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=207.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||+||+|.+. ++..||+|+++.... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-----QRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS-----SSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEec-----CCCe
Confidence 3468999999999999999999986 788999999975433 23678999999999999999999999754 3678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccc
Confidence 999999999999999987433 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ .......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||...... ......
T Consensus 167 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~ 234 (283)
T 3gen_A 167 SRYVLDDEY-------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHI 234 (283)
T ss_dssp GGGBCCHHH-------HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHH
T ss_pred ccccccccc-------ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHH
Confidence 986644211 12233456889999999998889999999999999999998 99999753221 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
... .. .. .+...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 235 ~~~-~~-~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 235 AQG-LR-LY---------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HTT-CC-CC---------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcc-cC-CC---------------------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 000 00 00 0011234678999999999999999999999999998765
No 115
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.2e-41 Score=350.96 Aligned_cols=254 Identities=24% Similarity=0.389 Sum_probs=193.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc----hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK----GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+ .|+.||||+++.... ...+.+.+|+++++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE----- 78 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-----
Confidence 35788999999999999999998 589999999864322 2346789999999999999999999997643
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--------
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-------- 700 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------- 700 (869)
...++||||+++++|.+++... .+++..++.++.|+++||+|||++...+|+||||||+||+++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 79 PNLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred CceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 6789999999999999999643 3899999999999999999999991112999999999999986
Q ss_pred CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 701 DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 701 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
++.+||+|||.+....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.......
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 221 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTT----------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA 221 (271)
T ss_dssp SCCEEECCCCC-----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred CcceEEccCCccccccccc----------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 6789999999997654322 123468999999999998889999999999999999999999997532211
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHH
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAA 857 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~ 857 (869)
............ ..+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 222 -----~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 222 -----VAYGVAMNKLAL----------------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----HHHHHHTSCCCC----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----HHHhhhcCCCCC----------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111110000000 00112345688999999999999999999999999753
No 116
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.5e-40 Score=371.81 Aligned_cols=278 Identities=18% Similarity=0.198 Sum_probs=202.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 629 (869)
.++|++.++||+|+||+||+|.+..+|+.||||++... .....+++.+|+.+++.++||||+++++++.... .++..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999643 3445678899999999999999999999986542 23446
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++ ++.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 78999999976 57666643 288999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ..+....+.
T Consensus 209 G~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~ 278 (464)
T 3ttj_A 209 GLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQ 278 (464)
T ss_dssp CCC-----C---------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred EeeeecCCC---------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 999865432 2234467999999999999999999999999999999999999999753211 111111111
Q ss_pred hccc--ccccccCccchhhhhhccc------------ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPE--KVMEIVDPSLLLEVRANNS------------MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~--~~~~~~d~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.-.. .......+........... ................+.+++.+||+.||++|||++|+++
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1000 0000000000000000000 0000111122334677899999999999999999999987
No 117
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.8e-40 Score=373.37 Aligned_cols=207 Identities=22% Similarity=0.346 Sum_probs=162.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|++..+|+.||||++... .....+++.+|+++++.++||||+++++++.....+....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36899999999999999999999999999999998643 3344578899999999999999999999987665566678
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.|+||||+ +|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecc-ccchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 99999998 569999997654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc-------------------ccCCCCCCccCcccccCCccc-CCCCCCccccchhhhHHHHHHHcC
Q 002897 711 LAKFLPARPLDTVV-------------------ETPSSSSGIKGTVGYIAPEYG-TGSEASMTGDVYSFGILLLEMFSR 769 (869)
Q Consensus 711 ~a~~~~~~~~~~~~-------------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~el~tg 769 (869)
+|+........... .........+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 99876543211000 000123456789999999975 556799999999999999999993
No 118
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5.4e-39 Score=363.68 Aligned_cols=357 Identities=25% Similarity=0.381 Sum_probs=258.0
Q ss_pred CCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCcc
Q 002897 6 NNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGF 85 (869)
Q Consensus 6 ~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~ 85 (869)
.+.+.+.++.. .+.+++.|++++|.++ .+| .+..+++|++|+|++|.+++. |. |+++++|++|+|++|++.+.
T Consensus 33 ~~~~~~~i~~~---~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~ 105 (466)
T 1o6v_A 33 KTNVTDTVSQT---DLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADI 105 (466)
T ss_dssp CSSTTSEECHH---HHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC
T ss_pred ccccccccChh---HhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccC
Confidence 34444455543 3578999999999998 455 488899999999999999854 43 89999999999999999865
Q ss_pred CCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccC
Q 002897 86 IPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNS 165 (869)
Q Consensus 86 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~ 165 (869)
.+ +.++++|++|+|++|.+. .++. +..+++|++|++++|.+++. + .+..+++|++|+++ |.+.... .+..
T Consensus 106 ~~--~~~l~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~ 175 (466)
T 1o6v_A 106 TP--LANLTNLTGLTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLAN 175 (466)
T ss_dssp GG--GTTCTTCCEEECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTT
T ss_pred hh--hcCCCCCCEEECCCCCCC-CChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhcc
Confidence 44 889999999999999987 5553 78888999999999988864 2 58888889999886 4444443 3888
Q ss_pred CCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCC
Q 002897 166 LKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNL 245 (869)
Q Consensus 166 l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 245 (869)
+++|++|++++|.++.++ .+..+++|++|++++|++++..| +..+++ |+.|++++|.+++. ..+..+
T Consensus 176 l~~L~~L~l~~n~l~~~~--------~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~-L~~L~l~~n~l~~~--~~l~~l 242 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDIS--------VLAKLTNLESLIATNNQISDITP--LGILTN-LDELSLNGNQLKDI--GTLASL 242 (466)
T ss_dssp CTTCCEEECCSSCCCCCG--------GGGGCTTCSEEECCSSCCCCCGG--GGGCTT-CCEEECCSSCCCCC--GGGGGC
T ss_pred CCCCCEEECcCCcCCCCh--------hhccCCCCCEEEecCCccccccc--ccccCC-CCEEECCCCCcccc--hhhhcC
Confidence 888888888888887653 36778888888888888876544 455554 88888888887743 356777
Q ss_pred CCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeec
Q 002897 246 VHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTL 325 (869)
Q Consensus 246 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 325 (869)
++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 777777777777765433 6777777777777777775444 6677777777777777764332 666777777777
Q ss_pred cCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccC
Q 002897 326 SKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSG 405 (869)
Q Consensus 326 ~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 405 (869)
++|++++. .| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++
T Consensus 317 ~~n~l~~~-------------------------~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 317 YFNNISDI-------------------------SP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CSSCCSCC-------------------------GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCB
T ss_pred cCCcCCCc-------------------------hh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCc
Confidence 77776632 22 45566666666666666643 356666666666666666665
Q ss_pred CCCccccccccccEEEccCCcccC
Q 002897 406 SIPPSLNFLKSIKVLDLSSNKLSG 429 (869)
Q Consensus 406 ~~p~~~~~l~~L~~L~L~~N~l~~ 429 (869)
..| +..+++|+.|++++|++++
T Consensus 368 ~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 368 LTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CGG--GTTCTTCCEEECCCEEEEC
T ss_pred cch--hhcCCCCCEEeccCCcccC
Confidence 544 6666666666666666664
No 119
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.3e-40 Score=356.51 Aligned_cols=259 Identities=23% Similarity=0.372 Sum_probs=204.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeE----EEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGML----VAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|++.++||+|+||+||+|++..+++. ||+|.+.... ......+.+|+.++++++||||+++++++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 5788999999999999999999877765 7777764322 3334567889999999999999999998743
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred CccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 568899999999999999987543 388999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||+|+........ .......|+..|+|||++.+..++.++|||||||++|+|++ |+.||...... ......
T Consensus 159 fg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~ 230 (325)
T 3kex_A 159 FGVADLLPPDDKQ------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLL 230 (325)
T ss_dssp CSGGGGSCCCTTC------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHH
T ss_pred CCcccccCccccc------ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHH
Confidence 9999887554311 22334567889999999998899999999999999999999 99999753222 111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
........ +..++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 231 ~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 231 EKGERLAQ--------------------------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp HTTCBCCC--------------------------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HcCCCCCC--------------------------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11100000 001223466899999999999999999999999988654
No 120
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.4e-42 Score=364.50 Aligned_cols=272 Identities=24% Similarity=0.360 Sum_probs=191.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHh--CCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRS--IRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 36899999999999999999987 5899999998643 33567788888887 79999999999987642 12237
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeecCCC
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH--------HHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
.++||||+++|+|.++++... +++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHCC-------BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTC
T ss_pred eEEEEeccCCCCHHHHHhccC-------cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCC
Confidence 899999999999999997653 788899999999999999999 77 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC------CCCccccchhhhHHHHHHHcC-------
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS------EASMTGDVYSFGILLLEMFSR------- 769 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~il~el~tg------- 769 (869)
.+||+|||+|......... .........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 146 ~~kl~DFg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CC-BCCCCC-CCEETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC
T ss_pred CEEEeecCcceeccCCCcc----cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 9999999999765443211 01122344799999999998776 344689999999999999999
Q ss_pred ---CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 770 ---RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 770 ---~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+.||....................... ..........+++..+.+++.+||+.||++|||
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLR-----------------PNIPNRWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp -CCCCTTTTTCC-CCCCC-CHHHHTTSCCC-----------------CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred ceeeccccccCCCCccHHHHHHHHHHhhcC-----------------CCccccccchhhHHHHHHHHHHHhccCcccCCC
Confidence 445443222211111111111111110 011111222367788999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 002897 847 MRDVVVKLCAAREAF 861 (869)
Q Consensus 847 ~~evl~~L~~~~~~~ 861 (869)
++||++.|+++.+..
T Consensus 285 ~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHHC-CCC-
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999887643
No 121
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-40 Score=355.98 Aligned_cols=275 Identities=24% Similarity=0.387 Sum_probs=204.9
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
...++|.+.+.||+|+||.||+|.+.. +++.||+|+++.. .....+.+.+|+.++++++||||+++++++.....
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 345789999999999999999998764 4568999998644 33445778999999999999999999999876543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
.+....++||||+++|+|.+++...........+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 33346799999999999999996543322234599999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLH 784 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~ 784 (869)
|+|||.+......... .......+++.|+|||.+.+..++.++|||||||++|+|++ |..||....... ...
T Consensus 188 l~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~ 260 (313)
T 3brb_A 188 VADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE-MYD 260 (313)
T ss_dssp ECSCSCC----------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHH
T ss_pred EeecCcceeccccccc------CcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHH
Confidence 9999999866443210 12233457889999999999899999999999999999999 889986532211 111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
....... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+...
T Consensus 261 ~~~~~~~---------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 261 YLLHGHR---------------------------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HHHTTCC---------------------------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HHHcCCC---------------------------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1111000 00111334568899999999999999999999999999988754
No 122
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.8e-40 Score=355.89 Aligned_cols=264 Identities=23% Similarity=0.336 Sum_probs=204.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeecccc------
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDF------ 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 625 (869)
.++|++.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467999999999999999999999999999999997543 3355788999999999999999999998865321
Q ss_pred ----------------------------------------------CCCceEEEEeecccCCCHHHHHhhCCCcccccCC
Q 002897 626 ----------------------------------------------NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNL 659 (869)
Q Consensus 626 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l 659 (869)
......++||||+++|+|.+++...... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~ 161 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---EDR 161 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GGS
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cch
Confidence 1123489999999999999999876542 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCcc----ccCCCCCCccC
Q 002897 660 SLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVV----ETPSSSSGIKG 735 (869)
Q Consensus 660 ~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~----~~~~~~~~~~g 735 (869)
++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........... ..........|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 7778999999999999999999 9999999999999999999999999999887654321110 00122344579
Q ss_pred cccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccC
Q 002897 736 TVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSR 815 (869)
Q Consensus 736 t~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 815 (869)
|+.|+|||++.+..++.++|||||||++|||++|..|+... ..........
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~---------------------- 289 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNL---------------------- 289 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTT----------------------
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhcc----------------------
Confidence 99999999999999999999999999999999987774311 0111100000
Q ss_pred CCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 816 GGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 816 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.........++.+.+++.+||+.||++|||++|+++
T Consensus 290 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 290 -KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp -CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred -CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 011122345566789999999999999999999986
No 123
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3e-40 Score=371.03 Aligned_cols=254 Identities=30% Similarity=0.398 Sum_probs=207.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+ .|+.||||+++... ..+.+.+|++++++++||||+++++++... ....+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT----TSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC----CCceE
Confidence 46788899999999999999998 58899999997543 457899999999999999999999997643 24689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 264 iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 99999999999999987542 1378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+..... .....++..|+|||++.+..++.++|||||||++|||++ |+.||....... .........
T Consensus 337 ~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~~i~~~~- 403 (450)
T 1k9a_A 337 KEASST-----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVPRVEKGY- 403 (450)
T ss_dssp EECC-----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-HHHHHHTTC-
T ss_pred cccccc-----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCC-
Confidence 854322 112256889999999999999999999999999999998 999997543221 111111000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
....+..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 404 --------------------------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 --------------------------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --------------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0011123456788999999999999999999999999998765
No 124
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-40 Score=354.08 Aligned_cols=276 Identities=26% Similarity=0.388 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeecceEEEEEE----ECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGI----IGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.+|++.+.||+|+||.||+|+ +..+++.||+|+++... ....+.+.+|+++++.++||||+++++++... +.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 468899999999999999999 45689999999997433 33457889999999999999999999998653 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 568999999999999999966543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+......... ........||..|+|||++.+..++.++||||+||++|+|++|+.|+..... ....
T Consensus 170 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~ 238 (302)
T 4e5w_A 170 FGLTKAIETDKEY-----YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA------LFLK 238 (302)
T ss_dssp CTTCEECCTTCCE-----EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHH
T ss_pred ccccccccCCCcc-----eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh------HHhh
Confidence 9999877654311 1223345688899999999888899999999999999999999998643211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
...+.. .............. ......+..++..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 239 MIGPTH-GQMTVTRLVNTLKE------GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHCSCC-GGGHHHHHHHHHHT------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCcc-cccCHHHHHHHHhc------cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000000 00000000000000 0011111234567889999999999999999999999999875
No 125
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.3e-40 Score=360.82 Aligned_cols=255 Identities=22% Similarity=0.240 Sum_probs=195.2
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||+||+|++..+++.||||++..... ..+.+.+|+.+++.++||||+++++++... ...
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~ 91 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTP-----THL 91 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC-----CEE
Confidence 35689999999999999999999999999999999965432 336788999999999999999999997653 779
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--EEEccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV--AHVGDF 709 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Df 709 (869)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ ||+||||||+||+++.++. +||+||
T Consensus 92 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 92 AIIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp EEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeec
Confidence 99999999999999997654 389999999999999999999999 9999999999999987765 999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCcc-ccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMT-GDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+..... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||........ ......
T Consensus 163 g~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~ 232 (361)
T 3uc3_A 163 GYSKSSVLH---------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQ 232 (361)
T ss_dssp CCC------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHH
T ss_pred Ccccccccc---------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHH
Confidence 999743222 22234569999999999988777655 8999999999999999999976433222 122111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......... .....+..+.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~----------------------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 233 RILSVKYSIP----------------------DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHTTCCCCC----------------------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhcCCCCCC----------------------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111100000 000123567899999999999999999999874
No 126
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3e-40 Score=354.81 Aligned_cols=249 Identities=22% Similarity=0.282 Sum_probs=181.5
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEEEEeec
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
.+.||+|+||+||+|.+..+|+.||||++... ....+.+|+.+++.+. ||||+++++++.+. ...++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~-----~~~~lv~e~ 87 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQ-----LHTFLVMEL 87 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SEEEEEECC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC-----CEEEEEEEc
Confidence 47899999999999999999999999999643 3467789999999996 99999999997643 788999999
Q ss_pred ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEEcccccccc
Q 002897 638 MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---VAHVGDFGLAKF 714 (869)
Q Consensus 638 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~ 714 (869)
+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 88 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 88 LNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp CCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999998764 389999999999999999999999 999999999999998766 899999999986
Q ss_pred CCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccC--CchHHHhhhhhcc
Q 002897 715 LPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHE--GLTLHEFSKMVLP 792 (869)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~ 792 (869)
..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+.......
T Consensus 159 ~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~ 230 (325)
T 3kn6_A 159 KPPDN--------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230 (325)
T ss_dssp CCC------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTT
T ss_pred cCCCC--------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHc
Confidence 65432 2223456899999999999999999999999999999999999999753321 1111111111111
Q ss_pred cccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 793 EKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 793 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .........++.++.+++.+||+.||++|||++|+++
T Consensus 231 ~~~--------------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 231 GDF--------------------SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TCC--------------------CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCC--------------------CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 100 0011112234567889999999999999999999874
No 127
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=362.40 Aligned_cols=247 Identities=20% Similarity=0.281 Sum_probs=197.6
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeecc
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
.+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-----~~~~lv~E~~ 168 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK-----NDIVLVMEYV 168 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SEEEEEEECC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC-----CEEEEEEeCC
Confidence 56899999999999999989999999999876656667899999999999999999999997653 7789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee--cCCCcEEEccccccccCC
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL--DHDMVAHVGDFGLAKFLP 716 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfg~a~~~~ 716 (869)
++|+|.+++..... .+++..++.++.||++||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 169 ~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 169 DGGELFDRIIDESY-----NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp TTCEEHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999999976543 389999999999999999999999 99999999999999 567899999999998765
Q ss_pred CCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 717 ARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 241 ~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~---- 306 (373)
T 2x4f_A 241 PRE---------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWD---- 306 (373)
T ss_dssp TTC---------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCC----
T ss_pred Ccc---------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCC----
Confidence 432 223346999999999999889999999999999999999999999753211 111111111000
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. . ......++..+.+++.+||+.||++|||++|+++
T Consensus 307 -~-~------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 307 -L-E------------------DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -S-C------------------SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -C-C------------------hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 0 0011133456889999999999999999999987
No 128
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2e-40 Score=358.65 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=203.2
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 627 (869)
..++|++.+.||+|+||.||+|++..+|+.||+|+++.. .....+.+..|..+++.+ +||+|+++++++.+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT----- 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC-----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc-----
Confidence 457899999999999999999999988999999999753 233456788999999988 89999999999754
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
.+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ ||+||||||+||+++.+|.+||+
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 378999999999999999998654 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 164 DFG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~ 230 (353)
T 2i0e_A 164 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELF 230 (353)
T ss_dssp CCTTCBCCCCTT--------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH
T ss_pred eCCcccccccCC--------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHH
Confidence 999997543221 223456799999999999999999999999999999999999999975321 1111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
......... .+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 231 ~~i~~~~~~------------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 231 QSIMEHNVA------------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHCCCC------------------------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHhCCCC------------------------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111111000 00123456789999999999999995 466654
No 129
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5e-40 Score=345.69 Aligned_cols=252 Identities=21% Similarity=0.245 Sum_probs=206.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++... ...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN-----TDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----CeE
Confidence 346799999999999999999999999999999999876666678899999999999999999999997643 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEcc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGD 708 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 708 (869)
++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 99999999999999987754 389999999999999999999999 99999999999999 7889999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+....... ......||+.|+|||++.+ .++.++||||||+++|+|++|+.||....... .......
T Consensus 153 fg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~ 221 (277)
T 3f3z_A 153 FGLAARFKPGK---------MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIRE 221 (277)
T ss_dssp CTTCEECCTTS---------CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred cccceeccCcc---------chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHh
Confidence 99998765432 2234568999999999876 48999999999999999999999997532211 1111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... ........++..+.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~~------------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 222 GTFT------------------------FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CCCC------------------------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCC------------------------CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000001123567889999999999999999999986
No 130
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2e-40 Score=355.58 Aligned_cols=270 Identities=23% Similarity=0.359 Sum_probs=214.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeecccc-hhhHHHHHHHHHHHhC-CCCccceEEEEeeccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQK-GALKSFLTECEALRSI-RHRNLIKIITICSSID 624 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 624 (869)
..++|++.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+.+++++ +||||+++++++...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 99 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG- 99 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC-
Confidence 346899999999999999999985 45788999999975432 3457789999999999 999999999997543
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCc------------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDK------------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLK 692 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 692 (869)
+..++||||+++|+|.+++...... .....+++..++.++.|+++||+|||++ +|+|||||
T Consensus 100 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 100 ----GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp ----SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred ----CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 6789999999999999999876531 0122489999999999999999999999 99999999
Q ss_pred CCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCC
Q 002897 693 PSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRR 771 (869)
Q Consensus 693 p~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~ 771 (869)
|+||+++.++.+||+|||.+......... .......|++.|+|||++.+..++.++|||||||++|+|++ |+.
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~ 246 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSNY------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTTS------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cceEEEcCCCCEEEccccccccccccccc------eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999876544211 12233457889999999988899999999999999999999 999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||........ .......... . ..+..++..+.+++.+||+.||++|||+.|++
T Consensus 247 p~~~~~~~~~-~~~~~~~~~~----~----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 247 PYPGMPVDSK-FYKMIKEGFR----M----------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp SSTTCCSSHH-HHHHHHHTCC----C----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCcccchhH-HHHHhccCCC----C----------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 9975432211 1111111100 0 00012345688999999999999999999999
Q ss_pred HHHHHHHHhhh
Q 002897 852 VKLCAAREAFV 862 (869)
Q Consensus 852 ~~L~~~~~~~~ 862 (869)
+.|+++.+...
T Consensus 300 ~~L~~~~~~~~ 310 (313)
T 1t46_A 300 QLIEKQISEST 310 (313)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhh
Confidence 99999887643
No 131
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=355.07 Aligned_cols=276 Identities=20% Similarity=0.312 Sum_probs=200.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||+||+|++..+|+.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK-----RRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC-----CeE
Confidence 57899999999999999999999899999999985433 23356788999999999999999999997653 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 99999999999999887654 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+....... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ ........
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~ 219 (311)
T 4agu_A 149 ARLLTGPS--------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTL 219 (311)
T ss_dssp CEECC--------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH
T ss_pred chhccCcc--------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHh
Confidence 98765332 22234568999999999876 5689999999999999999999999975432211 11111100
Q ss_pred ---cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 ---LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+................................++..+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000000000000000000000011234567889999999999999999999986
No 132
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.5e-40 Score=358.16 Aligned_cols=246 Identities=23% Similarity=0.268 Sum_probs=204.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~ 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD-----NS 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----SS
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-----CC
Confidence 368999999999999999999999999999999996432 2345678899999999999999999999764 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 8999999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 186 g~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~ 249 (350)
T 1rdq_E 186 GFAKRVKGR-----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYEK 249 (350)
T ss_dssp TTCEECSSC-----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred ccceeccCC-----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHHH
Confidence 999865432 2345699999999999999999999999999999999999999975321 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ-----MRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 852 (869)
....... .+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 250 i~~~~~~------------------------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 250 IVSGKVR------------------------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHCCCC------------------------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHcCCCC------------------------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1111000 00123456789999999999999998 888865
No 133
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-40 Score=367.35 Aligned_cols=260 Identities=17% Similarity=0.226 Sum_probs=206.8
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeecc
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
.++....++|++.++||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~- 140 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD- 140 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE-
Confidence 445556789999999999999999999999999999999996422 2233557899999999999999999999765
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
....++||||+++|+|.++++... +++..++.++.||+.||+|||++ +|+||||||+|||++.+++
T Consensus 141 ----~~~~~lV~E~~~gg~L~~~l~~~~-------~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 141 ----DRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ----SSEEEEEECCCTTEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred ----CCEEEEEEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 378999999999999999997643 89999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC----CCccccchhhhHHHHHHHcCCCCCCcCccC
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE----ASMTGDVYSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~il~el~tg~~pf~~~~~~ 779 (869)
+||+|||+|+....... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||......
T Consensus 207 ikL~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~ 279 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279 (410)
T ss_dssp EEECCCTTCEECCTTSE-------EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred EEEeccceeEeeccCCc-------ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh
Confidence 99999999987654321 1233567999999999987655 789999999999999999999999753211
Q ss_pred CchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 002897 780 GLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTD--RMQMRDVVVK 853 (869)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 853 (869)
............... +.....+..+.+++.+||+.+|++ ||+++||++.
T Consensus 280 -~~~~~i~~~~~~~~~------------------------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 280 -GTYSKIMNHKNSLTF------------------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -HHHHHHHTHHHHCCC------------------------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -hHHHHHHhccccccC------------------------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111111110000000 000023356789999999999998 9999999863
No 134
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=358.02 Aligned_cols=282 Identities=26% Similarity=0.434 Sum_probs=216.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEE----CCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII----GENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|++ ..+|+.||||++........+.+.+|++++++++||||+++++++... +.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---CC
Confidence 35788999999999999999994 568999999999876666778899999999999999999999987643 23
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 467999999999999999987653 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+.......... .......++..|+|||++.+..++.++|||||||++|+|+||..||..... .+.+
T Consensus 189 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~------~~~~ 257 (326)
T 2w1i_A 189 FGLTKVLPQDKEYY-----KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA------EFMR 257 (326)
T ss_dssp CTTCEECCSSCSEE-----ECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH------HHHH
T ss_pred Ccchhhcccccccc-----ccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH------HHHH
Confidence 99998775442110 112334578889999999888899999999999999999999999763211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
..............+...... ....+.+..++..+.+++.+||+.||++|||+.|+++.|+++++.+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 258 MIGNDKQGQMIVFHLIELLKN------NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHCTTCCTHHHHHHHHHHHHT------TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhccccchhhhHHHHHHHhhc------CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 000000000000000000000 00111122455678899999999999999999999999999988764
No 135
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-39 Score=353.36 Aligned_cols=276 Identities=23% Similarity=0.350 Sum_probs=215.6
Q ss_pred HHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHh--CCCCccceEEEEeeccccC
Q 002897 549 LSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRS--IRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 549 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~ 626 (869)
-....++|++.+.||+|+||.||+|++ +|+.||||++... ....+.+|+++++. ++||||+++++++.... .
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~ 110 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-G 110 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-S
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-C
Confidence 345567899999999999999999998 6999999998643 34667889999887 68999999999976541 1
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceee
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH--------HHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlkp~NIll 698 (869)
.....++||||+++|+|.+++.... +++..++.++.|++.||+||| +. +|+||||||+||++
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred ccceeEEEEeecCCCcHHHHHhccC-------ccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 1237899999999999999997643 899999999999999999999 77 99999999999999
Q ss_pred cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC------CCccccchhhhHHHHHHHcC---
Q 002897 699 DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE------ASMTGDVYSFGILLLEMFSR--- 769 (869)
Q Consensus 699 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~il~el~tg--- 769 (869)
+.++.+||+|||++.......... ........||+.|+|||++.+.. ++.++|||||||++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~ 256 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTI----DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEE----EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred CCCCCEEEEECCCceecccccccc----ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCc
Confidence 999999999999998765432110 01234457999999999987753 34689999999999999999
Q ss_pred -------CCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCC
Q 002897 770 -------RRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPT 842 (869)
Q Consensus 770 -------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 842 (869)
..||............+............+. ......+++..+.+++.+||+.||+
T Consensus 257 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dp~ 319 (342)
T 1b6c_B 257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP-----------------NRWQSCEALRVMAKIMRECWYANGA 319 (342)
T ss_dssp TTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC-----------------GGGGTSHHHHHHHHHHHHHCCSSGG
T ss_pred CCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCc-----------------ccccchhHHHHHHHHHHHHhccChh
Confidence 6777654444334444333322211111111 1112236777899999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhh
Q 002897 843 DRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 843 ~RPs~~evl~~L~~~~~~~ 861 (869)
+|||++||++.|+++.+..
T Consensus 320 ~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 320 ARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp GSCCHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 136
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.1e-40 Score=354.30 Aligned_cols=267 Identities=23% Similarity=0.343 Sum_probs=213.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
..++|.+.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++..
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 356899999999999999999998 3456899999997533 3455788999999999999999999999754
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcc------------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKL------------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVV 687 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 687 (869)
....++||||+++|+|.+++....... ....+++.+++.++.|+++||+|||++ +|+
T Consensus 98 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iv 172 (314)
T 2ivs_A 98 --DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172 (314)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred --CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCc
Confidence 367899999999999999998754310 112489999999999999999999999 999
Q ss_pred ecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHH
Q 002897 688 HGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMF 767 (869)
Q Consensus 688 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~ 767 (869)
||||||+||+++.++.+||+|||.+......... .......+++.|+|||++.+..++.++|||||||++|||+
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 246 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY------VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE------ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred ccccchheEEEcCCCCEEEccccccccccccccc------eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHH
Confidence 9999999999999999999999999876543211 1223345788999999998888999999999999999999
Q ss_pred c-CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 768 S-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 768 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
+ |+.||....... .......... ...+..++..+.+++.+||+.||++|||
T Consensus 247 t~g~~p~~~~~~~~--~~~~~~~~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 247 TLGGNPYPGIPPER--LFNLLKTGHR--------------------------MERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp TTSCCSSTTCCGGG--HHHHHHTTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hCCCCCCCCCCHHH--HHHHhhcCCc--------------------------CCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9 999997533221 1111110000 0001123456889999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 002897 847 MRDVVVKLCAAREA 860 (869)
Q Consensus 847 ~~evl~~L~~~~~~ 860 (869)
+.|+++.|+++.+.
T Consensus 299 ~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 299 FADISKDLEKMMVK 312 (314)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 137
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.7e-40 Score=366.94 Aligned_cols=212 Identities=23% Similarity=0.316 Sum_probs=173.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++... .....+++.+|+.+++.++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999999999999999999643 3344578899999999999999999999987665555578
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||++ |+|.+++.... .+++..++.++.||++||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 999999986 59999998654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCcc--------------ccCCCCCCccCcccccCCccc-CCCCCCccccchhhhHHHHHHHcCCCCCC
Q 002897 711 LAKFLPARPLDTVV--------------ETPSSSSGIKGTVGYIAPEYG-TGSEASMTGDVYSFGILLLEMFSRRRPTD 774 (869)
Q Consensus 711 ~a~~~~~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~il~el~tg~~pf~ 774 (869)
+|+........... .........+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 99877543211000 000123556799999999985 55679999999999999999999766654
No 138
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-40 Score=353.08 Aligned_cols=265 Identities=27% Similarity=0.446 Sum_probs=203.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCC----CeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGEN----GMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
++|++.+.||+|+||+||+|.+..+ +..||||+++... ......+.+|+.++++++||||+++++++.. .
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-----Y 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----S
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec-----C
Confidence 4677789999999999999998644 3469999997543 3345678999999999999999999999754 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 778999999999999999987543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.++......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ....
T Consensus 191 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~ 260 (333)
T 1mqb_A 191 FGLSRVLEDDPEAT-----YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVM 260 (333)
T ss_dssp CCC----------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHH
T ss_pred CCcchhhccccccc-----cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-----HHHH
Confidence 99998765432111 11223446789999999998899999999999999999999 9999964321 1111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
........ .+.+..++..+.+++.+||+.||++||++.|+++.|+++.+.....
T Consensus 261 ~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~ 314 (333)
T 1mqb_A 261 KAINDGFR-----------------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314 (333)
T ss_dssp HHHHTTCC-----------------------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred HHHHCCCc-----------------------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhh
Confidence 11110000 0001123456889999999999999999999999999988765543
No 139
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=8.3e-40 Score=351.60 Aligned_cols=252 Identities=20% Similarity=0.266 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch------hhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG------ALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|++...... ..+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 87 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR--- 87 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 46799999999999999999999989999999999653321 357789999999999999999999997643
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM---- 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 702 (869)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 88 --~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 88 --TDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 77999999999999999998654 389999999999999999999999 999999999999999888
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
.+||+|||.+....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--- 224 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--- 224 (321)
T ss_dssp CEEECCCTTCEECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---
T ss_pred CEEEccCccceecCccc---------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---
Confidence 79999999998765432 223456899999999999999999999999999999999999999653211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......... ...++ ......+..+.+++.+||+.||++|||+.|+++
T Consensus 225 --~~~~~i~~~~--~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 --ETLANITSVS--YDFDE------------------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --HHHHHHHTTC--CCCCH------------------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --HHHHHHHhcc--cccCh------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111110000 00000 011123456889999999999999999999987
No 140
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.7e-40 Score=361.02 Aligned_cols=255 Identities=20% Similarity=0.274 Sum_probs=195.6
Q ss_pred hcCCCCC-CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHh-CCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSS-NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRS-IRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|.+. ++||+|+||+||+|.+..+|+.||||+++. ...+.+|++++.+ .+||||+++++++... ..+...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcE
Confidence 3567665 689999999999999999999999999853 2456788888754 5899999999987642 234577
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---DMVAHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 707 (869)
.++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 8999999999999999987542 2489999999999999999999999 9999999999999997 7899999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCc---hHH
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL---TLH 784 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~---~~~ 784 (869)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 207 DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~ 277 (400)
T 1nxk_A 207 DFGFAKETTSH---------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277 (400)
T ss_dssp CCTTCEECC--------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH
T ss_pred ecccccccCCC---------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH
Confidence 99999865432 122345689999999999999999999999999999999999999975432211 011
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... ... ......++.++.+++.+||+.||++|||+.|+++.
T Consensus 278 ~i~~~~~-----~~~-------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 278 RIRMGQY-----EFP-------------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHTCC-----CCC-------------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHcCcc-----cCC-------------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1110000 000 00011344568899999999999999999999874
No 141
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.6e-39 Score=344.18 Aligned_cols=252 Identities=23% Similarity=0.361 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..|.+.+.||+|+||+||+|.+..++..||+|++... .....+.+.+|+.++++++||||+++++++... ..+....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 3477788999999999999999999999999998643 344567789999999999999999999987654 3445778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeec-CCCcEEEcc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLD-HDMVAHVGD 708 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~D 708 (869)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred EEEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEee
Confidence 99999999999999998754 389999999999999999999999 7 99999999999997 789999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||....... ....
T Consensus 176 fg~~~~~~~~----------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~ 240 (290)
T 1t4h_A 176 LGLATLKRAS----------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA----QIYR 240 (290)
T ss_dssp TTGGGGCCTT----------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH----HHHH
T ss_pred CCCccccccc----------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH----HHHH
Confidence 9999754332 2233568999999998874 58999999999999999999999997532221 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......... .....++.+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 241 RVTSGVKPAS----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHTTTCCCGG----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhccCCccc----------------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1111000000 00112345789999999999999999999986
No 142
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=360.55 Aligned_cols=270 Identities=21% Similarity=0.335 Sum_probs=209.2
Q ss_pred HhcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSID 624 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 624 (869)
..++|++.+.||+|+||.||+|++ ..+++.||||++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 121 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS- 121 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC-
Confidence 457899999999999999999997 346778999999643 234457889999999999 899999999997643
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcc-----------------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKL-----------------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVV 687 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 687 (869)
+..++||||+++|+|.+++....... ....+++..++.++.||+.||+|||+. ||+
T Consensus 122 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 194 (344)
T 1rjb_A 122 ----GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCV 194 (344)
T ss_dssp ----SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ----CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 67899999999999999998764321 012379999999999999999999999 999
Q ss_pred ecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHH
Q 002897 688 HGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMF 767 (869)
Q Consensus 688 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~ 767 (869)
||||||+||+++.++.+||+|||.+......... .......||+.|+|||++.+..++.++|||||||++|+|+
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 268 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCccc------eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHH
Confidence 9999999999999999999999999866433211 1223455788999999998889999999999999999999
Q ss_pred c-CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCC
Q 002897 768 S-RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQ 846 (869)
Q Consensus 768 t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 846 (869)
| |..||....... ............ ..+..++..+.+++.+||+.||++|||
T Consensus 269 t~g~~p~~~~~~~~-~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 269 SLGVNPYPGIPVDA-NFYKLIQNGFKM--------------------------DQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp TTSCCSSTTCCCSH-HHHHHHHTTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred cCCCCCcccCCcHH-HHHHHHhcCCCC--------------------------CCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 8 999997643221 111111111000 001123456889999999999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 002897 847 MRDVVVKLCAAREAFV 862 (869)
Q Consensus 847 ~~evl~~L~~~~~~~~ 862 (869)
+.|+++.|+.+.+...
T Consensus 322 ~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 322 FPNLTSFLGCQLADAE 337 (344)
T ss_dssp HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999877654
No 143
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.1e-40 Score=351.08 Aligned_cols=270 Identities=21% Similarity=0.325 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|.+..+|+.||||+++.. .......+.+|+.++++++||||+++++++... +
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----N 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----T
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----C
Confidence 45799999999999999999999889999999999642 344557789999999999999999999997654 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCCHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 889999999999999998753211 12489999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 181 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~ 249 (310)
T 2wqm_A 181 GLGRFFSSKT--------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKK 249 (310)
T ss_dssp --------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHH
T ss_pred cceeeecCCC--------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHH
Confidence 9997654332 1223356899999999999999999999999999999999999999643221 1111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhccc
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 865 (869)
......... ....++..+.+++.+||+.||++|||+.||++.|+++.+....+-
T Consensus 250 ~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 250 IEQCDYPPL----------------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp HHTTCSCCC----------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred hhcccCCCC----------------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 111000000 001234568899999999999999999999999999988776543
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.4e-39 Score=343.60 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=205.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC-----CE
Confidence 468999999999999999999999999999999996543 33457788999999999999999999997643 77
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV---AHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 707 (869)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 899999999999999987654 389999999999999999999999 9999999999999987655 9999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.+....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ...
T Consensus 151 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~ 216 (284)
T 3kk8_A 151 DFGLAIEVNDSE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLY 216 (284)
T ss_dssp CCTTCEECCSSC---------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred eceeeEEcccCc---------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-----HHH
Confidence 999997665432 223456899999999999999999999999999999999999999653211 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
........ .... +....++..+.+++.+||+.||++|||++|+++.
T Consensus 217 ~~~~~~~~-~~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 217 AQIKAGAY-DYPS-------------------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHHHHTCC-CCCT-------------------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHhccc-cCCc-------------------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11100000 0000 0011234568899999999999999999999873
No 145
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.3e-40 Score=350.23 Aligned_cols=267 Identities=24% Similarity=0.404 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCC---CeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..+|++.++||+|+||+||+|++..+ +..||+|.+... .....+.+.+|+.++++++||||+++++++... .
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~ 99 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----E 99 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----S
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC----C
Confidence 35688899999999999999997533 346899998643 334557889999999999999999999986542 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 171 (298)
T 3f66_A 100 GSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVAD 171 (298)
T ss_dssp SCCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECS
T ss_pred CceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECc
Confidence 678999999999999999976543 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~ 787 (869)
||.++........ .........||+.|+|||.+.+..++.++||||+|+++|+|++ |.+||...... .......
T Consensus 172 fg~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-~~~~~~~ 246 (298)
T 3f66_A 172 FGLARDMYDKEYY----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLL 246 (298)
T ss_dssp CGGGCCCSCGGGC----BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT-THHHHHH
T ss_pred ccccccccccchh----ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH-HHHHHHh
Confidence 9999866543211 1122344567889999999998899999999999999999999 55555432221 1111111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
.... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+.+..
T Consensus 247 ~~~~---------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 247 QGRR---------------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp TTCC---------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred cCCC---------------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1100 000112345688999999999999999999999999999887654
No 146
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-40 Score=351.73 Aligned_cols=257 Identities=21% Similarity=0.378 Sum_probs=203.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC-------eEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG-------MLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||+||+|++..++ ..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG-- 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC--
Confidence 357889999999999999999997666 57999999876666778899999999999999999999997653
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV-- 703 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-- 703 (869)
+..++||||+++|+|.+++..... .+++..++.++.|+++||+|||++ +|+||||||+||+++.++.
T Consensus 85 ---~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 85 ---DENILVQEFVKFGSLDTYLKKNKN-----CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp ---TCCEEEEECCTTCBHHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred ---CCCEEEEECCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 677999999999999999987653 389999999999999999999999 9999999999999998887
Q ss_pred ------EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 704 ------AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 704 ------~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+||+|||.+...... ....|++.|+|||++.+ ..++.++|||||||++|||++|..|+...
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~ 221 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPK------------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA 221 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCH------------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccceeeeccCcccccccCc------------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence 999999998654221 22457889999999887 67899999999999999999965554322
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
....... ..... ...... ..+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 222 ~~~~~~~-~~~~~--~~~~~~--------------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 222 LDSQRKL-QFYED--RHQLPA--------------------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp SCHHHHH-HHHHT--TCCCCC--------------------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred cchHHHH-HHhhc--cCCCCC--------------------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111111 10000 000000 012346789999999999999999999999998
Q ss_pred HHHhhhc
Q 002897 857 AREAFVS 863 (869)
Q Consensus 857 ~~~~~~~ 863 (869)
+...-.+
T Consensus 273 l~~p~~~ 279 (289)
T 4fvq_A 273 LFTPDLV 279 (289)
T ss_dssp CC-----
T ss_pred hcCCCCC
Confidence 8665443
No 147
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.7e-40 Score=368.52 Aligned_cols=248 Identities=26% Similarity=0.378 Sum_probs=204.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|.+.+.||+|+||.||+|++..+|+.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-----~ 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-----S 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----C
Confidence 367999999999999999999999999999999996432 23456789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 7999999999999999997654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|++....... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... ....
T Consensus 161 G~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~ 226 (476)
T 2y94_A 161 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFK 226 (476)
T ss_dssp SSCEECCTTC---------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHH
T ss_pred cchhhccccc---------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHH
Confidence 9998765432 2234569999999999988775 68999999999999999999999753211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........ .+...+..+.+++.+||+.||++|||++|+++
T Consensus 227 ~i~~~~~~------------------------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 227 KICDGIFY------------------------TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHTTCCC------------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcC------------------------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 11111000 00112345789999999999999999999987
No 148
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.9e-40 Score=342.71 Aligned_cols=258 Identities=28% Similarity=0.417 Sum_probs=209.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|+++++.++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ-----APIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----SSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccC-----CCeE
Confidence 357889999999999999999996 788999999975433 236789999999999999999999997543 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... .+++..++.++.|+++||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 99999999999999987643 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||++.+..++.++||||+|+++|+|++ |+.||..... ........
T Consensus 152 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i~ 219 (267)
T 3t9t_A 152 RFVLDDQY-------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDIS 219 (267)
T ss_dssp GGBCCHHH-------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHH
T ss_pred cccccccc-------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHHh
Confidence 86543210 12233457889999999988889999999999999999999 8999875321 11111111
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
... .. . .+..++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 220 ~~~-~~-~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 220 TGF-RL-Y---------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp TTC-CC-C---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCC-cC-C---------------------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 000 00 0 0012245678999999999999999999999999998764
No 149
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=348.53 Aligned_cols=245 Identities=22% Similarity=0.259 Sum_probs=193.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.++||+|+||+||+|++..+|+.||||++.... .........|+..+.++ +||||+++++++... ..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~-----~~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG-----GI 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-----CE
Confidence 57999999999999999999999899999999985432 22334555666666555 899999999997653 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+ +++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred EEEEEecc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 99999999 6799999877543 399999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..........
T Consensus 203 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~ 268 (311)
T 3p1a_A 203 LLVELGTAG---------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGY 268 (311)
T ss_dssp TCEECC---------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTC
T ss_pred eeeecccCC---------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccC
Confidence 998764432 2233468999999999876 7899999999999999999997776431 1111111110
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
. .+ .....++..+.+++.+||+.||++|||++|+++
T Consensus 269 ~--------~~------------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 269 L--------PP------------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp C--------CH------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred C--------Cc------------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0 00 111134567889999999999999999999986
No 150
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=365.13 Aligned_cols=262 Identities=20% Similarity=0.250 Sum_probs=206.1
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeec
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSS 622 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 622 (869)
+.+.....++|++.++||+|+||.||+|+++.+|+.||+|+++... ....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3445556789999999999999999999999999999999996432 2334568899999999999999999999764
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
....++||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 133 -----~~~~~lVmE~~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 133 -----ENYLYLVMEYYVGGDLLTLLSKFGE-----RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp -----SSEEEEEECCCCSCBHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred -----CCEEEEEEcCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 3789999999999999999986532 389999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-------CCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-------GSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
++||+|||+|+....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 200 ~vkL~DFGla~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp CEEECCCTTCEECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CEEEeechhheeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 999999999987654321 1223457999999999886 45689999999999999999999999975
Q ss_pred CccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCC---CCHHHHHH
Q 002897 776 MFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDR---MQMRDVVV 852 (869)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~ 852 (869)
.... ........... .. .-+ ......+.++.+++.+||. +|++| |+++|+++
T Consensus 273 ~~~~-~~~~~i~~~~~--~~---~~p------------------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 273 DSTA-ETYGKIVHYKE--HL---SLP------------------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp SSHH-HHHHHHHTHHH--HC---CCC----------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCHH-HHHHHHHhccc--Cc---CCC------------------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 3211 11111111000 00 000 0011234567899999999 99998 58998865
No 151
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=355.61 Aligned_cols=260 Identities=25% Similarity=0.411 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEE----EEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLV----AVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----avK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
.++|++.++||+|+||+||+|++..+++.| |+|.+... .....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 367999999999999999999998777655 66666432 33456789999999999999999999999764
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++|+||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred -CCceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEc
Confidence 347899999999999999987654 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....
T Consensus 160 DfG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~ 231 (327)
T 3lzb_A 160 DFGLAKLLGAEEKE------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSI 231 (327)
T ss_dssp CTTC----------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH
T ss_pred cCcceeEccCcccc------ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH
Confidence 99999876543211 22233457889999999999999999999999999999999 999997543221 1111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
...... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 232 ~~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 232 LEKGER--------------------------LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHTTCC--------------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHcCCC--------------------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 111000 001112345688999999999999999999999999998754
No 152
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.5e-40 Score=346.77 Aligned_cols=261 Identities=20% Similarity=0.367 Sum_probs=206.5
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
..++|.+.+.||+|+||+||+|++.. ++..||+|+++.. .....+.+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 35689999999999999999998753 3457999998754 33456788999999999999999999998653
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
...++||||+++++|.+++..... .+++..++.++.|+++||+|||++ +|+||||||+||+++.++.+||+
T Consensus 85 -~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (281)
T 3cc6_A 85 -EPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLG 155 (281)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEEC
T ss_pred -CCCEEEEecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeC
Confidence 346899999999999999986543 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||.+........ .......+++.|+|||++.+..++.++|||||||++|+|++ |+.||....... ....
T Consensus 156 Dfg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~ 226 (281)
T 3cc6_A 156 DFGLSRYIEDEDY-------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGV 226 (281)
T ss_dssp CCCGGGCC----------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHH
T ss_pred ccCCCcccccccc-------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHH
Confidence 9999987654321 12233457889999999988889999999999999999998 999997432221 1111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
...... ...+..+++.+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 227 ~~~~~~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 227 LEKGDR--------------------------LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp HHHTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HhcCCC--------------------------CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 110000 0000123456889999999999999999999999999987654
No 153
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.7e-40 Score=346.18 Aligned_cols=246 Identities=25% Similarity=0.361 Sum_probs=180.7
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+|+.||+|++... .....+.+.+|+++++.++||||+++++++.+. +.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK-----DE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----SC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----Ce
Confidence 6899999999999999999999999999999998643 233356789999999999999999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+ ++++.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred EEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 89999999 678888887654 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+....... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||..... ......
T Consensus 158 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~ 223 (275)
T 2eue_A 158 LSNIMTDGN---------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKN 223 (275)
T ss_dssp CC------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred cceeccCcc---------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 997654432 2233468999999999988765 7899999999999999999999975321 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... . .+...+..+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~-~-----------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 224 ISNGVY-T-----------------------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHTCC-C-----------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHhCCC-C-----------------------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 100000 0 00123456789999999999999999999976
No 154
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-40 Score=362.45 Aligned_cols=265 Identities=24% Similarity=0.429 Sum_probs=199.6
Q ss_pred CCCCCCeeeeecceEEEEEEECCC---CeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGEN---GMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.|.+.++||+|+||+||+|++..+ +..||||.++.. .....+.+.+|+.++++++||||+++++++... ...
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----EGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC----SSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC----CCC
Confidence 466778999999999999997532 346899998643 344567899999999999999999999987542 356
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++|+|.+++..... .+++.+++.++.||++||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred eEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 7899999999999999986543 388999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~ 789 (869)
+++........ .........+++.|+|||++.+..++.++|||||||++|||++ |.+||........ .......
T Consensus 238 ~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~-~~~~~~~ 312 (373)
T 3c1x_A 238 LARDMYDKEFD----SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQG 312 (373)
T ss_dssp ------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH-HHHHHTT
T ss_pred ccccccccccc----cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH-HHHHHcC
Confidence 99866443211 1112234557889999999998899999999999999999999 6777764322211 1111110
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhc
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVS 863 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 863 (869)
. . ...+..++..+.+++.+||+.||++|||+.|+++.|+++...+..
T Consensus 313 ~------~---------------------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 313 R------R---------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp C------C---------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred C------C---------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 0 0 000112445688999999999999999999999999999887654
No 155
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=8.7e-40 Score=357.78 Aligned_cols=283 Identities=21% Similarity=0.239 Sum_probs=210.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999999999999999996433 3345778999999999999999999999877655556788
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ |+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~-------~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccC-cCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 99999997 59999997643 89999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ .........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .........
T Consensus 175 a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 248 (364)
T 3qyz_A 175 ARVADPDHD-----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGIL 248 (364)
T ss_dssp CEECCGGGC-----BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHH
T ss_pred eEecCCCCC-----ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHh
Confidence 987654321 1122344579999999998654 458999999999999999999999997643221 111111111
Q ss_pred ccc---ccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPE---KVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ......+.........................+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 249 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00011000000000000000000000011123467889999999999999999999986
No 156
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.8e-40 Score=346.55 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||+||+|++ .++.||||+++... ....+.+.+|+.++++++||||+++++++... ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence 35799999999999999999999 59999999997543 34456789999999999999999999997643 2367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEEcc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
.++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+. + |+||||||+||+++.++.++++|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 8999999999999999987543 2489999999999999999999998 7 99999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCc---cccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASM---TGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
||++..... ....||+.|+|||++.+..++. ++|||||||++|||++|+.||.......
T Consensus 157 ~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----- 218 (271)
T 3kmu_A 157 ADVKFSFQS-------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME----- 218 (271)
T ss_dssp GGSCCTTSC-------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-----
T ss_pred ccceeeecc-------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-----
Confidence 998754222 2346899999999988765544 7999999999999999999997532211
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
............ ..+..++..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 219 ~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 219 IGMKVALEGLRP----------------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHSCCCC----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCCC----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111110000000 0011234568899999999999999999999999998764
No 157
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-40 Score=347.70 Aligned_cols=267 Identities=24% Similarity=0.367 Sum_probs=209.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCC---eEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENG---MLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.|...++||+|+||+||+|++..++ ..||+|++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----EGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----SSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----CCC
Confidence 4666789999999999999975444 379999986533 34457889999999999999999999997643 244
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+.+|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR-----NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 5899999999999999987543 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
.++....... ..........+++.|+|||.+.+..++.++|||||||++|+|++|..|+....... .........
T Consensus 170 ~~~~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~ 244 (298)
T 3pls_A 170 LARDILDREY----YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLAQG 244 (298)
T ss_dssp SSCTTTTGGG----GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHHTT
T ss_pred CcccccCCcc----cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhhcC
Confidence 9986544321 11123344568899999999999999999999999999999999666643322211 111111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
.. ...+..++..+.+++.+||+.||++|||+.|+++.|+++.++....
T Consensus 245 ~~--------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 245 RR--------------------------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred CC--------------------------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 00 0001123456889999999999999999999999999998887543
No 158
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=345.51 Aligned_cols=250 Identities=24% Similarity=0.405 Sum_probs=184.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS-----N 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-----S
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-----C
Confidence 467999999999999999999998899999999996432 22347789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... ++++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRVK-----PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 88999999999999999987543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+....... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||........ . ..
T Consensus 157 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~----~~ 223 (278)
T 3cok_A 157 GLATQLKMPH--------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L----NK 223 (278)
T ss_dssp TTCEECC------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------
T ss_pred cceeeccCCC--------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H----HH
Confidence 9998764322 112235689999999999988899999999999999999999999975322110 0 00
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... +.. .+...+..+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~------~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 224 VVLA------DYE------------------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CCSS------CCC------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Hhhc------ccC------------------CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 0000 000 00123456789999999999999999999986
No 159
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=359.77 Aligned_cols=277 Identities=17% Similarity=0.227 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeecccch-----------hhHHHHHHHHHHHhCCCCccceEEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLMQKG-----------ALKSFLTECEALRSIRHRNLIKIIT 618 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~ 618 (869)
.++|++.+.||+|+||.||+|.+.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999986 7889999998654321 1234668888999999999999999
Q ss_pred EeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 619 ICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 619 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
++... +.+....++||||+ +++|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 98763 34457899999999 999999998654 389999999999999999999999 99999999999999
Q ss_pred cCCC--cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 699 DHDM--VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 699 ~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+.++ .+||+|||+|+.+......... .........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~ 263 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHKQY-QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN 263 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCCCC-CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred ccCCCCcEEEEeCCCceecccccccccc-hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9887 9999999999876543211100 112224567999999999999989999999999999999999999999643
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCA 856 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 856 (869)
............... ........... ....++..+.+++.+||+.||++|||++||++.|+.
T Consensus 264 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 264 LKDPVAVQTAKTNLL-----DELPQSVLKWA-------------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp TTCHHHHHHHHHHHH-----HTTTHHHHHHS-------------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred ccccHHHHHHHHhhc-----ccccHHHHhhc-------------cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 222211111111110 00000000000 000244578899999999999999999999999987
Q ss_pred HHH
Q 002897 857 ARE 859 (869)
Q Consensus 857 ~~~ 859 (869)
+..
T Consensus 326 ~~~ 328 (345)
T 2v62_A 326 HGI 328 (345)
T ss_dssp TCC
T ss_pred cCC
Confidence 654
No 160
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-39 Score=341.61 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 80 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-----NIQ 80 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC-----CEE
Confidence 467999999999999999999999899999999997443 34457889999999999999999999997653 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCC
Confidence 99999999999999987643 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ ........|++.|+|||++.+..+ +.++||||||+++|+|++|+.||............+....
T Consensus 152 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (276)
T 2yex_A 152 ATVFRYNNR------ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225 (276)
T ss_dssp CEECEETTE------ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC
T ss_pred ccccCCCcc------hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc
Confidence 986543211 012334568999999999988775 7789999999999999999999976443322222222111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. . ......+..+.+++.+||+.||++|||++|+++
T Consensus 226 ~~------~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 226 TY------L--------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TT------S--------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cc------c--------------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00 0 001123456789999999999999999999976
No 161
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5e-40 Score=357.59 Aligned_cols=267 Identities=20% Similarity=0.245 Sum_probs=203.5
Q ss_pred HHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-----cchhhHHHHHHHHHHHhCCCCccceEEEEeecc
Q 002897 549 LSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-----QKGALKSFLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 549 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
+....++|++.+.||+|+||+||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 455678899999999999999999999999999999999643 234567899999999999999999999997653
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcc----------------------------------cccCCCHHHHHHHHH
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----------------------------------EVCNLSLIQTLNIAI 669 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------~~~~l~~~~~~~i~~ 669 (869)
...++||||+++|+|.+++....... ....+++..++.++.
T Consensus 101 -----~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 -----QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp -----SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred -----CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 78999999999999999986311100 011246788899999
Q ss_pred HHHHHHHHHHhcCCCCeEecCCCCCceeecCCC--cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC
Q 002897 670 DVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM--VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG 747 (869)
Q Consensus 670 ~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 747 (869)
||+.||+|||+. +|+||||||+||+++.++ .+||+|||.+..+....... ........||+.|+|||++.+
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~ 248 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE----YYGMTTKAGTPYFVAPEVLNT 248 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTC
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccc----cccccccCCCccccCchhhcc
Confidence 999999999999 999999999999998776 89999999998654322111 112344569999999999865
Q ss_pred --CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHH
Q 002897 748 --SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEEC 825 (869)
Q Consensus 748 --~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (869)
..++.++|||||||++|||++|+.||....... .......... .. ..+.....
T Consensus 249 ~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~-----~~-------------------~~~~~~~~ 303 (345)
T 3hko_A 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKL-----CF-------------------ENPNYNVL 303 (345)
T ss_dssp SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC-----CT-------------------TSGGGGGS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhccc-----cc-------------------CCcccccC
Confidence 678999999999999999999999997532211 1111111000 00 00111123
Q ss_pred HHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 826 LVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 826 ~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+..+.+++.+||+.||++|||+.|+++
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 456889999999999999999999987
No 162
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.2e-40 Score=351.18 Aligned_cols=275 Identities=20% Similarity=0.265 Sum_probs=200.1
Q ss_pred hcCCCCC-CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSS-NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++. +.||+|+||+||+|++..+++.||||+++.......+.+.+|++++.++ +||||+++++++... +.
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-----~~ 85 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-----DR 85 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC-----CE
Confidence 3578874 7899999999999999989999999999766555667899999999985 799999999997653 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV---AHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 707 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~ 156 (316)
T 2ac3_A 86 FYLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKIC 156 (316)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred EEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEE
Confidence 999999999999999998754 389999999999999999999999 9999999999999998776 9999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----CCCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
|||++............ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+..
T Consensus 157 Dfg~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 235 (316)
T 2ac3_A 157 DFDLGSGIKLNGDCSPI-STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG 235 (316)
T ss_dssp CTTCCC--------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC
T ss_pred EccCccccccCCccccc-cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc
Confidence 99999765432211100 0112234569999999999865 45889999999999999999999999764332211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ..+. ....+........ ..........++..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~--~~~~-----~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 236 WDRGE--ACPA-----CQNMLFESIQEGK---YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp C------CCHH-----HHHHHHHHHHHCC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccc--cchh-----HHHHHHHHHhccC---cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00000 0000 0000000000000 00000011134567889999999999999999999987
No 163
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.5e-40 Score=358.74 Aligned_cols=211 Identities=27% Similarity=0.358 Sum_probs=182.1
Q ss_pred CCcccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-----CCccce
Q 002897 541 FPMISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-----HRNLIK 615 (869)
Q Consensus 541 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 615 (869)
...+++.+.....++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+..|+++++.+. ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34455555556678999999999999999999999989999999999643 233466788999999986 999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSN 695 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 695 (869)
+++++... +..++||||+ +++|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+|
T Consensus 101 ~~~~~~~~-----~~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 167 (360)
T 3llt_A 101 YHGKFMYY-----DHMCLIFEPL-GPSLYEIITRNNYN----GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPEN 167 (360)
T ss_dssp EEEEEEET-----TEEEEEECCC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccceeeEC-----CeeEEEEcCC-CCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCccc
Confidence 99997654 6899999999 89999999876532 489999999999999999999999 99999999999
Q ss_pred eeecC-------------------------CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC
Q 002897 696 VLLDH-------------------------DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA 750 (869)
Q Consensus 696 Ill~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 750 (869)
||++. ++.+||+|||+|...... .....||+.|+|||++.+..+
T Consensus 168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCC
T ss_pred EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCC
Confidence 99975 789999999999864332 234568999999999999999
Q ss_pred CccccchhhhHHHHHHHcCCCCCCcC
Q 002897 751 SMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 751 ~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+.++|||||||++|+|++|+.||...
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999999753
No 164
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=344.53 Aligned_cols=264 Identities=23% Similarity=0.356 Sum_probs=211.0
Q ss_pred cCCCCCC-eeeeecceEEEEEEEC--CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSN-MVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
++|.+.+ .||+|+||.||+|.+. .++..||||+++... ....+.+.+|+++++.++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------E 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------S
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC------C
Confidence 4566666 9999999999999864 468899999997543 3456788999999999999999999999732 4
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 58999999999999999976543 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+......... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||...... .......
T Consensus 155 g~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~ 227 (287)
T 1u59_A 155 GLSKALGADDSY-----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIE 227 (287)
T ss_dssp TTCEECTTCSCE-----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHH
T ss_pred cceeeeccCcce-----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHh
Confidence 999877543211 112233457899999999988889999999999999999998 99999753221 1111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
. ... ...+..++..+.+++.+||+.||++|||+.|+++.|+++..+....
T Consensus 228 ~---~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 228 Q---GKR-----------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp T---TCC-----------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred c---CCc-----------------------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 0 000 0011134567889999999999999999999999999998776543
No 165
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-40 Score=357.73 Aligned_cols=277 Identities=20% Similarity=0.290 Sum_probs=200.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 629 (869)
.++|++.+.||+|+||.||+|.+..+|+.||||++... .....+++.+|+++++.++||||+++++++.... ..+..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999999999999999998542 3334577899999999999999999999986542 22335
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+ +++|.+++.... +++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEK-------LGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 679999999 789999998642 89999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+|+..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 173 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 240 (367)
T 1cm8_A 173 GLARQADSE-----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK 240 (367)
T ss_dssp TTCEECCSS-----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred ecccccccc-----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999865432 234568999999999877 679999999999999999999999997532211 1111111
Q ss_pred hh--cccccccccCccchhhh-hhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MV--LPEKVMEIVDPSLLLEV-RANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~--~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .+......+.......+ ..................+..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11 00001000000000000 000000000001111234567889999999999999999999987
No 166
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.2e-40 Score=364.28 Aligned_cols=254 Identities=22% Similarity=0.280 Sum_probs=195.6
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCCCCccceEEEEeec
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIRHRNLIKIITICSS 622 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 622 (869)
...++|.+.+.||+|+||+||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999999999999999996432 1122357899999999999999999998643
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 212 ------~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 212 ------EDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp ------SEEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred ------CceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 45789999999999999887654 389999999999999999999999 999999999999997544
Q ss_pred ---cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC---CCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 703 ---VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG---SEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 703 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
.+||+|||+|+..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...
T Consensus 277 ~~~~~kl~DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~ 347 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CcceEEEeecccceecCCC---------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 5999999999876432 22234579999999999853 56888999999999999999999999754
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
................ ........++..+.+++.+||+.||++|||++|+++
T Consensus 348 ~~~~~~~~~i~~~~~~------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 348 RTQVSLKDQITSGKYN------------------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp SSSCCHHHHHHTTCCC------------------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cchHHHHHHHhcCCCC------------------------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 3322222111111100 000111234567889999999999999999999987
No 167
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.4e-39 Score=361.74 Aligned_cols=361 Identities=30% Similarity=0.416 Sum_probs=276.3
Q ss_pred ccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcc
Q 002897 29 LAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHG 108 (869)
Q Consensus 29 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~ 108 (869)
+..+.+.+.++ ...+++|+.|++++|.++ .+|. +..+++|++|+|++|.+++..| +.++++|++|++++|.+.
T Consensus 31 ~~~~~~~~~i~--~~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~- 103 (466)
T 1o6v_A 31 LGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA- 103 (466)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-
T ss_pred hcccccccccC--hhHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccc-
Confidence 44445554443 245789999999999998 5564 8899999999999999996544 999999999999999998
Q ss_pred cCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcc
Q 002897 109 SLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLD 188 (869)
Q Consensus 109 ~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 188 (869)
.++. +.++++|++|++++|.+++..+ +.++++|++|++++|.+.++. .+..+++|++|+++ |.+....
T Consensus 104 ~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~----- 171 (466)
T 1o6v_A 104 DITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK----- 171 (466)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG-----
T ss_pred cChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch-----
Confidence 5553 8888999999999998886643 888899999999999887653 48888888888886 4444332
Q ss_pred hhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccC
Q 002897 189 FVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGW 268 (869)
Q Consensus 189 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 268 (869)
.+..+++|++|++++|++++. ..+..+++ |+.|++++|.+++..| ++.+++|+.|++++|++.+. ..+..
T Consensus 172 ---~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~-L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~ 241 (466)
T 1o6v_A 172 ---PLANLTTLERLDISSNKVSDI--SVLAKLTN-LESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLAS 241 (466)
T ss_dssp ---GGTTCTTCCEEECCSSCCCCC--GGGGGCTT-CSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGG
T ss_pred ---hhccCCCCCEEECcCCcCCCC--hhhccCCC-CCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhc
Confidence 377888888888888888743 23566654 7777777777765444 56677777777777776642 34666
Q ss_pred CCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccccccccccee
Q 002897 269 LKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFL 348 (869)
Q Consensus 269 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L 348 (869)
+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+++
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~----------------- 300 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE----------------- 300 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS-----------------
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc-----------------
Confidence 6777777777777765444 6666667777777666664322 666666666666666655
Q ss_pred cccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCccc
Q 002897 349 NLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLS 428 (869)
Q Consensus 349 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 428 (869)
+..+ ++.+++|+.|+|++|.+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|+++
T Consensus 301 --------~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 301 --------DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp --------CCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred --------Cchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccC
Confidence 3222 7788999999999999997655 88999999999999999864 57899999999999999999
Q ss_pred CCCccccccccccCeeccccccCcccC
Q 002897 429 GQIPKYLENLSFLEYLNLSYNHFEGEV 455 (869)
Q Consensus 429 ~~~p~~~~~l~~L~~l~l~~N~l~~~~ 455 (869)
+..| +..+++|+.|++++|++++.+
T Consensus 367 ~~~~--~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 367 DLTP--LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp BCGG--GTTCTTCCEEECCCEEEECCC
T ss_pred ccch--hhcCCCCCEEeccCCcccCCc
Confidence 8877 889999999999999999854
No 168
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.7e-40 Score=346.42 Aligned_cols=263 Identities=25% Similarity=0.435 Sum_probs=214.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||+||+|.+..++..||+|++.... ...+.+.+|+++++.++||||+++++++.. ....
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 84 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPF 84 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECS-----SSSE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcc-----CCCE
Confidence 4578999999999999999999999889999999996533 345788999999999999999999999754 3678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred EEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 999999999999999987543 2489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... .........
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~ 228 (288)
T 3kfa_A 158 SRLMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKD 228 (288)
T ss_dssp GGTSCSSSS-------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT
T ss_pred ceeccCCcc-------ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcc
Confidence 987654321 12233456889999999998899999999999999999999 99998753221 111111110
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
.. ...+..++..+.+++.+||+.||++|||++|+++.|+.+.+...
T Consensus 229 ~~--------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 229 YR--------------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp CC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CC--------------------------CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00 00111334568899999999999999999999999999877643
No 169
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.4e-40 Score=345.20 Aligned_cols=249 Identities=22% Similarity=0.353 Sum_probs=201.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+.++|++.+.||+|+||+||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-----
Confidence 3568999999999999999999999999999999986432 22346789999999999999999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred CEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 77899999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+...... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... ....
T Consensus 153 fg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~ 217 (279)
T 3fdn_A 153 FGWSVHAPSS----------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-----ETYK 217 (279)
T ss_dssp CCEESCC------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH
T ss_pred ccccccCCcc----------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH-----HHHH
Confidence 9998654332 123356899999999999999999999999999999999999999743211 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... ..+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 218 ~~~~~~~------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 218 RISRVEF------------------------TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHTCC------------------------CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHhCCC------------------------CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1100000 0001233467899999999999999999999974
No 170
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-40 Score=356.92 Aligned_cols=280 Identities=26% Similarity=0.370 Sum_probs=212.3
Q ss_pred CC-CCCCeeeeecceEEEEEEE----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 555 EF-SSSNMVGQGSFGTVFKGII----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 555 ~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
+| ++.++||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.+. +.
T Consensus 31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 107 (318)
T 3lxp_A 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GA 107 (318)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---TT
T ss_pred HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---CC
Confidence 44 8899999999999988764 3578999999997543 34457789999999999999999999998753 24
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||+++|+|.+++.... +++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~D 177 (318)
T 3lxp_A 108 ASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGD 177 (318)
T ss_dssp TEEEEEECCCTTCBHHHHGGGSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ceEEEEEecccCCcHHHHHhhCC-------CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECC
Confidence 67899999999999999997653 89999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+......... ........|+..|+|||++.+..++.++|||||||++|+|++|+.||............+..
T Consensus 178 fg~a~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~ 252 (318)
T 3lxp_A 178 FGLAKAVPEGHEY-----YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ 252 (318)
T ss_dssp GGGCEECCTTCSE-----EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCC
T ss_pred ccccccccccccc-----cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccc
Confidence 9999877554211 11233455788999999999888999999999999999999999998643211000000000
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhccc
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 865 (869)
.. .. ...+..... .......+..++..+.+++.+||+.||++|||+.|+++.|+++.+.+....
T Consensus 253 ~~-----~~--~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~ 316 (318)
T 3lxp_A 253 GQ-----MT--VLRLTELLE------RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316 (318)
T ss_dssp HH-----HH--HHHHHHHHH------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred cc-----hh--HHHHHHHHh------cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence 00 00 000000000 000111122345678999999999999999999999999999998876543
No 171
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-39 Score=347.67 Aligned_cols=263 Identities=20% Similarity=0.259 Sum_probs=201.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~----- 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID----- 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-----
Confidence 3578999999999999999999999899999999996442 23347789999999999999999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred CeEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 68899999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+........ .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 178 fg~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 248 (309)
T 2h34_A 178 FGIASATTDEKL-------TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN 248 (309)
T ss_dssp CCC-----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH
T ss_pred CccCcccccccc-------ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc
Confidence 999976544321 1223456899999999999999999999999999999999999999753211 1111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHhh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-QMRDVVVKLCAAREAF 861 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 861 (869)
...+ .+ ......++..+.+++.+||+.||++|| |++++++.|+++.+..
T Consensus 249 ~~~~-------~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 249 QAIP-------RP-----------------STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp SCCC-------CG-----------------GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred cCCC-------Cc-----------------cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0000 00 000112345688999999999999999 9999999999876554
No 172
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=356.66 Aligned_cols=244 Identities=21% Similarity=0.319 Sum_probs=202.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCCCCccceEEEEeecc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|++++++++||||+++++++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~- 100 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN- 100 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence 4568999999999999999999999999999999997542 1133467789999999999999999999764
Q ss_pred ccCCCceEEEEeecccCC-CHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 002897 624 DFNGVDFKAIVYDFMQNG-SLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM 702 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 702 (869)
....++||||+.+| +|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 101 ----~~~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 101 ----QGFFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp ----SSEEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred ----CCEEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 37889999999777 9999998764 389999999999999999999999 999999999999999999
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
.+||+|||.+....... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......
T Consensus 168 ~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-- 236 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGK---------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-- 236 (335)
T ss_dssp CEEECCCTTCEECCTTC---------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--
T ss_pred cEEEeecccceECCCCC---------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--
Confidence 99999999998765432 2233568999999999988876 88999999999999999999999642110
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .. .+..++..+.+++.+||+.||++|||++|+++.
T Consensus 237 -----~~~~--------~~--------------------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -----VEAA--------IH--------------------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----TTTC--------CC--------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----Hhhc--------cC--------------------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00 000123467899999999999999999999874
No 173
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.4e-40 Score=352.82 Aligned_cols=249 Identities=20% Similarity=0.265 Sum_probs=192.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhCCCCccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSIRHRNLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||.||+|++. .+|+.||+|+++... ......+.+|+.+++.++||||+++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 468999999999999999999985 589999999996432 23345678999999999999999999997653
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 705 (869)
+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 94 ---~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 94 ---GKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ---SCEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 78999999999999999998654 389999999999999999999999 999999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .
T Consensus 162 l~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~ 228 (327)
T 3a62_A 162 LTDFGLCKESIHDG--------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-----K 228 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-----H
T ss_pred EEeCCcccccccCC--------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-----H
Confidence 99999997543221 1223456999999999999989999999999999999999999999753221 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
.......... . .+...+..+.+++.+||+.||++|| +++|+++
T Consensus 229 ~~~~i~~~~~-~-----------------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 229 TIDKILKCKL-N-----------------------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHHTCC-C-----------------------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHHhCCC-C-----------------------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1111110000 0 0012345678999999999999999 7778765
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.9e-40 Score=361.44 Aligned_cols=288 Identities=21% Similarity=0.321 Sum_probs=198.2
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNG 627 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 627 (869)
...++|++.+.||+|+||.||+|.+..+|+.||||++... ......++.+|+.+++.+. ||||+++++++... +
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---N 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT---T
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC---C
Confidence 3457899999999999999999999999999999998532 3344567889999999997 99999999998643 3
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++||||++ |+|.+++.... +++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRANI-------LEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHTC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 357899999997 59999998643 89999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCc-------------cccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCC
Q 002897 708 DFGLAKFLPARPLDTV-------------VETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
|||+|+.......... ...........||+.|+|||++.+ ..++.++||||+||++|||++|++||
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 9999987643211000 001122344679999999999876 57899999999999999999999999
Q ss_pred CcCccCCchHHHhhhhhc-cc-c-cccccCc---cchhhhhhcccccCCCccchH-------------HHHHHHHHHHHh
Q 002897 774 DSMFHEGLTLHEFSKMVL-PE-K-VMEIVDP---SLLLEVRANNSMSRGGERVKI-------------EECLVAVIRIGV 834 (869)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~-~~-~-~~~~~d~---~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~li~ 834 (869)
...... ..........- +. . +.....+ ..................... ..+++.+.+++.
T Consensus 232 ~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 232 PGSSTM-NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CCSSHH-HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCCCHH-HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 753221 11111111110 00 0 0000000 000000000000000000000 023457889999
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 002897 835 VCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 835 ~cl~~dP~~RPs~~evl~~ 853 (869)
+||+.||++|||++|+++.
T Consensus 311 ~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HhhccCcccCCCHHHHhCC
Confidence 9999999999999999864
No 175
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.5e-40 Score=348.57 Aligned_cols=265 Identities=26% Similarity=0.350 Sum_probs=209.5
Q ss_pred HhcCCCCCC-eeeeecceEEEEEEE--CCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 552 ATSEFSSSN-MVGQGSFGTVFKGII--GENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 552 ~~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
..++|.+.+ .||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|+++++.++||||+++++++..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 89 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---- 89 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC----
Confidence 346788887 999999999999954 5568999999996543 3345788999999999999999999999732
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
+..++||||+++++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 90 --~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl 158 (291)
T 1xbb_A 90 --ESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKI 158 (291)
T ss_dssp --SSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEE
T ss_pred --CCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEE
Confidence 56889999999999999998754 389999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~ 785 (869)
+|||.+.......... .......+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .
T Consensus 159 ~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~ 228 (291)
T 1xbb_A 159 SDFGLSKALRADENYY-----KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----E 228 (291)
T ss_dssp CCCTTCEECCTTCSEE-----EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----H
T ss_pred ccCCcceeeccCCCcc-----cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----H
Confidence 9999998765443111 11223346789999999988889999999999999999999 99999753221 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcc
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSM 864 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 864 (869)
.......... ...+..++..+.+++.+||+.||++|||+.|+++.|+.+.......
T Consensus 229 ~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 229 VTAMLEKGER-----------------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp HHHHHHTTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-----------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 1111110000 0001134456889999999999999999999999999998776544
No 176
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.6e-39 Score=359.08 Aligned_cols=354 Identities=19% Similarity=0.217 Sum_probs=265.6
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+++|++|+|++|.+++. | .|..+++|++|+|++|+|++. | ++.+++|++|+|++|++++. | +.++++|++|
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred HcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 678888888888888853 4 678888888888888888853 3 77888888888888888754 3 7788888888
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHL 179 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 179 (869)
+|++|++. .+| +..+++|++|++++|++++. .++++++|++|++++|+..+.. .+..+++|++|++++|++
T Consensus 112 ~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 112 NCDTNKLT-KLD---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp ECCSSCCS-CCC---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCC
T ss_pred ECCCCcCC-eec---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcc
Confidence 88888887 455 67778888888888888764 3777788888888888543333 467777888888888877
Q ss_pred CCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcce
Q 002897 180 GNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLI 259 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 259 (869)
+.++ +..+++|++|++++|++++. .+..+++ |+.|++++|.+++ +| +..+++|+.|++++|++.
T Consensus 183 ~~l~---------l~~l~~L~~L~l~~N~l~~~---~l~~l~~-L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 183 TELD---------VSQNKLLNRLNCDTNNITKL---DLNQNIQ-LTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp CCCC---------CTTCTTCCEEECCSSCCSCC---CCTTCTT-CSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCS
T ss_pred ceec---------cccCCCCCEEECcCCcCCee---ccccCCC-CCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCC
Confidence 7653 45677788888888877754 2555554 7777777777775 44 677777777777777777
Q ss_pred ecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccc
Q 002897 260 GTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQIL 339 (869)
Q Consensus 260 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (869)
+.. ++.+++|+.|++++| +|+.|++++|++.+.+| ++.+++|+.|++++|++.+.+|...
T Consensus 247 ~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~- 306 (457)
T 3bz5_A 247 ELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQA- 306 (457)
T ss_dssp CCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTT-
T ss_pred CcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCC-
Confidence 543 445667777777665 45678888888776666 5788999999999998776555321
Q ss_pred ccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccE
Q 002897 340 SVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKV 419 (869)
Q Consensus 340 ~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 419 (869)
..++.|+ ++++++|++|++++|++++ ++ ++.+++|+.|++++|+|++ ++.|..
T Consensus 307 ---~~L~~L~-------------l~~~~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~ 359 (457)
T 3bz5_A 307 ---AGITELD-------------LSQNPKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGK 359 (457)
T ss_dssp ---CCCSCCC-------------CTTCTTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGG
T ss_pred ---CcceEec-------------hhhcccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------cccccc
Confidence 2222233 4555789999999999997 43 8999999999999999985 356777
Q ss_pred EEccCCcccCCCccccccccccCeeccccccCcccCCCC
Q 002897 420 LDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 420 L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~ 458 (869)
|++++|.++|. .++..|..+++++|+++|.+|..
T Consensus 360 L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 360 IPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred ccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 88999999976 35677899999999999998864
No 177
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-40 Score=355.62 Aligned_cols=281 Identities=22% Similarity=0.283 Sum_probs=199.4
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-----hhhHHHHHHHHHHHhCCCCccceEEEEeeccc
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-----GALKSFLTECEALRSIRHRNLIKIITICSSID 624 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 624 (869)
....++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+.+|+++++.++||||+++++++..
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-- 83 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC--
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee--
Confidence 3445789999999999999999999998999999999964322 123467899999999999999999999754
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
....++||||+++ +|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+
T Consensus 84 ---~~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 84 ---KSNISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp ---TTCCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred ---CCceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 3678999999976 89999877543 388899999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
||+|||+++...... .......||+.|+|||++.+. .++.++|||||||++|+|++|.+||....... ..
T Consensus 152 kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~ 222 (346)
T 1ua2_A 152 KLADFGLAKSFGSPN--------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QL 222 (346)
T ss_dssp EECCCGGGSTTTSCC--------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred EEEecccceeccCCc--------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HH
Confidence 999999998764332 223345689999999998764 48999999999999999999999987532211 11
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
..............+.+..-..+..................++..+.+++.+||+.||++|||++|+++.
T Consensus 223 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1111111000000000000000000000000000000112344678999999999999999999999874
No 178
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.7e-40 Score=354.53 Aligned_cols=278 Identities=21% Similarity=0.322 Sum_probs=196.4
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
....++|++.++||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 105 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN---- 105 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET----
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC----
Confidence 345678999999999999999999999999999999996443 22345678999999999999999999997654
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-----CCC
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-----HDM 702 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-----~~~ 702 (869)
...++||||+++ +|.+++..... +++..++.++.||+.||+|||+. +|+||||||+||+++ .++
T Consensus 106 -~~~~lv~e~~~~-~L~~~~~~~~~------~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 174 (329)
T 3gbz_A 106 -HRLHLIFEYAEN-DLKKYMDKNPD------VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETP 174 (329)
T ss_dssp -TEEEEEEECCSE-EHHHHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CC
T ss_pred -CEEEEEEecCCC-CHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccc
Confidence 789999999975 99999987653 89999999999999999999999 999999999999994 555
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
.+||+|||.|+...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 175 ~~kl~Dfg~a~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~- 245 (329)
T 3gbz_A 175 VLKIGDFGLARAFGIPI--------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID- 245 (329)
T ss_dssp EEEECCTTHHHHHC-------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred eEEECcCCCccccCCcc--------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-
Confidence 69999999998764332 222345689999999998875 48999999999999999999999997533221
Q ss_pred hHHHhhhhh-cccccccccCccchhhhhhcc-c-ccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 782 TLHEFSKMV-LPEKVMEIVDPSLLLEVRANN-S-MSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 782 ~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... .+.. ...........+.... . ................+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 246 QLFKIFEVLGLPDD-TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHCCCCT-TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhCCCch-hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 111111111 0000 0000000000000000 0 0000000011123467889999999999999999999976
No 179
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.9e-40 Score=371.51 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=195.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.++||+|+||.||+|.+..+|+.||||+++.. .......+.+|+.+++.++||||+++++++... +
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-----~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----D 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-----T
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-----C
Confidence 46799999999999999999999999999999999743 333456778999999999999999999997654 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . ||+||||||+|||++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999997654 38999999999999999999998 7 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 293 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~ 359 (446)
T 4ejn_A 293 FGLCKEGIKDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFE 359 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred CCCceeccCCC--------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHH
Confidence 99997543321 223446799999999999999999999999999999999999999965321 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
........ .+...+..+.+++.+||+.||++|| |++|+++
T Consensus 360 ~i~~~~~~------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 360 LILMEEIR------------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHCCCC------------------------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHhCCCC------------------------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11110000 0012335678999999999999999 9999986
No 180
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.2e-40 Score=357.35 Aligned_cols=251 Identities=27% Similarity=0.328 Sum_probs=194.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHH-HHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEA-LRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|+++.+++.||+|+++... ......+..|..+ ++.++||||+++++++.+ .
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~-----~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT-----A 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC-----S
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe-----C
Confidence 467999999999999999999999999999999997543 2234556677776 567899999999999765 3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|++||+|
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 78999999999999999998754 389999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 183 FG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~ 249 (373)
T 2r5t_A 183 FGLCKENIEHN--------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYD 249 (373)
T ss_dssp CCBCGGGBCCC--------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHH
T ss_pred CccccccccCC--------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHH
Confidence 99998543221 233456799999999999999999999999999999999999999975321 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
........ +. ...+..+.+++.+||+.||++||++.+.++.+
T Consensus 250 ~i~~~~~~--~~----------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 250 NILNKPLQ--LK----------------------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp HHHHSCCC--CC----------------------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred HHHhcccC--CC----------------------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 11111000 00 01234577999999999999999986544433
No 181
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-39 Score=352.37 Aligned_cols=268 Identities=23% Similarity=0.371 Sum_probs=211.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC-------CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEeecc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG-------ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICSSI 623 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 623 (869)
.++|++.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~- 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc-
Confidence 478999999999999999999975 367889999997543 34457789999999999 89999999999754
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcc----------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
.+..++||||+++|+|.+++....... ....+++.+++.++.||++||+|||+. +|+||||||
T Consensus 113 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 113 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp ----SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred ----CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 367899999999999999998764310 112489999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||.++........ .......+++.|+|||++.+..++.++|||||||++|+|++ |+.|
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 259 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSE------ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ceEEEcCCCCEEEccccccccccccccc------cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999876543210 12233457889999999988889999999999999999999 9999
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|..... .+........... ..+..++..+.+++.+||+.||++|||+.|+++
T Consensus 260 ~~~~~~-----~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 260 YPGIPV-----EELFKLLKEGHRM-----------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp STTCCH-----HHHHHHHHHTCCC-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCcCCH-----HHHHHHHhcCCCC-----------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 865321 1111111100000 001123456889999999999999999999999
Q ss_pred HHHHHHHhhh
Q 002897 853 KLCAAREAFV 862 (869)
Q Consensus 853 ~L~~~~~~~~ 862 (869)
.|+++.....
T Consensus 312 ~L~~l~~~~~ 321 (334)
T 2pvf_A 312 DLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHhccc
Confidence 9999977644
No 182
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.5e-40 Score=374.57 Aligned_cols=259 Identities=25% Similarity=0.444 Sum_probs=211.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+|++.++||+|+||.||+|++..++..||||+++... ...+.+.+|+.++++++||||+++++++... ...+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----SSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecC-----CcEE
Confidence 457888999999999999999998889999999997543 2357899999999999999999999997653 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 293 lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred EEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 99999999999999987542 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... ..........
T Consensus 366 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~ 436 (495)
T 1opk_A 366 RLMTGDTY-------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDY 436 (495)
T ss_dssp ECCTTCCE-------ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTC
T ss_pred eeccCCce-------eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC
Confidence 87644321 11223456789999999988889999999999999999999 99998753221 1111111000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
....+..++..+.+++.+||+.||++|||+.||++.|+.+.+
T Consensus 437 --------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 437 --------------------------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp --------------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred --------------------------CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 001112345678899999999999999999999999987643
No 183
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=355.78 Aligned_cols=275 Identities=19% Similarity=0.268 Sum_probs=197.4
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch-hhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG-ALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.+.||+|+||+||+|++..+++.||+|++...... ....+.+|+++++.++||||+++++++... ...+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE-----KSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS-----SCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC-----CEEE
Confidence 5789999999999999999999989999999999643322 122456799999999999999999997643 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 77 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEecccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 9999997 599999987654 389999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ......+...
T Consensus 148 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~ 218 (324)
T 3mtl_A 148 RAKSIPT--------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILG 218 (324)
T ss_dssp ECC--------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred ccccCCc--------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 8654322 22234568999999999876 568999999999999999999999997643221 1111111110
Q ss_pred ---ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 ---PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ---~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
+..+....+.......... ...........+..+..+.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTYNYP-KYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHTCCC-CCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCChHhchhhhcchhhcccccc-cccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1111111111000000000 00000001111234567889999999999999999999987
No 184
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.4e-39 Score=341.65 Aligned_cols=260 Identities=21% Similarity=0.270 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc------hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK------GALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
++|++.+.||+|+||.||+|++..+|+.||+|+++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK---- 80 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC----
Confidence 578999999999999999999998999999999864321 1357889999999999999999999997653
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----c
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM----V 703 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~ 703 (869)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 81 -~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 81 -TDVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred -CeEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 67899999999999999997644 389999999999999999999999 999999999999998877 8
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL 783 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~ 783 (869)
+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 151 ~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---- 217 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ---- 217 (283)
T ss_dssp EEECCCTTCEECC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----
T ss_pred eEEEecccceeccCCC---------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH----
Confidence 9999999998764432 123346899999999999989999999999999999999999999753211
Q ss_pred HHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HHHHHHHhh
Q 002897 784 HEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV--KLCAAREAF 861 (869)
Q Consensus 784 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~~~~~~ 861 (869)
.......... ...+ .......+..+.+++.+||+.||++|||+.|+++ .++.++...
T Consensus 218 -~~~~~~~~~~--~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~ 276 (283)
T 3bhy_A 218 -ETLTNISAVN--YDFD------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276 (283)
T ss_dssp -HHHHHHHTTC--CCCC------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred -HHHHHhHhcc--cCCc------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence 1111110000 0000 0111133456889999999999999999999998 456655443
No 185
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-39 Score=343.08 Aligned_cols=254 Identities=23% Similarity=0.314 Sum_probs=197.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|.+.++||+|+||+||+|.+..++..||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY-----HNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----SEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC-----CeE
Confidence 357999999999999999999999999999999997543 33457889999999999999999999997643 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEcc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGD 708 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~D 708 (869)
++||||+++|+|.+++...... ...+++..++.++.|+++||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 9999999999999998654211 12489999999999999999999999 99999999999999 4567899999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
||.+....... ......||+.|+|||++. +.++.++|||||||++|+|++|+.||...... ....
T Consensus 171 fg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~~~~ 235 (285)
T 3is5_A 171 FGLAELFKSDE---------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----EVQQ 235 (285)
T ss_dssp CCCCCC-------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred eecceecCCcc---------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----HHHh
Confidence 99997654322 223456899999999886 46899999999999999999999999753221 1111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......... ......++.+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~---------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 236 KATYKEPNYA---------------------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHCCCCCC---------------------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hhccCCcccc---------------------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1100000000 000012346779999999999999999999985
No 186
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=366.33 Aligned_cols=318 Identities=18% Similarity=0.172 Sum_probs=200.3
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++++++ +||..++ .+++.|+|++|+|+++.+..|.++++|++|+|++|.|++..|.+|+++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 356667777 6776654 467777777777776666777777777777777777776667777777777777777777
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
++++.+..|.++++|++|+|++|++. .++...|.++++|++|++++|.++...+..|.++++|++|+|++|+++++.+.
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCccCcccccCCCCCCEEECCCCccc-cCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77655556677777777777777776 44445566666666666666666666666666666666666666666666555
Q ss_pred CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCcc
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPG 241 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 241 (869)
.|..+++|+.|++++|.+..++.. .|..+++|++|++++|.+.+.+|.......+ |+.|++++|.++...+..
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~------~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~ 243 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDY------SFKRLYRLKVLEISHWPYLDTMTPNCLYGLN-LTSLSITHCNLTAVPYLA 243 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTT------CSCSCTTCCEEEEECCTTCCEECTTTTTTCC-CSEEEEESSCCCSCCHHH
T ss_pred HhcccCCCcEEeCCCCcCcEeChh------hcccCcccceeeCCCCccccccCcccccCcc-ccEEECcCCcccccCHHH
Confidence 566666666666666666655443 4556666666666666555555444444332 666666666665333344
Q ss_pred ccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccc
Q 002897 242 LGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLI 321 (869)
Q Consensus 242 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 321 (869)
|..+++|+.|+|++|.+.+..+..|..+++|++|+|++|++++..|..|.++++|+.|++++|++++..+..|..+++|+
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 323 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLE 323 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccC
Confidence 55555666666666655555555555555566666666655555555555555555555555555544444555555555
Q ss_pred eeeccCcccC
Q 002897 322 MLTLSKNKLD 331 (869)
Q Consensus 322 ~L~l~~N~l~ 331 (869)
.|++++|++.
T Consensus 324 ~L~l~~N~l~ 333 (477)
T 2id5_A 324 TLILDSNPLA 333 (477)
T ss_dssp EEECCSSCEE
T ss_pred EEEccCCCcc
Confidence 5555555554
No 187
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.2e-39 Score=352.96 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=198.9
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..|+..+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE-----HT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----Ce
Confidence 45888999999999999999998899999999996432 33446789999999999999999999997654 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||++ |++.+++..... ++++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred EEEEEecCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 899999997 688888865433 489999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
++...... ....||+.|+|||++. ++.++.++|||||||++|||++|+.||...... ....
T Consensus 200 ~a~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~----~~~~ 263 (348)
T 1u5q_A 200 SASIMAPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALY 263 (348)
T ss_dssp TCBSSSSB------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH
T ss_pred CceecCCC------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHH
Confidence 99765321 2346899999999874 567899999999999999999999998643211 1111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
... ... .+.. ....++..+.+++.+||+.||++|||++|+++.
T Consensus 264 ~~~-~~~-----~~~~-----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 264 HIA-QNE-----SPAL-----------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHH-HSC-----CCCC-----------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHH-hcC-----CCCC-----------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 100 000 0000 001234567899999999999999999999864
No 188
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.9e-40 Score=356.49 Aligned_cols=275 Identities=22% Similarity=0.320 Sum_probs=215.0
Q ss_pred HHHHhcCCCCCCeeeeecceEEEEEEECCCCe-----EEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEEEee
Q 002897 549 LSKATSEFSSSNMVGQGSFGTVFKGIIGENGM-----LVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIITICS 621 (869)
Q Consensus 549 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 621 (869)
.....++|++.+.||+|+||.||+|.+..+++ .||+|++.... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33445789999999999999999999976554 79999996543 33457789999999999 8999999999975
Q ss_pred ccccCCCceEEEEeecccCCCHHHHHhhCCCcc--------cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 622 SIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL--------EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 622 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
.. +..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 121 ~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 121 HG-----GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp SS-----SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred cC-----CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 43 67899999999999999997642110 012479999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~p 772 (869)
+||+++.++.+||+|||++......... .......||+.|+|||++.+..++.++|||||||++|||+| |..|
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 266 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred ceEEECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999865433211 12233457889999999988899999999999999999999 9999
Q ss_pred CCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
|....... ............ ..+..++..+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~-~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 267 YPGILVNS-KFYKLVKDGYQM--------------------------AQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp STTCCSSH-HHHHHHHHTCCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CcccchhH-HHHHHHhcCCCC--------------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 87543221 111111111000 000112456789999999999999999999999
Q ss_pred HHHHHHHhhhcc
Q 002897 853 KLCAAREAFVSM 864 (869)
Q Consensus 853 ~L~~~~~~~~~~ 864 (869)
.|+++.+.....
T Consensus 320 ~L~~~~~~~~~~ 331 (333)
T 2i1m_A 320 FLQEQAQEDRRE 331 (333)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhhcc
Confidence 999988776544
No 189
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.3e-39 Score=369.00 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.++||+|+||.||+|++..+|+.||+|++.... ......+.+|+++++.++||||+++++++.+ .+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET-----KD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-----CC
Confidence 467999999999999999999999999999999996432 2344678899999999999999999998754 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 89999999999999999986542 2489999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 331 Gla~~~~~~~---------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~ 400 (576)
T 2acx_A 331 GLAVHVPEGQ---------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERL 400 (576)
T ss_dssp TTCEECCTTC---------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHH
T ss_pred ccceecccCc---------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHH
Confidence 9998765432 1233579999999999999899999999999999999999999997643221 11111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 852 (869)
..... .. .+...+..+.+++.+||+.||++|| +++||++
T Consensus 401 i~~~~------~~------------------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 401 VKEVP------EE------------------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHCC------CC------------------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred hhccc------cc------------------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11000 00 0012345678999999999999999 7888875
No 190
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=367.14 Aligned_cols=347 Identities=20% Similarity=0.219 Sum_probs=238.5
Q ss_pred EEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCc
Q 002897 98 FIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNN 177 (869)
Q Consensus 98 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n 177 (869)
.++.+++.+. .+|.+. .++++.|+|++|+|++..+..|.++++|++|+|++|.++++.+..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 3444444444 444321 134455555555555555566666677777777777766666666777777777777777
Q ss_pred cCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCc
Q 002897 178 HLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQ 257 (869)
Q Consensus 178 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 257 (869)
.++.++.. .|.++++|++|+|++|++++..+..+..+.+ |+.|++++|.+++..+..|..+++|+.|++++|+
T Consensus 91 ~l~~~~~~------~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 91 RLKLIPLG------VFTGLSNLTKLDISENKIVILLDYMFQDLYN-LKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CCCSCCTT------SSTTCTTCCEEECTTSCCCEECTTTTTTCTT-CCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred cCCccCcc------cccCCCCCCEEECCCCccccCChhHcccccc-CCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 76666543 4566677777777777776666666666654 6666666666666666667777777777777777
Q ss_pred ceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcc
Q 002897 258 LIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQ 337 (869)
Q Consensus 258 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 337 (869)
+.+..+..+..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.++..+....+|+.|++++|+++
T Consensus 164 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~------ 237 (477)
T 2id5_A 164 LTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT------ 237 (477)
T ss_dssp CSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC------
T ss_pred CcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc------
Confidence 76655556777777777777777777666666777777777777776665555555555556666666666655
Q ss_pred ccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccc
Q 002897 338 ILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSI 417 (869)
Q Consensus 338 ~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 417 (869)
+..+..+.++++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|
T Consensus 238 -------------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (477)
T 2id5_A 238 -------------------AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYL 298 (477)
T ss_dssp -------------------SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTC
T ss_pred -------------------ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccC
Confidence 2333567777888888888888887777778888888888888888887778888888888
Q ss_pred cEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCCCCC
Q 002897 418 KVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCGGLD 480 (869)
Q Consensus 418 ~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 480 (869)
+.|+|++|+|++..+..|..+++|+.|++++|++.+.++..+.+.......+.++...|+.+.
T Consensus 299 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 299 RVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 888888888887777777888888888888888887766544444445566777777776544
No 191
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=348.59 Aligned_cols=278 Identities=19% Similarity=0.207 Sum_probs=212.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++........+.+.+|+++++.++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 46899999999999999999999889999999999776666678899999999999999999999998642 12346789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++...... ...+++.+++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999863211 12489999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCCcc-ccCCCCCCccCcccccCCcccCCCC---CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 713 KFLPARPLDTVV-ETPSSSSGIKGTVGYIAPEYGTGSE---ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 713 ~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
............ ..........||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 261 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence 765321100000 0000012235799999999987654 689999999999999999999999643222211111111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
.... .+....++..+.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 262 ~~~~--------------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 262 NQLS--------------------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp CC----------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred ccCC--------------------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 1000 00001234568899999999999999999999999998865543
No 192
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.9e-40 Score=370.75 Aligned_cols=260 Identities=23% Similarity=0.424 Sum_probs=210.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~------~~~ 257 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPI 257 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS------SSC
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC------Ccc
Confidence 3467889999999999999999996 68889999997543 345789999999999999999999998752 567
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred EEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 999999999999999975431 2388999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
|+....... .......++..|+|||++.+..++.++|||||||++|||+| |+.||...... +.....
T Consensus 331 a~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i 398 (454)
T 1qcf_A 331 ARVIEDNEY-------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRAL 398 (454)
T ss_dssp GGGBCCHHH-------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHH
T ss_pred ceEcCCCce-------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence 987643210 11223446789999999988899999999999999999999 99999753211 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
... ...+.+..++..+.+++.+||+.||++|||+++|++.|+.+..+.
T Consensus 399 ~~~-----------------------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 399 ERG-----------------------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHT-----------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HcC-----------------------CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 000 000111234567889999999999999999999999999876543
No 193
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-40 Score=356.27 Aligned_cols=277 Identities=14% Similarity=0.151 Sum_probs=211.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC--------CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccce---------
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE--------NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIK--------- 615 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 615 (869)
.++|++.+.||+|+||.||+|++.. .++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999986 4889999998643 45789999999999999988
Q ss_pred ------EEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 002897 616 ------IITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHG 689 (869)
Q Consensus 616 ------~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 689 (869)
+++++.. .....++||||+ +++|.+++..... ..+++.+++.++.||+.||+|||++ +|+||
T Consensus 116 ~~~i~~~~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~ 183 (352)
T 2jii_A 116 LLAIPTCMGFGVH----QDKYRFLVLPSL-GRSLQSALDVSPK----HVLSERSVLQVACRLLDALEFLHEN---EYVHG 183 (352)
T ss_dssp TCSCCCCCEEEEE----TTTEEEEEEECC-CEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred ccCccchhhcccc----CCcEEEEEecCC-CcCHHHHHHhCCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCC
Confidence 4555443 247889999999 9999999987521 2499999999999999999999999 99999
Q ss_pred CCCCCceeecCCC--cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHH
Q 002897 690 DLKPSNVLLDHDM--VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMF 767 (869)
Q Consensus 690 Dlkp~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~ 767 (869)
||||+||+++.++ .+||+|||+++........... .........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 262 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY-VEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL 262 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC-CTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc-cccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 9999999999998 9999999999876543211110 112234457999999999999999999999999999999999
Q ss_pred cCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 768 SRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 768 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
+|+.||.................. .......+... ....++..+.+++.+||+.||++|||+
T Consensus 263 ~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 324 (352)
T 2jii_A 263 YGFLPWTNCLPNTEDIMKQKQKFV-DKPGPFVGPCG-----------------HWIRPSETLQKYLKVVMALTYEEKPPY 324 (352)
T ss_dssp HSCCTTGGGTTCHHHHHHHHHHHH-HSCCCEECTTS-----------------CEECCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred hCCCCcccCCcCHHHHHHHHHhcc-CChhhhhhhcc-----------------ccCCCcHHHHHHHHHHHhCChhhCCCH
Confidence 999999764322222222211111 00111111000 000224568899999999999999999
Q ss_pred HHHHHHHHHHHHhhhccc
Q 002897 848 RDVVVKLCAAREAFVSMQ 865 (869)
Q Consensus 848 ~evl~~L~~~~~~~~~~~ 865 (869)
+|+++.|+++.+......
T Consensus 325 ~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 325 AMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp HHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHhcCCCc
Confidence 999999999988876543
No 194
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.7e-39 Score=343.19 Aligned_cols=260 Identities=21% Similarity=0.362 Sum_probs=208.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc------
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF------ 625 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 625 (869)
...+|++.+.||+|+||.||+|++..+|+.||+|+++... +.+.+|++++++++||||+++++++...++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3467999999999999999999998899999999996543 346789999999999999999998754221
Q ss_pred -----CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 002897 626 -----NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH 700 (869)
Q Consensus 626 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 700 (869)
......++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 123568999999999999999976532 2489999999999999999999999 9999999999999999
Q ss_pred CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 701 DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 701 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
++.+||+|||.+....... ......|++.|+|||++.+..++.++||||||+++|+|++|..|+...
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---- 224 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET---- 224 (284)
T ss_dssp TTEEEECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----
T ss_pred CCCEEECcchhheeccccc---------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----
Confidence 9999999999998765432 123346899999999999889999999999999999999999986421
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
............. ..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 225 ---~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 225 ---SKFFTDLRDGIIS--------------------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp ---HHHHHHHHTTCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ---HHHHHHhhccccc--------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 1111111000000 01234577999999999999999999999999998776
Q ss_pred hhcc
Q 002897 861 FVSM 864 (869)
Q Consensus 861 ~~~~ 864 (869)
....
T Consensus 276 ~~~~ 279 (284)
T 2a19_B 276 PEKN 279 (284)
T ss_dssp ----
T ss_pred CCcc
Confidence 5443
No 195
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.7e-40 Score=353.21 Aligned_cols=277 Identities=22% Similarity=0.323 Sum_probs=217.1
Q ss_pred HHHHHHHhcCCCCCCeeeeecceEEEEEEE-----CCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhC-CCCccceEEE
Q 002897 546 YAKLSKATSEFSSSNMVGQGSFGTVFKGII-----GENGMLVAVKVLNLMQ-KGALKSFLTECEALRSI-RHRNLIKIIT 618 (869)
Q Consensus 546 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~ 618 (869)
..+.....++|++.+.||+|+||+||+|++ ..+++.||||+++... ....+.+.+|+.+++++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344445568999999999999999999985 3577999999997543 33456789999999999 7999999999
Q ss_pred EeeccccCCCceEEEEeecccCCCHHHHHhhCCCccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 002897 619 ICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLE----------VCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVH 688 (869)
Q Consensus 619 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 688 (869)
++... ....++||||+++|+|.+++........ ...+++..++.++.|+++||+|||+. +|+|
T Consensus 99 ~~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H 171 (316)
T 2xir_A 99 ACTKP----GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 171 (316)
T ss_dssp EECCT----TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEecC----CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 97643 3568999999999999999987653210 11278999999999999999999999 9999
Q ss_pred cCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc
Q 002897 689 GDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS 768 (869)
Q Consensus 689 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t 768 (869)
|||||+||+++.++.+||+|||.++........ .......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 172 ~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t 245 (316)
T 2xir_A 172 RDLAARNILLSEKNVVKICDFGLARDIYKDPDY------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245 (316)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTS------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred ccCccceEEECCCCCEEECCCccccccccCccc------eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHh
Confidence 999999999999999999999999866543211 12234557889999999988899999999999999999998
Q ss_pred -CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH
Q 002897 769 -RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM 847 (869)
Q Consensus 769 -g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 847 (869)
|+.||................. ... .+..++..+.+++.+||+.||++|||+
T Consensus 246 ~g~~p~~~~~~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 298 (316)
T 2xir_A 246 LGASPYPGVKIDEEFCRRLKEGT-RMR--------------------------APDYTTPEMYQTMLDCWHGEPSQRPTF 298 (316)
T ss_dssp TSCCSSTTCCCSHHHHHHHHHTC-CCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCCCCCcccchhHHHHHHhccCc-cCC--------------------------CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9999975432211111111100 000 001233567899999999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 002897 848 RDVVVKLCAAREAFV 862 (869)
Q Consensus 848 ~evl~~L~~~~~~~~ 862 (869)
.|+++.|+.+.++..
T Consensus 299 ~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 299 SELVEHLGNLLQANA 313 (316)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999987653
No 196
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.2e-39 Score=358.79 Aligned_cols=350 Identities=18% Similarity=0.206 Sum_probs=297.6
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCc
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRN 80 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n 80 (869)
+||+++|+++ .+| .+ ..+++|++|+|++|+|+++ | ++.+++|++|+|++|+|++. | |+++++|++|+|++|
T Consensus 46 ~L~Ls~n~l~-~~~-~l-~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N 116 (457)
T 3bz5_A 46 SLDCHNSSIT-DMT-GI-EKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTN 116 (457)
T ss_dssp EEECCSSCCC-CCT-TG-GGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSS
T ss_pred EEEccCCCcc-cCh-hh-cccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCC
Confidence 3799999999 688 44 5899999999999999964 4 99999999999999999964 4 999999999999999
Q ss_pred ccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 81 QFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 81 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
++++. | +.++++|++|++++|+++ .++ +..+++|++|++++|...+.+ .+..+++|++|++++|+++++.
T Consensus 117 ~l~~l-~--~~~l~~L~~L~l~~N~l~-~l~---l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~- 186 (457)
T 3bz5_A 117 KLTKL-D--VSQNPLLTYLNCARNTLT-EID---VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD- 186 (457)
T ss_dssp CCSCC-C--CTTCTTCCEEECTTSCCS-CCC---CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC-
T ss_pred cCCee-c--CCCCCcCCEEECCCCccc-eec---cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceec-
Confidence 99964 4 899999999999999998 465 789999999999999655444 5889999999999999998853
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
+..+++|+.|++++|.++.++ +..+++|++|++++|++++ +| +..+++ |+.|++++|.+++..
T Consensus 187 --l~~l~~L~~L~l~~N~l~~~~---------l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~-L~~L~l~~N~l~~~~-- 249 (457)
T 3bz5_A 187 --VSQNKLLNRLNCDTNNITKLD---------LNQNIQLTFLDCSSNKLTE-ID--VTPLTQ-LTYFDCSVNPLTELD-- 249 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCCC---------CTTCTTCSEEECCSSCCSC-CC--CTTCTT-CSEEECCSSCCSCCC--
T ss_pred --cccCCCCCEEECcCCcCCeec---------cccCCCCCEEECcCCcccc-cC--ccccCC-CCEEEeeCCcCCCcC--
Confidence 889999999999999998763 6789999999999999997 45 677765 999999999999753
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSL 320 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 320 (869)
+..+++|+.|++++| +|+.|++++|.+.+.+| ++.+++|+.|++++|+..+.+|. ..++|
T Consensus 250 -~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L 309 (457)
T 3bz5_A 250 -VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGI 309 (457)
T ss_dssp -CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCC
T ss_pred -HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcc
Confidence 566788888888775 46678889998777766 57889999999999988777764 45677
Q ss_pred ceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeC
Q 002897 321 IMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQD 400 (869)
Q Consensus 321 ~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 400 (869)
+.|++++|. .++.|++++|++++. + ++++++|+.|++++|++++ ++.|..|++++
T Consensus 310 ~~L~l~~~~--------------~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~ 364 (457)
T 3bz5_A 310 TELDLSQNP--------------KLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALN 364 (457)
T ss_dssp SCCCCTTCT--------------TCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGG
T ss_pred eEechhhcc--------------cCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccC
Confidence 888887772 356799999999974 3 8999999999999999985 35677788999
Q ss_pred ccccCCCCccccccccccEEEccCCcccCCCccccc
Q 002897 401 NSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLE 436 (869)
Q Consensus 401 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 436 (869)
|.+.|. +.+..|..+++++|+++|.+|..+.
T Consensus 365 n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 365 NNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp TSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred CcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 999865 4667888999999999999997654
No 197
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=9.8e-40 Score=352.55 Aligned_cols=254 Identities=23% Similarity=0.294 Sum_probs=200.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..++|++.+.||+|+||.||+|.+..+|+.||||+++.... ...+|++++.++ +||||+++++++.+ ...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~-----~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDD-----GKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEEC-----SSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEc-----CCE
Confidence 35679999999999999999999999999999999965432 235688888888 79999999999754 378
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC----CcEEE
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD----MVAHV 706 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl 706 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ ||+||||||+||++..+ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 999999999999999998754 389999999999999999999999 99999999999998543 35999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.
T Consensus 162 ~Dfg~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~ 231 (342)
T 2qr7_A 162 CDFGFAKQLRAEN--------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEI 231 (342)
T ss_dssp CCCTTCEECBCTT--------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHH
T ss_pred EECCCcccCcCCC--------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHH
Confidence 9999998764432 1223456899999999998878899999999999999999999999753221 22222
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......... . . .......+..+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~i~~~~~~-~-~------------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 232 LARIGSGKFS-L-S------------------GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHHCCCC-C-C------------------STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHccCCcc-c-C------------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 2211111100 0 0 00011234567899999999999999999999873
No 198
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.5e-39 Score=345.23 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|.+.+.||+|+||.||+|++..+|+.||+|+++.......+.+.+|+.++++++||||+++++++... ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 82 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST-----THYY 82 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS-----SEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC-----CEEE
Confidence 46799999999999999999999989999999999765544556789999999999999999999997643 7789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGDF 709 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 709 (869)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 83 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 83 LVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccC
Confidence 9999999999999987654 389999999999999999999999 99999999999999 78889999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+...... ......|++.|+|||++.+..++.++||||+||++|+|++|+.||...... .....
T Consensus 154 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~ 218 (304)
T 2jam_A 154 GLSKMEQNG----------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFEK 218 (304)
T ss_dssp STTCCCCCB----------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH
T ss_pred CcceecCCC----------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH
Confidence 998754321 122345899999999999999999999999999999999999999753211 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... .. . .......+..+.+++.+||+.||++|||++|+++
T Consensus 219 i~~~~~-~~-~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 219 IKEGYY-EF-E------------------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHCCC-CC-C------------------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHcCCC-CC-C------------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 100000 00 0 0011123456889999999999999999999987
No 199
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.3e-39 Score=360.67 Aligned_cols=273 Identities=21% Similarity=0.247 Sum_probs=210.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++|++.+..+.++.. .....+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~----~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV----EGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE----ETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe----eCCEEE
Confidence 4689999999999999999999988999999998864433 2457899999999987554444444332 236789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHVGDF 709 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Df 709 (869)
+||||+ +++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 80 lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999999 9999999986543 399999999999999999999999 99999999999999 68899999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+++.+.......... ........||..|+|||++.+..++.++|||||||++|||++|+.||........ ......
T Consensus 151 Gla~~~~~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~ 227 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIP-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEK 227 (483)
T ss_dssp TTCEECBCTTTCCBCC-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHH
T ss_pred CcceeccCCccccccc-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHH
Confidence 9998776543221110 1223456799999999999999999999999999999999999999976433211 111111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
.......... ......++.++.+++..||+.||++||++.+|++.|+.+.....
T Consensus 228 i~~~~~~~~~-------------------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~ 281 (483)
T 3sv0_A 228 ISEKKVATSI-------------------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREG 281 (483)
T ss_dssp HHHHHHHSCH-------------------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhhccccccH-------------------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcC
Confidence 1000000000 00111345678999999999999999999999999999877553
No 200
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=352.49 Aligned_cols=252 Identities=22% Similarity=0.378 Sum_probs=193.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCC--CccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRH--RNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.++++++| |||+++++++...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~----- 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----- 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC-----
Confidence 457999999999999999999985 7999999998643 33445778999999999976 9999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||| +.+|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|
T Consensus 82 ~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp SEEEEEEC-CCSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECC
T ss_pred CEEEEEEe-CCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEee
Confidence 78999999 56889999998764 389999999999999999999999 999999999999997 67899999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----------CCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----------SEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
||+|+....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 151 FG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 224 (343)
T 3dbq_A 151 FGIANQMQPDTT------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224 (343)
T ss_dssp CSSSCCC------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccCcccc------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence 999987654321 112234579999999998754 678999999999999999999999997532
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. .........+..... . +...+..+.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~---~~~~~~~~~~~~~~~-~----------------------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 225 NQ---ISKLHAIIDPNHEIE-F----------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SH---HHHHHHHHCTTSCCC-C----------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hH---HHHHHHHhcCCcccC-C----------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 21 111111110000000 0 00112457799999999999999999999874
No 201
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.8e-39 Score=350.11 Aligned_cols=267 Identities=25% Similarity=0.386 Sum_probs=209.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEE--EEEEeecc-cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLV--AVKVLNLM-QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 629 (869)
++|++.+.||+|+||.||+|++..++..+ |+|.++.. .....+.+.+|+++++++ +||||+++++++... +
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-----~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----G 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET-----T
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC-----C
Confidence 67999999999999999999998888865 99988643 233456789999999999 899999999997654 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCc----------ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDK----------LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 699 (869)
..++||||+++|+|.+++...... .....+++.+++.++.|+++||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 789999999999999999875410 0123589999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCcc
Q 002897 700 HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFH 778 (869)
Q Consensus 700 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~ 778 (869)
.++.+||+|||+++..... .......+++.|+|||++.+..++.++|||||||++|+|++ |+.||.....
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~ 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEE---------CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred CCCeEEEcccCcCcccccc---------ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH
Confidence 9999999999999743221 11223456889999999988889999999999999999998 9999965321
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAR 858 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~ 858 (869)
........... . ...+..++..+.+++.+||+.||++|||++|+++.|.++.
T Consensus 248 -----~~~~~~~~~~~-----~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 248 -----AELYEKLPQGY-----R------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp -----HHHHHHGGGTC-----C------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHHhhcCC-----C------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111100 0 0001123456889999999999999999999999999998
Q ss_pred Hhhhccc
Q 002897 859 EAFVSMQ 865 (869)
Q Consensus 859 ~~~~~~~ 865 (869)
+......
T Consensus 300 ~~~~~~~ 306 (327)
T 1fvr_A 300 EERKTYV 306 (327)
T ss_dssp HSSSCSB
T ss_pred HhhcCcc
Confidence 8765443
No 202
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.9e-39 Score=344.40 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=205.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++... +
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-----D 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC-----C
Confidence 46899999999999999999999999999999998644 234457788999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++.... .+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 7899999999999999987654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+....... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... +....
T Consensus 160 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~ 226 (294)
T 2rku_A 160 GLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLR 226 (294)
T ss_dssp TTCEECCSTT--------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH
T ss_pred cCceecccCc--------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 9998764332 1223456899999999999988999999999999999999999999753211 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... ..+...+..+.+++.+||+.||++|||++|+++.
T Consensus 227 ~~~~~~------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 227 IKKNEY------------------------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHTTCC------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HhhccC------------------------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 100000 0001223467899999999999999999999874
No 203
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.2e-40 Score=354.46 Aligned_cols=273 Identities=21% Similarity=0.384 Sum_probs=213.4
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEEC-----CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEe
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIG-----ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITIC 620 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 620 (869)
++.....++|++.+.||+|+||.||+|++. .+++.||||++.... ......+.+|+.+++.++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344556788999999999999999999875 357899999996443 23446789999999999999999999997
Q ss_pred eccccCCCceEEEEeecccCCCHHHHHhhCCCcc----cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 002897 621 SSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKL----EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNV 696 (869)
Q Consensus 621 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 696 (869)
.. ....++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 98 ~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NI 169 (322)
T 1p4o_A 98 SQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC 169 (322)
T ss_dssp CS-----SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGE
T ss_pred cc-----CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceE
Confidence 54 367899999999999999997643110 012478999999999999999999999 999999999999
Q ss_pred eecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCc
Q 002897 697 LLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDS 775 (869)
Q Consensus 697 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~ 775 (869)
+++.++.+||+|||.++....... ........||+.|+|||++.+..++.++|||||||++|+|++ |+.||..
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDY------YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGC------EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred EEcCCCeEEECcCccccccccccc------cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 999999999999999976543211 011223457889999999988889999999999999999999 8999865
Q ss_pred CccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 776 MFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
... .............. .+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 244 ~~~-----~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 244 LSN-----EQVLRFVMEGGLLD-----------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp SCH-----HHHHHHHHTTCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred CCH-----HHHHHHHHcCCcCC-----------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 321 11111111111000 01123456889999999999999999999999998
Q ss_pred HHHHhh
Q 002897 856 AAREAF 861 (869)
Q Consensus 856 ~~~~~~ 861 (869)
++.+..
T Consensus 296 ~~~~~~ 301 (322)
T 1p4o_A 296 EEMEPG 301 (322)
T ss_dssp GGSCTT
T ss_pred HhhccC
Confidence 875543
No 204
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.5e-39 Score=348.49 Aligned_cols=282 Identities=23% Similarity=0.346 Sum_probs=206.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeecccc---CC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDF---NG 627 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 627 (869)
.++|++.++||+|+||+||+|++..+|+.||||++.... ......+.+|+++++.++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999999899999999985433 2334678899999999999999999999876421 11
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
....++||||+++ ++.+.+..... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 3578999999975 88888776543 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
|||.|+.+...... .........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....
T Consensus 167 Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i 241 (351)
T 3mi9_A 167 DFGLARAFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALI 241 (351)
T ss_dssp CCTTCEECCCCSSS----SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred cchhcccccccccc----cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHH
Confidence 99999876543221 1123345678999999998876 457999999999999999999999997633221 11111
Q ss_pred hhh---hcccccccccCccchhhhhhcccccCCCccchHHH-----HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 787 SKM---VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEE-----CLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 787 ~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ..+................ ............ ..+.+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEKLE----LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTSSC----CCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCChhhccccccchhhcccc----cccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111 1111111110000000000 000000111111 1356889999999999999999999987
No 205
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.3e-39 Score=340.95 Aligned_cols=259 Identities=25% Similarity=0.435 Sum_probs=208.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+. +++.||+|++..... ..+.+.+|++++++++||||+++++++.. +..+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 83 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ------EPIY 83 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC------CCcE
Confidence 467899999999999999999986 778999999865432 35778999999999999999999998653 4578
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 84 ~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 156 (279)
T 1qpc_A 84 IITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLA 156 (279)
T ss_dssp EEEECCTTCBHHHHTTSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccc
Confidence 99999999999999975421 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .......
T Consensus 157 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~~ 224 (279)
T 1qpc_A 157 RLIEDNEY-------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNLE 224 (279)
T ss_dssp EECSSSCE-------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHH
T ss_pred ccccCccc-------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHHHh
Confidence 87654321 11233456889999999988889999999999999999999 99998653211 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
... . ...+..++..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 225 ~~~-~----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 225 RGY-R----------------------MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp TTC-C----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ccc-C----------------------CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0 0001123456889999999999999999999999999987764
No 206
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=6.3e-39 Score=350.30 Aligned_cols=258 Identities=23% Similarity=0.374 Sum_probs=205.7
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhC-CCCccceEE
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSI-RHRNLIKII 617 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~~~ 617 (869)
.......++|++.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344556678999999999999999999998899999999986433 12245678999999999 799999999
Q ss_pred EEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 002897 618 TICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVL 697 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 697 (869)
+++... ...++||||+++++|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+
T Consensus 167 ~~~~~~-----~~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl 232 (365)
T 2y7j_A 167 DSYESS-----SFMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENIL 232 (365)
T ss_dssp EEEEBS-----SEEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred EEEeeC-----CEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence 997643 78999999999999999998643 389999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC------CCCCCccccchhhhHHHHHHHcCCC
Q 002897 698 LDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT------GSEASMTGDVYSFGILLLEMFSRRR 771 (869)
Q Consensus 698 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~el~tg~~ 771 (869)
++.++.+||+|||++..+.... ......||+.|+|||++. ...++.++|||||||++|+|++|+.
T Consensus 233 ~~~~~~ikl~DfG~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 233 LDDNMQIRLSDFGFSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp ECTTCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred ECCCCCEEEEecCcccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 9999999999999998765432 223457999999999875 3358899999999999999999999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||..... ............ .. ..+.....+..+.+++.+||+.||++|||++|++
T Consensus 304 pf~~~~~-----~~~~~~i~~~~~-~~-------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell 358 (365)
T 2y7j_A 304 PFWHRRQ-----ILMLRMIMEGQY-QF-------------------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358 (365)
T ss_dssp SSCCSSH-----HHHHHHHHHTCC-CC-------------------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred CCCCCCH-----HHHHHHHHhCCC-CC-------------------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHh
Confidence 9964211 111111100000 00 0001112345688999999999999999999998
Q ss_pred H
Q 002897 852 V 852 (869)
Q Consensus 852 ~ 852 (869)
+
T Consensus 359 ~ 359 (365)
T 2y7j_A 359 Q 359 (365)
T ss_dssp H
T ss_pred c
Confidence 6
No 207
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=339.72 Aligned_cols=253 Identities=22% Similarity=0.332 Sum_probs=199.2
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIV 634 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 634 (869)
+|....+||+|+||.||+|.+..+++.||||++........+.+.+|+.+++.++||||+++++++... +..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN-----GFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC-----CcEEEE
Confidence 455556999999999999999989999999999876666678899999999999999999999997653 678999
Q ss_pred eecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEccccccc
Q 002897 635 YDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-DMVAHVGDFGLAK 713 (869)
Q Consensus 635 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~a~ 713 (869)
|||+++++|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||.+.
T Consensus 98 ~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGP---LKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTCC---CTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhccC---CCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999999999875431 2367899999999999999999999 9999999999999987 8999999999998
Q ss_pred cCCCCCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 714 FLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
...... .......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.................
T Consensus 172 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~- 242 (295)
T 2clq_A 172 RLAGIN--------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK- 242 (295)
T ss_dssp ESCC-------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-
T ss_pred ccCCCC--------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-
Confidence 764422 1223456899999999987643 78999999999999999999999964321111110000000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..+. .+..++..+.+++.+||+.||++|||++|+++
T Consensus 243 -------~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 243 -------VHPE------------------IPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -------CCCC------------------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -------cccc------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 01123456789999999999999999999975
No 208
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.9e-39 Score=342.84 Aligned_cols=251 Identities=23% Similarity=0.347 Sum_probs=206.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.+.|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 95 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKL 95 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeE
Confidence 357899999999999999999999899999999997543 34567899999999999999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++++|.+++... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 96 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 96 WIIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp EEEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 9999999999999999753 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .......
T Consensus 166 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~ 232 (303)
T 3a7i_A 166 AGQLTDTQ--------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-----KVLFLIP 232 (303)
T ss_dssp CEECBTTB--------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHH
T ss_pred ceecCccc--------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH-----HHHHHhh
Confidence 98765432 1223456899999999999999999999999999999999999998753211 1111100
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKL 854 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 854 (869)
... .+.. ...++..+.+++.+||+.||++|||+.|+++..
T Consensus 233 ~~~-----~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 233 KNN-----PPTL------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp HSC-----CCCC------------------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred cCC-----CCCC------------------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 000 0000 012234678999999999999999999998753
No 209
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.2e-39 Score=348.92 Aligned_cols=269 Identities=17% Similarity=0.228 Sum_probs=209.3
Q ss_pred ccCCCcccHHHHHHHhcCCCCC-CeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhC-CCCcc
Q 002897 538 EQQFPMISYAKLSKATSEFSSS-NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSI-RHRNL 613 (869)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~ni 613 (869)
....+.+.+.......++|.+. +.||+|+||+||+|.+..+|+.||+|++.... ......+.+|+.+++.+ .||||
T Consensus 12 ~~~~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i 91 (327)
T 3lm5_A 12 DLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91 (327)
T ss_dssp ----CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTB
T ss_pred cccchhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCE
Confidence 3445566666777778889888 89999999999999999999999999996433 33457889999999999 57999
Q ss_pred ceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 614 IKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 614 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
+++++++.. ....++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||
T Consensus 92 v~~~~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp 159 (327)
T 3lm5_A 92 INLHEVYEN-----TSEIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKP 159 (327)
T ss_dssp CCEEEEEEC-----SSEEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred EEEEEEEEe-----CCeEEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCh
Confidence 999999764 3778999999999999999865432 2489999999999999999999999 999999999
Q ss_pred CceeecC---CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCC
Q 002897 694 SNVLLDH---DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRR 770 (869)
Q Consensus 694 ~NIll~~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~ 770 (869)
+||+++. ++.+||+|||.++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus 160 ~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~ 230 (327)
T 3lm5_A 160 QNILLSSIYPLGDIKIVDFGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHT 230 (327)
T ss_dssp GGEEESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred HHEEEecCCCCCcEEEeeCccccccCCcc---------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCC
Confidence 9999988 7899999999998765432 223356899999999999999999999999999999999999
Q ss_pred CCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 002897 771 RPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDV 850 (869)
Q Consensus 771 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 850 (869)
.||....... .......... .. .......++..+.+++.+||+.||++|||++|+
T Consensus 231 ~pf~~~~~~~-~~~~i~~~~~--~~----------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l 285 (327)
T 3lm5_A 231 SPFVGEDNQE-TYLNISQVNV--DY----------------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEIC 285 (327)
T ss_dssp CSSCCSSHHH-HHHHHHHTCC--CC----------------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCCCCchH-HHHHHHhccc--cc----------------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 9997532211 1111111000 00 000111334568899999999999999999999
Q ss_pred HH
Q 002897 851 VV 852 (869)
Q Consensus 851 l~ 852 (869)
++
T Consensus 286 l~ 287 (327)
T 3lm5_A 286 LS 287 (327)
T ss_dssp TT
T ss_pred hC
Confidence 76
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-39 Score=342.90 Aligned_cols=255 Identities=29% Similarity=0.380 Sum_probs=200.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|.+ +|+.||||+++... ..+.+.+|++++++++||||+++++++... ....+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC----CCceE
Confidence 46899999999999999999998 58999999986433 457789999999999999999999986542 35689
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 99999999999999976432 1378999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
....... ....+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .......
T Consensus 165 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~ 228 (278)
T 1byg_A 165 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVE 228 (278)
T ss_dssp ----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHT
T ss_pred ccccccc-----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHh
Confidence 7543321 22357889999999988889999999999999999998 99999753221 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
... . ...+..++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 229 ~~~-----~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 229 KGY-----K------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp TTC-----C------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCC-----C------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 000 0 0011133456889999999999999999999999999987653
No 211
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.8e-40 Score=355.11 Aligned_cols=277 Identities=23% Similarity=0.337 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK-----KR 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----TE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-----CE
Confidence 367999999999999999999999899999999986433 23346678999999999999999999997653 77
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 899999999999998876544 389999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
.+....... .......|++.|+|||++.+. .++.++||||+||++|+|++|+.||........ .......
T Consensus 170 ~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~ 240 (331)
T 4aaa_A 170 FARTLAAPG--------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMC 240 (331)
T ss_dssp TC--------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHH
T ss_pred CceeecCCc--------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHH
Confidence 997654432 222345689999999998875 689999999999999999999999975432211 1111100
Q ss_pred hcc--cccccccCc-cchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLP--EKVMEIVDP-SLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~--~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ......... .....................+.++..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 000000000 000000000000000001111234577899999999999999999999987
No 212
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.3e-39 Score=364.36 Aligned_cols=257 Identities=24% Similarity=0.361 Sum_probs=206.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|.+.++||+|+||.||+|++..+|+.||+|++.... ......+.+|++++++++||||+++++++.. ..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~-----~~ 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET-----KT 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----SS
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee-----CC
Confidence 367899999999999999999999899999999996432 2335678899999999999999999998754 37
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeccCCCHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 799999999999999999765421 22489999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...
T Consensus 334 Gla~~~~~~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~ 404 (543)
T 3c4z_A 334 GLAVELKAGQ--------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQR 404 (543)
T ss_dssp TTCEECCTTC--------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHH
T ss_pred ceeeeccCCC--------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHH
Confidence 9998765432 1223457999999999999999999999999999999999999999764321 111222221
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM-----RDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 852 (869)
...... ..+...+..+.+++.+||+.||++||++ +|+++
T Consensus 405 i~~~~~------------------------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 405 VLEQAV------------------------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHCCC------------------------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred Hhhccc------------------------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 111100 0001234567899999999999999975 56653
No 213
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.8e-39 Score=341.22 Aligned_cols=247 Identities=22% Similarity=0.350 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. .
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR-----K 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC-----C
Confidence 467999999999999999999999899999999996432 22346789999999999999999999997643 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++|+|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 8899999999999999998754 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+...... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....
T Consensus 159 g~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~ 223 (284)
T 2vgo_A 159 GWSVHAPSL----------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHRR 223 (284)
T ss_dssp TTCEECSSS----------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH
T ss_pred cccccCccc----------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHHH
Confidence 998765432 123356899999999999999999999999999999999999999753211 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... . .+...+..+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~------~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 224 IVNVDL------K------------------FPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHTTCC------C------------------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Hhcccc------C------------------CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 110000 0 00123356789999999999999999999987
No 214
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.7e-39 Score=354.94 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=194.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCC--CCccceEEEEeeccccCCCc
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIR--HRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 629 (869)
.+|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.++++++ ||||+++++++... +
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-----~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-----Q 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----S
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-----C
Confidence 46999999999999999999987 5999999999643 3345678899999999996 59999999997653 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 7999999 56889999998765 389999999999999999999999 999999999999995 589999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----------CCCCccccchhhhHHHHHHHcCCCCCCcCcc
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----------SEASMTGDVYSFGILLLEMFSRRRPTDSMFH 778 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~el~tg~~pf~~~~~ 778 (869)
|+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 199 G~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~ 272 (390)
T 2zmd_A 199 GIANQMQPDTT------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272 (390)
T ss_dssp SSSCCC---------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred CccccccCCCc------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH
Confidence 99987654321 012234579999999998764 3689999999999999999999999975322
Q ss_pred CCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 779 EGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......... ........ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 273 ~~~~~~~~~~----~~~~~~~~----------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 273 QISKLHAIID----PNHEIEFP----------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHHHHHHC----TTSCCCCC----------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhC----ccccCCCC----------------------ccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111111 00000000 0113457899999999999999999999864
No 215
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=375.14 Aligned_cols=259 Identities=24% Similarity=0.362 Sum_probs=204.1
Q ss_pred eeeeecceEEEEEEEC--CCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEeec
Q 002897 561 MVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
.||+|+||.||+|.+. .++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence 7999999999999875 356789999997543 3456789999999999999999999999753 458999999
Q ss_pred ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCC
Q 002897 638 MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPA 717 (869)
Q Consensus 638 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 717 (869)
+++|+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 417 ~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 417 AGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp CTTCBHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred CCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999976543 389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccccc
Q 002897 718 RPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEKVM 796 (869)
Q Consensus 718 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 796 (869)
..... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... ........ ..
T Consensus 489 ~~~~~-----~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~---~~-- 556 (613)
T 2ozo_A 489 DDSYY-----TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQ---GK-- 556 (613)
T ss_dssp ------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHT---TC--
T ss_pred CCcee-----eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHc---CC--
Confidence 32110 11122345789999999998899999999999999999998 99999753221 11111110 00
Q ss_pred cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhhcccC
Q 002897 797 EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFVSMQD 866 (869)
Q Consensus 797 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 866 (869)
....+..++..+.+++.+||+.||++|||+.||++.|+.+........+
T Consensus 557 ---------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~ 605 (613)
T 2ozo_A 557 ---------------------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 605 (613)
T ss_dssp ---------------------CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCC
T ss_pred ---------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccC
Confidence 0011123556788999999999999999999999999998877655433
No 216
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2e-39 Score=350.48 Aligned_cols=250 Identities=21% Similarity=0.300 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+. +
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN-----D 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----C
Confidence 46899999999999999999999999999999998643 234457789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++.... .+++.+++.++.|+++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 8899999999999999987654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|.+....... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||...... .....
T Consensus 186 g~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~ 252 (335)
T 2owb_A 186 GLATKVEYDG--------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYLR 252 (335)
T ss_dssp TTCEECCSTT--------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH
T ss_pred cCceecccCc--------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH-----HHHHH
Confidence 9998765332 1223456899999999999888999999999999999999999999753211 11111
Q ss_pred hcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... . .+..++..+.+++.+||+.||++|||++|+++.
T Consensus 253 ~~~~~~------~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 253 IKKNEY------S------------------IPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHTCC------C------------------CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HhcCCC------C------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 100000 0 001223457799999999999999999999873
No 217
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=8.2e-40 Score=356.81 Aligned_cols=277 Identities=19% Similarity=0.265 Sum_probs=188.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeecc-ccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSI-DFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|.+..+|+.||||++... .....+++.+|+++++.++||||+++++++... ......
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999999999999999998643 234457788999999999999999999997653 123345
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++|+||+ +++|.+++... .+++..+..++.||++||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 689999999 68999998763 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .......+
T Consensus 177 G~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~ 244 (367)
T 2fst_X 177 GLARHTADE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILR 244 (367)
T ss_dssp -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred ccccccccc-----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 999764322 233568999999999877 67899999999999999999999999753221 11111111
Q ss_pred hhccc--ccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLPE--KVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~~--~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... .....+.......+... ...............+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 11000 00000000000000000 000000000011123467889999999999999999999986
No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=347.34 Aligned_cols=273 Identities=18% Similarity=0.206 Sum_probs=196.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccc---cCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSID---FNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~---~~~~ 628 (869)
..+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ..+.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999999999999999999997666666778899999999995 999999999985322 1345
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEE
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP--VVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl 706 (869)
...++||||++ |+|.+++..... ..++++.+++.++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMES---RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHT---TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ceEEEEEEecC-CCHHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 66899999995 699999875321 12489999999999999999999999 8 999999999999999999999
Q ss_pred ccccccccCCCCCCCCccc----cCCCCCCccCcccccCCccc---CCCCCCccccchhhhHHHHHHHcCCCCCCcCccC
Q 002897 707 GDFGLAKFLPARPLDTVVE----TPSSSSGIKGTVGYIAPEYG---TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHE 779 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~ 779 (869)
+|||.++............ .........||+.|+|||++ .+..++.++|||||||++|+|++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765433211000 00112245689999999998 5667899999999999999999999999642211
Q ss_pred CchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Q 002897 780 GLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAARE 859 (869)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~ 859 (869)
. .......... ....+..+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 260 ~-----~~~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 R-----IVNGKYSIPP--------------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -----------CCCCT--------------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-----hhcCcccCCc--------------------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 0000000000 00112236789999999999999999999999999987
Q ss_pred hhhc
Q 002897 860 AFVS 863 (869)
Q Consensus 860 ~~~~ 863 (869)
....
T Consensus 309 ~~~~ 312 (337)
T 3ll6_A 309 ARNV 312 (337)
T ss_dssp HTTC
T ss_pred ccCC
Confidence 6543
No 219
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2e-39 Score=350.41 Aligned_cols=272 Identities=20% Similarity=0.268 Sum_probs=204.2
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
++|++.++||+|+||+||+|++..+++.||||+++... .+.+.+|++++++++ ||||+++++++... .....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCceE
Confidence 67999999999999999999999999999999986433 467899999999997 99999999998652 246789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-VAHVGDFGL 711 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfg~ 711 (869)
+||||+++++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||.
T Consensus 110 lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT---------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp EEEECCCCCCHHHHGGG---------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeccCchhHHHHHHh---------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 99999999999999853 78899999999999999999999 999999999999999777 899999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
|+...... ......|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.................
T Consensus 178 a~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~ 248 (330)
T 3nsz_A 178 AEFYHPGQ---------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248 (330)
T ss_dssp CEECCTTC---------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred ceEcCCCC---------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence 98765432 2234568999999999877 6689999999999999999999999964332222222211111
Q ss_pred ccccccc-------ccCccchhhhhhc--ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVME-------IVDPSLLLEVRAN--NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~-------~~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......+ ..++......... ...............+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1100000 0111110000000 000000011112234567899999999999999999999986
No 220
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.8e-39 Score=350.01 Aligned_cols=279 Identities=18% Similarity=0.203 Sum_probs=199.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 629 (869)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 36899999999999999999999999999999999643 3344567889999999999999999999986542 23345
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++ +|.+++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 78999999975 78888853 288999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
|+|+..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... ........
T Consensus 172 g~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 241 (371)
T 2xrw_A 172 GLARTAGTS---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQ 241 (371)
T ss_dssp CC-------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-
T ss_pred ecccccccc---------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 999865432 12234568999999999999999999999999999999999999997532211 11111110
Q ss_pred hccc--ccccccCccchhhhhhcc------------cccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 790 VLPE--KVMEIVDPSLLLEVRANN------------SMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 790 ~~~~--~~~~~~d~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... .......+.......... ..............+..+.+++.+||+.||++|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 000000000000000000 000001112233456789999999999999999999999873
No 221
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.3e-39 Score=374.78 Aligned_cols=255 Identities=27% Similarity=0.368 Sum_probs=201.8
Q ss_pred CeeeeecceEEEEEEE--CCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEEEEe
Q 002897 560 NMVGQGSFGTVFKGII--GENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
+.||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999955 4567899999997533 3345789999999999999999999999753 4578999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999998654 389999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhcccc
Q 002897 716 PARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVLPEK 794 (869)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~ 794 (869)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... +.........
T Consensus 520 ~~~~~~~-----~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~ 589 (635)
T 4fl3_A 520 RADENYY-----KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGE 589 (635)
T ss_dssp TC------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTC
T ss_pred ccCcccc-----ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCC
Confidence 5443111 12233456789999999998899999999999999999998 99999753221 1111111000
Q ss_pred cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhh
Q 002897 795 VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAFV 862 (869)
Q Consensus 795 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 862 (869)
....+..++.++.+++..||+.||++|||+++|++.|+.+.....
T Consensus 590 -----------------------~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~ 634 (635)
T 4fl3_A 590 -----------------------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634 (635)
T ss_dssp -----------------------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred -----------------------CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence 000111345678899999999999999999999999999876653
No 222
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.6e-39 Score=348.76 Aligned_cols=268 Identities=25% Similarity=0.374 Sum_probs=205.7
Q ss_pred hcCCCCCCeeeeecceEEEEEE-----ECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGI-----IGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||.||+|+ ...+++.||||++... .......+.+|+.++++++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC---
Confidence 4689999999999999999999 4457889999999643 334456789999999999999999999997643
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcc-cccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---C
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKL-EVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---M 702 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~ 702 (869)
...++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ .
T Consensus 106 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 106 --LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp --SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred --CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 66799999999999999998765321 123489999999999999999999999 99999999999999844 4
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~ 781 (869)
.+||+|||.+........ ........|++.|+|||++.+..++.++|||||||++|+|++ |+.||.....
T Consensus 181 ~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 251 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY------YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--- 251 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH---
T ss_pred eEEECccccccccccccc------cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH---
Confidence 699999999976543221 012233567899999999988899999999999999999998 9999865321
Q ss_pred hHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 782 TLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
............. ..+..++..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 252 --~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 252 --QEVLEFVTSGGRM-----------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp --HHHHHHHHTTCCC-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred --HHHHHHHhcCCCC-----------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1111111110000 001123456889999999999999999999999999887654
Q ss_pred h
Q 002897 862 V 862 (869)
Q Consensus 862 ~ 862 (869)
.
T Consensus 307 ~ 307 (327)
T 2yfx_A 307 D 307 (327)
T ss_dssp H
T ss_pred H
Confidence 3
No 223
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-39 Score=343.15 Aligned_cols=259 Identities=21% Similarity=0.289 Sum_probs=205.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|++..+|+.||+|++... .....+.+.+|++++++++||||+++++++... ....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR---TNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG---GGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC---CCce
Confidence 46899999999999999999999999999999999743 234457789999999999999999999987532 2367
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCceeecCCCcEE
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPP-----VVHGDLKPSNVLLDHDMVAH 705 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~k 705 (869)
.++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhccc--CCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 89999999999999999764321 22489999999999999999999999 7 99999999999999999999
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||.+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ..
T Consensus 157 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~ 223 (279)
T 2w5a_A 157 LGDFGLARILNHDT--------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KE 223 (279)
T ss_dssp ECCCCHHHHC---C--------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HH
T ss_pred EecCchheeecccc--------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----HH
Confidence 99999998764321 111234689999999999988999999999999999999999999975321 11
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLC 855 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 855 (869)
............ .+..++..+.+++.+||+.||++|||+.|+++.+.
T Consensus 224 ~~~~i~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 224 LAGKIREGKFRR-----------------------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHHTCCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHhhccccc-----------------------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111111100000 00123456889999999999999999999998654
No 224
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.1e-39 Score=364.90 Aligned_cols=253 Identities=26% Similarity=0.315 Sum_probs=203.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.++||+|+||+||+|++..+++.||||++.... ......+.+|++++++++||||+++++++... .
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-----S 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-----S
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC-----C
Confidence 3468999999999999999999999999999999996432 33457789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec---CCCcEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD---HDMVAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl 706 (869)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 8999999999999999987654 389999999999999999999999 999999999999995 4568999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+|+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ..
T Consensus 166 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~ 230 (486)
T 3mwu_A 166 IDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DI 230 (486)
T ss_dssp CSCSCTTTBCCC-------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH
T ss_pred EECCcCeECCCCC---------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HH
Confidence 9999998654432 2234569999999999876 5999999999999999999999999753211 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......... ...+....++..+.+++.+||+.||++|||+.|+++.
T Consensus 231 ~~~i~~~~~~--------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 231 LKRVETGKYA--------------------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHHHTCCC--------------------SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHHHhCCCC--------------------CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111100000 0001112344568899999999999999999999874
No 225
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.7e-39 Score=365.13 Aligned_cols=258 Identities=27% Similarity=0.430 Sum_probs=203.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.++||+|+||.||+|.+. .+..||||+++.... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSCE
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------CceE
Confidence 467888999999999999999996 567899999975432 34678999999999999999999999753 4579
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++|+|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 255 iv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred EEehhhcCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 99999999999999975321 2489999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhhc
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +......
T Consensus 328 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~ 395 (452)
T 1fmk_A 328 RLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVE 395 (452)
T ss_dssp C---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHH
T ss_pred eecCCCce-------ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHH
Confidence 87654321 11223456889999999988899999999999999999999 99998753221 1111110
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
... ..+.+..++..+.+++.+||+.||++|||++++++.|+.+...
T Consensus 396 ~~~-----------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 396 RGY-----------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TTC-----------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred cCC-----------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 000 0011123456788999999999999999999999999987654
No 226
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5e-39 Score=342.22 Aligned_cols=277 Identities=19% Similarity=0.306 Sum_probs=202.3
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
++|++.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|++++++++||||+++++++... +..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC-----Cce
Confidence 57889999999999999999999899999999986433 23346788999999999999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ |+|.+++..... ..+++..++.++.|+++||+|||+. ||+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred EEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 99999997 599999987642 2489999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+....... .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||....... ......+..
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~ 220 (299)
T 2r3i_A 150 ARAFGVPV--------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTL 220 (299)
T ss_dssp HHHHCCCS--------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred hhhccCCc--------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHh
Confidence 98764322 1223346899999999988765 7999999999999999999999997533211 111111111
Q ss_pred cccccccccCccchhhhhhcc-cccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 791 LPEKVMEIVDPSLLLEVRANN-SMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
............-...+.... ..............+..+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000000000000 00000000011123467889999999999999999999987
No 227
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-39 Score=357.70 Aligned_cols=282 Identities=18% Similarity=0.213 Sum_probs=198.7
Q ss_pred HHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc----
Q 002897 550 SKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF---- 625 (869)
Q Consensus 550 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 625 (869)
....++|++.+.||+|+||+||+|++..+|+.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999999999999999864332 23479999999999999999999855321
Q ss_pred -----------------------------CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHH
Q 002897 626 -----------------------------NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIE 676 (869)
Q Consensus 626 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~ 676 (869)
.+....++||||++ |+|.+.+...... ...+++..+..++.||++||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHH
Confidence 23455889999998 4887777642110 124899999999999999999
Q ss_pred HHHhcCCCCeEecCCCCCceeec-CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccc
Q 002897 677 YLHHHCKPPVVHGDLKPSNVLLD-HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTG 754 (869)
Q Consensus 677 ~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~s 754 (869)
|||+. ||+||||||+||+++ .++.+||+|||.|+...... ......||+.|+|||++.+. .++.++
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~ 223 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATEYTPSI 223 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSSCCTHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCCCCcch
Confidence 99999 999999999999997 68899999999998764432 22345689999999988775 489999
Q ss_pred cchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccc--cccCccchhhhhhcccccCCCccchHHHHHHHHHHH
Q 002897 755 DVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVM--EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRI 832 (869)
Q Consensus 755 DvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 832 (869)
||||+||++|||++|+.||......+ .........-..... ...++.... ...............++..+..+.++
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTE-VRFPTLKAKDWRKILPEGTPSLAIDL 301 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC---CCCCCCCCCCHHHHSCTTCCHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCccccc-ccCCccCcccHHhhCCCCCCHHHHHH
Confidence 99999999999999999997532221 111111111000000 000000000 00000000000000112245678899
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 002897 833 GVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 833 i~~cl~~dP~~RPs~~evl~ 852 (869)
+.+||+.||++|||+.|+++
T Consensus 302 i~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 302 LEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhhCCCHHHHhc
Confidence 99999999999999999985
No 228
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.8e-40 Score=363.39 Aligned_cols=260 Identities=16% Similarity=0.161 Sum_probs=194.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeec---ccchhhHHHHHHHHH---HHhCCCCccceEE-------EE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNL---MQKGALKSFLTECEA---LRSIRHRNLIKII-------TI 619 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~---l~~l~h~niv~~~-------~~ 619 (869)
.++|++.+.||+|+||+||+|++..+|+.||||++.. ......+.+.+|+.+ ++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4678899999999999999999988999999999973 234456788999954 5555899999998 44
Q ss_pred eeccc-------cCCCc-----eEEEEeecccCCCHHHHHhhCCCccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002897 620 CSSID-------FNGVD-----FKAIVYDFMQNGSLEEWLHQNNDKLE-VCNLSLIQTLNIAIDVASAIEYLHHHCKPPV 686 (869)
Q Consensus 620 ~~~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 686 (869)
+.... +.+.. ..++||||+ +|+|.+++.......+ ...+++..++.++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 43321 00111 378999999 6799999986432100 11245688899999999999999999 99
Q ss_pred EecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-----------CCCcccc
Q 002897 687 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-----------EASMTGD 755 (869)
Q Consensus 687 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sD 755 (869)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++.+. .++.++|
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~D 295 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFD 295 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----------cccCCCC-cCccChhhhcccccccccccccccCChhhh
Confidence 9999999999999999999999999985322 2233457 999999999877 7999999
Q ss_pred chhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhh
Q 002897 756 VYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVV 835 (869)
Q Consensus 756 vwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 835 (869)
||||||++|||++|+.||......... ...... . ..++..+.+++.+
T Consensus 296 vwSlG~il~elltg~~Pf~~~~~~~~~-----~~~~~~-----~-----------------------~~~~~~~~~li~~ 342 (377)
T 3byv_A 296 AWALGLVIYWIWCADLPITKDAALGGS-----EWIFRS-----C-----------------------KNIPQPVRALLEG 342 (377)
T ss_dssp HHHHHHHHHHHHHSSCCC------CCS-----GGGGSS-----C-----------------------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCcccccccch-----hhhhhh-----c-----------------------cCCCHHHHHHHHH
Confidence 999999999999999999653221100 000000 0 0223567899999
Q ss_pred ccCCCCCCCCCHHHHHH--HHHHHHHhh
Q 002897 836 CSMESPTDRMQMRDVVV--KLCAAREAF 861 (869)
Q Consensus 836 cl~~dP~~RPs~~evl~--~L~~~~~~~ 861 (869)
||+.||++|||+.|+++ .++.+.+..
T Consensus 343 ~L~~dp~~Rpt~~e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 343 FLRYPKEDRLLPLQAMETPEYEQLRTEL 370 (377)
T ss_dssp HTCSSGGGCCCHHHHHTSHHHHHHHHHH
T ss_pred HcCCCchhCCCHHHHhhChHHHHHHHHH
Confidence 99999999999999996 555555543
No 229
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.5e-39 Score=350.54 Aligned_cols=288 Identities=23% Similarity=0.274 Sum_probs=208.1
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ......+.+|++++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468999999999999999999999899999999996433 3345678899999999999999999999876656666889
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||++ |+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQM-------LSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999997 59999998643 89999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCcc--ccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 712 AKFLPARPLDTVV--ETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 712 a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
+............ ..........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 237 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFG 237 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHH
Confidence 9877543221100 00012234578999999998654 678999999999999999999999997532211 1111111
Q ss_pred hhcc---cc-cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MVLP---EK-VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~~~---~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.... .. ......+.......................++..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 00 0000011000000000000000001111234567889999999999999999999987
No 230
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.7e-39 Score=352.63 Aligned_cols=201 Identities=25% Similarity=0.395 Sum_probs=175.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
.++|++.+.||+|+||+||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++... ...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 106 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GEI 106 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET-----TEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC-----CEE
Confidence 35799999999999999999999999999999999754 334457789999999999999999999997653 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||.
T Consensus 107 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 178 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 178 (360)
T ss_dssp EEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCC
T ss_pred EEEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCC
Confidence 99999999999999998754 3899999999999999999999832 799999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 179 ~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 179 SGQLIDS----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CHHHHHH----------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred Ccccccc----------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 8754321 123346899999999999999999999999999999999999999753
No 231
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=341.55 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.... ..+.+.+|+.+++.++||||+++++++... ...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN-----TDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeC-----CEE
Confidence 4568999999999999999999999899999999997543 347789999999999999999999997653 678
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNK-----TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 999999999999999974332 389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhc
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVL 791 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 791 (869)
+....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .... ...
T Consensus 172 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~-~~~ 238 (314)
T 3com_A 172 AGQLTDTM--------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAIF-MIP 238 (314)
T ss_dssp CEECBTTB--------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHH-HHH
T ss_pred chhhhhhc--------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHHH-HHh
Confidence 98664432 1223456899999999999989999999999999999999999999743211 1100 000
Q ss_pred ccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 792 PEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 792 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .+. ...+..++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~-----~~~----------------~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 239 TNP-----PPT----------------FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HSC-----CCC----------------CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCC-----Ccc----------------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000 000 0001123456889999999999999999999986
No 232
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.5e-39 Score=345.01 Aligned_cols=253 Identities=21% Similarity=0.318 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+++++.++||||+++++++... ...+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD-----GKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC-----CeEE
Confidence 46899999999999999999999989999999999776666678899999999999999999999997653 6789
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccccc
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLA 712 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 712 (869)
+||||+++++|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEEEeCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 99999999999999876433 389999999999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCCCCCccccCCCCCCccCcccccCCccc-----CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 713 KFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG-----TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
....... .......|++.|+|||++ .+..++.++|||||||++|+|++|+.||....... ......
T Consensus 165 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 235 (302)
T 2j7t_A 165 AKNLKTL--------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIA 235 (302)
T ss_dssp HHHHHHH--------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHH
T ss_pred ccccccc--------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHh
Confidence 5322110 112234689999999987 46678999999999999999999999997532211 011111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... .... ..+..++..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~----~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 236 KSD----PPTL---------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HSC----CCCC---------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ccC----Cccc---------------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 100 0000 011123456889999999999999999999986
No 233
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.9e-39 Score=356.38 Aligned_cols=199 Identities=23% Similarity=0.315 Sum_probs=173.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC------CCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI------RHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~ 626 (869)
..+|++.++||+|+||+||+|.+..+++.||||+++... ...+.+.+|+++++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~--- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR--- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET---
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC---
Confidence 457999999999999999999999999999999996532 3346677888888877 577999999997654
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--E
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV--A 704 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~ 704 (869)
...++||||+. ++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 172 --~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 172 --NHICMTFELLS-MNLYELIKKNKF----QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp --TEEEEEECCCC-CBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred --CeEEEEEeccC-CCHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 78999999996 699999987653 2489999999999999999999999 9999999999999999987 9
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 242 kL~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR-----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEeecccceecCCc-----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999754332 23356899999999999999999999999999999999999999764
No 234
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-38 Score=349.37 Aligned_cols=288 Identities=20% Similarity=0.240 Sum_probs=205.2
Q ss_pred cHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-----------hhhHHHHHHHHHHHhCCCCcc
Q 002897 545 SYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-----------GALKSFLTECEALRSIRHRNL 613 (869)
Q Consensus 545 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~ni 613 (869)
...++....++|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34677788899999999999999999999986 599999999854221 223788999999999999999
Q ss_pred ceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 002897 614 IKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKP 693 (869)
Q Consensus 614 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 693 (869)
+++++++...+.......++||||++ |+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 162 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI-----VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHP 162 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCCh
Confidence 99999987654445567899999997 589888876543 389999999999999999999999 999999999
Q ss_pred CceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCC
Q 002897 694 SNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRP 772 (869)
Q Consensus 694 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~p 772 (869)
+||+++.++.+||+|||.+...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.|
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 233 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTAD---------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233 (362)
T ss_dssp GGEEECTTCCEEECCTTC------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred HHEEEcCCCCEEEEecCcccccccc---------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCC
Confidence 9999999999999999999754332 22234568999999998877 6789999999999999999999999
Q ss_pred CCcCccCCchHHHhhhhhcccccc---cccCccchhhhhhcc-cccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 773 TDSMFHEGLTLHEFSKMVLPEKVM---EIVDPSLLLEVRANN-SMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 773 f~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|....... ............... ....+.......... ..............+..+.+++.+||+.||++|||+.
T Consensus 234 f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 312 (362)
T 3pg1_A 234 FRGSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312 (362)
T ss_dssp CCCSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 97532211 111111111100000 000000000000000 0000000111123356788999999999999999999
Q ss_pred HHHH
Q 002897 849 DVVV 852 (869)
Q Consensus 849 evl~ 852 (869)
|+++
T Consensus 313 ell~ 316 (362)
T 3pg1_A 313 QALR 316 (362)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9986
No 235
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.4e-39 Score=365.22 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=199.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|++..++..||+|++.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK-----RN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-----CE
Confidence 457999999999999999999999999999999996542 33457789999999999999999999997653 78
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~ 707 (869)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.. +.+||+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 899999999999999887654 389999999999999999999999 99999999999999764 459999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+|...... .......||+.|+|||++. +.++.++||||+||++|+|++|+.||...... ...
T Consensus 182 DfG~a~~~~~~---------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~ 246 (494)
T 3lij_A 182 DFGLSAVFENQ---------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EIL 246 (494)
T ss_dssp CCTTCEECBTT---------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH
T ss_pred ECCCCeECCCC---------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 99999876432 2233456999999999986 46999999999999999999999999753221 111
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
........ .. + .+....++..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~~i~~~~~-~~-~------------------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 247 RKVEKGKY-TF-D------------------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHHTCC-CC-C------------------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHHhCCC-CC-C------------------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 11110000 00 0 00111234567899999999999999999999863
No 236
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.9e-39 Score=337.37 Aligned_cols=249 Identities=26% Similarity=0.370 Sum_probs=196.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-----T 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----S
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 468999999999999999999999899999999996432 23456789999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 7899999999999999997654 389999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.+....... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... .....
T Consensus 156 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~ 221 (276)
T 2h6d_A 156 GLSNMMSDGE---------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFK 221 (276)
T ss_dssp CGGGCCCC----------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred ccccccCCCc---------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHH
Confidence 9998664432 1223468999999999988765 6899999999999999999999975321 11111
Q ss_pred hhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
....... . .+...+..+.+++.+||+.||++|||+.|+++.
T Consensus 222 ~~~~~~~-~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 222 KIRGGVF-Y-----------------------IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHCCC-C-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HhhcCcc-c-----------------------CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1100000 0 001223467899999999999999999999874
No 237
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.1e-39 Score=345.11 Aligned_cols=253 Identities=23% Similarity=0.277 Sum_probs=198.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCCCCccceEEEEeecc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIRHRNLIKIITICSSI 623 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 623 (869)
..++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 86 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 86 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES-
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC-
Confidence 3468999999999999999999999999999999986432 1223457899999999999999999999754
Q ss_pred ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 624 DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 87 -----~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 87 -----EDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp -----SSEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred -----CceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 33799999999999999997654 389999999999999999999999 9999999999999987664
Q ss_pred ---EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCccc---CCCCCCccccchhhhHHHHHHHcCCCCCCcCc
Q 002897 704 ---AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG---TGSEASMTGDVYSFGILLLEMFSRRRPTDSMF 777 (869)
Q Consensus 704 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~il~el~tg~~pf~~~~ 777 (869)
+||+|||.+....... ......||+.|+|||++ ....++.++|||||||++|+|++|+.||....
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 223 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGETS---------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223 (322)
T ss_dssp SCCEEECCCTTCEECCCCH---------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred CCeEEEccCccceeccccc---------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 9999999998764321 11234689999999986 35678999999999999999999999997543
Q ss_pred cCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 778 HEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
............... .. ......++..+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~------~~------------------~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 224 TQVSLKDQITSGKYN------FI------------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CSSCHHHHHHHTCCC------CC------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hHHHHHHHHHhCccc------cC------------------chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 322211111111000 00 0011134567889999999999999999999985
No 238
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.2e-38 Score=364.06 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=202.2
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc-------------hhhHHHHHHHHHHHhCCCCccceEEE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-------------GALKSFLTECEALRSIRHRNLIKIIT 618 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~ 618 (869)
..++|++.++||+|+||+||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999999999999999964321 23467899999999999999999999
Q ss_pred EeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 002897 619 ICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL 698 (869)
Q Consensus 619 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 698 (869)
++.+ ....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~-----~~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFED-----KKYFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEEC-----SSEEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEEc-----CCEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 9765 378999999999999999997654 389999999999999999999999 99999999999999
Q ss_pred cCCC---cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 699 DHDM---VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 699 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
+.++ .+||+|||+|....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY---------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS---------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCccEEEEECCCCEEcCCCC---------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 8776 69999999998765432 2234569999999999874 699999999999999999999999975
Q ss_pred CccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 776 MFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... ............ . .......++..+.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~-----~~~~~i~~~~~~--~------------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 250 QNDQ-----DIIKKVEKGKYY--F------------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp SSHH-----HHHHHHHHCCCC--C------------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCHH-----HHHHHHHcCCCC--C------------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 3221 111111110000 0 001112344678899999999999999999999863
No 239
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=346.46 Aligned_cols=280 Identities=19% Similarity=0.269 Sum_probs=200.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc--------
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSID-------- 624 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 624 (869)
.++|++.+.||+|+||.||+|.+..+|+.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 368999999999999999999999889999999998776667788999999999999999999999875321
Q ss_pred -cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCC
Q 002897 625 -FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-HDM 702 (869)
Q Consensus 625 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 702 (869)
+......++||||++ |+|.+++... ++++..++.++.|++.||+|||++ +|+||||||+||+++ .++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 234477899999997 5999999753 389999999999999999999999 999999999999997 567
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCc
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGL 781 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~ 781 (869)
.+||+|||.++....... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 232 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYS-----HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE- 232 (320)
T ss_dssp EEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred eEEEccCccccccCCCcc-----cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-
Confidence 999999999987643321 1122334567999999998765 678999999999999999999999997543211
Q ss_pred hHHHhhhhhccc---ccc---cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 782 TLHEFSKMVLPE---KVM---EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 782 ~~~~~~~~~~~~---~~~---~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
............ ... ............ ............++..+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 233 QMQLILESIPVVHEEDRQELLSVIPVYIRNDMT----EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTT----SCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhcCCCchhhhhhhhhcCccccccccc----CCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 111111110000 000 000000000000 00000001112345678999999999999999999999873
No 240
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=352.17 Aligned_cols=260 Identities=13% Similarity=0.103 Sum_probs=203.2
Q ss_pred HHhcCCCCCCeeeeecceEEEEEE-----ECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC---CCccceEEEEeec
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGI-----IGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR---HRNLIKIITICSS 622 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~ 622 (869)
...++|.+.++||+|+||+||+|. +..+++.||||+++... ...+..|+++++.++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345789999999999999999994 56689999999996543 356778888888886 9999999999765
Q ss_pred cccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--
Q 002897 623 IDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-- 700 (869)
Q Consensus 623 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-- 700 (869)
. +..++||||+++|+|.+++...... ....+++..++.++.||++||+|||+. +|+||||||+|||++.
T Consensus 139 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 139 Q-----NGSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp S-----SCEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred C-----CCcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 4 6789999999999999999753211 112499999999999999999999999 9999999999999998
Q ss_pred ---------CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCC
Q 002897 701 ---------DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRR 771 (869)
Q Consensus 701 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~ 771 (869)
++.+||+|||+|+.+..... ........||+.|+|||++.+..++.++|||||||++|||+||+.
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 283 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY 283 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccccccccCCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 89999999999976532211 122344679999999999999999999999999999999999999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCC-CCHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDR-MQMRDV 850 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~ev 850 (869)
||......... ...... .. ...+.+.+++..|++.+|.+| |+++++
T Consensus 284 pf~~~~~~~~~------------~~~~~~-----------------~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l 330 (365)
T 3e7e_A 284 MKVKNEGGECK------------PEGLFR-----------------RL----PHLDMWNEFFHVMLNIPDCHHLPSLDLL 330 (365)
T ss_dssp CCEEEETTEEE------------ECSCCT-----------------TC----SSHHHHHHHHHHHHCCCCTTCCCCHHHH
T ss_pred ccccCCCCcee------------echhcc-----------------cc----CcHHHHHHHHHHHcCCCCCCcchHHHHH
Confidence 98542211000 000000 00 013356688999999999999 678888
Q ss_pred HHHHHHHHHhh
Q 002897 851 VVKLCAAREAF 861 (869)
Q Consensus 851 l~~L~~~~~~~ 861 (869)
.+.|++..+..
T Consensus 331 ~~~l~~~l~~~ 341 (365)
T 3e7e_A 331 RQKLKKVFQQH 341 (365)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888876654
No 241
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.7e-39 Score=366.89 Aligned_cols=252 Identities=27% Similarity=0.353 Sum_probs=204.8
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
.++|++.++||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~ 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-----G 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----S
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----C
Confidence 457999999999999999999999999999999996432 34467889999999999999999999997653 7
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEE
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL---DHDMVAHV 706 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl 706 (869)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 8999999999999999998754 389999999999999999999999 99999999999999 56789999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
+|||+|....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ..
T Consensus 171 ~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~ 235 (484)
T 3nyv_A 171 IDFGLSTHFEASK---------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DI 235 (484)
T ss_dssp CCTTHHHHBCCCC---------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH
T ss_pred EeeeeeEEccccc---------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HH
Confidence 9999998765432 2233569999999999876 6899999999999999999999999753211 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.......... ...+....++..+.+++.+||+.||++|||+.|+++.
T Consensus 236 ~~~i~~~~~~--------------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 236 LKKVEKGKYT--------------------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HHHHHHCCCC--------------------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCC--------------------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1111100000 0001112344568899999999999999999999873
No 242
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=346.64 Aligned_cols=266 Identities=21% Similarity=0.315 Sum_probs=202.0
Q ss_pred ccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeec
Q 002897 544 ISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSS 622 (869)
Q Consensus 544 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 622 (869)
+.+.++....++|++.+.||+|+||.||+|++..+|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 334444556789999999999999999999999899999999997543 3347789999999999 89999999999876
Q ss_pred cccC-CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 002897 623 IDFN-GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD 701 (869)
Q Consensus 623 ~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 701 (869)
.... .....++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~ 165 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTEN 165 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTT
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCC
Confidence 4221 14678999999999999999987532 2489999999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+.+||+|||.+....... .......|++.|+|||++. +..++.++|||||||++|+|++|+.||...
T Consensus 166 ~~~kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 166 AEVKLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp CCEEECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCEEEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999997654321 1223456899999999986 556899999999999999999999999643
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ... ............ ...++..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~----~~~-~~~~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 238 HPM----RAL-FLIPRNPAPRLK----------------------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CHH----HHH-HHHHHSCCCCCS----------------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cHH----HHH-HHhhcCccccCC----------------------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 211 110 000000000000 0122456889999999999999999999987
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.6e-38 Score=336.62 Aligned_cols=255 Identities=22% Similarity=0.279 Sum_probs=186.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||+||+|++..+|+.||+|+++... ....+.+..+...++.++||||+++++++... ..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~-----~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----GD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----SS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc-----CC
Confidence 468999999999999999999999999999999996542 22223344555567888999999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++ +|.+++...... ...+++..++.++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhcc-chHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 8999999974 888877652111 124899999999999999999999853 89999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCccc----CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG----TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
.+....... ......||+.|+|||++ .+..++.++||||+||++|+|++|+.||.............
T Consensus 156 ~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 156 ISGYLVDDV---------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp -----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred Ccccccccc---------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 998664432 12234689999999995 55678999999999999999999999997432221111111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.....+. .....++..+.+++.+||+.||++|||++|+++
T Consensus 227 ~~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQ--------------------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCC--------------------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCC--------------------------cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1111000 000123456889999999999999999999987
No 244
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.6e-38 Score=336.43 Aligned_cols=254 Identities=23% Similarity=0.335 Sum_probs=203.7
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---------chhhHHHHHHHHHHHhCC-CCccceEEEEe
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---------KGALKSFLTECEALRSIR-HRNLIKIITIC 620 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~~~~~~ 620 (869)
...++|++.+.||+|+||.||+|++..+|+.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999999999999999996442 123466789999999995 99999999997
Q ss_pred eccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 002897 621 SSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH 700 (869)
Q Consensus 621 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 700 (869)
.. ....++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 94 ~~-----~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~ 159 (298)
T 1phk_A 94 ET-----NTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDD 159 (298)
T ss_dssp EC-----SSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred cc-----CCeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcC
Confidence 54 378999999999999999998653 389999999999999999999999 9999999999999999
Q ss_pred CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC------CCCCCccccchhhhHHHHHHHcCCCCCC
Q 002897 701 DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT------GSEASMTGDVYSFGILLLEMFSRRRPTD 774 (869)
Q Consensus 701 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~il~el~tg~~pf~ 774 (869)
++.+||+|||.+....... ......|++.|+|||++. ...++.++||||||+++|+|++|+.||.
T Consensus 160 ~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 230 (298)
T 1phk_A 160 DMNIKLTDFGFSCQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230 (298)
T ss_dssp TCCEEECCCTTCEECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCcEEEecccchhhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence 9999999999998765432 223356899999999874 4568899999999999999999999996
Q ss_pred cCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 775 SMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
..... ........... ... .+....++..+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~-----~~~~~~~~~~~-~~~-------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 231 HRKQM-----LMLRMIMSGNY-QFG-------------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CSSHH-----HHHHHHHHTCC-CCC-------------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CccHH-----HHHHHHhcCCc-ccC-------------------cccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 43211 11111110000 000 0011134556889999999999999999999975
No 245
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-38 Score=349.61 Aligned_cols=277 Identities=21% Similarity=0.245 Sum_probs=200.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 629 (869)
.++|.+.+.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+. ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35899999999999999999999999999999999643 23345778899999999999999999999865421 1222
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 3499999997 589888743 289999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .......
T Consensus 189 g~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~ 256 (371)
T 4exu_A 189 GLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 256 (371)
T ss_dssp TCC-------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred CcccccccC-----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 999754332 233568999999999877 678999999999999999999999997532211 1111111
Q ss_pred hh-c-ccccccccCccchhhhhhc-ccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 789 MV-L-PEKVMEIVDPSLLLEVRAN-NSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 789 ~~-~-~~~~~~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.. . +..............+... ..............++..+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 11 0 0011111111110000000 0000000011112345678999999999999999999999863
No 246
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.8e-38 Score=333.64 Aligned_cols=248 Identities=19% Similarity=0.290 Sum_probs=199.0
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 628 (869)
..++|++.+.||+|+||+||+|++..+++.||+|++... .......+.+|+.++..+ +||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 356899999999999999999999989999999999753 234457788999999999 999999999997654
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-------
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD------- 701 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~------- 701 (869)
+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred CeEEEEEEecCCCcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 7889999999999999999864311 12489999999999999999999999 99999999999999844
Q ss_pred ------------CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHc
Q 002897 702 ------------MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFS 768 (869)
Q Consensus 702 ------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~t 768 (869)
..+||+|||.+....... ...||+.|+|||++.+. .+++++|||||||++|+|++
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQ------------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG 226 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSC------------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccCCceEEEEcccccccccCCcc------------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc
Confidence 479999999998664321 23489999999998776 56789999999999999999
Q ss_pred CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 769 RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 769 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|.+|+... ...........+ . .+..++..+.+++.+||+.||++|||+.
T Consensus 227 ~~~~~~~~----~~~~~~~~~~~~----~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 275 (289)
T 1x8b_A 227 AEPLPRNG----DQWHEIRQGRLP----R-----------------------IPQVLSQEFTELLKVMIHPDPERRPSAM 275 (289)
T ss_dssp CCCCCSSS----HHHHHHHTTCCC----C-----------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCCcch----hHHHHHHcCCCC----C-----------------------CCcccCHHHHHHHHHHhCCCcccCCCHH
Confidence 99876431 111111111100 0 0012345678999999999999999999
Q ss_pred HHHH
Q 002897 849 DVVV 852 (869)
Q Consensus 849 evl~ 852 (869)
|+++
T Consensus 276 ~ll~ 279 (289)
T 1x8b_A 276 ALVK 279 (289)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 9976
No 247
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-39 Score=344.09 Aligned_cols=263 Identities=27% Similarity=0.379 Sum_probs=198.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-CC--eEEEEEEeecc---cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-NG--MLVAVKVLNLM---QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.++|++.+.||+|+||+||+|++.. ++ ..||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 3579999999999999999998642 33 36899998643 33456788999999999999999999999764
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
...++||||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||
T Consensus 93 --~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 93 --PPMKMVTELAPLGSLLDRLRKHQG-----HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred --CCceeeEecccCCCHHHHHHhccC-----CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 237899999999999999987543 389999999999999999999999 9999999999999999999999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHH
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~ 785 (869)
+|||.+.......... .......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .
T Consensus 163 ~Dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~ 232 (291)
T 1u46_A 163 GDFGLMRALPQNDDHY-----VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----Q 232 (291)
T ss_dssp CCCTTCEECCC-CCEE-----EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----H
T ss_pred ccccccccccccccch-----hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----H
Confidence 9999998775543111 12233457889999999988889999999999999999999 99999753211 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
........... ......++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 233 ~~~~~~~~~~~----------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 233 ILHKIDKEGER----------------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp HHHHHHTSCCC----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred HHHHHHccCCC----------------------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11111100000 0001134456889999999999999999999999999876543
No 248
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-39 Score=349.19 Aligned_cols=256 Identities=23% Similarity=0.309 Sum_probs=202.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEEC---CCCeEEEEEEeeccc----chhhHHHHHHHHHHHhC-CCCccceEEEEeeccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIG---ENGMLVAVKVLNLMQ----KGALKSFLTECEALRSI-RHRNLIKIITICSSID 624 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 624 (869)
.++|++.++||+|+||.||+|++. .+|+.||||+++... ....+.+.+|+++++.+ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 468999999999999999999984 489999999986432 23345677899999999 699999999987653
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 132 ----~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 132 ----TKLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp ----TEEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred ----ceEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 67899999999999999998654 389999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC--CCCccccchhhhHHHHHHHcCCCCCCcCccCCch
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS--EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLT 782 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~ 782 (869)
||+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .
T Consensus 199 kl~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~ 270 (355)
T 1vzo_A 199 VLTDFGLSKEFVADET-------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-S 270 (355)
T ss_dssp EESCSSEEEECCGGGG-------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-C
T ss_pred EEeeCCCCeecccCCC-------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-h
Confidence 9999999986543211 222345699999999998863 47899999999999999999999997533221 1
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-----QMRDVVVKL 854 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 854 (869)
...+........ ...+.+++..+.+++.+||+.||++|| |++|+++..
T Consensus 271 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 271 QAEISRRILKSE------------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHHHHHHHCC------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHHHHHHhccC------------------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 122211111000 001112345678999999999999999 999998743
No 249
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.5e-38 Score=340.21 Aligned_cols=279 Identities=22% Similarity=0.346 Sum_probs=206.0
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEEC-CCCeEEEEEEeecccc--hhhHHHHHHHHHHHhC---CCCccceEEEEeeccc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIG-ENGMLVAVKVLNLMQK--GALKSFLTECEALRSI---RHRNLIKIITICSSID 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~ 624 (869)
.+.++|++.+.||+|+||.||+|++. .+|+.||+|+++.... .....+.+|+.+++.+ +||||+++++++....
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 34578999999999999999999995 6789999999964332 2234566788777766 8999999999987443
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVA 704 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 704 (869)
.......++||||++ |+|.+++...... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~ 159 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQI 159 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCE
Confidence 345578899999997 6999999876432 489999999999999999999999 99999999999999999999
Q ss_pred EEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 705 HVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 705 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
||+|||.+...... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ...
T Consensus 160 kl~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~ 229 (326)
T 1blx_A 160 KLADFGLARIYSFQ---------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLG 229 (326)
T ss_dssp EECSCCSCCCCCGG---------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHH
T ss_pred EEecCcccccccCC---------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHH
Confidence 99999999765422 12234568999999999999899999999999999999999999997543211 111
Q ss_pred Hhhhhhc-cc--ccccccC-ccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 785 EFSKMVL-PE--KVMEIVD-PSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~-~~--~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... +. .+..... +.. .+.. ............++..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~i~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 230 KILDVIGLPGEEDWPRDVALPRQ--AFHS---KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHCCCCGGGSCTTCSSCGG--GSCC---CCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcCCCCcccCccccccchh--hhcc---cCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111110 00 0000000 000 0000 0000000111234567889999999999999999999985
No 250
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.1e-39 Score=352.67 Aligned_cols=268 Identities=12% Similarity=0.022 Sum_probs=187.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhC--CCCccceEE-------EEe
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSI--RHRNLIKII-------TIC 620 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~ 620 (869)
..+|++.+.||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.+++.+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345889999999999999999999899999999997643 23456677885554444 699988855 333
Q ss_pred eccccC------------CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHH------HHHHHHHHHHHHHHHhcC
Q 002897 621 SSIDFN------------GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQT------LNIAIDVASAIEYLHHHC 682 (869)
Q Consensus 621 ~~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~ 682 (869)
...... .....++||||++ |+|.+++..... .+++..+ ..++.||++||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 221100 0145899999998 899999987532 2444555 77889999999999999
Q ss_pred CCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhh
Q 002897 683 KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFG 760 (869)
Q Consensus 683 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG 760 (869)
+|+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+ ..++.++||||||
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG 280 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----------GPASSVPVTYAPREFLNASTATFTHALNAWQLG 280 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----------EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----------ccCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence 9999999999999999999999999999865422 113456799999999987 6799999999999
Q ss_pred HHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCC
Q 002897 761 ILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMES 840 (869)
Q Consensus 761 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 840 (869)
|++|||++|+.||......... .+...... ...... ...+....++..+.+++.+||+.|
T Consensus 281 ~il~elltg~~Pf~~~~~~~~~--~~~~~~~~----~~~~~~--------------~~~~~~~~~~~~~~~li~~~L~~d 340 (371)
T 3q60_A 281 LSIYRVWCLFLPFGLVTPGIKG--SWKRPSLR----VPGTDS--------------LAFGSCTPLPDFVKTLIGRFLNFD 340 (371)
T ss_dssp HHHHHHHHSSCSTTBCCTTCTT--CCCBCCTT----SCCCCS--------------CCCTTSSCCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHhCCCCCCCcCccccc--chhhhhhh----hccccc--------------cchhhccCCCHHHHHHHHHHcCCC
Confidence 9999999999999764322111 00000000 000000 000011134567889999999999
Q ss_pred CCCCCCHHHHHH--HHHHHHHh
Q 002897 841 PTDRMQMRDVVV--KLCAAREA 860 (869)
Q Consensus 841 P~~RPs~~evl~--~L~~~~~~ 860 (869)
|++|||+.|+++ .++.+...
T Consensus 341 P~~Rpt~~e~l~hp~f~~~~~~ 362 (371)
T 3q60_A 341 RRRRLLPLEAMETPEFLQLQNE 362 (371)
T ss_dssp TTTCCCHHHHTTSHHHHHHHHH
T ss_pred hhhCCCHHHHhcCHHHHHHHHH
Confidence 999999999975 44444443
No 251
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.6e-39 Score=343.29 Aligned_cols=272 Identities=21% Similarity=0.294 Sum_probs=185.4
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++... +
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-----D 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS-----S
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec-----C
Confidence 34578999999999999999999998899999999986433 33456788999999999999999999997653 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCc--ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDK--LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 789999999999999998752110 0122489999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
|||.+.......... .........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... ..
T Consensus 164 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~ 239 (303)
T 2vwi_A 164 DFGVSAFLATGGDIT---RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LT 239 (303)
T ss_dssp CCHHHHHCC------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HH
T ss_pred eccchheeccCCCcc---chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HH
Confidence 999998765432110 0112234568999999998865 468999999999999999999999997543221111 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.....+.......++. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKE------------------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HTSSCCCTTC-----C------------------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hccCCCccccccccch------------------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0100000000000000 01123456889999999999999999999986
No 252
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3.4e-38 Score=350.41 Aligned_cols=280 Identities=18% Similarity=0.248 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC--------CCccceEEEEeeccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR--------HRNLIKIITICSSID 624 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~ 624 (869)
.++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36899999999999999999999999999999999643 334567889999999985 788999999876431
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC--
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDM-- 702 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 702 (869)
......++||||+ ++++.+++..... ..+++..++.++.||+.||+|||+++ ||+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 2346889999999 5577766665432 24899999999999999999999964 799999999999999775
Q ss_pred -----------------------------------------------cEEEccccccccCCCCCCCCccccCCCCCCccC
Q 002897 703 -----------------------------------------------VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKG 735 (869)
Q Consensus 703 -----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g 735 (869)
.+||+|||.|...... .....|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCC
Confidence 7999999999865432 233468
Q ss_pred cccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchH-----HHhhhhh--cccccc--cccCccchhh
Q 002897 736 TVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTL-----HEFSKMV--LPEKVM--EIVDPSLLLE 806 (869)
Q Consensus 736 t~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~-----~~~~~~~--~~~~~~--~~~d~~~~~~ 806 (869)
|+.|+|||++.+..++.++|||||||++|||++|+.||.......... ....... .+.... ..........
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 335 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 335 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCT
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCC
Confidence 999999999999899999999999999999999999997644332111 0110000 000000 0000000000
Q ss_pred hhhcccccC---C-------CccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 807 VRANNSMSR---G-------GERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 807 ~~~~~~~~~---~-------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
......... . .......+.+..+.+++.+||+.||++|||++|+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000000 0 001123456778999999999999999999999985
No 253
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=332.35 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=201.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc----chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ----KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. .+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 478999999999999999999999999999999996432 2345788999999999999999999999753 234
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGD 708 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 708 (869)
...++||||++++ +.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 6789999999876 7777776432 2489999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC--CCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 709 FGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE--ASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 709 fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
||.+......... .......|++.|+|||++.+.. ++.++|||||||++|+|++|+.||.... ....
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~ 221 (305)
T 2wtk_C 153 LGVAEALHPFAAD------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKL 221 (305)
T ss_dssp CTTCEECCTTCSS------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHH
T ss_pred cccccccCccccc------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHH
Confidence 9999876543211 1223456899999999987654 4789999999999999999999997522 1111
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
......... ..+..++..+.+++.+||+.||++|||++|+++.
T Consensus 222 ~~~i~~~~~------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 222 FENIGKGSY------------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHHHHCCC------------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHHhcCCC------------------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111110000 0001234567899999999999999999999874
No 254
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.5e-38 Score=372.74 Aligned_cols=250 Identities=23% Similarity=0.297 Sum_probs=204.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc---cchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM---QKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 627 (869)
..++|++.++||+|+||.||+|++..+++.||||+++.. .....+.+..|..++..+ +||+|+++++++. +
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~-----~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ-----T 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-----C
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-----e
Confidence 456899999999999999999999999999999999743 234457788999999988 7999999999854 3
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
.+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++++||+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 478999999999999999998754 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||+|+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..
T Consensus 485 DFGla~~~~~~~--------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~ 551 (674)
T 3pfq_A 485 DFGMCKENIWDG--------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELF 551 (674)
T ss_dssp CCTTCEECCCTT--------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH
T ss_pred ecceeeccccCC--------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHH
Confidence 999998643322 223456799999999999999999999999999999999999999975321 1222
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQM-----RDVVV 852 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 852 (869)
..+...... .+...+.++.+++.+||+.||++||++ +||++
T Consensus 552 ~~i~~~~~~------------------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 552 QSIMEHNVA------------------------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHSSCCC------------------------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHhCCCC------------------------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 222111100 001234567899999999999999997 66653
No 255
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.6e-39 Score=367.41 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=207.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCceE
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..++|++.++||+|+||.||+|.+. .+..||||+++.... ..+.+.+|++++++++||||+++++++.. ...
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~ 336 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 336 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred chhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccc
Confidence 3467888999999999999999996 567899999975432 34679999999999999999999999753 457
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGL 711 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 711 (869)
++||||+++|+|.++++.... ..+++.+++.++.||++||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 409 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL 409 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred eEeeehhcCCcHHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccc
Confidence 999999999999999975321 2389999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHhhhhh
Q 002897 712 AKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 712 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~ 790 (869)
++....... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.....
T Consensus 410 a~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i 477 (535)
T 2h8h_A 410 ARLIEDNEY-------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQV 477 (535)
T ss_dssp TTTCCCHHH-------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHH
T ss_pred ceecCCCce-------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence 986543210 11223456789999999988899999999999999999999 99998753221 111111
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
.... ....+..++..+.+++.+||+.||++|||+++|++.|+.+...
T Consensus 478 ~~~~-----------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 478 ERGY-----------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HTTC-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HcCC-----------------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1000 0001123456788999999999999999999999999887543
No 256
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.8e-38 Score=342.85 Aligned_cols=256 Identities=22% Similarity=0.294 Sum_probs=197.1
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHHH-HHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECEA-LRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.+.||+|+||+||+|++..+|+.||||+++... .....++..|..+ ++.++||||+++++++... +
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~-----~ 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE-----G 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-----S
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-----C
Confidence 3467888999999999999999999899999999996542 2334556666665 7778999999999997653 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++ +|.+++...... ...+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+||
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Df 198 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDF 198 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHT--SCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCC
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeC
Confidence 78999999975 999988752110 124899999999999999999999743 8999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccC----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+++...... ......||+.|+|||++. ...++.++|||||||++|||++|+.||............
T Consensus 199 g~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~ 269 (340)
T 3an0_A 199 GISGYLVDSV---------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 269 (340)
T ss_dssp SHHHHHSCHH---------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH
T ss_pred CCceeccccc---------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH
Confidence 9998654321 112246899999999964 346899999999999999999999999753221111111
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
...... +. .....++..+.+++.+||+.||++|||+.|+++
T Consensus 270 ~~~~~~---------~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 270 VVEEPS---------PQ-----------------LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHSCC---------CC-----------------CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcCCC---------CC-----------------CCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111000 00 001123456889999999999999999999987
No 257
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.6e-39 Score=355.37 Aligned_cols=275 Identities=21% Similarity=0.268 Sum_probs=197.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 631 (869)
..+|++.+.||+|+||.||+|++..+|+.||||++.... ....+|+++++.++||||+++++++..... .+....
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 346889999999999999999999899999999986432 223479999999999999999998765322 233457
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD-MVAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfg 710 (869)
++||||+++ ++.+.+..... ....+++..++.++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred Eeehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 799999976 67666553211 012489999999999999999999999 99999999999999965 578999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+....+.
T Consensus 203 ~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~ 272 (420)
T 1j1b_A 203 SAKQLVRGE---------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKV 272 (420)
T ss_dssp TCEECCTTC---------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred hhhhcccCC---------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH
Confidence 998764432 12335689999999998765 6899999999999999999999999753221 111122111
Q ss_pred hccc---ccccccCccchhhhhhcccccCCCccc---hHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPE---KVMEIVDPSLLLEVRANNSMSRGGERV---KIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.-.. .+.. .++.... +. ........+ .....+.++.+|+.+||+.||++|||+.|+++
T Consensus 273 lg~p~~~~~~~-~~~~~~~-~~---~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 273 LGTPTREQIRE-MNPNYTE-FK---FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCHHHHHH-HCSCCCC-CC---CCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCCHHHHHh-hChhhhh-hc---cCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 1000 0000 0000000 00 000000000 01123467889999999999999999999986
No 258
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.6e-38 Score=345.65 Aligned_cols=203 Identities=24% Similarity=0.323 Sum_probs=171.9
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CC-----ccceEEEEeeccc
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HR-----NLIKIITICSSID 624 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~ 624 (869)
...++|++.+.||+|+||+||+|++..+++.||||+++.. ......+..|+.+++.++ |+ +|+++++++...
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~- 128 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR- 128 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET-
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC-
Confidence 3457899999999999999999999999999999999643 233467788999988884 55 499999987653
Q ss_pred cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--CCC
Q 002897 625 FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD--HDM 702 (869)
Q Consensus 625 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~ 702 (869)
...++||||++ |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++
T Consensus 129 ----~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 129 ----NHLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp ----TEEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred ----CceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 78999999996 599999987642 2489999999999999999999952 12899999999999994 477
Q ss_pred cEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 703 VAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 703 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 199 ~~kL~DFG~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEEECCCTTCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cEEEEeccCceecccc-----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8999999999876432 22356899999999999999999999999999999999999999753
No 259
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-38 Score=350.94 Aligned_cols=278 Identities=19% Similarity=0.244 Sum_probs=193.9
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~ 631 (869)
..+|++.++||+|+||+||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++..... .+....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3579999999999999999999975555 88887753322 22479999999999999999999865432 334557
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCCcEEEcccc
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-HDMVAHVGDFG 710 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfg 710 (869)
++||||++++.+......... ...+++..++.++.||++||+|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKL---KQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEeeccCccHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 899999987544333221110 12489999999999999999999999 999999999999999 79999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKM 789 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 789 (869)
+|+...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ ......+.
T Consensus 188 ~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~ 257 (394)
T 4e7w_A 188 SAKILIAGE---------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKV 257 (394)
T ss_dssp TCEECCTTC---------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred CcccccCCC---------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 998764432 22345689999999998765 58999999999999999999999997643211 11111111
Q ss_pred hcccc--cccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 790 VLPEK--VMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 790 ~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.-... .....++........ ...............+.++.+++.+||+.||++|||+.|+++
T Consensus 258 ~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 258 LGTPSREQIKTMNPNYMEHKFP-QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCCCCHHHHHHHCGGGSSSCCC-CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hCCCCHHHHHhhChhhhhhccc-cccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 10000 000000000000000 000000000001124567889999999999999999999986
No 260
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.7e-38 Score=335.45 Aligned_cols=265 Identities=23% Similarity=0.320 Sum_probs=196.3
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-------
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSID------- 624 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 624 (869)
..++|++.+.||+|+||.||+|++..+|+.||||++... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356799999999999999999999989999999999643 344577899999999999999999999876421
Q ss_pred -cCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 002897 625 -FNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV 703 (869)
Q Consensus 625 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 703 (869)
.......++||||+++|+|.+++..... .+++..++.++.|+++||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENL-----NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCG-----GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 1235678999999999999999987543 378899999999999999999999 9999999999999999999
Q ss_pred EEEccccccccCCCCCCCCc------cccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 704 AHVGDFGLAKFLPARPLDTV------VETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~------~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+||+|||.+........... ...........|++.|+|||++.+. .++.++|||||||++|+|++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 99999999987643211000 0001223445689999999998764 68999999999999999998 55421
Q ss_pred ccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 777 FHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. ............ ....+. .....+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~----~~~~~~~~~~~~--~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 ME----RVNILKKLRSVS--IEFPPD------------------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HH----HHHHHHHHHSTT--CCCCTT------------------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hh----HHHHHHhccccc--cccCcc------------------ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 11 111111110000 000000 01123456789999999999999999999987
No 261
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.8e-38 Score=329.87 Aligned_cols=253 Identities=26% Similarity=0.317 Sum_probs=202.9
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGV 628 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 628 (869)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++...
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS----- 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-----
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-----
Confidence 34578999999999999999999999899999999996433 23457889999999999999999999997653
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEE
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD---MVAH 705 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~k 705 (869)
...++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.+ +.+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CeEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 77899999999999999987654 389999999999999999999999 99999999999999764 4799
Q ss_pred EccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHH
Q 002897 706 VGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHE 785 (869)
Q Consensus 706 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~ 785 (869)
|+|||.+....... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .
T Consensus 165 L~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~ 229 (287)
T 2wei_A 165 IIDFGLSTCFQQNT---------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----D 229 (287)
T ss_dssp ECSTTGGGTBCCCS---------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----H
T ss_pred EeccCcceeecCCC---------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----H
Confidence 99999998654332 1223458999999999876 4899999999999999999999999753211 1
Q ss_pred hhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 786 FSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 786 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........... .+ .+....++..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~--~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 230 ILKRVETGKYA--FD------------------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHHCCCC--CC------------------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCCC--CC------------------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 11111100000 00 0011123456889999999999999999999987
No 262
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.3e-38 Score=339.95 Aligned_cols=259 Identities=20% Similarity=0.290 Sum_probs=177.3
Q ss_pred HhcCCCCCC-eeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 552 ATSEFSSSN-MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 552 ~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
..++|.+.+ +||+|+||+||+|.+..+|+.||||++.... .........++.++||||+++++++... ..+...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENM-HHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCce
Confidence 356888855 6999999999999999999999999986422 1222233345667999999999998653 233466
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---DMVAHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 707 (869)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 8999999999999999987643 2489999999999999999999999 9999999999999976 4569999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.+....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||........... ..
T Consensus 174 Dfg~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~ 242 (336)
T 3fhr_A 174 DFGFAKETTQNA----------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MK 242 (336)
T ss_dssp CCTTCEEC--------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccceeccccc----------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HH
Confidence 999998654321 2334689999999999888899999999999999999999999975332211000 00
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
...... .... .......++..+.+++.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~-~~~~-------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 243 RRIRLG-QYGF-------------------PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---------CC-------------------CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Hhhhcc-cccc-------------------CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000000 0000 000111345568899999999999999999999973
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.8e-37 Score=336.76 Aligned_cols=274 Identities=19% Similarity=0.276 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEE-CCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCC------ccceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGII-GENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHR------NLIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||.||+|.+ ..+++.||||+++... ...+.+.+|+++++.++|+ +++++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~-- 89 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH-- 89 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET--
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC--
Confidence 36899999999999999999998 5689999999996432 3456788999999988655 599999987653
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-----
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH----- 700 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~----- 700 (869)
+..++||||+ +++|.+++..... .++++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 90 ---~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 90 ---GHICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred ---CcEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 6899999999 8899999987653 2489999999999999999999999 9999999999999987
Q ss_pred --------------CCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHH
Q 002897 701 --------------DMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEM 766 (869)
Q Consensus 701 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el 766 (869)
++.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 227 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEY 227 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred ccCCccccccccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHH
Confidence 668999999999864332 2345689999999999998999999999999999999
Q ss_pred HcCCCCCCcCccCCchHHHhhhhh--cccccccc--------------cCccchhhhhhcccccCCCccchHHHHHHHHH
Q 002897 767 FSRRRPTDSMFHEGLTLHEFSKMV--LPEKVMEI--------------VDPSLLLEVRANNSMSRGGERVKIEECLVAVI 830 (869)
Q Consensus 767 ~tg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~--------------~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 830 (869)
++|+.||....... ......... .+...... ..........................+++.+.
T Consensus 228 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 306 (339)
T 1z57_A 228 YLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306 (339)
T ss_dssp HHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHH
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHH
Confidence 99999997532211 111111100 00000000 00000000000000000000111234567899
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 002897 831 RIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 831 ~li~~cl~~dP~~RPs~~evl~ 852 (869)
+++.+||+.||++|||++|+++
T Consensus 307 ~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 307 DLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp HHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHhCcCcccccCHHHHhc
Confidence 9999999999999999999985
No 264
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=342.53 Aligned_cols=276 Identities=21% Similarity=0.241 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-CCCc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICSSIDF-NGVD 629 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 629 (869)
.++|.+.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35799999999999999999999999999999999643 23345678999999999999999999999765321 1123
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred eEEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 4699999997 588877643 289999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-CCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhh
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSK 788 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 788 (869)
|.++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .......
T Consensus 171 g~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~ 238 (353)
T 3coi_A 171 GLARHADAE-----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 238 (353)
T ss_dssp TCTTC-------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHH
T ss_pred ccccCCCCC-----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 999754322 223468999999999877 678999999999999999999999997532211 1111111
Q ss_pred hh--cccccccccCccchhhh-hhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 789 MV--LPEKVMEIVDPSLLLEV-RANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 789 ~~--~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.. .+..............+ .................++..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 10 00001111110000000 000000000001111234567889999999999999999999986
No 265
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.9e-38 Score=337.43 Aligned_cols=261 Identities=21% Similarity=0.359 Sum_probs=196.8
Q ss_pred ccHHHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc--cchhhHHHHHHHHHHHhCC--CCccceEEEE
Q 002897 544 ISYAKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM--QKGALKSFLTECEALRSIR--HRNLIKIITI 619 (869)
Q Consensus 544 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~~~~~ 619 (869)
+.+..+....++|++.+.||+|+||.||+|.+. +++.||||++... .....+.+.+|++++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 333444445678999999999999999999996 6999999999643 3345678899999999996 5999999999
Q ss_pred eeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec
Q 002897 620 CSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD 699 (869)
Q Consensus 620 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 699 (869)
+... ...++||| +.+++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++
T Consensus 97 ~~~~-----~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 161 (313)
T 3cek_A 97 EITD-----QYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV 161 (313)
T ss_dssp EECS-----SEEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE
T ss_pred eecC-----CEEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE
Confidence 7653 67899999 56889999998764 389999999999999999999999 999999999999996
Q ss_pred CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-----------CCCCccccchhhhHHHHHHHc
Q 002897 700 HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-----------SEASMTGDVYSFGILLLEMFS 768 (869)
Q Consensus 700 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwslG~il~el~t 768 (869)
+ +.+||+|||.+........ ........|++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 162 ~-~~~kL~Dfg~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~ 234 (313)
T 3cek_A 162 D-GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234 (313)
T ss_dssp T-TEEEECCCSSSCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHH
T ss_pred C-CeEEEeeccccccccCccc------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHh
Confidence 4 8999999999986644321 012234568999999999865 468889999999999999999
Q ss_pred CCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHH
Q 002897 769 RRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMR 848 (869)
Q Consensus 769 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 848 (869)
|+.||....... ........+..... . +...+..+.+++.+||+.||++|||++
T Consensus 235 g~~pf~~~~~~~---~~~~~~~~~~~~~~-~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 288 (313)
T 3cek_A 235 GKTPFQQIINQI---SKLHAIIDPNHEIE-F----------------------PDIPEKDLQDVLKCCLKRDPKQRISIP 288 (313)
T ss_dssp SSCTTTTCCSHH---HHHHHHHCTTSCCC-C----------------------CCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CCCchhhHHHHH---HHHHHHHhcccccC-C----------------------cccchHHHHHHHHHHccCCcccCcCHH
Confidence 999997532221 11111110000000 0 001234678999999999999999999
Q ss_pred HHHHH
Q 002897 849 DVVVK 853 (869)
Q Consensus 849 evl~~ 853 (869)
|+++.
T Consensus 289 ell~h 293 (313)
T 3cek_A 289 ELLAH 293 (313)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99874
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.4e-38 Score=343.10 Aligned_cols=289 Identities=21% Similarity=0.238 Sum_probs=194.0
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeecccc-
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDF- 625 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 625 (869)
.......++|++.+.||+|+||+||+|++..+|+.||||++.... .......+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445677789999999999999999999999899999999985432 233456778888899999999999999865422
Q ss_pred -CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCceeecC-C
Q 002897 626 -NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH--HHCKPPVVHGDLKPSNVLLDH-D 701 (869)
Q Consensus 626 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~ 701 (869)
......++||||+++ ++.+.+..... ....+++..+..++.|++.||+||| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 223347899999976 55544432111 0124899999999999999999999 88 9999999999999997 8
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCC-CCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSE-ASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
+.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||......
T Consensus 169 ~~~kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~- 238 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA- 238 (360)
T ss_dssp TEEEECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred CcEEEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-
Confidence 999999999998765432 223456899999999986654 899999999999999999999999763322
Q ss_pred chHHHhhhhhccc--ccccccCccchh-hhhhccccc-CCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 781 LTLHEFSKMVLPE--KVMEIVDPSLLL-EVRANNSMS-RGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 781 ~~~~~~~~~~~~~--~~~~~~d~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.......+..... ......++.... ......... ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 1111111111000 000000100000 000000000 00000001124567899999999999999999999986
No 267
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.3e-38 Score=365.86 Aligned_cols=261 Identities=21% Similarity=0.362 Sum_probs=206.7
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECC---CCeEEEEEEeeccc-chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCC
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGE---NGMLVAVKVLNLMQ-KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNG 627 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 627 (869)
..++|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 44678889999999999999999853 35689999986533 3445778999999999999999999998743
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 463 -~~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 463 -NPVWIIMELCTLGELRSFLQVRKF-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 457899999999999999986543 389999999999999999999999 99999999999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCchHHHh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~~~~~ 786 (869)
|||+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... +.
T Consensus 534 DFG~a~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~ 601 (656)
T 2j0j_A 534 DFGLSRYMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DV 601 (656)
T ss_dssp CCCCCCSCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HH
T ss_pred ecCCCeecCCCcc-------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HH
Confidence 9999987644321 11223456789999999988899999999999999999997 99999753221 11
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
......... ...+..++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 602 ~~~i~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 602 IGRIENGER-----------------------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HHHHHHTCC-----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCC-----------------------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 111100000 0011134457889999999999999999999999999987653
No 268
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.8e-38 Score=341.18 Aligned_cols=266 Identities=20% Similarity=0.322 Sum_probs=202.5
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchh-----------------hHHHHHHHHHHHhCCCCccce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGA-----------------LKSFLTECEALRSIRHRNLIK 615 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 615 (869)
.++|++.+.||+|+||.||+|.+ +|+.||||++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 89999999996432211 178999999999999999999
Q ss_pred EEEEeeccccCCCceEEEEeecccCCCHHHH------HhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEe
Q 002897 616 IITICSSIDFNGVDFKAIVYDFMQNGSLEEW------LHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVH 688 (869)
Q Consensus 616 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH 688 (869)
+++++... +..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . ||+|
T Consensus 108 ~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITNY-----DEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEESS-----SEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEeeC-----CeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 99997653 788999999999999998 54421 2358999999999999999999999 8 9999
Q ss_pred cCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCc-cccchhhhHHHHHH
Q 002897 689 GDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASM-TGDVYSFGILLLEM 766 (869)
Q Consensus 689 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwslG~il~el 766 (869)
|||||+||+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|+|
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l 245 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHH
Confidence 999999999999999999999999865432 22345689999999999887 5666 99999999999999
Q ss_pred HcCCCCCCcCccCCchHHHhhhhhcccccccccCc-cchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC
Q 002897 767 FSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDP-SLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM 845 (869)
Q Consensus 767 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 845 (869)
++|+.||................ ......+. ....... ..........++..+.+++.+||+.||++||
T Consensus 246 ~~g~~pf~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 246 FYNVVPFSLKISLVELFNNIRTK----NIEYPLDRNHFLYPLT------NKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHSSCSSCCSSCSHHHHHHHTSC----CCCCCCSSSSSTTTTC------C--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HhCCCCCCCCCcHHHHHHHHhcc----CcCCccchhhhhcccc------ccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 99999997643321111111111 10000000 0000000 0000011123456788999999999999999
Q ss_pred CHHHHHH
Q 002897 846 QMRDVVV 852 (869)
Q Consensus 846 s~~evl~ 852 (869)
|++|+++
T Consensus 316 s~~e~l~ 322 (348)
T 2pml_X 316 TSEDALK 322 (348)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999987
No 269
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.2e-37 Score=335.90 Aligned_cols=259 Identities=21% Similarity=0.276 Sum_probs=178.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc-chhhHHHHHHHH-HHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ-KGALKSFLTECE-ALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|.+..+|+.||||+++... ......+..|+. +++.++||||+++++++... +.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~-----~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE-----GD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-----SE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-----Cc
Confidence 468999999999999999999999899999999997543 233455666666 67778999999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++ +|.+++...... ....+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 8999999975 888877641100 0124899999999999999999999953 79999999999999999999999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCccc----CCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG----TGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEF 786 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~ 786 (869)
.++...... ......||+.|+|||++ .+..++.++|||||||++|+|++|+.||..........
T Consensus 172 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--- 239 (327)
T 3aln_A 172 ISGQLVDSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL--- 239 (327)
T ss_dssp SSCC---------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------
T ss_pred Cceeccccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH---
Confidence 997654321 12234689999999998 45678999999999999999999999997532111110
Q ss_pred hhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 787 SKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 787 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
........ +.+. ......++..+.+++.+||+.||++|||+.|+++
T Consensus 240 -~~~~~~~~-----~~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 -TQVVKGDP-----PQLS--------------NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCCCSCC-----CCCC--------------CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -HHHhcCCC-----CCCC--------------CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00000000 0000 0000123456889999999999999999999987
No 270
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=345.83 Aligned_cols=209 Identities=21% Similarity=0.299 Sum_probs=157.6
Q ss_pred cCCCC-CCeeeeecceEEEEEEEC--CCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSS-SNMVGQGSFGTVFKGIIG--ENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
+.|.+ .++||+|+||+||+|++. .+++.||||++.... ....+.+|+.++++++||||+++++++... ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSH---ADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEET---TTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecC---CCCe
Confidence 34665 568999999999999975 468899999996433 235788999999999999999999997542 3467
Q ss_pred EEEEeecccCCCHHHHHhhCCCc---ccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDK---LEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL----DHDMV 703 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~ 703 (869)
.++||||+++ +|.+++...... .....+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 8999999964 888887643211 1122489999999999999999999999 99999999999999 67789
Q ss_pred EEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCC-CCCccccchhhhHHHHHHHcCCCCCCcC
Q 002897 704 AHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGS-EASMTGDVYSFGILLLEMFSRRRPTDSM 776 (869)
Q Consensus 704 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~il~el~tg~~pf~~~ 776 (869)
+||+|||+|+....... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC---------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999987654321 11223446789999999998874 5899999999999999999999999754
No 271
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=339.48 Aligned_cols=264 Identities=21% Similarity=0.286 Sum_probs=197.8
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 629 (869)
..++|++.+.||+|+||.||+|.+.. .||+|+++... ....+.+.+|+.++++++||||+++++++... .
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 102 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-----P 102 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS-----S
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-----C
Confidence 45789999999999999999999853 49999986432 23345678899999999999999999997653 6
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++ ++.+||+||
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Df 173 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDF 173 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCC-----CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCC
T ss_pred ceEEEeecccCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeec
Confidence 78999999999999999987543 389999999999999999999999 999999999999998 679999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCC---------CCCCccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG---------SEASMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
|++.......... .........|++.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 174 g~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~- 249 (319)
T 2y4i_B 174 GLFSISGVLQAGR---REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE- 249 (319)
T ss_dssp SCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-
T ss_pred CCccccccccccc---cccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 9987654322110 1122334568999999998764 45788999999999999999999999753221
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHh
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREA 860 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~ 860 (869)
................ ..++..+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 250 ----~~~~~~~~~~~~~~~~----------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 250 ----AIIWQMGTGMKPNLSQ----------------------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp ----HHHHHHHTTCCCCCCC----------------------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred ----HHHHHhccCCCCCCCc----------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1111110000000000 01233577999999999999999999999999988766
Q ss_pred hh
Q 002897 861 FV 862 (869)
Q Consensus 861 ~~ 862 (869)
..
T Consensus 304 ~~ 305 (319)
T 2y4i_B 304 NR 305 (319)
T ss_dssp --
T ss_pred hc
Confidence 43
No 272
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.9e-37 Score=341.21 Aligned_cols=280 Identities=16% Similarity=0.229 Sum_probs=202.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-----------CCccceEEEEee
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-----------HRNLIKIITICS 621 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 621 (869)
.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 36899999999999999999999989999999999643 233467889999998885 899999999987
Q ss_pred ccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--
Q 002897 622 SIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-- 699 (869)
Q Consensus 622 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-- 699 (869)
... .+....++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEH----RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhc----cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 542 2234789999999 8899999987543 24899999999999999999999953 899999999999994
Q ss_pred ----CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 700 ----HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 700 ----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CCCcCcceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4458999999999865432 2234689999999999999999999999999999999999999975
Q ss_pred CccCCc-----hHHHhhhhhc--ccccc-------cccCcc-chhhhhhcc-cc---cCCCccchHHHHHHHHHHHHhhc
Q 002897 776 MFHEGL-----TLHEFSKMVL--PEKVM-------EIVDPS-LLLEVRANN-SM---SRGGERVKIEECLVAVIRIGVVC 836 (869)
Q Consensus 776 ~~~~~~-----~~~~~~~~~~--~~~~~-------~~~d~~-~~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~li~~c 836 (869)
...... .........- +.... ..++.. ......... +. ........+..++..+.+++.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 317 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPM 317 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHH
Confidence 432110 1111111000 00000 000000 000000000 00 00000112246778899999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 002897 837 SMESPTDRMQMRDVVV 852 (869)
Q Consensus 837 l~~dP~~RPs~~evl~ 852 (869)
|+.||++|||++|+++
T Consensus 318 L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 318 LQLDPRKRADAGGLVN 333 (373)
T ss_dssp GCSSTTTCBCHHHHHT
T ss_pred hccCccccCCHHHHhh
Confidence 9999999999999987
No 273
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=336.46 Aligned_cols=246 Identities=23% Similarity=0.331 Sum_probs=192.0
Q ss_pred HHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc------hhhHHHHHHHHHHHhC----CCCccceEE
Q 002897 548 KLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK------GALKSFLTECEALRSI----RHRNLIKII 617 (869)
Q Consensus 548 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~ 617 (869)
+.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 344556789999999999999999999998999999999964432 1223456799999988 899999999
Q ss_pred EEeeccccCCCceEEEEeec-ccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 002897 618 TICSSIDFNGVDFKAIVYDF-MQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNV 696 (869)
Q Consensus 618 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 696 (869)
+++.. .+..++|||| +.+++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 105 ~~~~~-----~~~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 170 (312)
T 2iwi_A 105 DWFET-----QEGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENI 170 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGE
T ss_pred EEEec-----CCeEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhE
Confidence 99654 3678999999 78999999998754 389999999999999999999999 999999999999
Q ss_pred eec-CCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCC-ccccchhhhHHHHHHHcCCCCCC
Q 002897 697 LLD-HDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEAS-MTGDVYSFGILLLEMFSRRRPTD 774 (869)
Q Consensus 697 ll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~il~el~tg~~pf~ 774 (869)
+++ .++.+||+|||.+....... .....|+..|+|||++.+..+. .++|||||||++|+|++|+.||.
T Consensus 171 l~~~~~~~~kl~dfg~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 240 (312)
T 2iwi_A 171 LIDLRRGCAKLIDFGSGALLHDEP----------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240 (312)
T ss_dssp EEETTTTEEEECCCSSCEECCSSC----------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred EEeCCCCeEEEEEcchhhhcccCc----------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence 999 88999999999998765432 2334689999999998776664 58999999999999999999996
Q ss_pred cCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 775 SMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ....... . ....++..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~-------~~~~~~~----------~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 241 RDQ-------EILEAEL----------H------------------FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp SHH-------HHHHTCC----------C------------------CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ChH-------HHhhhcc----------C------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 421 1110000 0 00123346789999999999999999999987
No 274
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.1e-37 Score=338.30 Aligned_cols=335 Identities=18% Similarity=0.205 Sum_probs=204.6
Q ss_pred CCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEE
Q 002897 69 LRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELL 148 (869)
Q Consensus 69 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 148 (869)
+++|+.|++++|.+....+..|.++++|++|+|++|.+. .++...|..+++|++|++++|.+++..|..|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc-ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 456667777777666554445566666666666666665 4443444445555555555555444444444444444444
Q ss_pred EccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEE
Q 002897 149 ELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTID 228 (869)
Q Consensus 149 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~ 228 (869)
+|++|+++.+.+..|..+++|++|++++| ++++..+..+..+++ |++|+
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n------------------------------~l~~~~~~~~~~l~~-L~~L~ 171 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNN------------------------------NLERIEDDTFQATTS-LQNLQ 171 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSS------------------------------CCCBCCTTTTSSCTT-CCEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCC------------------------------ccCccChhhccCCCC-CCEEE
Confidence 44444444444433444444444444444 444433333443333 44444
Q ss_pred ecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccc
Q 002897 229 IGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQG 308 (869)
Q Consensus 229 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 308 (869)
+++|.+++. .+..+++|+.|++++|.+.+ +...++|++|++++|.+... |.. ..++|+.|++++|++++
T Consensus 172 l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~ 240 (390)
T 3o6n_A 172 LSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTD 240 (390)
T ss_dssp CCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCC
T ss_pred CCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcc
Confidence 444444422 13344555555555555542 12234566666666666543 221 13456666666666653
Q ss_pred cCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCcccc
Q 002897 309 KIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLS 388 (869)
Q Consensus 309 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 388 (869)
. ..+..+++|++|++++|+++ +..|..|.++++|++|+|++|+++ .+|..+.
T Consensus 241 ~--~~l~~l~~L~~L~Ls~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~ 292 (390)
T 3o6n_A 241 T--AWLLNYPGLVEVDLSYNELE-------------------------KIMYHPFVKMQRLERLYISNNRLV-ALNLYGQ 292 (390)
T ss_dssp C--GGGGGCTTCSEEECCSSCCC-------------------------EEESGGGTTCSSCCEEECCSSCCC-EEECSSS
T ss_pred c--HHHcCCCCccEEECCCCcCC-------------------------CcChhHccccccCCEEECCCCcCc-ccCcccC
Confidence 2 45666666666666666555 345677788888888999988888 4566677
Q ss_pred CCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCcccc
Q 002897 389 ACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFS 468 (869)
Q Consensus 389 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~ 468 (869)
.+++|++|++++|+++ .+|..+..+++|+.|+|++|++++ +| +..+++|+.|++++|++++.... ..+..+....
T Consensus 293 ~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~ 367 (390)
T 3o6n_A 293 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPA 367 (390)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTT
T ss_pred CCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhc
Confidence 8889999999999998 677788889999999999999984 44 67788999999999999875432 2355566666
Q ss_pred ccCCcccCCCC
Q 002897 469 LSGNGKLCGGL 479 (869)
Q Consensus 469 ~~~n~~~c~~~ 479 (869)
+.+++..|..+
T Consensus 368 ~~~~~~~c~~~ 378 (390)
T 3o6n_A 368 VDDADQHCKID 378 (390)
T ss_dssp BCCCCSCCCTT
T ss_pred ccccCceeccc
Confidence 77888888753
No 275
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-36 Score=331.21 Aligned_cols=273 Identities=20% Similarity=0.289 Sum_probs=199.3
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCC-eEEEEEEeecccchhhHHHHHHHHHHHhCCCCc------cceEEEEeecccc
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENG-MLVAVKVLNLMQKGALKSFLTECEALRSIRHRN------LIKIITICSSIDF 625 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~ 625 (869)
.++|++.+.||+|+||+||+|.+..++ +.||+|+++... ...+.+.+|+.+++.++|++ ++.+.+++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~-- 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-- 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET--
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC--
Confidence 468999999999999999999997666 799999996432 34467888999999987655 88888886543
Q ss_pred CCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-------
Q 002897 626 NGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLL------- 698 (869)
Q Consensus 626 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll------- 698 (869)
...++||||+ ++++.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 95 ---~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 95 ---GHMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ---TEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred ---CeEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 6899999999 6677777766542 2489999999999999999999999 99999999999999
Q ss_pred ------------cCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHH
Q 002897 699 ------------DHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEM 766 (869)
Q Consensus 699 ------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el 766 (869)
+.++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEY 232 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHH
Confidence 56789999999999864332 2335689999999999999999999999999999999
Q ss_pred HcCCCCCCcCccCCchHHHhhhhh--ccccccc-ccCccc-------h------hh-hhhcccccCCCccchHHHHHHHH
Q 002897 767 FSRRRPTDSMFHEGLTLHEFSKMV--LPEKVME-IVDPSL-------L------LE-VRANNSMSRGGERVKIEECLVAV 829 (869)
Q Consensus 767 ~tg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~-~~d~~~-------~------~~-~~~~~~~~~~~~~~~~~~~~~~l 829 (869)
++|+.||....... ......... .+..... ...... + .. ...... ............+..+
T Consensus 233 ~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 310 (355)
T 2eu9_A 233 YRGFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK-PLKSYMLQDSLEHVQL 310 (355)
T ss_dssp HHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCC-CGGGGCSCCSHHHHHH
T ss_pred HhCCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCC-cccccccccchhHHHH
Confidence 99999997532211 111111100 0000000 000000 0 00 000000 0000001112345678
Q ss_pred HHHHhhccCCCCCCCCCHHHHHH
Q 002897 830 IRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 830 ~~li~~cl~~dP~~RPs~~evl~ 852 (869)
.+++.+||+.||++|||++|+++
T Consensus 311 ~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 311 FDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHhcCChhhCcCHHHHhc
Confidence 99999999999999999999985
No 276
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.4e-37 Score=352.18 Aligned_cols=286 Identities=21% Similarity=0.279 Sum_probs=207.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccc-cCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSID-FNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~ 630 (869)
.++|++.++||+|+||+||+|.+..+|+.||||+++.. .....+.+.+|++++++++||||+++++++.... +.....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999999989999999998653 3444577899999999999999999999875521 233577
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMV---AHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~ 707 (869)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 8999999999999999987543 12488899999999999999999999 9999999999999997764 9999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||.+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ....|.
T Consensus 167 DFG~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~ 233 (676)
T 3qa8_A 167 DLGYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWH 233 (676)
T ss_dssp SCCCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSS
T ss_pred cccccccccccc---------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhh
Confidence 999998765432 2234578999999999999999999999999999999999999996531 111221
Q ss_pred hhhcccccc-cccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHH-----HHHHHHHHHH
Q 002897 788 KMVLPEKVM-EIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRD-----VVVKLCAARE 859 (869)
Q Consensus 788 ~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~ 859 (869)
......... ........+....... ...........+..+.+++.+||++||++|||++| ..+.+..+..
T Consensus 234 ~~i~~~~~~~~~~~~~l~g~~~~~~~--lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 234 GKVREKSNEHIVVYDDLTGAVKFSSV--LPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp TTCC------CCSCCCCSSSCCCCSS--SCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhcccchhhhhhhhhccccccccc--cCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 111111000 0000001000000000 00011122345678899999999999999999988 4455555543
No 277
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4e-38 Score=338.03 Aligned_cols=242 Identities=20% Similarity=0.296 Sum_probs=198.4
Q ss_pred HhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccch------hhHHHHHHHHHHHhCC--CCccceEEEEeecc
Q 002897 552 ATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKG------ALKSFLTECEALRSIR--HRNLIKIITICSSI 623 (869)
Q Consensus 552 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~ 623 (869)
..++|++.+.||+|+||.||+|++..+++.||||+++..... ....+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 457899999999999999999999999999999999654321 2345678999999996 59999999997653
Q ss_pred ccCCCceEEEEeecccC-CCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CC
Q 002897 624 DFNGVDFKAIVYDFMQN-GSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLD-HD 701 (869)
Q Consensus 624 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~ 701 (869)
+..++||||+.+ ++|.+++.... .+++..++.++.|+++||+|||+. +|+||||||+||+++ .+
T Consensus 121 -----~~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 121 -----DSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp -----SEEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred -----CcEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 778999999976 89999998754 389999999999999999999999 999999999999999 78
Q ss_pred CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCC-CccccchhhhHHHHHHHcCCCCCCcCccCC
Q 002897 702 MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEA-SMTGDVYSFGILLLEMFSRRRPTDSMFHEG 780 (869)
Q Consensus 702 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~il~el~tg~~pf~~~~~~~ 780 (869)
+.+||+|||.++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 187 ~~~kL~Dfg~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--- 253 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTV----------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--- 253 (320)
T ss_dssp TEEEECCCTTCEECCSSC----------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred CCEEEeeCcccccccccc----------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---
Confidence 899999999998765422 223468999999999877665 688999999999999999999996421
Q ss_pred chHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 781 LTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... ... ..++..+.+++.+||+.||++|||++|+++
T Consensus 254 ----~~~~~~~------~~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 ----EIIRGQV------FFR----------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ----HHHHCCC------CCS----------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----hhhcccc------ccc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110000 000 012346789999999999999999999986
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-36 Score=333.95 Aligned_cols=311 Identities=17% Similarity=0.191 Sum_probs=198.1
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+.++++|++++|.++.+.+..|..+++|++|+|++|+|+...+..|+.+++|++|+|++|++++..|..|.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46778888888888875555557778888888888888877767778888888888888888887777777788888888
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHL 179 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 179 (869)
+|++|++. .+|...|.++++|++|++++|.+++..+..|.++++|++|++++|+++++ .+..+++|+.|++++|.+
T Consensus 123 ~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 123 VLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred ECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 88888776 66666666666666666666666666566666666666666666666543 244455566666666655
Q ss_pred CCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcce
Q 002897 180 GNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLI 259 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 259 (869)
+.+ ...++|++|++++|+++. . |.. ..++|+.|++++|.+.
T Consensus 199 ~~~-----------~~~~~L~~L~l~~n~l~~-------------------------~-~~~--~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 199 STL-----------AIPIAVEELDASHNSINV-------------------------V-RGP--VNVELTILKLQHNNLT 239 (390)
T ss_dssp SEE-----------ECCSSCSEEECCSSCCCE-------------------------E-ECC--CCSSCCEEECCSSCCC
T ss_pred ccc-----------CCCCcceEEECCCCeeee-------------------------c-ccc--ccccccEEECCCCCCc
Confidence 432 222345555555555542 2 111 1245556666666555
Q ss_pred ecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCcccc
Q 002897 260 GTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQIL 339 (869)
Q Consensus 260 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 339 (869)
+. ..+..+++|++|+|++|.+++..|..|.++++|+.|++++|+++ .+|..+..+++|++|++++|+++
T Consensus 240 ~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-------- 308 (390)
T 3o6n_A 240 DT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-------- 308 (390)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC--------
T ss_pred cc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce--------
Confidence 32 35556666666666666666666666666666666666666666 34555566667777777666665
Q ss_pred ccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccC
Q 002897 340 SVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSG 405 (869)
Q Consensus 340 ~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 405 (869)
.+|..+..+++|+.|+|++|.+++ ++ +..+++|+.|++++|++.+
T Consensus 309 ------------------~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 309 ------------------HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ------------------CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEH
T ss_pred ------------------ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccc
Confidence 233344555566666666666663 32 5556666666666666653
No 279
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=330.24 Aligned_cols=252 Identities=19% Similarity=0.242 Sum_probs=179.7
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--hhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--GALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.+.||+|+||.||+|++..+|+.||||++..... ...+.+..+..+++.++||||+++++++... +.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~-----~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN-----TD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----SE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-----Cc
Confidence 4678899999999999999999998999999999975432 2223344555578888999999999997653 68
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
.++||||+ ++.+..+...... .+++..++.++.|+++||+|||+ . +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 89999999 5566666554332 38999999999999999999998 6 8999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccC-----CCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHH
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT-----GSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLH 784 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~ 784 (869)
|.+....... ......|++.|+|||++. ...++.++|||||||++|+|++|+.||...........
T Consensus 170 g~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 240 (318)
T 2dyl_A 170 GISGRLVDDK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT 240 (318)
T ss_dssp TTC-----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred CCchhccCCc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH
Confidence 9997654322 122346899999999984 45688999999999999999999999975322111111
Q ss_pred HhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 785 EFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 785 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
....... ... . ....++..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~----~~~-~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 241 KVLQEEP----PLL-P--------------------GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp HHHHSCC----CCC-C--------------------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHhccCC----CCC-C--------------------ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1111100 000 0 00013456789999999999999999999987
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-36 Score=353.45 Aligned_cols=343 Identities=18% Similarity=0.211 Sum_probs=220.9
Q ss_pred CCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEE
Q 002897 69 LRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELL 148 (869)
Q Consensus 69 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 148 (869)
+++++.|++++|.+..+.+..|.++++|++|+|++|.+. +..+..|..+++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L 104 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE-------------------------EIDTYAFAYAHTIQKL 104 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCC-------------------------EECTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCC-------------------------CCChHHhcCCCCCCEE
Confidence 345555555555555444444455555555555555554 4444455555555566
Q ss_pred EccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEE
Q 002897 149 ELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTID 228 (869)
Q Consensus 149 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~ 228 (869)
+|++|.++++.+..|+++++|++|+|++|.++.++.. .|.++++|++|+|++|.+++..|..+..+++ |+.|+
T Consensus 105 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~ 177 (597)
T 3oja_B 105 YMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRG------IFHNTPKLTTLSMSNNNLERIEDDTFQATTS-LQNLQ 177 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT------TTTTCTTCCEEECCSSCCCBCCTTTTTTCTT-CCEEE
T ss_pred ECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHH------HhccCCCCCEEEeeCCcCCCCChhhhhcCCc-CcEEE
Confidence 6665555555555555555555555555555555432 3455555566666665555555555555543 55555
Q ss_pred ecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccc
Q 002897 229 IGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQG 308 (869)
Q Consensus 229 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 308 (869)
|++|.+++. .+..+++|+.|++++|.+.+ +...++|+.|++++|.++...+.. .++|+.|++++|.+++
T Consensus 178 L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 178 LSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD 246 (597)
T ss_dssp CTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC
T ss_pred CcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC
Confidence 555555532 13445556666666665543 223456667777777666433222 1456666666666653
Q ss_pred cCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCcccc
Q 002897 309 KIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLS 388 (869)
Q Consensus 309 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 388 (869)
+..+..+++|+.|+|++|.++ +..|..|+++++|+.|+|++|.+++ +|..+.
T Consensus 247 --~~~l~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 298 (597)
T 3oja_B 247 --TAWLLNYPGLVEVDLSYNELE-------------------------KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 298 (597)
T ss_dssp --CGGGGGCTTCSEEECCSSCCC-------------------------EEESGGGTTCSSCCEEECTTSCCCE-EECSSS
T ss_pred --ChhhccCCCCCEEECCCCccC-------------------------CCCHHHhcCccCCCEEECCCCCCCC-CCcccc
Confidence 355666666666666666655 4567788888999999999999985 677778
Q ss_pred CCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCccCCCcccc
Q 002897 389 ACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFS 468 (869)
Q Consensus 389 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~ 468 (869)
.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....
T Consensus 299 ~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~ 373 (597)
T 3oja_B 299 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPA 373 (597)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTT
T ss_pred cCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhc
Confidence 8999999999999998 7888889999999999999999854 3 67788999999999999876532 2355666667
Q ss_pred ccCCcccCCCCCCCCCCCC
Q 002897 469 LSGNGKLCGGLDEFHLPSC 487 (869)
Q Consensus 469 ~~~n~~~c~~~~~~~~~~~ 487 (869)
+.++...|+.+.......|
T Consensus 374 ~~~~~~~C~~~~~~~~~~c 392 (597)
T 3oja_B 374 VDDADQHCKIDYQLEHGLC 392 (597)
T ss_dssp BCCCCCCCCTTCEEETTEE
T ss_pred cccccccCCcchhccCCcc
Confidence 8889999987654444444
No 281
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.3e-37 Score=341.29 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=184.8
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceEEE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFKAI 633 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 633 (869)
.|.+.++||+|+||+||.+.. .+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+ ....++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~-----~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETT-----DRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEEC-----SSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEec-----CCeEEE
Confidence 455568899999999987655 48999999998643 235678999999876 89999999998654 378999
Q ss_pred EeecccCCCHHHHHhhCCCcccc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-----------
Q 002897 634 VYDFMQNGSLEEWLHQNNDKLEV-CNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHD----------- 701 (869)
Q Consensus 634 v~e~~~~gsL~~~l~~~~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----------- 701 (869)
||||++ |+|.+++......... ...++..++.++.||+.||+|||+. +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 6999999876532111 1123445678999999999999999 99999999999999754
Q ss_pred --CcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC-------CCCCccccchhhhHHHHHHHc-CCC
Q 002897 702 --MVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG-------SEASMTGDVYSFGILLLEMFS-RRR 771 (869)
Q Consensus 702 --~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~il~el~t-g~~ 771 (869)
+.+||+|||+|+......... ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~ 238 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSF----RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238 (434)
T ss_dssp CSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCC
T ss_pred CceEEEEcccccceecCCCCccc----eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCC
Confidence 489999999998775532110 012234579999999999865 568999999999999999999 999
Q ss_pred CCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 772 PTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 772 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
||....... ........... . .........+.++.+++.+||+.||++|||+.||+
T Consensus 239 Pf~~~~~~~---~~i~~~~~~~~--~-------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil 294 (434)
T 2rio_A 239 PFGDKYSRE---SNIIRGIFSLD--E-------------------MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294 (434)
T ss_dssp TTCSTTTHH---HHHHHTCCCCC--C-------------------CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCchhhH---HHHhcCCCCcc--c-------------------ccccccccchHHHHHHHHHHhhCChhhCCCHHHHH
Confidence 996532211 11111110000 0 00111235667889999999999999999999998
Q ss_pred H
Q 002897 852 V 852 (869)
Q Consensus 852 ~ 852 (869)
+
T Consensus 295 ~ 295 (434)
T 2rio_A 295 R 295 (434)
T ss_dssp T
T ss_pred h
Confidence 6
No 282
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=336.70 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=184.0
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCceE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 631 (869)
..+|.+.++||+|+||+||.... .+|+.||||++..... ..+.+|+++++.+ +||||+++++++.+. ...
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~-----~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDR-----QFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEET-----TEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecC-----CEE
Confidence 35688889999999999664433 4899999999864332 2356899999999 799999999987653 778
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-----CCcEEE
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH-----DMVAHV 706 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl 706 (869)
++||||++ |+|.+++...... .++..++.++.||++||+|||+. +|+||||||+||+++. ...+||
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL 164 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDFA-----HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMI 164 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSCC-----CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEE
T ss_pred EEEEECCC-CCHHHHHHhcCCC-----ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEE
Confidence 99999996 5999999876532 44556789999999999999999 9999999999999953 236889
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccC---CCCCCccccchhhhHHHHHHHc-CCCCCCcCccCCch
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGT---GSEASMTGDVYSFGILLLEMFS-RRRPTDSMFHEGLT 782 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~il~el~t-g~~pf~~~~~~~~~ 782 (869)
+|||+|+........ ........||+.|+|||++. ...++.++|||||||++|||++ |..||......
T Consensus 165 ~DFG~a~~~~~~~~~-----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--- 236 (432)
T 3p23_A 165 SDFGLCKKLAVGRHS-----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--- 236 (432)
T ss_dssp CCTTEEECC-----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred ecccceeeccCCCcc-----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence 999999876543211 12234467999999999987 4567889999999999999999 99998542211
Q ss_pred HHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 002897 783 LHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVV 852 (869)
Q Consensus 783 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 852 (869)
... ............ ........+.+++.+||+.||++|||++||++
T Consensus 237 ~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 237 QAN---ILLGACSLDCLH--------------------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHH---HHTTCCCCTTSC--------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHH---HHhccCCccccC--------------------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 101 010000000000 01133455779999999999999999999984
No 283
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.8e-36 Score=315.41 Aligned_cols=234 Identities=13% Similarity=0.104 Sum_probs=185.1
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
++|++.+.||+|+||.||+|++..+|+.||||++.... ....+.+.+|+.++++++||||+++++++... +.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-----~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR-----AG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-----TE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-----Cc
Confidence 67999999999999999999999889999999997542 33457889999999999999999999997653 67
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.++++.. ....++..++.|++.||+|||++ ||+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 89999999999999999643 35567889999999999999999 99999999999999999999998544
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
. ++ .++.++|||||||++|||+||+.||.......... ......
T Consensus 175 ~----------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~-~~~~~~ 218 (286)
T 3uqc_A 175 T----------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-PAERDT 218 (286)
T ss_dssp C----------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE-ECCBCT
T ss_pred c----------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH-HHHHHh
Confidence 2 22 36889999999999999999999997643221000 000000
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVKLCAAREAF 861 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~ 861 (869)
.. ....+ ......++..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 219 -~~---~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 219 -AG---QPIEP-----------------ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp -TS---CBCCH-----------------HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred -cc---CCCCh-----------------hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00 00000 00111345678899999999999999 9999999999987553
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-35 Score=345.43 Aligned_cols=310 Identities=17% Similarity=0.184 Sum_probs=192.2
Q ss_pred cCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEE
Q 002897 21 LFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIF 100 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 100 (869)
+.+++.|++++|.++.+.+..|.++++|++|+|++|.|++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45666666666666654445566666666666666666666666666666666666666666666666666666666666
Q ss_pred CcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 101 LQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 101 Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
|++|.+. .+|...|.++++|++|++++|.+++..|..|.++++|++|+|++|.++++. +..+++|+.|++++|.++
T Consensus 130 L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 130 LERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred eeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 6666665 555555555555555555555555555555555555555555555544331 333444444555444443
Q ss_pred CCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCccee
Q 002897 181 NRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIG 260 (869)
Q Consensus 181 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 260 (869)
.+ ...++ |+.|++++|.++...+.. .++|+.|+|++|.+.+
T Consensus 206 ~l-----------~~~~~-------------------------L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 206 TL-----------AIPIA-------------------------VEELDASHNSINVVRGPV---NVELTILKLQHNNLTD 246 (597)
T ss_dssp EE-----------ECCTT-------------------------CSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC
T ss_pred cc-----------cCCch-------------------------hheeeccCCccccccccc---CCCCCEEECCCCCCCC
Confidence 21 12233 555555555554322211 2456677777776654
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccc
Q 002897 261 TVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILS 340 (869)
Q Consensus 261 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 340 (869)
+..++.+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++ +|..+..+++|+.|+|++|+++
T Consensus 247 --~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~--------- 314 (597)
T 3oja_B 247 --TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL--------- 314 (597)
T ss_dssp --CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC---------
T ss_pred --ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC---------
Confidence 3566777777777777777777777777777777777777777774 4666667777888777777776
Q ss_pred cccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccC
Q 002897 341 VTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSG 405 (869)
Q Consensus 341 ~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 405 (869)
.+|..+..+++|+.|+|++|.+++. | +..+++|+.|++++|++.+
T Consensus 315 -----------------~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 315 -----------------HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp -----------------CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred -----------------ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 3445566667777777777777743 3 5667788888888888764
No 285
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-36 Score=353.26 Aligned_cols=248 Identities=20% Similarity=0.327 Sum_probs=198.4
Q ss_pred hcCCCCCCeeeeecceEEEEEEECC-CCeEEEEEEeecc-cchhhHHHHHHHHHHHhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGE-NGMLVAVKVLNLM-QKGALKSFLTECEALRSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|++.++||+|+||+||+|.+.. +|+.||||++... .......+.+|++++++++||||+++++++...+..+...
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999999975 7899999998643 3344567899999999999999999999987754333334
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.++||||+++++|.+++.. .+++.+++.++.||++||+|||++ +|+||||||+||+++.+ .+||+|||
T Consensus 159 ~~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eEEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 7999999999999987754 289999999999999999999999 99999999999999875 89999999
Q ss_pred ccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhh
Q 002897 711 LAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMV 790 (869)
Q Consensus 711 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 790 (869)
+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||........
T Consensus 227 ~a~~~~~~------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------- 284 (681)
T 2pzi_A 227 AVSRINSF------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------- 284 (681)
T ss_dssp TCEETTCC------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------
T ss_pred cchhcccC------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc---------
Confidence 99865432 335699999999998765 48899999999999999999988764221100
Q ss_pred cccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHHHHHHHh
Q 002897 791 LPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRM-QMRDVVVKLCAAREA 860 (869)
Q Consensus 791 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~ 860 (869)
+ . .......+..+.+++.+||+.||++|| +++++...+..+.+.
T Consensus 285 -~-------~------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 285 -P-------E------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp -C-------T------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred -c-------c------------------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 0 0 001113345688999999999999999 566777777766544
No 286
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2e-36 Score=335.79 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=182.2
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc---chhhHHHHHHHHHHHhCCC-Cccc---------eEEEE
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ---KGALKSFLTECEALRSIRH-RNLI---------KIITI 619 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv---------~~~~~ 619 (869)
...|...++||+|+||+||+|++..+|+.||||++.... ....+.+.+|+.+++.+.| ++.. ...+.
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 345777889999999999999999999999999987332 2336789999999999977 2211 11111
Q ss_pred ------------eeccccCCCceEEEEeecccCCCHHHHHhhCCC-cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002897 620 ------------CSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNND-KLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPV 686 (869)
Q Consensus 620 ------------~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 686 (869)
............+++|+++ +++|.+++..... ......+++..++.++.||++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1110000123457777766 6799999852210 00012478889999999999999999999 99
Q ss_pred EecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCccc----------CCCCCCccccc
Q 002897 687 VHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYG----------TGSEASMTGDV 756 (869)
Q Consensus 687 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv 756 (869)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv 300 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT 300 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----------cccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence 99999999999999999999999999764332 233467 999999998 55668999999
Q ss_pred hhhhHHHHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhc
Q 002897 757 YSFGILLLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVC 836 (869)
Q Consensus 757 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 836 (869)
|||||++|||++|+.||........ ....... . ..++..+.+++.+|
T Consensus 301 wSlGvil~elltg~~Pf~~~~~~~~-----~~~~~~~------------------------~----~~~~~~~~~li~~~ 347 (413)
T 3dzo_A 301 WTLGLAIYWIWCADLPNTDDAALGG-----SEWIFRS------------------------C----KNIPQPVRALLEGF 347 (413)
T ss_dssp HHHHHHHHHHHHSSCCCCTTGGGSC-----SGGGGSS------------------------C----CCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhh-----HHHHHhh------------------------c----ccCCHHHHHHHHHH
Confidence 9999999999999999975322110 0000000 0 01235688999999
Q ss_pred cCCCCCCCCCHHHHHH
Q 002897 837 SMESPTDRMQMRDVVV 852 (869)
Q Consensus 837 l~~dP~~RPs~~evl~ 852 (869)
|+.||++|||+.|+++
T Consensus 348 l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 348 LRYPKEDRLLPLQAME 363 (413)
T ss_dssp TCSSGGGSCCHHHHTT
T ss_pred ccCChhhCcCHHHHHh
Confidence 9999999999888754
No 287
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.2e-35 Score=313.56 Aligned_cols=237 Identities=20% Similarity=0.294 Sum_probs=182.9
Q ss_pred hcCCCCC-CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHH-HhCCCCccceEEEEeeccccCCCce
Q 002897 553 TSEFSSS-NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEAL-RSIRHRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 553 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 630 (869)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++. ...+.+|++++ +..+||||+++++++... ..+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCce
Confidence 3567776 789999999999999999999999999853 24567888888 556999999999997653 233577
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEc
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDH---DMVAHVG 707 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 707 (869)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTT----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 8999999999999999987643 2489999999999999999999999 9999999999999998 7899999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCcCccCCchHHHhh
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDSMFHEGLTLHEFS 787 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 787 (869)
|||++.... +..++.++||||+||++|||++|+.||.........
T Consensus 163 Dfg~a~~~~------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----- 207 (299)
T 3m2w_A 163 DFGFAKETT------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----- 207 (299)
T ss_dssp CCTTCEECT------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------
T ss_pred ccccccccc------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----
Confidence 999986432 234678999999999999999999999653221100
Q ss_pred hhhcccccccccCccchhhhhhcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 002897 788 KMVLPEKVMEIVDPSLLLEVRANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVVVK 853 (869)
Q Consensus 788 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 853 (869)
.... . ...... ..........++..+.+++.+||+.||++|||+.|+++.
T Consensus 208 ~~~~-~---~~~~~~------------~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 208 PGMK-T---RIRMGQ------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSC-C---SSCTTC------------CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH-H---HHhhcc------------ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000 0 000000 000001112345678899999999999999999999873
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.4e-34 Score=312.98 Aligned_cols=308 Identities=22% Similarity=0.400 Sum_probs=150.7
Q ss_pred ccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcc
Q 002897 41 SIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPN 120 (869)
Q Consensus 41 ~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 120 (869)
.+..+++|++|++++|.+. .+| .++.+++|++|+|++|++++. +. +.++++|++|+|++|.+. .+| .+.++++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~-~~~--~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKIT-DIS--ALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG--GGTTCTT
T ss_pred cchhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCccc-Cch--HHcCCCc
Confidence 3566777888888888777 344 377777888888888877743 33 777777777777777776 333 2444444
Q ss_pred hhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCc
Q 002897 121 LRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLE 200 (869)
Q Consensus 121 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~ 200 (869)
|++|++++|.++...+ +..+++|++|++++|......+ .+. .+++|+
T Consensus 112 L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~------------------------------~l~~L~ 158 (347)
T 4fmz_A 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLS------------------------------NMTGLN 158 (347)
T ss_dssp CSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGT------------------------------TCTTCC
T ss_pred CCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chh------------------------------hCCCCc
Confidence 4444444444443222 4445555555555553322211 244 444444
Q ss_pred EEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCc
Q 002897 201 NLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSN 280 (869)
Q Consensus 201 ~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 280 (869)
+|++++|.+.+..+ +..+++ |+.|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~-L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n 231 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTD-LYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNN 231 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTT-CSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred EEEecCCCcCCchh--hccCCC-CCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCC
Confidence 44444444432211 222222 3333333333331111 3334444444444444432222 344444444444444
Q ss_pred cccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCc
Q 002897 281 FLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLP 360 (869)
Q Consensus 281 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p 360 (869)
.+++..+ +..+++|++|++++|++++ +
T Consensus 232 ~l~~~~~--------------------------~~~l~~L~~L~l~~n~l~~--------------------------~- 258 (347)
T 4fmz_A 232 KITDLSP--------------------------LANLSQLTWLEIGTNQISD--------------------------I- 258 (347)
T ss_dssp CCCCCGG--------------------------GTTCTTCCEEECCSSCCCC--------------------------C-
T ss_pred ccCCCcc--------------------------hhcCCCCCEEECCCCccCC--------------------------C-
Confidence 4443222 4444444444444444431 0
Q ss_pred ccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccc
Q 002897 361 SEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSF 440 (869)
Q Consensus 361 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 440 (869)
+.+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..|..++.+++|+.|+|++|++++..| +..+++
T Consensus 259 ~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 334 (347)
T 4fmz_A 259 NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSK 334 (347)
T ss_dssp GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTT
T ss_pred hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhc
Confidence 1233344444445554444422 234455555555555555554444555555555555555555554433 555555
Q ss_pred cCeeccccccCc
Q 002897 441 LEYLNLSYNHFE 452 (869)
Q Consensus 441 L~~l~l~~N~l~ 452 (869)
|++|++++|+|+
T Consensus 335 L~~L~l~~N~i~ 346 (347)
T 4fmz_A 335 MDSADFANQVIK 346 (347)
T ss_dssp CSEESSSCC---
T ss_pred cceeehhhhccc
Confidence 555555555553
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.7e-34 Score=312.55 Aligned_cols=284 Identities=26% Similarity=0.381 Sum_probs=202.9
Q ss_pred hccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcE
Q 002897 19 CYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEF 98 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 98 (869)
..+++|++|++++|.++ .++ .+..+++|++|++++|+++.. |. |.++++|++|+|++|.++.. +.|.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 36899999999999999 454 499999999999999999954 44 99999999999999999853 47999999999
Q ss_pred EECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc
Q 002897 99 IFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 178 (869)
|++++|.+. .++. +..+++|+.|++++|.....++ .+..+++|++|++++|.+..+.+ +..+++|++|++++|.
T Consensus 115 L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 115 LYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EECcCCccc-Cchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 999999998 6664 8899999999999996664444 59999999999999999887655 8899999999999999
Q ss_pred CCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcc
Q 002897 179 LGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQL 258 (869)
Q Consensus 179 l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 258 (869)
+..++ .+..+++|+.|++++|++++..+ +..+++ |++|++++|.+++..+ +..+++|++|++++|.+
T Consensus 189 l~~~~--------~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~-L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 189 IEDIS--------PLASLTSLHYFTAYVNQITDITP--VANMTR-LNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp CCCCG--------GGGGCTTCCEEECCSSCCCCCGG--GGGCTT-CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred ccccc--------cccCCCccceeecccCCCCCCch--hhcCCc-CCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 87654 26778888888888888875433 455543 6666666666663322 55555555555555555
Q ss_pred eecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccC
Q 002897 259 IGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLD 331 (869)
Q Consensus 259 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (869)
.+. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|++++..+..+..+++|++|++++|+++
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 432 2345555555555555555432 22344444444444444444333344444444444444444433
No 290
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-35 Score=315.75 Aligned_cols=255 Identities=30% Similarity=0.524 Sum_probs=185.4
Q ss_pred ceEEEecCCcccc--cCCccccCCCCCCeeeccc-CcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCcccccee
Q 002897 224 MTTIDIGGNYFSG--TIPPGLGNLVHLNSIAMEG-NQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLA 300 (869)
Q Consensus 224 L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 300 (869)
++.|+|++|.+++ .+|..|.++++|++|++++ |.+.+.+|..|+.+++|++|+|++|.+++..|..|.++++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 4555555555554 4555555555555555553 555555555555555555555555555555555555555555555
Q ss_pred cccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccccccccccc
Q 002897 301 LEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFS 380 (869)
Q Consensus 301 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 380 (869)
+++|++++.+|..|..+++|++|++++|++++.+|..+......++.|++++|++++.+|..+..++ |+.|+|++|.++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 5555555555555555566666666666655555555555544555666666666667788888887 999999999999
Q ss_pred ccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCCCCCc
Q 002897 381 GDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKGV 460 (869)
Q Consensus 381 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 460 (869)
+..|..|..+++|+.|++++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..+.
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 88899999999999999999999866555 88889999999999999999999999999999999999999999998888
Q ss_pred cCCCccccccCCcccCCCCC
Q 002897 461 FSNKTRFSLSGNGKLCGGLD 480 (869)
Q Consensus 461 ~~~~~~~~~~~n~~~c~~~~ 480 (869)
+++++.+.+.+|+++||.+.
T Consensus 290 l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp GGGSCGGGTCSSSEEESTTS
T ss_pred ccccChHHhcCCCCccCCCC
Confidence 89999999999999999654
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.3e-34 Score=310.58 Aligned_cols=305 Identities=18% Similarity=0.241 Sum_probs=234.4
Q ss_pred CCCcccccCChhhhhcc-----CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 5 QNNKLVGDIPVEIGCYL-----FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 5 ~~~~~~~~ip~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
..+.++ ++|..+.... .+++.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++
T Consensus 12 ~~~~l~-~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~ 87 (332)
T 2ft3_A 12 GIPDLD-SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVN 87 (332)
T ss_dssp --------------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCccc-cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCC
Confidence 445566 7887654322 37999999999999 6777663 7999999999999988888999999999999999
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccc--
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIG-- 157 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~-- 157 (869)
|++++..|..|.++++|++|+|++|++. .+|...+ ++|++|++++|.++...+..|.++++|++|++++|.++.
T Consensus 88 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 163 (332)
T 2ft3_A 88 NKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSG 163 (332)
T ss_dssp SCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGG
T ss_pred CccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCC
Confidence 9999888999999999999999999998 7886544 788889999999987777788889999999999998853
Q ss_pred ccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccccc
Q 002897 158 KMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGT 237 (869)
Q Consensus 158 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 237 (869)
..+..|..+ +|++|++++|.++.++.. + .++|++|++++|++++..+..+..+++ |+.|++++|.+++.
T Consensus 164 ~~~~~~~~l-~L~~L~l~~n~l~~l~~~-------~--~~~L~~L~l~~n~i~~~~~~~l~~l~~-L~~L~L~~N~l~~~ 232 (332)
T 2ft3_A 164 FEPGAFDGL-KLNYLRISEAKLTGIPKD-------L--PETLNELHLDHNKIQAIELEDLLRYSK-LYRLGLGHNQIRMI 232 (332)
T ss_dssp SCTTSSCSC-CCSCCBCCSSBCSSCCSS-------S--CSSCSCCBCCSSCCCCCCTTSSTTCTT-CSCCBCCSSCCCCC
T ss_pred CCcccccCC-ccCEEECcCCCCCccCcc-------c--cCCCCEEECCCCcCCccCHHHhcCCCC-CCEEECCCCcCCcC
Confidence 667778877 888888888888877653 1 267888888888888777777777765 88888888888877
Q ss_pred CCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCC------ccccceeccccccc--cc
Q 002897 238 IPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNL------TMLTLLALEINNLQ--GK 309 (869)
Q Consensus 238 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~n~l~--~~ 309 (869)
.+..+..+++|+.|++++|++. .+|..+..+++|++|++++|++++..+..|... ..|+.|++++|.+. ..
T Consensus 233 ~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 233 ENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp CTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGS
T ss_pred ChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccccc
Confidence 7777888888888888888887 667777788888888888888887766666553 56777888888776 45
Q ss_pred CCcCccCccccceeeccCcc
Q 002897 310 IPSSLGNCTSLIMLTLSKNK 329 (869)
Q Consensus 310 ~~~~~~~l~~L~~L~l~~N~ 329 (869)
.|.+|..+++|+.|++++|+
T Consensus 312 ~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGGTTBCCSTTEEC----
T ss_pred Ccccccccchhhhhhccccc
Confidence 66777778888888877764
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-33 Score=303.99 Aligned_cols=291 Identities=20% Similarity=0.268 Sum_probs=234.4
Q ss_pred cCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEE
Q 002897 21 LFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIF 100 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 100 (869)
..+++.++++++.++ .+|..+. ++|++|+|++|+|++..+..|+++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 347899999999998 6776664 6899999999999988778899999999999999999988899999999999999
Q ss_pred CcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccc--ccCcCccCCCCCCEEEccCcc
Q 002897 101 LQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIG--KMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 101 Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~l~~n~ 178 (869)
|++|++. .+|...+ ++|++|++++|.+++..+..|.++++|++|++++|.+.. ..+..|..+++|++|++++|.
T Consensus 107 Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp CCSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CCCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 9999998 7886544 788888999999888877888889999999999998854 667778888888888888888
Q ss_pred CCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcc
Q 002897 179 LGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQL 258 (869)
Q Consensus 179 l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 258 (869)
++.++.. + .++|++|++++|++++..|..+..+++ |+.|++++|.+++..+..+..+++|++|++++|++
T Consensus 183 l~~l~~~-------~--~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 252 (330)
T 1xku_A 183 ITTIPQG-------L--PPSLTELHLDGNKITKVDAASLKGLNN-LAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252 (330)
T ss_dssp CCSCCSS-------C--CTTCSEEECTTSCCCEECTGGGTTCTT-CCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred cccCCcc-------c--cccCCEEECCCCcCCccCHHHhcCCCC-CCEEECCCCcCceeChhhccCCCCCCEEECCCCcC
Confidence 8877653 1 267888888888888777777877775 88888888888877777788888888888888888
Q ss_pred eecCCccccCCCCCCEEEccCccccCcCCCCCCCC------ccccceecccccccc--cCCcCccCccccceeeccCcc
Q 002897 259 IGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNL------TMLTLLALEINNLQG--KIPSSLGNCTSLIMLTLSKNK 329 (869)
Q Consensus 259 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~ 329 (869)
. .+|..+..+++|++|++++|+|++..+..|... +.|+.|++++|.+.. ..|..|..+++|+.+++++|+
T Consensus 253 ~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 253 V-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp S-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred c-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 7 677778888888888888888887766666543 567777888887752 455677777777777777774
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5e-33 Score=299.98 Aligned_cols=285 Identities=18% Similarity=0.208 Sum_probs=252.7
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++++++ .+|..++ ++++.|+|++|+|+++.+..|.++++|++|+|++|++++..|..|+++++|++|+|++|+
T Consensus 36 l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 36 VQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 688999999 8998775 689999999999998888899999999999999999998889999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccce--eccccccCCCCCcEEEccCCcccccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTG--FLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~--~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
++ .+|..+. ++|++|++++|++. .++...|.++++|+.|++++|.++. ..+..|.++++|++|++++|.++.+.
T Consensus 112 l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~ 187 (330)
T 1xku_A 112 LK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIP 187 (330)
T ss_dssp CS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCC
T ss_pred CC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCC
Confidence 99 4565554 79999999999998 7888889999999999999999964 77889999999999999999998765
Q ss_pred CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCC
Q 002897 160 SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIP 239 (869)
Q Consensus 160 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 239 (869)
...+ ++|++|++++|.++.+... .|..+++|++|++++|++++..+..+..+++ |+.|+|++|.++ .+|
T Consensus 188 ~~~~---~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~-~lp 256 (330)
T 1xku_A 188 QGLP---PSLTELHLDGNKITKVDAA------SLKGLNNLAKLGLSFNSISAVDNGSLANTPH-LRELHLNNNKLV-KVP 256 (330)
T ss_dssp SSCC---TTCSEEECTTSCCCEECTG------GGTTCTTCCEEECCSSCCCEECTTTGGGSTT-CCEEECCSSCCS-SCC
T ss_pred cccc---ccCCEEECCCCcCCccCHH------HhcCCCCCCEEECCCCcCceeChhhccCCCC-CCEEECCCCcCc-cCC
Confidence 4433 8999999999999987643 6889999999999999999888888988886 999999999999 788
Q ss_pred ccccCCCCCCeeecccCcceecCCccccC------CCCCCEEEccCccccC--cCCCCCCCCccccceeccccc
Q 002897 240 PGLGNLVHLNSIAMEGNQLIGTVPPEIGW------LKNLQSLYLNSNFLHG--YIPSSLGNLTMLTLLALEINN 305 (869)
Q Consensus 240 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~ 305 (869)
.++..+++|++|++++|++.+..+..|.. .+.|+.|++++|.+.. +.|..|..+..++.+++++|+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 89999999999999999999887777754 3789999999999864 667889999999999999985
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.8e-33 Score=303.65 Aligned_cols=284 Identities=22% Similarity=0.273 Sum_probs=253.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++++++ ++|..++ ++|++|+|++|.|+++.|.+|.++++|++|+|++|+|++..|.+|+++++|++|+|++|+
T Consensus 38 l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 113 (332)
T 2ft3_A 38 VQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNH 113 (332)
T ss_dssp EECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSC
T ss_pred EECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCc
Confidence 688999999 9999875 699999999999998888899999999999999999998889999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccc--eeccccccCCCCCcEEEccCCcccccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLT--GFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~--~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
++ .+|..+. ++|++|++++|++. .+|...|.++++|+.|++++|.++ +..+..+..+ +|++|++++|+++++.
T Consensus 114 l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 114 LV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp CC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred CC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC
Confidence 99 5565554 89999999999998 788888999999999999999996 3778888888 9999999999998765
Q ss_pred CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCC
Q 002897 160 SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIP 239 (869)
Q Consensus 160 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 239 (869)
...+ ++|++|++++|.++.++.. .+..+++|++|++++|++++..+..+..+++ |+.|++++|.++ .+|
T Consensus 189 ~~~~---~~L~~L~l~~n~i~~~~~~------~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~-~lp 257 (332)
T 2ft3_A 189 KDLP---ETLNELHLDHNKIQAIELE------DLLRYSKLYRLGLGHNQIRMIENGSLSFLPT-LRELHLDNNKLS-RVP 257 (332)
T ss_dssp SSSC---SSCSCCBCCSSCCCCCCTT------SSTTCTTCSCCBCCSSCCCCCCTTGGGGCTT-CCEEECCSSCCC-BCC
T ss_pred cccc---CCCCEEECCCCcCCccCHH------HhcCCCCCCEEECCCCcCCcCChhHhhCCCC-CCEEECCCCcCe-ecC
Confidence 4333 7899999999999988754 5889999999999999999888888998886 999999999999 788
Q ss_pred ccccCCCCCCeeecccCcceecCCccccCC------CCCCEEEccCcccc--CcCCCCCCCCccccceeccccc
Q 002897 240 PGLGNLVHLNSIAMEGNQLIGTVPPEIGWL------KNLQSLYLNSNFLH--GYIPSSLGNLTMLTLLALEINN 305 (869)
Q Consensus 240 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~l~~n~ 305 (869)
..+..+++|+.|++++|++++..+..|... ++|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 258 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 889999999999999999998877777653 67999999999988 6788889999999999999885
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.2e-34 Score=311.41 Aligned_cols=247 Identities=18% Similarity=0.210 Sum_probs=187.6
Q ss_pred hcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCC---------CCccce
Q 002897 553 TSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIR---------HRNLIK 615 (869)
Q Consensus 553 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 615 (869)
.++|++.+.||+|+||+||+|++ +|+.||||+++... ....+.+.+|+.+++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 78999999997542 223477889999998885 888888
Q ss_pred EEEEeecc-------------------------ccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHH
Q 002897 616 IITICSSI-------------------------DFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAID 670 (869)
Q Consensus 616 ~~~~~~~~-------------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~ 670 (869)
+.+++... ++.+....++||||+++|++.+.+... .+++..++.++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-------~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-------LSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-------CCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-------CCCHHHHHHHHHH
Confidence 87764311 012357899999999999777666442 3899999999999
Q ss_pred HHHHHHHHH-hcCCCCeEecCCCCCceeecCCC--------------------cEEEccccccccCCCCCCCCccccCCC
Q 002897 671 VASAIEYLH-HHCKPPVVHGDLKPSNVLLDHDM--------------------VAHVGDFGLAKFLPARPLDTVVETPSS 729 (869)
Q Consensus 671 i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 729 (869)
|+.||+||| +. +|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----------- 235 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----------- 235 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----------
Confidence 999999999 89 999999999999999887 8999999999865431
Q ss_pred CCCccCcccccCCcccCCCCCCccccchhhhHH-HHHHHcCCCCCCcCccCCchHHHhhhhhcccccccccCccchhhhh
Q 002897 730 SSGIKGTVGYIAPEYGTGSEASMTGDVYSFGIL-LLEMFSRRRPTDSMFHEGLTLHEFSKMVLPEKVMEIVDPSLLLEVR 808 (869)
Q Consensus 730 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~i-l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 808 (869)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||..... ............
T Consensus 236 --~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~-------------- 294 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW----LHYLTDKMLKQM-------------- 294 (336)
T ss_dssp --EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH----HHHHHHHHHHTC--------------
T ss_pred --cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh----hhHHHHhhhhhh--------------
Confidence 246999999999998766 889999998777 7888999999843100 000000000000
Q ss_pred hcccccCCCccchHHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 002897 809 ANNSMSRGGERVKIEECLVAVIRIGVVCSMESPTDRMQMRDVV 851 (869)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 851 (869)
..............++++.+++.+||+.| |++|++
T Consensus 295 ---~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 295 ---TFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp ---CCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ---ccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 00001112234567888999999999976 999987
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.6e-34 Score=302.23 Aligned_cols=253 Identities=29% Similarity=0.500 Sum_probs=216.9
Q ss_pred CCCcEEEccCCCCCC--CCChhhhhccccceEEEecC-CcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCC
Q 002897 197 SKLENLGLYDNQFGG--LLPHSLANLSNTMTTIDIGG-NYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQ 273 (869)
Q Consensus 197 ~~L~~L~L~~n~l~~--~~~~~~~~l~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 273 (869)
.++++|+|++|++++ .+|..+..++. |++|++++ |.+.+.+|..|.++++|++|++++|++.+..|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~-L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPY-LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTT-CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCC-CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 467778888888877 77777877775 88888884 778777888888888888888888888878888888888888
Q ss_pred EEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcc-ccceeeccCcccCCCCCccccccccccceecccC
Q 002897 274 SLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCT-SLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSD 352 (869)
Q Consensus 274 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~ 352 (869)
+|+|++|.+++..|..+.++++|++|++++|++++.+|..+..++ +|+.|++++|++++.+|..+.... ++.|++++
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--L~~L~Ls~ 206 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSR 206 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC--CSEEECCS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc--ccEEECcC
Confidence 888888888878888888888888888888888877888888887 888888888888877777776664 77888888
Q ss_pred CcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCc
Q 002897 353 NLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIP 432 (869)
Q Consensus 353 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 432 (869)
|.+++..|..|..+++|+.|+|++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|+.|+|++|+++|.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 888888999999999999999999999976665 8899999999999999999999999999999999999999999999
Q ss_pred cccccccccCeecccccc-Cccc
Q 002897 433 KYLENLSFLEYLNLSYNH-FEGE 454 (869)
Q Consensus 433 ~~~~~l~~L~~l~l~~N~-l~~~ 454 (869)
.. .++++|+.+++++|+ +.|.
T Consensus 286 ~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CS-TTGGGSCGGGTCSSSEEEST
T ss_pred CC-ccccccChHHhcCCCCccCC
Confidence 86 889999999999999 5553
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.7e-37 Score=349.22 Aligned_cols=364 Identities=19% Similarity=0.176 Sum_probs=194.2
Q ss_pred CCcCEEeccCCcCccccCcc-cccCcCCCEEEccCCccCc----cCCccccCCCCCCEEeCcCcccCccCCcccc-cCC-
Q 002897 22 FKLENLSLAENHLTGQLPVS-IGNLSALQVIDIRGNRLGG----KIPDTLGQLRKLIYLNIGRNQFSGFIPPSIY-NIS- 94 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~- 94 (869)
++|+.|+|++|+++...... |..+++|++|+|++|+++. .++..+..+++|++|+|++|.+....+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56888888888887544333 7788888888888888874 3466677788888888888888754443333 344
Q ss_pred ---CCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCc-----cCC
Q 002897 95 ---SFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINF-----NSL 166 (869)
Q Consensus 95 ---~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~-----~~l 166 (869)
+|++|+|++|++.. ... ..++..+..+++|++|+|++|.+....+..+ ...
T Consensus 83 ~~~~L~~L~L~~n~i~~-~~~--------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTG-AGC--------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp TTCCCCEEECTTSCCBG-GGH--------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred CCCceeEEEccCCCCCH-HHH--------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 57788888777752 110 1234455555666666666666543322221 224
Q ss_pred CCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhc----cccceEEEecCCccccc----C
Q 002897 167 KNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANL----SNTMTTIDIGGNYFSGT----I 238 (869)
Q Consensus 167 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l----~~~L~~L~l~~n~l~~~----~ 238 (869)
++|++|++++|.++..... .++..+..+++|++|++++|.++...+..+... ...|+.|++++|.+++. +
T Consensus 142 ~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 219 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCE--PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDL 219 (461)
T ss_dssp CCCCEEECTTSCCBGGGHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHH
T ss_pred CcceEEECCCCCCCHHHHH--HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHH
Confidence 4566666666655543321 223345556666666666666654333333221 11355555555555532 2
Q ss_pred CccccCCCCCCeeecccCcceecC-----CccccCCCCCCEEEccCccccCc----CCCCCCCCccccceeccccccccc
Q 002897 239 PPGLGNLVHLNSIAMEGNQLIGTV-----PPEIGWLKNLQSLYLNSNFLHGY----IPSSLGNLTMLTLLALEINNLQGK 309 (869)
Q Consensus 239 ~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~ 309 (869)
+..+..+++|++|++++|.+.... +..+..+++|++|++++|.++.. ++..+.++++|+.|++++|+++..
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 344445555555555555544321 11222345555555555555432 233333344444444444444322
Q ss_pred CCcCccCc-----cccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCC
Q 002897 310 IPSSLGNC-----TSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIP 384 (869)
Q Consensus 310 ~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 384 (869)
.+..+... ++|++|++++|.+++... ..++..+..+++|++|+|++|.+++..+
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~---------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACC---------------------SHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGH---------------------HHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHH---------------------HHHHHHHhhCCCccEEEccCCccccccH
Confidence 22222211 344444444444431100 0133445555666666666666654433
Q ss_pred ccccC-----CCCCcEEEeeCccccC----CCCccccccccccEEEccCCcccC
Q 002897 385 GTLSA-----CTSLEYVKMQDNSFSG----SIPPSLNFLKSIKVLDLSSNKLSG 429 (869)
Q Consensus 385 ~~~~~-----l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 429 (869)
..+.. +++|++|++++|++++ .+|..+..+++|++|+|++|++++
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 33332 4566666666666654 445555556666666666666653
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=7.3e-36 Score=338.57 Aligned_cols=390 Identities=18% Similarity=0.149 Sum_probs=242.5
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCcc----ccCcccccCcCCCEEEccCCccCccCCccc-cCCC----C
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTG----QLPVSIGNLSALQVIDIRGNRLGGKIPDTL-GQLR----K 71 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~-~~l~----~ 71 (869)
.||+++|+++..-...++..+++|++|+|++|+++. .++..+..+++|++|+|++|++....+..+ ..++ +
T Consensus 7 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~ 86 (461)
T 1z7x_W 7 SLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 86 (461)
T ss_dssp EEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCC
T ss_pred ehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCc
Confidence 378999999844445557789999999999999984 457788899999999999999986444333 3455 7
Q ss_pred CCEEeCcCcccCc----cCCcccccCCCCcEEECcCCcCcccCCch----hhcCCcchhhhhcccccccee----ccccc
Q 002897 72 LIYLNIGRNQFSG----FIPPSIYNISSFEFIFLQSNRFHGSLPFD----MVANLPNLRKFVAAKNNLTGF----LPISL 139 (869)
Q Consensus 72 L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~~l~~L~~L~l~~n~i~~~----~~~~l 139 (869)
|++|+|++|+|.. .++..+.++++|++|+|++|.+.+..+.. .+...++|++|++++|+++.. ++..+
T Consensus 87 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 166 (461)
T 1z7x_W 87 IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVL 166 (461)
T ss_dssp CCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH
T ss_pred eeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHH
Confidence 9999999999984 45888999999999999999986322211 122244566666666666542 24445
Q ss_pred cCCCCCcEEEccCCccccccCcCcc-----CCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCC
Q 002897 140 SNASNLELLELRDNQFIGKMSINFN-----SLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLP 214 (869)
Q Consensus 140 ~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 214 (869)
..+++|++|++++|.+.......+. ..++|++|++++|.++..+.. .++..+..+++|++|++++|++++...
T Consensus 167 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 244 (461)
T 1z7x_W 167 RAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--DLCGIVASKASLRELALGSNKLGDVGM 244 (461)
T ss_dssp HHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--HHHHHHHHCTTCCEEECCSSBCHHHHH
T ss_pred hhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--HHHHHHHhCCCccEEeccCCcCChHHH
Confidence 5556666666666665443333222 234555555555555432211 122334445555555555555442211
Q ss_pred hhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec----CCccccCCCCCCEEEccCccccCcCCCCC
Q 002897 215 HSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT----VPPEIGWLKNLQSLYLNSNFLHGYIPSSL 290 (869)
Q Consensus 215 ~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 290 (869)
..+. +..+..+++|++|++++|.+... ++..+..+++|++|+|++|.+++..+..+
T Consensus 245 ~~l~--------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l 304 (461)
T 1z7x_W 245 AELC--------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLL 304 (461)
T ss_dssp HHHH--------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHH
T ss_pred HHHH--------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHH
Confidence 1111 12223456666666666666543 34555566777777777776654333222
Q ss_pred C-----CCccccceeccccccccc----CCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcc
Q 002897 291 G-----NLTMLTLLALEINNLQGK----IPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPS 361 (869)
Q Consensus 291 ~-----~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~ 361 (869)
. ..++|+.|++++|.+++. ++..+..+++|++|++++|++++..+..+. .
T Consensus 305 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~---------------------~ 363 (461)
T 1z7x_W 305 CETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC---------------------Q 363 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH---------------------H
T ss_pred HHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHH---------------------H
Confidence 2 225677777777777643 455667778888888888887632111111 1
Q ss_pred ccc-CCccccccccccccccc----cCCccccCCCCCcEEEeeCccccCCCCcccc-----ccccccEEEccCCcccCCC
Q 002897 362 EIG-NLKNLVQLDISGNRFSG----DIPGTLSACTSLEYVKMQDNSFSGSIPPSLN-----FLKSIKVLDLSSNKLSGQI 431 (869)
Q Consensus 362 ~~~-~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~ 431 (869)
.+. ..++|++|+|++|.+++ .+|..+..+++|++|++++|++++.....+. ...+|+.|++.+|.+....
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEM 443 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHH
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHH
Confidence 121 14578888888888875 6677777888888888888887743222221 1235666776666665433
Q ss_pred cc
Q 002897 432 PK 433 (869)
Q Consensus 432 p~ 433 (869)
+.
T Consensus 444 ~~ 445 (461)
T 1z7x_W 444 ED 445 (461)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.5e-31 Score=291.19 Aligned_cols=273 Identities=19% Similarity=0.197 Sum_probs=159.9
Q ss_pred ccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCccc
Q 002897 3 DAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQF 82 (869)
Q Consensus 3 ~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i 82 (869)
|+++++++ +||..++ ++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..|.+|+++++|++|+|++|++
T Consensus 37 ~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 37 KGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp ECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 55666666 6666554 3666666666666655555666666666666666666655566666666666666666666
Q ss_pred CccCCcccccCCCCcEEECcCCcCcccCCc-hhhcCCcchhhhhcccc-ccceeccccccCCCCCcEEEccCCccccccC
Q 002897 83 SGFIPPSIYNISSFEFIFLQSNRFHGSLPF-DMVANLPNLRKFVAAKN-NLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 83 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~L~~L~l~~n-~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
++..+..|.++++|++|+|++|++. .+|. ..|..+++|++|++++| .++...+..|.++++|++|++++|.+.+..+
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 6444444666666666666666665 5554 45555666666666665 3554445555556666666666666555555
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
..|..+++|++|++++|.++.++.. .+..+++|++|++++|++++..+..+..
T Consensus 192 ~~l~~l~~L~~L~l~~n~l~~~~~~------~~~~~~~L~~L~L~~n~l~~~~~~~l~~--------------------- 244 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQHILLLEI------FVDVTSSVECLELRDTDLDTFHFSELST--------------------- 244 (353)
T ss_dssp TTTTTCSEEEEEEEECSCSTTHHHH------HHHHTTTEEEEEEESCBCTTCCCC-------------------------
T ss_pred HHHhccccCCeecCCCCccccchhh------hhhhcccccEEECCCCcccccccccccc---------------------
Confidence 5555555555555555555443321 2333455555555555555433222211
Q ss_pred cccCCCCCCeeecccCccee----cCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIG----TVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQG 308 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 308 (869)
......++.++++++.+.+ .+|..+..+++|++|+|++|+++...+..|.++++|++|++++|++.+
T Consensus 245 -~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 245 -GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp ---CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred -ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 1123445555555555543 356667777888888888888874444445778888888888887763
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-30 Score=280.93 Aligned_cols=282 Identities=17% Similarity=0.148 Sum_probs=214.0
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
..+.....++++|+++ .+|..+. ++|++|+|++|+|++..+..|+++++|++|+|++|++++..|..|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4566677899999999 6776654 589999999999997777789999999999999999998888889999999999
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceecc-ccccCCCCCcEEEccCC-ccccccCcCccCCCCCCEEEccCc
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLP-ISLSNASNLELLELRDN-QFIGKMSINFNSLKNLSVLILGNN 177 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~l~~n 177 (869)
+|++|+++ .+|...|.++++|++|++++|.++...+ ..|.++++|++|++++| .+..+.+..|.++++|++|++++|
T Consensus 106 ~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 99999997 7787778888888888888888876544 47778888888888887 466666677777777777777777
Q ss_pred cCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhh-hhccccceEEEecCCcccccCCccccCCCCCCeeecccC
Q 002897 178 HLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSL-ANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGN 256 (869)
Q Consensus 178 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 256 (869)
.++..... .+..+++|++|++++|+++. .|..+ ..++ .|+.|++++|.+++..+..+..
T Consensus 185 ~l~~~~~~------~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~l~~------------ 244 (353)
T 2z80_A 185 DLQSYEPK------SLKSIQNVSHLILHMKQHIL-LLEIFVDVTS-SVECLELRDTDLDTFHFSELST------------ 244 (353)
T ss_dssp TCCEECTT------TTTTCSEEEEEEEECSCSTT-HHHHHHHHTT-TEEEEEEESCBCTTCCCC----------------
T ss_pred CcCccCHH------HHhccccCCeecCCCCcccc-chhhhhhhcc-cccEEECCCCcccccccccccc------------
Confidence 77765433 46677777777777777753 33333 3333 3677777777666433222111
Q ss_pred cceecCCccccCCCCCCEEEccCccccC----cCCCCCCCCccccceecccccccccCCcC-ccCccccceeeccCcccC
Q 002897 257 QLIGTVPPEIGWLKNLQSLYLNSNFLHG----YIPSSLGNLTMLTLLALEINNLQGKIPSS-LGNCTSLIMLTLSKNKLD 331 (869)
Q Consensus 257 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 331 (869)
......++.++|+++.+.+ .+|..+.++++|+.|++++|+++ .+|.. |..+++|++|++++|++.
T Consensus 245 ---------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 245 ---------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp -----------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ---------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCcc
Confidence 1235678888888888875 35667889999999999999999 55555 689999999999999998
Q ss_pred CCCC
Q 002897 332 GVLP 335 (869)
Q Consensus 332 ~~~~ 335 (869)
+..|
T Consensus 315 ~~~~ 318 (353)
T 2z80_A 315 CSCP 318 (353)
T ss_dssp CCHH
T ss_pred CcCC
Confidence 6544
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.5e-30 Score=277.31 Aligned_cols=280 Identities=19% Similarity=0.219 Sum_probs=161.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCcc--CCccccCCCCCCEEeCcC
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGK--IPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~--~p~~~~~l~~L~~L~L~~ 79 (869)
+++++++++ ++|..++ ++|++|+|++|+++.+.+..|.++++|++|+|++|+++.. .|..+..+++|++|+|++
T Consensus 12 l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~ 87 (306)
T 2z66_A 12 IRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSF 87 (306)
T ss_dssp EECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCS
T ss_pred EEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCC
Confidence 456666676 6776554 4667777777777644444566777777777777766622 245555667777777777
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCcccCCc-hhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccc-
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPF-DMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIG- 157 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~- 157 (869)
|.+. .+|..+.++++|++|++++|++. .++. ..+..+++|++|++++|.+++..+..|.++++|++|++++|.+.+
T Consensus 88 n~i~-~l~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 88 NGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp CSEE-EEEEEEETCTTCCEEECTTSEEE-SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred Cccc-cChhhcCCCCCCCEEECCCCccc-ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 7766 34555666777777777777665 3332 345555555555555555555555555555555555555555543
Q ss_pred ccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccccc
Q 002897 158 KMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGT 237 (869)
Q Consensus 158 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 237 (869)
..+..|..+++|++|++++| ++++..|..+..+++ |+.|++++|.+++.
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n------------------------------~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~ 214 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQC------------------------------QLEQLSPTAFNSLSS-LQVLNMSHNNFFSL 214 (306)
T ss_dssp EECSCCTTCTTCCEEECTTS------------------------------CCCEECTTTTTTCTT-CCEEECTTSCCSBC
T ss_pred cchhHHhhCcCCCEEECCCC------------------------------CcCCcCHHHhcCCCC-CCEEECCCCccCcc
Confidence 34444444555555555554 444444444444443 55555555555544
Q ss_pred CCccccCCCCCCeeecccCcceecCCccccCCC-CCCEEEccCccccCcCC--CCCCCCccccceecccccccccCCcCc
Q 002897 238 IPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLK-NLQSLYLNSNFLHGYIP--SSLGNLTMLTLLALEINNLQGKIPSSL 314 (869)
Q Consensus 238 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~ 314 (869)
.+..+..+++|+.|++++|++.+..|..+..++ +|++|+|++|.+++.-. .....+...+.+....+.+....|..+
T Consensus 215 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 215 DTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp CSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred ChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 444566666666666666666666666666663 67777777777663211 011223344555556666665666666
Q ss_pred cCcc
Q 002897 315 GNCT 318 (869)
Q Consensus 315 ~~l~ 318 (869)
.+.+
T Consensus 295 ~g~~ 298 (306)
T 2z66_A 295 QGMP 298 (306)
T ss_dssp TTCB
T ss_pred CCce
Confidence 5543
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.7e-29 Score=281.78 Aligned_cols=248 Identities=20% Similarity=0.246 Sum_probs=164.7
Q ss_pred CcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECc
Q 002897 23 KLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 102 (869)
+...++.+++.++ .+|..+. ++|++|+|++|+|+++.|+.|+++++|++|+|++|+|+++.|..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3566777777777 5565543 577777777777777777777777777777777777777767777777777777777
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccC-CccccccCcCccCCCCCCEEEccCccCCC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRD-NQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
+|++. .+|.+.|.++++|++|+|++|.++.+.+..|.++++|++|++++ |.+..+.+..|.++++|++|+|++|+++.
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 77776 56656666666666666666666665556666666666666666 44444444456666666666666666554
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++ .+..+++ |+.|+|++|.+++..|..|.++++|+.|++++|++.+.
T Consensus 211 ~~--------~~~~l~~-------------------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 257 (452)
T 3zyi_A 211 MP--------NLTPLVG-------------------------LEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLI 257 (452)
T ss_dssp CC--------CCTTCTT-------------------------CCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEE
T ss_pred cc--------ccccccc-------------------------ccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceE
Confidence 43 1344444 44555555555545555666666667777777777666
Q ss_pred CCccccCCCCCCEEEccCccccCcCCCCCCCCccccceeccccccc
Q 002897 262 VPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQ 307 (869)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 307 (869)
.+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 258 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 258 ERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 6667777777777777777777666666777777777777777665
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=280.37 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=158.4
Q ss_pred CcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECc
Q 002897 23 KLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 102 (869)
....++.++++++ .+|..+. +++++|+|++|+|+.+.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456666666666 5555443 566666666666666666666666666666666666666666666666666666666
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccC-CccccccCcCccCCCCCCEEEccCccCCC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRD-NQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
+|+++ .+|.+.|..+++|++|++++|.++...+..|.++++|++|+|++ |.+..+.+..|.++++|++|+|++|+++.
T Consensus 121 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 66665 55555555566666666666655555555566666666666665 33444444455555555555555555554
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++ .+..+++ |+.|+|++|.+++..|..|..+++|+.|+|++|++.+.
T Consensus 200 ~~--------~~~~l~~-------------------------L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 246 (440)
T 3zyj_A 200 IP--------NLTPLIK-------------------------LDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI 246 (440)
T ss_dssp CC--------CCTTCSS-------------------------CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred cc--------ccCCCcc-------------------------cCEEECCCCccCccChhhhccCccCCEEECCCCceeEE
Confidence 33 1333444 55555555555555566677777777777777777777
Q ss_pred CCccccCCCCCCEEEccCccccCcCCCCCCCCccccceeccccccc
Q 002897 262 VPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQ 307 (869)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 307 (869)
.+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 247 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 247 ERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 7777777777788888888777777777777778888888887765
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.5e-29 Score=283.15 Aligned_cols=244 Identities=19% Similarity=0.196 Sum_probs=206.9
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++++++ +||.+++ +++++|+|++|+|+++.|.+|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+
T Consensus 59 v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 467889999 8998876 699999999999999889999999999999999999999989999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccc-cccceeccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAK-NNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
|+...+..|.++++|++|+|++|++. .+|...|.++++|+.|++++ |.+..+.+..|.++++|++|+|++|+++++.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC-
T ss_pred CCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc-
Confidence 99888888999999999999999998 88888999999999999999 5666666678999999999999999998763
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
.+..+++|++|+|++|.++.+... .|.++++|++|+|++|++++.. +.
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~~-------------------------~~ 260 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPG------SFHGLSSLKKLWVMNSQVSLIE-------------------------RN 260 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGG------GGTTCTTCCEEECTTSCCCEEC-------------------------TT
T ss_pred -cccccccccEEECcCCcCcccCcc------cccCccCCCEEEeCCCcCceEC-------------------------HH
Confidence 588999999999999999876543 5777777777777777776444 44
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLH 283 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 283 (869)
.|..+++|+.|+|++|++.+..+..|..+++|+.|+|++|.+.
T Consensus 261 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 261 AFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred HhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 4555566666666666666555566667777777777777665
No 305
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=281.90 Aligned_cols=244 Identities=20% Similarity=0.223 Sum_probs=207.5
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
++.++++++ +||.+++ ++++.|+|++|+|+++.+.+|.++++|++|+|++|+|+.+.+.+|.++++|++|+|++|+
T Consensus 48 v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 467889999 9999886 789999999999998888999999999999999999998888999999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccc-cccceeccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAK-NNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
|+.+.+..|.++++|++|+|++|++. .+|...|.++++|++|++++ |.+..+.+..|.++++|++|+|++|.++.+.
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc-
Confidence 99887789999999999999999998 88888999999999999999 5666666678999999999999999998664
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
.+..+++|++|+|++|.++.+... .|.++++|++|+|++|++++. .+.
T Consensus 202 -~~~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~L~~n~l~~~-------------------------~~~ 249 (440)
T 3zyj_A 202 -NLTPLIKLDELDLSGNHLSAIRPG------SFQGLMHLQKLWMIQSQIQVI-------------------------ERN 249 (440)
T ss_dssp -CCTTCSSCCEEECTTSCCCEECTT------TTTTCTTCCEEECTTCCCCEE-------------------------CTT
T ss_pred -ccCCCcccCEEECCCCccCccChh------hhccCccCCEEECCCCceeEE-------------------------Chh
Confidence 589999999999999999887654 577777777777777777644 344
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLH 283 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 283 (869)
.|..+++|+.|+|++|++....+..|..+++|+.|+|++|.+.
T Consensus 250 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 250 AFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp SSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred hhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 5555666666666666666566666677777777777777765
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=8.8e-30 Score=268.35 Aligned_cols=266 Identities=20% Similarity=0.228 Sum_probs=136.7
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ .+|.+++ ++|++|+|++|.++++.+..|..+++|++|+|++|++++..|.+|+++++|++|+|++|.
T Consensus 16 ~~c~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 16 TSCPQQGLQ-AVPVGIP---AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EECCSSCCS-SCCTTCC---TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEcCcCCcc-cCCcCCC---CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 455556666 5665443 456666666666665555556666666666666666665555566666666666666664
Q ss_pred -cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC
Q 002897 82 -FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 -i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+....|..|.++++|++|+|++|++. .+ .+..|.++++|++|++++|+++.+.+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQ-EL------------------------GPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCC-CC------------------------CTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCC-EE------------------------CHhHhhCCcCCCEEECCCCcccccCH
Confidence 55444555556666666666666555 33 34444444444555555554444444
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCc
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPP 240 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 240 (869)
..|..+++|++|++++|+++.++.. .|..+++|++|++++|++++..|..+..+++ |+.|++++|.+++..+.
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~ 219 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPER------AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR-LMTLYLFANNLSALPTE 219 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTT------TTTTCTTCCEEECCSSCCCEECTTTTTTCTT-CCEEECCSSCCSCCCHH
T ss_pred hHhccCCCccEEECCCCcccccCHH------HhcCccccCEEECCCCcccccCHhHccCccc-ccEeeCCCCcCCcCCHH
Confidence 4444445555555555544444332 2444455555555555555444545544443 55555555555544444
Q ss_pred cccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCC--Cccccceecccc
Q 002897 241 GLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGN--LTMLTLLALEIN 304 (869)
Q Consensus 241 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~l~~n 304 (869)
.+..+++|+.|++++|.+....+.. .-...++.+..+.+.+....|..+.+ +..++..++.+|
T Consensus 220 ~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 220 ALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp HHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred HcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 4555555666666666554322110 00112333345555555555554433 334444444443
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.3e-29 Score=266.97 Aligned_cols=251 Identities=17% Similarity=0.196 Sum_probs=173.0
Q ss_pred CCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCC--chhhcCCcchhhhh
Q 002897 48 LQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLP--FDMVANLPNLRKFV 125 (869)
Q Consensus 48 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~l~~L~~L~ 125 (869)
-+.++++++.++ .+|..+. ++|++|+|++|+++.+.+..|.++++|++|+|++|++. .+. ...+..+++|++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS-FKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-EEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccC-cccCcccccccccccCEEE
Confidence 357888888888 6666554 68888999998888655556788888888888888876 221 12233445555555
Q ss_pred ccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEcc
Q 002897 126 AAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLY 205 (869)
Q Consensus 126 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 205 (869)
+++|.++. +|..+.. +++|++|++++|.++.++.. ..+..+++|++|+++
T Consensus 85 Ls~n~i~~-l~~~~~~------------------------l~~L~~L~l~~n~l~~~~~~-----~~~~~l~~L~~L~l~ 134 (306)
T 2z66_A 85 LSFNGVIT-MSSNFLG------------------------LEQLEHLDFQHSNLKQMSEF-----SVFLSLRNLIYLDIS 134 (306)
T ss_dssp CCSCSEEE-EEEEEET------------------------CTTCCEEECTTSEEESSTTT-----TTTTTCTTCCEEECT
T ss_pred CCCCcccc-ChhhcCC------------------------CCCCCEEECCCCcccccccc-----hhhhhccCCCEEECC
Confidence 55554442 2333444 44555555555544443320 135555666666666
Q ss_pred CCCCCCCCChhhhhccccceEEEecCCcccc-cCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccC
Q 002897 206 DNQFGGLLPHSLANLSNTMTTIDIGGNYFSG-TIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHG 284 (869)
Q Consensus 206 ~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 284 (869)
+|++++..+..+..+++ |++|++++|.+++ ..|..+..+++|++|++++|++.+..|..+..+++|++|+|++|.+++
T Consensus 135 ~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 135 HTHTRVAFNGIFNGLSS-LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp TSCCEECSTTTTTTCTT-CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCcCCccchhhcccCcC-CCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 66666555555655554 6777777777665 467778888888888888888887778888888888888888888887
Q ss_pred cCCCCCCCCccccceecccccccccCCcCccCcc-ccceeeccCcccCCC
Q 002897 285 YIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCT-SLIMLTLSKNKLDGV 333 (869)
Q Consensus 285 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~ 333 (869)
..+..+..+++|+.|++++|++++..|..+..++ +|++|++++|++++.
T Consensus 214 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 214 LDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 7776788888888888888888877888888874 888888888888744
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.3e-29 Score=263.97 Aligned_cols=269 Identities=20% Similarity=0.190 Sum_probs=221.5
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
-+.++.+++.++ .+|..+ .++|++|+|++|+|+...+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 467888888888 556544 46888888888888877777888888888888888888877777888888888888888
Q ss_pred Cc-CcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCC
Q 002897 104 NR-FHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNR 182 (869)
Q Consensus 104 N~-l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 182 (869)
|+ +. . ..+..|..+++|++|++++|.++++.+..|..+++|++|++++|.++.+
T Consensus 90 n~~l~-~------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 144 (285)
T 1ozn_A 90 NAQLR-S------------------------VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL 144 (285)
T ss_dssp CTTCC-C------------------------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCcc-c------------------------cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccccc
Confidence 86 54 3 3355777889999999999999999899999999999999999999988
Q ss_pred CCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecC
Q 002897 183 AANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTV 262 (869)
Q Consensus 183 ~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 262 (869)
+.. .|..+++|++|++++|++++..+..+..+.+ |+.|++++|.+++..|..|..+++|+.|++++|++.+..
T Consensus 145 ~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 217 (285)
T 1ozn_A 145 PDD------TFRDLGNLTHLFLHGNRISSVPERAFRGLHS-LDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (285)
T ss_dssp CTT------TTTTCTTCCEEECCSSCCCEECTTTTTTCTT-CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CHh------HhccCCCccEEECCCCcccccCHHHhcCccc-cCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCC
Confidence 754 5889999999999999999777778888876 999999999999999999999999999999999999877
Q ss_pred CccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccC--ccccceeeccCc
Q 002897 263 PPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGN--CTSLIMLTLSKN 328 (869)
Q Consensus 263 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--l~~L~~L~l~~N 328 (869)
+..+..+++|+.|+|++|.+....+ ...-...++.+..+.+.+....|..+.+ +..++..++.+|
T Consensus 218 ~~~~~~l~~L~~L~l~~N~~~c~~~-~~~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~l~~C 284 (285)
T 1ozn_A 218 TEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGC 284 (285)
T ss_dssp HHHHTTCTTCCEEECCSSCEECSGG-GHHHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGGSCCC
T ss_pred HHHcccCcccCEEeccCCCccCCCC-cHHHHHHHHhcccccCccccCCchHhCCcChhhcCHHHhccC
Confidence 7789999999999999999974322 1122345777788888888788887765 445555555544
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=4.3e-30 Score=274.81 Aligned_cols=264 Identities=16% Similarity=0.217 Sum_probs=149.2
Q ss_pred ccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCccc
Q 002897 3 DAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQF 82 (869)
Q Consensus 3 ~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i 82 (869)
|++++.+. +++..++..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..| |+.+++|++|+|++|++
T Consensus 16 ~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l 92 (317)
T 3o53_A 16 KVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV 92 (317)
T ss_dssp SCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEE
T ss_pred eccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcc
Confidence 44445554 4444454445555555555555554444555555555555555555553322 55555555555555555
Q ss_pred CccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcC
Q 002897 83 SGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSIN 162 (869)
Q Consensus 83 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 162 (869)
++.. ..++|++|++++|++. +..+.. +++|++|++++|+++++.+..
T Consensus 93 ~~l~-----~~~~L~~L~l~~n~l~-------------------------~~~~~~---~~~L~~L~l~~N~l~~~~~~~ 139 (317)
T 3o53_A 93 QELL-----VGPSIETLHAANNNIS-------------------------RVSCSR---GQGKKNIYLANNKITMLRDLD 139 (317)
T ss_dssp EEEE-----ECTTCCEEECCSSCCS-------------------------EEEECC---CSSCEEEECCSSCCCSGGGBC
T ss_pred cccc-----CCCCcCEEECCCCccC-------------------------CcCccc---cCCCCEEECCCCCCCCccchh
Confidence 4321 2245555555555554 333222 344555555555555555555
Q ss_pred ccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccc
Q 002897 163 FNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGL 242 (869)
Q Consensus 163 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~ 242 (869)
|..+++|++|++++|.++.+... ..+..+++|++|+|++|++++..+. ..++ .|++|+|++|.+++ +|..+
T Consensus 140 ~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~~l~~L~~L~L~~N~l~~~~~~--~~l~-~L~~L~Ls~N~l~~-l~~~~ 210 (317)
T 3o53_A 140 EGCRSRVQYLDLKLNEIDTVNFA-----ELAASSDTLEHLNLQYNFIYDVKGQ--VVFA-KLKTLDLSSNKLAF-MGPEF 210 (317)
T ss_dssp TGGGSSEEEEECTTSCCCEEEGG-----GGGGGTTTCCEEECTTSCCCEEECC--CCCT-TCCEEECCSSCCCE-ECGGG
T ss_pred hhccCCCCEEECCCCCCCcccHH-----HHhhccCcCCEEECCCCcCcccccc--cccc-cCCEEECCCCcCCc-chhhh
Confidence 55555555555555555544322 0123455566666666655533111 1233 26666666666663 34447
Q ss_pred cCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcccc-CcCCCCCCCCccccceecccc-cccccCCc
Q 002897 243 GNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLH-GYIPSSLGNLTMLTLLALEIN-NLQGKIPS 312 (869)
Q Consensus 243 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~ 312 (869)
..+++|+.|++++|++. .+|..+..+++|+.|+|++|.+. +..+..+..+++|+.|++++| .+++..+.
T Consensus 211 ~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 211 QSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp GGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 77777888888888877 45667778888888888888887 666777788888888888844 45544443
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.5e-28 Score=261.82 Aligned_cols=226 Identities=20% Similarity=0.287 Sum_probs=167.2
Q ss_pred CCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEE
Q 002897 197 SKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLY 276 (869)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 276 (869)
++++.|+|++|+++ .+|..+..+.. |++|+|++|.++ .+|..+..+++|++|+|++|++. .+|..++.+++|++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~-L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSH-LQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTT-CSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCC-CCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 45566666666665 44555555554 666666666666 56666666666777777777666 5566666777777777
Q ss_pred ccCccccCcCCCCCCC---------CccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccce
Q 002897 277 LNSNFLHGYIPSSLGN---------LTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLF 347 (869)
Q Consensus 277 L~~N~l~~~~~~~~~~---------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~ 347 (869)
|++|++.+.+|..+.. +++|++|++++|+++ .+|..+..+++|++|++++|+++
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~---------------- 219 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS---------------- 219 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC----------------
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC----------------
Confidence 7776666666665543 666777777777766 56666777777777766666665
Q ss_pred ecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcc
Q 002897 348 LNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKL 427 (869)
Q Consensus 348 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 427 (869)
.+|..++.+++|++|+|++|.+.+.+|..+.++++|+.|++++|++.+.+|..++.+++|+.|+|++|++
T Consensus 220 ----------~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 220 ----------ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp ----------CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred ----------cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 3455678888899999999888888888899999999999999888888898899999999999999988
Q ss_pred cCCCccccccccccCeeccccccCcc
Q 002897 428 SGQIPKYLENLSFLEYLNLSYNHFEG 453 (869)
Q Consensus 428 ~~~~p~~~~~l~~L~~l~l~~N~l~~ 453 (869)
.+.+|..+.++++|+.++++.|.+..
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred hhhccHHHhhccCceEEeCCHHHHHH
Confidence 88999999999999999988877653
No 311
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3.4e-32 Score=318.75 Aligned_cols=417 Identities=13% Similarity=0.098 Sum_probs=248.8
Q ss_pred cCChhhhhccCCcCEEeccCCcCc---cccCcccc------------cCcCCCEEEccCCccCccCCccccCC--CCCCE
Q 002897 12 DIPVEIGCYLFKLENLSLAENHLT---GQLPVSIG------------NLSALQVIDIRGNRLGGKIPDTLGQL--RKLIY 74 (869)
Q Consensus 12 ~ip~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~------------~l~~L~~L~L~~n~i~~~~p~~~~~l--~~L~~ 74 (869)
..|..++..+++|+.|+|+++... +.+|..++ .+++|++|+|++|.++...+..+..+ ++|++
T Consensus 63 ~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~ 142 (592)
T 3ogk_B 63 ATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLET 142 (592)
T ss_dssp SCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCE
T ss_pred cChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcE
Confidence 455666667788888888765321 22332222 67888888888887776555556553 34888
Q ss_pred EeCcCcc-cCc-cCCcccccCCCCcEEECcCCcCcccCC---chhhcCCcchhhhhccccccc----eeccccccCCCCC
Q 002897 75 LNIGRNQ-FSG-FIPPSIYNISSFEFIFLQSNRFHGSLP---FDMVANLPNLRKFVAAKNNLT----GFLPISLSNASNL 145 (869)
Q Consensus 75 L~L~~n~-i~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~~l~~L~~L~l~~n~i~----~~~~~~l~~l~~L 145 (869)
|+|++|. +.. .++..+.++++|++|+|++|.+.+.-. ...+..+++|++|++++|.++ ..++..+.++++|
T Consensus 143 L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L 222 (592)
T 3ogk_B 143 LKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSL 222 (592)
T ss_dssp EEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTC
T ss_pred EECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCC
Confidence 8888876 221 122233467888888888887753311 124556778888888888776 3344556677888
Q ss_pred cEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccce
Q 002897 146 ELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMT 225 (869)
Q Consensus 146 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~ 225 (869)
++|++++|.+.+ .+..+..+++|++|+++.+....... .....+..+++|+.|+++++... .+|..+..+++ |+
T Consensus 223 ~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~---~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~-L~ 296 (592)
T 3ogk_B 223 VSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMP---EKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQ-IR 296 (592)
T ss_dssp CEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCT---TSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGG-CC
T ss_pred cEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchH---HHHHHhhccccccccCccccchh-HHHHHHhhcCC-Cc
Confidence 888888887765 34567777888888887533221111 12234667777888887775433 45555555554 77
Q ss_pred EEEecCCcccccCC-ccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccC-----------ccccCcCC-CCCCC
Q 002897 226 TIDIGGNYFSGTIP-PGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNS-----------NFLHGYIP-SSLGN 292 (869)
Q Consensus 226 ~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-----------N~l~~~~~-~~~~~ 292 (869)
+|+|++|.+++... ..+..+++|+.|+++++.....++..+..+++|++|+|++ |.+++... ..+..
T Consensus 297 ~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~ 376 (592)
T 3ogk_B 297 KLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQG 376 (592)
T ss_dssp EEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHH
T ss_pred EEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhh
Confidence 78887777654333 3356777777777773322222333335567777777773 44443211 11234
Q ss_pred CccccceecccccccccCCcCccC-ccccceeecc----CcccCCCCCccccccccccceecccCCcccCCCcccccCCc
Q 002897 293 LTMLTLLALEINNLQGKIPSSLGN-CTSLIMLTLS----KNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLK 367 (869)
Q Consensus 293 l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~----~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~ 367 (869)
+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++...+. .++..+.+++
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~--------------------~~~~~~~~~~ 436 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN--------------------GVRSLLIGCK 436 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH--------------------HHHHHHHHCT
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH--------------------HHHHHHHhCC
Confidence 666777777666666554445544 6667777774 44444211000 1222355566
Q ss_pred cccccccccc--cccccCCcccc-CCCCCcEEEeeCccccCC-CCccccccccccEEEccCCcccCC-CccccccccccC
Q 002897 368 NLVQLDISGN--RFSGDIPGTLS-ACTSLEYVKMQDNSFSGS-IPPSLNFLKSIKVLDLSSNKLSGQ-IPKYLENLSFLE 442 (869)
Q Consensus 368 ~L~~L~L~~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~ 442 (869)
+|++|+|++| .+++..+..+. .+++|+.|++++|++++. ++..+..+++|+.|+|++|.+++. ++..+..+++|+
T Consensus 437 ~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 516 (592)
T 3ogk_B 437 KLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLR 516 (592)
T ss_dssp TCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCC
T ss_pred CCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccC
Confidence 7777777643 35544444443 367777777777777642 233445667777777777776543 333445677777
Q ss_pred eeccccccCccc
Q 002897 443 YLNLSYNHFEGE 454 (869)
Q Consensus 443 ~l~l~~N~l~~~ 454 (869)
+|++++|++++.
T Consensus 517 ~L~ls~n~it~~ 528 (592)
T 3ogk_B 517 YLWVQGYRASMT 528 (592)
T ss_dssp EEEEESCBCCTT
T ss_pred eeECcCCcCCHH
Confidence 777777776643
No 312
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2e-31 Score=312.16 Aligned_cols=394 Identities=13% Similarity=0.076 Sum_probs=276.3
Q ss_pred hccCCcCEEeccCCcCccccCcccccC--cCCCEEEccCCc-cCc-cCCccccCCCCCCEEeCcCcccCcc----CCccc
Q 002897 19 CYLFKLENLSLAENHLTGQLPVSIGNL--SALQVIDIRGNR-LGG-KIPDTLGQLRKLIYLNIGRNQFSGF----IPPSI 90 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~L~~n~-i~~-~~p~~~~~l~~L~~L~L~~n~i~~~----~p~~~ 90 (869)
..+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. .++..+..+++|++|+|++|.+.+. ++..+
T Consensus 109 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 109 NNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 368999999999999987777777764 459999999987 321 2233345789999999999998765 33456
Q ss_pred ccCCCCcEEECcCCcCcccCCc----hhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccc---cccCcCc
Q 002897 91 YNISSFEFIFLQSNRFHGSLPF----DMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFI---GKMSINF 163 (869)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~~~~~~----~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~---~~~~~~~ 163 (869)
.++++|++|+|++|.+. .+.. ..+.++++|++|++++|.+.+ ++..+.++++|+.|+++.+... ......+
T Consensus 189 ~~~~~L~~L~L~~n~~~-~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFA-KISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCS-SCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCC-ccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 78999999999999986 2221 345678999999999999986 6788999999999999865432 2334567
Q ss_pred cCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCC-hhhhhccccceEEEecCCcccc-cCCcc
Q 002897 164 NSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLP-HSLANLSNTMTTIDIGGNYFSG-TIPPG 241 (869)
Q Consensus 164 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~~L~~L~l~~n~l~~-~~~~~ 241 (869)
..+++|+.|+++++....++ ..+..+++|++|+|++|.+++... ..+..+++ |+.|+++ +.+.. .++..
T Consensus 267 ~~~~~L~~L~l~~~~~~~l~-------~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~-L~~L~L~-~~~~~~~l~~~ 337 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPNEMP-------ILFPFAAQIRKLDLLYALLETEDHCTLIQKCPN-LEVLETR-NVIGDRGLEVL 337 (592)
T ss_dssp CCCTTCCEEEETTCCTTTGG-------GGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTT-CCEEEEE-GGGHHHHHHHH
T ss_pred hccccccccCccccchhHHH-------HHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcC-CCEEecc-CccCHHHHHHH
Confidence 88899999999886544433 457789999999999999765444 23456665 9999999 44443 33444
Q ss_pred ccCCCCCCeeeccc-----------CcceecCC-ccccCCCCCCEEEccCccccCcCCCCCCC-Cccccceecc----cc
Q 002897 242 LGNLVHLNSIAMEG-----------NQLIGTVP-PEIGWLKNLQSLYLNSNFLHGYIPSSLGN-LTMLTLLALE----IN 304 (869)
Q Consensus 242 ~~~l~~L~~L~l~~-----------n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~l~----~n 304 (869)
+..+++|++|++++ |.++.... ..+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n 417 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREE 417 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCS
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCc
Confidence 56789999999993 56654322 22456899999999999998766666655 8899999996 67
Q ss_pred ccccc-----CCcCccCccccceeeccCcc--cCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccc
Q 002897 305 NLQGK-----IPSSLGNCTSLIMLTLSKNK--LDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGN 377 (869)
Q Consensus 305 ~l~~~-----~~~~~~~l~~L~~L~l~~N~--l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 377 (869)
.+++. ++..+.++++|+.|++++|. +++..+..+. ..+++|++|+|++|
T Consensus 418 ~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~------------------------~~~~~L~~L~L~~n 473 (592)
T 3ogk_B 418 RITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIG------------------------QYSPNVRWMLLGYV 473 (592)
T ss_dssp CCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHH------------------------HSCTTCCEEEECSC
T ss_pred cccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHH------------------------HhCccceEeeccCC
Confidence 77742 33346778999999997543 4422111111 23556777777777
Q ss_pred cccc-cCCccccCCCCCcEEEeeCccccCC-CCccccccccccEEEccCCcccCCCcccc-ccccccCeeccc
Q 002897 378 RFSG-DIPGTLSACTSLEYVKMQDNSFSGS-IPPSLNFLKSIKVLDLSSNKLSGQIPKYL-ENLSFLEYLNLS 447 (869)
Q Consensus 378 ~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~l~l~ 447 (869)
.+++ .++..+.++++|++|++++|++++. ++..+..+++|+.|+|++|+++..-...+ ..++.+....+.
T Consensus 474 ~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~ 546 (592)
T 3ogk_B 474 GESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIP 546 (592)
T ss_dssp CSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEEC
T ss_pred CCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEec
Confidence 7664 2344456677777777777776543 22333556777777777777764422222 234444444333
No 313
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.5e-28 Score=260.69 Aligned_cols=234 Identities=23% Similarity=0.243 Sum_probs=146.0
Q ss_pred cCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEE
Q 002897 21 LFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIF 100 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~ 100 (869)
..+++.|+|++|+++ .+|..+..+++|++|+|++|.++ .+|..|+++++|++|+|++|+++ .+|..|.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478888888888888 77778888888888888888888 78888888888888888888888 6688888888888888
Q ss_pred CcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 101 LQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 101 Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
|++|.+.+.+|..... + ..+..|.++++|++|+|++|+++ ..|..|..+++|++|+|++|.++
T Consensus 157 L~~n~~~~~~p~~~~~------------~----~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 157 IRACPELTELPEPLAS------------T----DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEETTCCCCCSCSEE------------E----C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred CCCCCCccccChhHhh------------c----cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 8888777666643211 0 11233455666666666666655 33444555555555555555555
Q ss_pred CCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCccee
Q 002897 181 NRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIG 260 (869)
Q Consensus 181 ~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 260 (869)
.++. .+..+++|++|+|++|++.+.+| ..+..+++|++|++++|++.+
T Consensus 220 ~l~~-------~l~~l~~L~~L~Ls~n~~~~~~p-------------------------~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 220 ALGP-------AIHHLPKLEELDLRGCTALRNYP-------------------------PIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp CCCG-------GGGGCTTCCEEECTTCTTCCBCC-------------------------CCTTCCCCCCEEECTTCTTCC
T ss_pred cCch-------hhccCCCCCEEECcCCcchhhhH-------------------------HHhcCCCCCCEEECCCCCchh
Confidence 4332 24455555555555555544444 444444455555555544444
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccc
Q 002897 261 TVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNL 306 (869)
Q Consensus 261 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 306 (869)
.+|..++.+++|++|+|++|++.+.+|..++++++|+.+++..+.+
T Consensus 268 ~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 268 TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp BCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 4555555555555555555555555555555555555555544433
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=6.9e-28 Score=277.67 Aligned_cols=277 Identities=24% Similarity=0.281 Sum_probs=226.2
Q ss_pred CChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCccccc
Q 002897 13 IPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYN 92 (869)
Q Consensus 13 ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~ 92 (869)
+|....|...+++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .
T Consensus 31 ~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~ 99 (622)
T 3g06_A 31 VQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---L 99 (622)
T ss_dssp HHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---C
T ss_pred CcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---C
Confidence 44444555567999999999999 7777765 79999999999998 5665 57899999999999984 555 7
Q ss_pred CCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEE
Q 002897 93 ISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVL 172 (869)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 172 (869)
+++|++|+|++|+++ .+|. .+++|+.|++++|+++.+ |.. +++|++|+|++|+++++.. .+++|+.|
T Consensus 100 l~~L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~l~~----~~~~L~~L 166 (622)
T 3g06_A 100 PPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLASLPA----LPSELCKL 166 (622)
T ss_dssp CTTCCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSCCCC----CCTTCCEE
T ss_pred CCCCCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCCcCC----ccCCCCEE
Confidence 789999999999998 6774 678899999999999864 443 4899999999999987543 35789999
Q ss_pred EccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeee
Q 002897 173 ILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIA 252 (869)
Q Consensus 173 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 252 (869)
++++|.++.++ ..+++|+.|++++|++++ +|..+ .+|+.|++++|.++ .+|.. +++|+.|+
T Consensus 167 ~L~~N~l~~l~----------~~~~~L~~L~Ls~N~l~~-l~~~~----~~L~~L~L~~N~l~-~l~~~---~~~L~~L~ 227 (622)
T 3g06_A 167 WAYNNQLTSLP----------MLPSGLQELSVSDNQLAS-LPTLP----SELYKLWAYNNRLT-SLPAL---PSGLKELI 227 (622)
T ss_dssp ECCSSCCSCCC----------CCCTTCCEEECCSSCCSC-CCCCC----TTCCEEECCSSCCS-SCCCC---CTTCCEEE
T ss_pred ECCCCCCCCCc----------ccCCCCcEEECCCCCCCC-CCCcc----chhhEEECcCCccc-ccCCC---CCCCCEEE
Confidence 99999998876 236889999999999985 44322 34999999999998 45543 47899999
Q ss_pred cccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCC
Q 002897 253 MEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDG 332 (869)
Q Consensus 253 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 332 (869)
+++|++.+ +| ..+++|+.|+|++|.|+. +|. .+++|+.|++++|+|+ .+|..|..+++|+.|+|++|++++
T Consensus 228 Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 228 VSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp CCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred ccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCC
Confidence 99999985 55 456899999999999994 554 6788999999999999 789999999999999999999997
Q ss_pred CCCcccccc
Q 002897 333 VLPPQILSV 341 (869)
Q Consensus 333 ~~~~~~~~~ 341 (869)
..|..+...
T Consensus 299 ~~~~~l~~L 307 (622)
T 3g06_A 299 RTLQALREI 307 (622)
T ss_dssp HHHHHHHHH
T ss_pred cCHHHHHhc
Confidence 666555443
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.6e-27 Score=274.53 Aligned_cols=269 Identities=23% Similarity=0.292 Sum_probs=212.9
Q ss_pred cCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhh
Q 002897 46 SALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFV 125 (869)
Q Consensus 46 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 125 (869)
.++++|++++|.|+ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|+++ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV----LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC----CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC----CCCCCCEEE
Confidence 46899999999998 7777666 799999999999984 555 5789999999999997 7775 678999999
Q ss_pred ccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEcc
Q 002897 126 AAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLY 205 (869)
Q Consensus 126 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 205 (869)
+++|+++++.. .+++|+.|++++|+|+.+.. .+++|++|+|++|+++.++. .+++|+.|+++
T Consensus 108 Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~----------~~~~L~~L~L~ 169 (622)
T 3g06_A 108 IFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASLPA----------LPSELCKLWAY 169 (622)
T ss_dssp ECSCCCCCCCC----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC----------CCTTCCEEECC
T ss_pred CcCCcCCCCCC----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCcCC----------ccCCCCEEECC
Confidence 99999986533 56889999999999887544 24889999999999987653 24688999999
Q ss_pred CCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCc
Q 002897 206 DNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGY 285 (869)
Q Consensus 206 ~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 285 (869)
+|++++ +| ..+ .+|+.|++++|.+++ +|.. +++|+.|++++|.+. .+|.. +++|+.|+|++|.|++
T Consensus 170 ~N~l~~-l~---~~~-~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~- 235 (622)
T 3g06_A 170 NNQLTS-LP---MLP-SGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS- 235 (622)
T ss_dssp SSCCSC-CC---CCC-TTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-
T ss_pred CCCCCC-Cc---ccC-CCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-
Confidence 999985 44 222 349999999999984 4443 478899999999988 44432 4789999999999985
Q ss_pred CCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccC
Q 002897 286 IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGN 365 (869)
Q Consensus 286 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~ 365 (869)
+| ..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.. .+.++.|+|++|.+++..|..+..
T Consensus 236 lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~-l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 236 LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIH-LSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGG-SCTTCEEECCSCCCCHHHHHHHHH
T ss_pred CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhh-ccccCEEEecCCCCCCcCHHHHHh
Confidence 44 45688999999999998 5565 5688999999999998 67776554 455678999999999877776665
Q ss_pred Cc
Q 002897 366 LK 367 (869)
Q Consensus 366 l~ 367 (869)
++
T Consensus 307 L~ 308 (622)
T 3g06_A 307 IT 308 (622)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.8e-29 Score=269.97 Aligned_cols=268 Identities=18% Similarity=0.180 Sum_probs=214.9
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
..++.++++.+.+....+..+..+++|++|+|++|+|++..|..|+++++|++|+|++|++++..+ |.++++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 346666777777775555666677778888888888876666777788888888888887775443 677777777777
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|++. .++ ..++|++|++++|+++++.+.. +++|++|++++|+++.
T Consensus 88 s~n~l~-~l~-----------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 88 NNNYVQ-ELL-----------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM 134 (317)
T ss_dssp CSSEEE-EEE-----------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS
T ss_pred cCCccc-ccc-----------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC
Confidence 777665 221 2279999999999998877654 5789999999999998
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhh-hccccceEEEecCCcccccCCccccCCCCCCeeecccCccee
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLA-NLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIG 260 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 260 (869)
++.. .+..+++|++|++++|++++..+..+. .++. |++|++++|.+++. .....+++|++|++++|++.+
T Consensus 135 ~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~-L~~L~L~~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~ 205 (317)
T 3o53_A 135 LRDL------DEGCRSRVQYLDLKLNEIDTVNFAELAASSDT-LEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAF 205 (317)
T ss_dssp GGGB------CTGGGSSEEEEECTTSCCCEEEGGGGGGGTTT-CCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCE
T ss_pred ccch------hhhccCCCCEEECCCCCCCcccHHHHhhccCc-CCEEECCCCcCccc--ccccccccCCEEECCCCcCCc
Confidence 7653 578899999999999999988777775 4554 99999999999966 234459999999999999996
Q ss_pred cCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceeccccccc-ccCCcCccCccccceeeccC-cccCCCCC
Q 002897 261 TVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQ-GKIPSSLGNCTSLIMLTLSK-NKLDGVLP 335 (869)
Q Consensus 261 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~-N~l~~~~~ 335 (869)
. |..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++. +..+..+..+++|+.|++++ +.+++..|
T Consensus 206 l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 206 M-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp E-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred c-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 5 445899999999999999999 56788999999999999999998 77888999999999999994 44554443
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=4.7e-29 Score=285.81 Aligned_cols=187 Identities=14% Similarity=0.032 Sum_probs=132.1
Q ss_pred eeeeecceEEEEEEECCCCeEEEEEEeeccc----------chhhHHHHHHHHHHHhC-CCCccceEEEEeeccccCCCc
Q 002897 561 MVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ----------KGALKSFLTECEALRSI-RHRNLIKIITICSSIDFNGVD 629 (869)
Q Consensus 561 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 629 (869)
..+.|+.|.+..++..-.|+.||+|++.... +...+++.+|+++|+++ .|+||+++++++.+ ..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed-----~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGEN-----AQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEEC-----SS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEE-----CC
Confidence 4566777777776666678999999996431 22346799999999999 79999999999654 48
Q ss_pred eEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccc
Q 002897 630 FKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDF 709 (869)
Q Consensus 630 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 709 (869)
..||||||++|++|.+++..... ++.. +|+.||++||+|+|++ |||||||||+|||++.+|.+||+||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~~------l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGEE------IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTCC------CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCCC------CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 89999999999999999987653 5554 5789999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCC
Q 002897 710 GLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 710 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
|+|+...... ......+||+.|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 384 GlAr~~~~~~--------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 384 GSIVTTPQDC--------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp TTEESCC-----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ccCeeCCCCC--------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 9998765432 22345679999999999876 5677899999999998887765543
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.6e-29 Score=268.07 Aligned_cols=202 Identities=21% Similarity=0.253 Sum_probs=123.8
Q ss_pred ceEEEecCCcccccCCccc--cCCCCCCeeecccCcceecCCccccCC-----CCCCEEEccCccccCcCCCCCCCCccc
Q 002897 224 MTTIDIGGNYFSGTIPPGL--GNLVHLNSIAMEGNQLIGTVPPEIGWL-----KNLQSLYLNSNFLHGYIPSSLGNLTML 296 (869)
Q Consensus 224 L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L 296 (869)
|++|+|++|.+++.+|..+ ..+++|++|++++|++.+. |..++.+ ++|++|+|++|++++..|..|.++++|
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 5555555555554444443 4455555555555555433 4444433 455555555555554444455555555
Q ss_pred cceeccccccccc--CCcCc--cCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccc
Q 002897 297 TLLALEINNLQGK--IPSSL--GNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQL 372 (869)
Q Consensus 297 ~~L~l~~n~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L 372 (869)
++|++++|++.+. .+..+ ..+++|++|++++|++++ ++ ......+.++++|++|
T Consensus 176 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~---------------------~~~~~~~~~l~~L~~L 233 (312)
T 1wwl_A 176 STLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET-PS---------------------GVCSALAAARVQLQGL 233 (312)
T ss_dssp CEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC-HH---------------------HHHHHHHHTTCCCSEE
T ss_pred CEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc-hH---------------------HHHHHHHhcCCCCCEE
Confidence 5555555544322 11122 444455555554444431 00 1112334567889999
Q ss_pred ccccccccccCC-ccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccC
Q 002897 373 DISGNRFSGDIP-GTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHF 451 (869)
Q Consensus 373 ~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 451 (869)
+|++|.+++..| ..+..+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|+|
T Consensus 234 ~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 234 DLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp ECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTT
T ss_pred ECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCC
Confidence 999999987664 45667889999999999998 7787776 8899999999999865 65 88899999999999998
Q ss_pred cc
Q 002897 452 EG 453 (869)
Q Consensus 452 ~~ 453 (869)
++
T Consensus 309 ~~ 310 (312)
T 1wwl_A 309 LD 310 (312)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.4e-28 Score=260.55 Aligned_cols=255 Identities=19% Similarity=0.205 Sum_probs=203.0
Q ss_pred hhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccC-ccCCcccc-------CCCCCCEEeCcCcccCccC
Q 002897 15 VEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLG-GKIPDTLG-------QLRKLIYLNIGRNQFSGFI 86 (869)
Q Consensus 15 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~p~~~~-------~l~~L~~L~L~~n~i~~~~ 86 (869)
.++++..++|+.|++++|.+ .+|..+... |++|+|++|+++ ..+|..+. ++++|++|+|++|++++..
T Consensus 36 ~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 111 (312)
T 1wwl_A 36 VELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTA 111 (312)
T ss_dssp EEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCC
T ss_pred EEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchh
Confidence 34556778889999999998 567766654 888899999884 45666655 7889999999999998888
Q ss_pred Cccc--ccCCCCcEEECcCCcCcccCCchhhcCC-----cchhhhhccccccceeccccccCCCCCcEEEccCCcccccc
Q 002897 87 PPSI--YNISSFEFIFLQSNRFHGSLPFDMVANL-----PNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 87 p~~~--~~l~~L~~L~Ls~N~l~~~~~~~~~~~l-----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
|..+ .++++|++|+|++|++.+ +| ..+..+ ++|++|++++|++++..+..|+++++|++|+|++|++.+..
T Consensus 112 ~~~~~~~~l~~L~~L~Ls~N~l~~-~~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 112 PPPLLEATGPDLNILNLRNVSWAT-RD-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp CCCSSSCCSCCCSEEEEESCBCSS-SS-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred HHHHHHhcCCCccEEEccCCCCcc-hh-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 8876 888999999999999884 45 556666 88999999999998888889999999999999999876531
Q ss_pred --Cc--CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCCh-hhhhccccceEEEecCCcc
Q 002897 160 --SI--NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPH-SLANLSNTMTTIDIGGNYF 234 (869)
Q Consensus 160 --~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~~~~l~~~L~~L~l~~n~l 234 (869)
+. .+..+++|++|+|++|+++.++.. ....+..+++|++|++++|++++..|. .+..+. .|+.|+|++|.|
T Consensus 190 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l 265 (312)
T 1wwl_A 190 GLISALCPLKFPTLQVLALRNAGMETPSGV---CSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS-QLNSLNLSFTGL 265 (312)
T ss_dssp HHHHHSCTTSCTTCCEEECTTSCCCCHHHH---HHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT-TCCEEECTTSCC
T ss_pred HHHHHHHhccCCCCCEEECCCCcCcchHHH---HHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC-CCCEEECCCCcc
Confidence 22 348889999999999998854321 112456789999999999999887753 444454 499999999999
Q ss_pred cccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccC
Q 002897 235 SGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHG 284 (869)
Q Consensus 235 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 284 (869)
+ .+|..+. ++|++|++++|++.+. |. +..+++|++|+|++|++++
T Consensus 266 ~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 266 K-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp S-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred C-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8 7777776 8999999999999865 65 8899999999999999875
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=9.8e-28 Score=271.39 Aligned_cols=237 Identities=16% Similarity=0.223 Sum_probs=164.5
Q ss_pred CCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEE
Q 002897 196 CSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSL 275 (869)
Q Consensus 196 l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 275 (869)
+++|++|+|++|.+++..|..|..+++ |+.|+|++|.+++..| |..+++|++|+|++|.+.+..+ .++|++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTK-LELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTT-CCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCC-CCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 347788888888887766777777765 8888888888776554 7788888888888888875432 2788888
Q ss_pred EccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcc
Q 002897 276 YLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLL 355 (869)
Q Consensus 276 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l 355 (869)
++++|.+++..+.. +++|+.|++++|++++..|..|+.+++|+.|+|++|++++..|..+....+.++.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 88888888666543 467888888888888777778888888888888888887655555554445556666666666
Q ss_pred cCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCccc-CCCccc
Q 002897 356 SGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLS-GQIPKY 434 (869)
Q Consensus 356 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~ 434 (869)
++. | .+..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++. +.+|..
T Consensus 182 ~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 643 2 23346667777777777764 3334666677777777777776 35666666677777777777666 455666
Q ss_pred cccccccCeeccc
Q 002897 435 LENLSFLEYLNLS 447 (869)
Q Consensus 435 ~~~l~~L~~l~l~ 447 (869)
+..++.|+.++++
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 6666666666665
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.2e-27 Score=270.64 Aligned_cols=234 Identities=18% Similarity=0.239 Sum_probs=138.5
Q ss_pred CcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECc
Q 002897 23 KLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 23 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 102 (869)
+|++|+|++|.|++..|.+|..+++|++|+|++|.|++..| |+.+++|++|+|++|.|++.. ..++|++|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 56666666666665555666666666666666666664433 666666666666666665332 22566666666
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCcc-CCCCCCEEEccCccCCC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFN-SLKNLSVLILGNNHLGN 181 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~l~~n~l~~ 181 (869)
+|.+. .++. ..+++|+.|++++|.+++..|..|+.+++|++|+|++|.+++..+..|. .+++|++|+|++|.++.
T Consensus 108 ~N~l~-~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNIS-RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCC-CEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCC-CCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 66665 3332 1234455555555555544444555555555555555555544444443 34444444444444443
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++. +..+++ |+.|+|++|.+++. |..+..+++|+.|+|++|.+.+
T Consensus 184 ~~~--------~~~l~~-------------------------L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~- 228 (487)
T 3oja_A 184 VKG--------QVVFAK-------------------------LKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL- 228 (487)
T ss_dssp EEC--------CCCCTT-------------------------CCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-
T ss_pred ccc--------cccCCC-------------------------CCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-
Confidence 321 122333 56666666666543 3346677777777777777774
Q ss_pred CCccccCCCCCCEEEccCcccc-CcCCCCCCCCccccceecc
Q 002897 262 VPPEIGWLKNLQSLYLNSNFLH-GYIPSSLGNLTMLTLLALE 302 (869)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~ 302 (869)
+|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 229 lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5666777888888888888887 5666777888888888886
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.6e-26 Score=240.51 Aligned_cols=225 Identities=21% Similarity=0.259 Sum_probs=143.6
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
.+..+.+++ +||..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++..+.+|+++++|++|+|++|+
T Consensus 12 ~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 355667777 7887664 578888888888886666678888888888888888887767778888888888888888
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhcccccccee-ccccccCCCCCcEEEccCCccccccC
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF-LPISLSNASNLELLELRDNQFIGKMS 160 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~L~~N~i~~~~~ 160 (869)
+++..+..|.++++|++|++++|.+. .++...+..+++|++|++++|.++.. +|..|.++++|++|+|++|+++++.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCccChhhhcCCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 88777777788888888888888776 44433445555555555555555432 24444445555555555554444444
Q ss_pred cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCc-EEEccCCCCCCCCChhhhhccccceEEEecCCcccccCC
Q 002897 161 INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLE-NLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIP 239 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~ 239 (869)
..|..+++|+ .|. +|++++|++++..+..+... +|+.|++++|.+++..+
T Consensus 167 ~~~~~l~~L~---------------------------~l~l~L~ls~n~l~~~~~~~~~~~--~L~~L~L~~n~l~~~~~ 217 (276)
T 2z62_A 167 TDLRVLHQMP---------------------------LLNLSLDLSLNPMNFIQPGAFKEI--RLKELALDTNQLKSVPD 217 (276)
T ss_dssp GGGHHHHTCT---------------------------TCCEEEECCSSCCCEECTTSSCSC--CEEEEECCSSCCSCCCT
T ss_pred HHhhhhhhcc---------------------------ccceeeecCCCcccccCccccCCC--cccEEECCCCceeecCH
Confidence 3333333333 222 55666666654444333332 26677777777665555
Q ss_pred ccccCCCCCCeeecccCccee
Q 002897 240 PGLGNLVHLNSIAMEGNQLIG 260 (869)
Q Consensus 240 ~~~~~l~~L~~L~l~~n~l~~ 260 (869)
..|..+++|+.|++++|++..
T Consensus 218 ~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 218 GIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp TTTTTCCSCCEEECCSSCBCC
T ss_pred hHhcccccccEEEccCCcccc
Confidence 556777777777777777763
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.3e-25 Score=235.22 Aligned_cols=228 Identities=19% Similarity=0.225 Sum_probs=166.1
Q ss_pred EEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcc
Q 002897 202 LGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNF 281 (869)
Q Consensus 202 L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 281 (869)
.+..+..++ .+|..+. .++++|++++|.+++..+..|.++++|++|++++|++.+..+..|..+++|++|+|++|.
T Consensus 12 ~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 344444444 3343322 247777777777776666677777778888888887777777777777888888888888
Q ss_pred ccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcc
Q 002897 282 LHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPS 361 (869)
Q Consensus 282 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~ 361 (869)
+++..+..|.++++|++|++++|++.+..+..+..+++|++|++++|++++. .+|.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~l~~ 143 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF------------------------KLPE 143 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC------------------------CCCG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee------------------------cCch
Confidence 7777777777788888888888877766665677777888777777777621 2466
Q ss_pred cccCCccccccccccccccccCCccccCCCCCc----EEEeeCccccCCCCccccccccccEEEccCCcccCCCcccccc
Q 002897 362 EIGNLKNLVQLDISGNRFSGDIPGTLSACTSLE----YVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLEN 437 (869)
Q Consensus 362 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~----~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 437 (869)
.+.++++|++|+|++|++++..+..+..+.+|+ .|++++|++++..+..+. ..+|+.|+|++|++++..+..+..
T Consensus 144 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~ 222 (276)
T 2z62_A 144 YFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDR 222 (276)
T ss_dssp GGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTT
T ss_pred hhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcc
Confidence 777778888888888888866666777666666 788888888855554444 347888999999988766667788
Q ss_pred ccccCeeccccccCcccCCCC
Q 002897 438 LSFLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 438 l~~L~~l~l~~N~l~~~~~~~ 458 (869)
+++|+.|++++|++++.++..
T Consensus 223 l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 223 LTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCSCCEEECCSSCBCCCTTTT
T ss_pred cccccEEEccCCcccccCCch
Confidence 889999999999988877654
No 324
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2.1e-25 Score=232.46 Aligned_cols=203 Identities=20% Similarity=0.332 Sum_probs=141.4
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.+.+.+++++++++ .+|..+. ++|++|+|++|+|+...+.+|+++++|++|+|++|+++.+.+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 34667777777777 4555443 56777777777777555566777777777777777777555556667777777777
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|++. .+|...|..+++|++|++++|.++...+..|..+++|++|+|++|.++++.+..|..+++|++|+|++|.++.
T Consensus 93 ~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 93 TDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 777776 5666666777777777777777776666677777777777777777777666667777777777777777776
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccc
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS 235 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~ 235 (869)
++.. .|..+++|++|+|++|++++..+..+..+++ |+.|+|++|.+.
T Consensus 172 ~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~~~ 218 (270)
T 2o6q_A 172 VPEG------AFDKLTELKTLKLDNNQLKRVPEGAFDSLEK-LKMLQLQENPWD 218 (270)
T ss_dssp CCTT------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTT-CCEEECCSSCBC
T ss_pred eChh------HhccCCCcCEEECCCCcCCcCCHHHhccccC-CCEEEecCCCee
Confidence 6643 4666777777777777777655555666654 777777777765
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.4e-29 Score=294.80 Aligned_cols=312 Identities=13% Similarity=0.100 Sum_probs=201.0
Q ss_pred cCChhhhhccCCcCEEeccCCcCcc---ccC------------cccccCcCCCEEEccCCccCccCCcccc-CCCCCCEE
Q 002897 12 DIPVEIGCYLFKLENLSLAENHLTG---QLP------------VSIGNLSALQVIDIRGNRLGGKIPDTLG-QLRKLIYL 75 (869)
Q Consensus 12 ~ip~~~~~~l~~L~~L~L~~n~l~~---~~~------------~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L 75 (869)
..|..++..+++|+.|+|+++.... ..| ..+..+++|++|+|++|.++...+..+. .+++|++|
T Consensus 56 ~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L 135 (594)
T 2p1m_B 56 VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVL 135 (594)
T ss_dssp SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEE
T ss_pred cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEE
Confidence 4566677788999999999876321 111 2235678999999999988876666665 68899999
Q ss_pred eCcCc-ccCcc-CCcccccCCCCcEEECcCCcCcccCCc---hhhcCCcchhhhhccccc--cce-eccccccCCCCCcE
Q 002897 76 NIGRN-QFSGF-IPPSIYNISSFEFIFLQSNRFHGSLPF---DMVANLPNLRKFVAAKNN--LTG-FLPISLSNASNLEL 147 (869)
Q Consensus 76 ~L~~n-~i~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~~l~~L~~L~l~~n~--i~~-~~~~~l~~l~~L~~ 147 (869)
+|++| .+... ++..+.++++|++|+|++|.+.+..+. .....+++|++|++++|. ++. .++..+..+++|++
T Consensus 136 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~ 215 (594)
T 2p1m_B 136 VLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKS 215 (594)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCE
T ss_pred eCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcE
Confidence 99998 55532 444555889999999999987632221 223366789999998886 321 12223345789999
Q ss_pred EEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEE-EccCCCCCCCCChhhhhccccceE
Q 002897 148 LELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENL-GLYDNQFGGLLPHSLANLSNTMTT 226 (869)
Q Consensus 148 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L-~L~~n~l~~~~~~~~~~l~~~L~~ 226 (869)
|++++|.-.+..+..+..+++|++|+++.+...-....--.+...+.++++|+.| .+.+... +.++..+..+++ |+.
T Consensus 216 L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~-L~~ 293 (594)
T 2p1m_B 216 LKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSR-LTT 293 (594)
T ss_dssp EECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTT-CCE
T ss_pred EecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhCC-CCE
Confidence 9999883222356667788899999876554210000001223357888888888 4444332 234444445554 999
Q ss_pred EEecCCcccccCC-ccccCCCCCCeeecccCcceec-CCccccCCCCCCEEEccC---------ccccCcCCCCCC-CCc
Q 002897 227 IDIGGNYFSGTIP-PGLGNLVHLNSIAMEGNQLIGT-VPPEIGWLKNLQSLYLNS---------NFLHGYIPSSLG-NLT 294 (869)
Q Consensus 227 L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~---------N~l~~~~~~~~~-~l~ 294 (869)
|+|++|.+++... ..+..+++|++|++++| +... ++.....+++|++|++++ +.+++.....+. +++
T Consensus 294 L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~ 372 (594)
T 2p1m_B 294 LNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCP 372 (594)
T ss_dssp EECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCT
T ss_pred EEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhch
Confidence 9999988764332 23567889999999888 4322 222233578899998843 344432222222 367
Q ss_pred cccceecccccccccCCcCcc-Cccccceeecc
Q 002897 295 MLTLLALEINNLQGKIPSSLG-NCTSLIMLTLS 326 (869)
Q Consensus 295 ~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~ 326 (869)
+|+.|.++.|.++......+. .+++|+.|+++
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 788888877877755444454 47788888887
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.7e-29 Score=292.32 Aligned_cols=414 Identities=14% Similarity=0.115 Sum_probs=239.7
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCc---cCCcc------------ccCCCCCCEEeCcCcccCccCCcc
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGG---KIPDT------------LGQLRKLIYLNIGRNQFSGFIPPS 89 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~---~~p~~------------~~~l~~L~~L~L~~n~i~~~~p~~ 89 (869)
+.++++..... ..+..+..+++|++|+|++|.... ..|.. +..+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 35555544433 333456788899999999875221 22211 245778888888888887666666
Q ss_pred cc-cCCCCcEEECcCC-cCcccCCchhhcCCcchhhhhccccccceecccccc----CCCCCcEEEccCCccccccCcC-
Q 002897 90 IY-NISSFEFIFLQSN-RFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLS----NASNLELLELRDNQFIGKMSIN- 162 (869)
Q Consensus 90 ~~-~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~----~l~~L~~L~L~~N~i~~~~~~~- 162 (869)
+. .+++|++|+|++| .+........+.++++|++|++++|.+++..+..+. .+++|++|++++|. ..+....
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l 203 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSAL 203 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHH
Confidence 65 6788888888888 444221223445678888888888877654433333 56678888887775 2122222
Q ss_pred ---ccCCCCCCEEEccCc-cCCCCCCCCcchhhhccCCCCCcEEEccCCC-------CCCCCChhhhhccccceEE-Eec
Q 002897 163 ---FNSLKNLSVLILGNN-HLGNRAANDLDFVTVLANCSKLENLGLYDNQ-------FGGLLPHSLANLSNTMTTI-DIG 230 (869)
Q Consensus 163 ---~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~~L~~L-~l~ 230 (869)
+..+++|++|++++| .++ .++..+..+++|++|+++.+. +.+ ++..+.++.+ |+.| .+.
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~-------~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~-L~~Ls~~~ 274 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLE-------KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKE-LRCLSGFW 274 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHH-------HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTT-CCEEECCB
T ss_pred HHHHHhCCCCcEEecCCCCcHH-------HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCC-cccccCCc
Confidence 234577888888777 222 134456677777777755443 221 2234555554 6666 333
Q ss_pred CCcccccCCccccCCCCCCeeecccCcceecCC-ccccCCCCCCEEEccCccccCc-CCCCCCCCccccceecc------
Q 002897 231 GNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVP-PEIGWLKNLQSLYLNSNFLHGY-IPSSLGNLTMLTLLALE------ 302 (869)
Q Consensus 231 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~------ 302 (869)
+.... .++..+..+++|++|++++|.+..... ..+..+++|++|++++| ++.. .+.....+++|+.|++.
T Consensus 275 ~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g 352 (594)
T 2p1m_B 275 DAVPA-YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFV 352 (594)
T ss_dssp TCCGG-GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTC
T ss_pred ccchh-hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccc
Confidence 33222 334444466777777777777553322 22456777777777777 3321 11112246677777773
Q ss_pred ---cccccccCCcCcc-CccccceeeccCcccCCCCCccccccccccceeccc--C----CcccCCC-----cccccCCc
Q 002897 303 ---INNLQGKIPSSLG-NCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLS--D----NLLSGSL-----PSEIGNLK 367 (869)
Q Consensus 303 ---~n~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~--~----N~l~~~~-----p~~~~~l~ 367 (869)
.+.++......+. .+++|+.|.++.|++++.....+....+.++.|+++ + |.+++.. +..+.+++
T Consensus 353 ~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~ 432 (594)
T 2p1m_B 353 MEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCK 432 (594)
T ss_dssp SSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCT
T ss_pred cccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCC
Confidence 2344432222232 367777777777777643333333334556667777 3 4554211 11255666
Q ss_pred cccccccccccccccCCccccC-CCCCcEEEeeCccccCCCCccc-cccccccEEEccCCcccCCCcc-ccccccccCee
Q 002897 368 NLVQLDISGNRFSGDIPGTLSA-CTSLEYVKMQDNSFSGSIPPSL-NFLKSIKVLDLSSNKLSGQIPK-YLENLSFLEYL 444 (869)
Q Consensus 368 ~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~l 444 (869)
+|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|+|++|++++..+. .+..+++|+.|
T Consensus 433 ~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L 511 (594)
T 2p1m_B 433 DLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSL 511 (594)
T ss_dssp TCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEE
T ss_pred CccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEE
Confidence 777777766 555444444544 6777777777777764444444 4567777777777777543332 33446777777
Q ss_pred ccccccCc
Q 002897 445 NLSYNHFE 452 (869)
Q Consensus 445 ~l~~N~l~ 452 (869)
++++|+++
T Consensus 512 ~l~~~~~~ 519 (594)
T 2p1m_B 512 WMSSCSVS 519 (594)
T ss_dssp EEESSCCB
T ss_pred eeeCCCCC
Confidence 77777763
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.5e-24 Score=226.16 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=101.3
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ .||..++ .++++|+|++|+|+++.+.+|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|+
T Consensus 21 l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 21 VDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp EECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC
T ss_pred EEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc
Confidence 345555555 4554443 345555555555554444455555555555555555554444444555555555555555
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
+++..+..|.++++|++|+|++|++. .++...|..+++|++|++++|.++...+..|..+++|++|+|++|+++.+.+.
T Consensus 97 l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 97 LQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred CCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChh
Confidence 55444444555555555555555554 44444455555555555555555544444455555555555555555555444
Q ss_pred CccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
.|..+++|++|+|++|+++.++.. .|..+++|+.|+|++|.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEG------AFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTT------TTTTCTTCCEEECCSSCBC
T ss_pred HhccCCCcCEEECCCCcCCcCCHH------HhccccCCCEEEecCCCee
Confidence 455555555555555555544432 3444555555555555544
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.7e-24 Score=225.79 Aligned_cols=202 Identities=22% Similarity=0.222 Sum_probs=148.4
Q ss_pred CCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCC
Q 002897 117 NLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANC 196 (869)
Q Consensus 117 ~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l 196 (869)
.+..+..+.+.++.+... ..+..+++|+.|++++|.+..+ ..+..+++|++|++++|.++.++ .+..+
T Consensus 17 ~~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~~--------~l~~l 84 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDIS--------ALKEL 84 (272)
T ss_dssp HHHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCCG--------GGTTC
T ss_pred hHHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCch--------hhcCC
Confidence 345677888888888754 4566788999999999988754 35788889999999998887643 47788
Q ss_pred CCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEE
Q 002897 197 SKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLY 276 (869)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 276 (869)
++|++|++++|++++..+..+..+++ |++|++++|.+++..+..|..+++|++|++++|++.+..+..++.+++|++|+
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTN-LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTT-CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccChhHhcCCcC-CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 88888888888888766666666665 77777777777766666677777777777777777766666667777777777
Q ss_pred ccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccC
Q 002897 277 LNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLD 331 (869)
Q Consensus 277 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 331 (869)
+++|++++..+..|.++++|+.|++++|++++..+..|..+++|+.|++++|.+.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 218 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc
Confidence 7777777666666677777777777777777666666667777777777766665
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.1e-24 Score=227.12 Aligned_cols=229 Identities=21% Similarity=0.319 Sum_probs=165.5
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.++..+++..+.++... .+..+++|++|++++|.++ .++ .++.+++|++|+|++|.+.+. ..+.++++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 35566667776666432 3566777777777777776 333 467777777777777777642 36777777777777
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|.+. .++...|.++++|++|++++|++++..+..|..+++|++|++++|+++++.+..|..+++|++|++++|+++.
T Consensus 93 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 93 TGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 777776 5665667777777777777777776666677778888888888888777777777778888888888888777
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++.. .+..+++|++|++++|++++..+..+..+++ |+.|++++|.+.+ .++.|+.|++..|.+.+.
T Consensus 172 ~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ 237 (272)
T 3rfs_A 172 LPEG------VFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS-LQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 237 (272)
T ss_dssp CCTT------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTT-CCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGG
T ss_pred cCHH------HhcCCccCCEEECCCCcCCccCHHHHhCCcC-CCEEEccCCCccc-------cCcHHHHHHHHHHhCCCc
Confidence 6643 4677788888888888888777766777765 8888888887763 345688888888888888
Q ss_pred CCccccCCCC
Q 002897 262 VPPEIGWLKN 271 (869)
Q Consensus 262 ~~~~~~~l~~ 271 (869)
+|.+++.++.
T Consensus 238 ip~~~~~~~~ 247 (272)
T 3rfs_A 238 VRNSAGSVAP 247 (272)
T ss_dssp BBCTTSCBCG
T ss_pred ccCcccccCC
Confidence 8888776654
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.1e-24 Score=228.91 Aligned_cols=199 Identities=24% Similarity=0.270 Sum_probs=100.1
Q ss_pred ceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceeccc
Q 002897 224 MTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEI 303 (869)
Q Consensus 224 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 303 (869)
++++++++|.++ .+|..+. ++++.|++++|.+.+..+..|..+++|++|+|++|.+++..+. ..+++|++|++++
T Consensus 12 l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~ 86 (290)
T 1p9a_G 12 HLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSH 86 (290)
T ss_dssp CCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCS
T ss_pred ccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCC
Confidence 555555555555 3333332 3445555555555544444455555555555555555432221 3444444444444
Q ss_pred ccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccC
Q 002897 304 NNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDI 383 (869)
Q Consensus 304 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 383 (869)
|+++ .+|..+..+++|++|++++|+++ +..|..|.++++|++|+|++|++++..
T Consensus 87 N~l~-~l~~~~~~l~~L~~L~l~~N~l~-------------------------~l~~~~~~~l~~L~~L~L~~N~l~~~~ 140 (290)
T 1p9a_G 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLT-------------------------SLPLGALRGLGELQELYLKGNELKTLP 140 (290)
T ss_dssp SCCS-SCCCCTTTCTTCCEEECCSSCCC-------------------------CCCSSTTTTCTTCCEEECTTSCCCCCC
T ss_pred CcCC-cCchhhccCCCCCEEECCCCcCc-------------------------ccCHHHHcCCCCCCEEECCCCCCCccC
Confidence 4444 33444444444444444444443 233344555556666666666665544
Q ss_pred CccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCccc
Q 002897 384 PGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGE 454 (869)
Q Consensus 384 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~ 454 (869)
+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.+++++|++.+.
T Consensus 141 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 141 PGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred hhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 455555666666666666665433344555566666666666655 4555555555555555555555443
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.7e-24 Score=225.95 Aligned_cols=203 Identities=21% Similarity=0.226 Sum_probs=167.4
Q ss_pred hhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCc
Q 002897 18 GCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFE 97 (869)
Q Consensus 18 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~ 97 (869)
...+++++.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 346788888888888888 5665553 6888888888888877788888888888888888888865332 7788888
Q ss_pred EEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCc
Q 002897 98 FIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNN 177 (869)
Q Consensus 98 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n 177 (869)
+|+|++|++. .+|. .+..+++|++|++++|+|+...+..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~-~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCC-CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCch-hhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888887 7774 5778888888899999888877788889999999999999998888888888999999999999
Q ss_pred cCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccc
Q 002897 178 HLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS 235 (869)
Q Consensus 178 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~ 235 (869)
+++.++.. .|..+++|++|+|++|+++ .+|..+..... |+.|+|++|.+.
T Consensus 159 ~l~~l~~~------~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~-L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAG------LLNGLENLDTLLLQENSLY-TIPKGFFGSHL-LPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTT------TTTTCTTCCEEECCSSCCC-CCCTTTTTTCC-CSEEECCSCCBC
T ss_pred cCCccCHH------HhcCcCCCCEEECCCCcCC-ccChhhccccc-CCeEEeCCCCcc
Confidence 99888764 5778889999999999998 56766776664 899999999876
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=1.6e-24 Score=221.48 Aligned_cols=188 Identities=17% Similarity=0.216 Sum_probs=112.9
Q ss_pred cccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCc-cCccCCccccCCCCCCEEeCcC-cccCcc
Q 002897 8 KLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNR-LGGKIPDTLGQLRKLIYLNIGR-NQFSGF 85 (869)
Q Consensus 8 ~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~~~p~~~~~l~~L~~L~L~~-n~i~~~ 85 (869)
+++ +||. +. .+|++|+|++|+|+++.+..|.++++|++|+|++|+ ++.+.+.+|+++++|++|+|++ |+++++
T Consensus 22 ~l~-~ip~-~~---~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i 96 (239)
T 2xwt_C 22 DIQ-RIPS-LP---PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYI 96 (239)
T ss_dssp SCS-SCCC-CC---TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEE
T ss_pred Ccc-ccCC-CC---CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEc
Confidence 366 6776 43 467777777777776666677777777777777776 7666666777777777777777 777766
Q ss_pred CCcccccCCCCcEEECcCCcCcccCCchhhcCCcchh---hhhcccc-ccceeccccccCCCCCc-EEEccCCccccccC
Q 002897 86 IPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLR---KFVAAKN-NLTGFLPISLSNASNLE-LLELRDNQFIGKMS 160 (869)
Q Consensus 86 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~---~L~l~~n-~i~~~~~~~l~~l~~L~-~L~L~~N~i~~~~~ 160 (869)
.+..|.++++|++|+|++|+++ .+|. |..+++|+ .|++++| +++.+.+..|.++++|+ +|++++|+++.+.+
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~-~lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~ 173 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLK-MFPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQG 173 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCC-SCCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECT
T ss_pred CHHHhCCCCCCCEEeCCCCCCc-cccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCH
Confidence 6667777777777777777776 4553 55555554 5555555 55554444555555555 55555555554444
Q ss_pred cCccCCCCCCEEEccCcc-CCCCCCCCcchhhhccCC-CCCcEEEccCCCCC
Q 002897 161 INFNSLKNLSVLILGNNH-LGNRAANDLDFVTVLANC-SKLENLGLYDNQFG 210 (869)
Q Consensus 161 ~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~l~~l-~~L~~L~L~~n~l~ 210 (869)
..|.. ++|++|++++|+ ++.++.. .|..+ ++|++|++++|+++
T Consensus 174 ~~~~~-~~L~~L~L~~n~~l~~i~~~------~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 174 YAFNG-TKLDAVYLNKNKYLTVIDKD------AFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TTTTT-CEEEEEECTTCTTCCEECTT------TTTTCSBCCSEEECTTCCCC
T ss_pred hhcCC-CCCCEEEcCCCCCcccCCHH------HhhccccCCcEEECCCCccc
Confidence 44443 445555555552 4444332 23444 44444444444444
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=2.2e-25 Score=243.04 Aligned_cols=260 Identities=19% Similarity=0.220 Sum_probs=135.8
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccC----cccccCc-CCCEEEccCCccCccCCccccCC-----CC
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLP----VSIGNLS-ALQVIDIRGNRLGGKIPDTLGQL-----RK 71 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l-----~~ 71 (869)
++++.|+++|.+|..+. ..++|++|+|++|.|++..+ +.|..++ +|++|+|++|+|+...+..|..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35666666665555442 34446777777776665444 5566666 66666666666665555555554 66
Q ss_pred CCEEeCcCcccCccCCccccc----C-CCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccC-CCCC
Q 002897 72 LIYLNIGRNQFSGFIPPSIYN----I-SSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSN-ASNL 145 (869)
Q Consensus 72 L~~L~L~~n~i~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~-l~~L 145 (869)
|++|+|++|++++..+..+.. + ++|++|+|++|++. ..+...+. ..+.. .++|
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~--------------------~~l~~~~~~L 140 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS-SKSSSEFK--------------------QAFSNLPASI 140 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-GSCHHHHH--------------------HHHTTSCTTC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC-cHHHHHHH--------------------HHHHhCCCce
Confidence 666666666666555443333 2 56666666666665 33322211 11222 2355
Q ss_pred cEEEccCCccccccCcC----ccCCC-CCCEEEccCccCCCCCCCCcchhhhccCC-CCCcEEEccCCCCCCC----CCh
Q 002897 146 ELLELRDNQFIGKMSIN----FNSLK-NLSVLILGNNHLGNRAANDLDFVTVLANC-SKLENLGLYDNQFGGL----LPH 215 (869)
Q Consensus 146 ~~L~L~~N~i~~~~~~~----~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l-~~L~~L~L~~n~l~~~----~~~ 215 (869)
++|+|++|.++...... +..++ +|++|+|++|+++..... .+...+..+ ++|++|+|++|++++. ++.
T Consensus 141 ~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 141 TSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCA--ELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred eEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHH--HHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 55555555554322221 22333 555555555555544322 222334444 3666666666666542 223
Q ss_pred hhhhccccceEEEecCCcccccCC----ccccCCCCCCeeecccCcceec-------CCccccCCCCCCEEEccCccccC
Q 002897 216 SLANLSNTMTTIDIGGNYFSGTIP----PGLGNLVHLNSIAMEGNQLIGT-------VPPEIGWLKNLQSLYLNSNFLHG 284 (869)
Q Consensus 216 ~~~~l~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~-------~~~~~~~l~~L~~L~L~~N~l~~ 284 (869)
.+.....+|++|+|++|.+++..+ ..+..+++|+.|++++|.+... ++..+..+++|+.|++++|.+..
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 333333235666666665554322 2234556666666666663322 22344556666666666666654
Q ss_pred c
Q 002897 285 Y 285 (869)
Q Consensus 285 ~ 285 (869)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 3
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=3.2e-25 Score=252.61 Aligned_cols=193 Identities=17% Similarity=0.159 Sum_probs=142.1
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeeccc--------chhhHHHHHHHHHHHhCCCCccceEEEEeeccccC
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQ--------KGALKSFLTECEALRSIRHRNLIKIITICSSIDFN 626 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 626 (869)
.+...++||+|+||+||+|.. .++.+|+|+..... ....+++.+|++++++++||||+++..++...
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--- 411 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL--- 411 (540)
T ss_dssp -----------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET---
T ss_pred cCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC---
Confidence 335567999999999999955 78899999864221 11235689999999999999999444443322
Q ss_pred CCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 002897 627 GVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHV 706 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 706 (869)
+..++||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+|||++. .+||
T Consensus 412 --~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL 470 (540)
T 3en9_A 412 --DNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYI 470 (540)
T ss_dssp --TTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEE
T ss_pred --CccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEE
Confidence 456999999999999999875 458899999999999999 9999999999999998 9999
Q ss_pred ccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC--CCCCccccchhhhHHHHHHHcCCCCCC
Q 002897 707 GDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG--SEASMTGDVYSFGILLLEMFSRRRPTD 774 (869)
Q Consensus 707 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~il~el~tg~~pf~ 774 (869)
+|||+|+.......... ..........||+.|+|||++.. ..|+..+|+|+...-..+-+.++.+|.
T Consensus 471 ~DFGla~~~~~~~~~~~-~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 471 IDFGLGKISNLDEDKAV-DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCTTCEECCCHHHHHH-HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred EECccCEECCCcccccc-chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 99999987654210000 00001134579999999999876 457888999999998888888877763
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.3e-25 Score=241.57 Aligned_cols=263 Identities=19% Similarity=0.229 Sum_probs=193.4
Q ss_pred EEeccCCcCccccCcccccCcCCCEEEccCCccCccCC----ccccCCC-CCCEEeCcCcccCccCCcccccC-----CC
Q 002897 26 NLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIP----DTLGQLR-KLIYLNIGRNQFSGFIPPSIYNI-----SS 95 (869)
Q Consensus 26 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p----~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l-----~~ 95 (869)
.++|++|++++.+|..+...++|++|+|++|+|+...+ .+|.+++ +|++|+|++|+|.+..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788899998888777777779999999999986666 6788888 89999999999987777777775 88
Q ss_pred CcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCC-CCCcEEEccCCccccccCcCcc----C-CCCC
Q 002897 96 FEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNA-SNLELLELRDNQFIGKMSINFN----S-LKNL 169 (869)
Q Consensus 96 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l-~~L~~L~L~~N~i~~~~~~~~~----~-l~~L 169 (869)
|++|+|++|++.+..+ .. +...+..+ ++|++|+|++|+++...+..+. . .++|
T Consensus 82 L~~L~Ls~n~l~~~~~-~~--------------------l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 140 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSS-DE--------------------LVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASI 140 (362)
T ss_dssp CCEEECCSSCGGGSCH-HH--------------------HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTC
T ss_pred ccEEECcCCcCChHHH-HH--------------------HHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCce
Confidence 8888888888863222 21 11234445 7899999999998776665543 3 3699
Q ss_pred CEEEccCccCCCCCCCCcchhhhccCCC-CCcEEEccCCCCCCCCChhhhhc----cccceEEEecCCccccc----CCc
Q 002897 170 SVLILGNNHLGNRAANDLDFVTVLANCS-KLENLGLYDNQFGGLLPHSLANL----SNTMTTIDIGGNYFSGT----IPP 240 (869)
Q Consensus 170 ~~L~l~~n~l~~~~~~~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~~~~l----~~~L~~L~l~~n~l~~~----~~~ 240 (869)
++|+|++|.++..... .++..+..++ +|++|+|++|++++..+..+... +.+|++|||++|.|++. ++.
T Consensus 141 ~~L~Ls~N~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 141 TSLNLRGNDLGIKSSD--ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp CEEECTTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred eEEEccCCcCCHHHHH--HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 9999999999865543 3445566666 99999999999987777655543 22499999999998853 344
Q ss_pred cccC-CCCCCeeecccCcceecCC----ccccCCCCCCEEEccCccccCc-------CCCCCCCCccccceecccccccc
Q 002897 241 GLGN-LVHLNSIAMEGNQLIGTVP----PEIGWLKNLQSLYLNSNFLHGY-------IPSSLGNLTMLTLLALEINNLQG 308 (869)
Q Consensus 241 ~~~~-l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~-------~~~~~~~l~~L~~L~l~~n~l~~ 308 (869)
.+.. .++|++|+|++|.+....+ ..+..+++|++|+|++|.+.+. ++..+.++++|+.|++++|++..
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 5554 4588888898888876544 3346678888888888885432 33466778888888888888775
Q ss_pred cCC
Q 002897 309 KIP 311 (869)
Q Consensus 309 ~~~ 311 (869)
..+
T Consensus 299 ~~~ 301 (362)
T 3goz_A 299 SHS 301 (362)
T ss_dssp GGC
T ss_pred cch
Confidence 433
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=2.1e-23 Score=214.84 Aligned_cols=181 Identities=23% Similarity=0.328 Sum_probs=142.8
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.+.++++++++.++ .+|..+. ++|++|+|++|+|++..+.+|+++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45677788888777 5665554 57788888888887777777778888888888888887777777777888888888
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|++. .+|...|..+++|++|++++|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+++.
T Consensus 91 ~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 169 (251)
T 3m19_A 91 ANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS 169 (251)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc
Confidence 888876 6666777778888888888888887777778888888888888888888877788888888888888888887
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCC
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGL 212 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 212 (869)
++.. .|..+++|++|+|++|.+...
T Consensus 170 ~~~~------~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 170 VPHG------AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTT------TTTTCTTCCEEECCSCCBCTT
T ss_pred cCHH------HHhCCCCCCEEEeeCCceeCC
Confidence 7654 577888888999999888754
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=6.5e-24 Score=217.00 Aligned_cols=206 Identities=16% Similarity=0.246 Sum_probs=127.6
Q ss_pred cCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc-cCccCCcccccCCCCcEEECcC-CcCcccC
Q 002897 33 HLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ-FSGFIPPSIYNISSFEFIFLQS-NRFHGSL 110 (869)
Q Consensus 33 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~-i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~ 110 (869)
.++ .+|. +. .+|++|+|++|+|+++.+.+|+++++|++|+|++|+ ++++.+..|.++++|++|+|++ |++. .+
T Consensus 22 ~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i 96 (239)
T 2xwt_C 22 DIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YI 96 (239)
T ss_dssp SCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EE
T ss_pred Ccc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-Ec
Confidence 355 5555 43 378888888888887666678888888888888886 7766666777777888887777 7776 55
Q ss_pred CchhhcCCcchhhhhccccccceeccccccCCCCCc---EEEccCC-ccccccCcCccCCCCCC-EEEccCccCCCCCCC
Q 002897 111 PFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLE---LLELRDN-QFIGKMSINFNSLKNLS-VLILGNNHLGNRAAN 185 (869)
Q Consensus 111 ~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~---~L~L~~N-~i~~~~~~~~~~l~~L~-~L~l~~n~l~~~~~~ 185 (869)
|...|.++++|++|++++|.+++ +|. |..+++|+ +|++++| .++.+.+..|.++++|+ +|++++|+++.++.
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~- 173 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQG- 173 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECT-
T ss_pred CHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCH-
Confidence 55555666666666666666554 232 55555555 5555555 55554444455555555 55555444443332
Q ss_pred CcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCc-ccccCCccccCC-CCCCeeecccCcceecCC
Q 002897 186 DLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNY-FSGTIPPGLGNL-VHLNSIAMEGNQLIGTVP 263 (869)
Q Consensus 186 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~ 263 (869)
..+.. . .|+.|++++|. +++..+..|..+ ++|+.|++++|++.+. |
T Consensus 174 -----------------------------~~~~~-~-~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~ 221 (239)
T 2xwt_C 174 -----------------------------YAFNG-T-KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-P 221 (239)
T ss_dssp -----------------------------TTTTT-C-EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-C
T ss_pred -----------------------------hhcCC-C-CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-C
Confidence 22222 2 36666666663 665555666666 7777777777777643 3
Q ss_pred ccccCCCCCCEEEccCc
Q 002897 264 PEIGWLKNLQSLYLNSN 280 (869)
Q Consensus 264 ~~~~~l~~L~~L~L~~N 280 (869)
.. .+++|+.|+++++
T Consensus 222 ~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 222 SK--GLEHLKELIARNT 236 (239)
T ss_dssp CT--TCTTCSEEECTTC
T ss_pred hh--HhccCceeeccCc
Confidence 32 4667777777765
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=223.79 Aligned_cols=229 Identities=18% Similarity=0.222 Sum_probs=166.0
Q ss_pred CCCcEEEccCCCCCCCCCh---hhhhccccceEEEecCCcccccCCccc--cCCCCCCeeecccCcceecCC----cccc
Q 002897 197 SKLENLGLYDNQFGGLLPH---SLANLSNTMTTIDIGGNYFSGTIPPGL--GNLVHLNSIAMEGNQLIGTVP----PEIG 267 (869)
Q Consensus 197 ~~L~~L~L~~n~l~~~~~~---~~~~l~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~----~~~~ 267 (869)
..++.|.+.++.++...-. .+..+.+ |++|++++|.+++..|..+ ..+++|++|++++|.+.+..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSR-LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSC-CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCc-eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 3466777777666422111 1122333 8888888888887888777 888888999999888886544 3445
Q ss_pred CCCCCCEEEccCccccCcCCCCCCCCccccceeccccccccc--C--CcCccCccccceeeccCcccCCCCCcccccccc
Q 002897 268 WLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGK--I--PSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTT 343 (869)
Q Consensus 268 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 343 (869)
.+++|++|+|++|++++..+..|.++++|++|++++|++.+. + +..+..+++|++|++++|+++ .++..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~------ 215 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGV------ 215 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHH------
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHH------
Confidence 688899999999999888888888899999999999987632 1 233467888888888888876 11110
Q ss_pred ccceecccCCcccCCCcccccCCccccccccccccccccCCccccCC---CCCcEEEeeCccccCCCCccccccccccEE
Q 002897 344 LSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSAC---TSLEYVKMQDNSFSGSIPPSLNFLKSIKVL 420 (869)
Q Consensus 344 ~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 420 (869)
.+..++++++|++|+|++|.+++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|
T Consensus 216 ---------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L 277 (310)
T 4glp_A 216 ---------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL 277 (310)
T ss_dssp ---------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE
T ss_pred ---------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE
Confidence 00124667788888888888887767777766 58888888888888 6677664 788888
Q ss_pred EccCCcccCCCccccccccccCeeccccccCcc
Q 002897 421 DLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEG 453 (869)
Q Consensus 421 ~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~ 453 (869)
+|++|+|++. |. +..+++|+.|++++|+|+.
T Consensus 278 ~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 278 DLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred ECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 8888888854 43 6778888888888888864
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=1.6e-23 Score=227.07 Aligned_cols=240 Identities=19% Similarity=0.198 Sum_probs=131.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccC-CccccCCCCCCE-EeCcC
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKI-PDTLGQLRKLIY-LNIGR 79 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-p~~~~~l~~L~~-L~L~~ 79 (869)
++.++++++ +||.+++ +++++|+|++|+|+.+.+.+|.++++|++|+|++|+|.+.+ +++|.++++|++ +.++.
T Consensus 14 v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 456667777 6776664 46777777777777555556777777777777777764433 356667766654 45556
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccccc
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
|+|+.+.|..|.++++|++|++++|++. .+|...+....++..|++.+ .|++..+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~l~~l~l~~-----------------------~~~i~~l~ 145 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQD-----------------------NINIHTIE 145 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTTCCBSSCEEEEEES-----------------------CTTCCEEC
T ss_pred CcccccCchhhhhccccccccccccccc-cCCchhhcccchhhhhhhcc-----------------------cccccccc
Confidence 6777666666777777777777777765 44444444444444444433 13344444
Q ss_pred CcCccCCC-CCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccC-CCCCCCCChhhhhccccceEEEecCCccccc
Q 002897 160 SINFNSLK-NLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYD-NQFGGLLPHSLANLSNTMTTIDIGGNYFSGT 237 (869)
Q Consensus 160 ~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 237 (869)
+..|..+. .++.|+|++|+|+.++.. .....+|++|++++ |.++.+.+..|..+.+ |+.|||++|+|+..
T Consensus 146 ~~~f~~~~~~l~~L~L~~N~i~~i~~~-------~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~-L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 146 RNSFVGLSFESVILWLNKNGIQEIHNS-------AFNGTQLDELNLSDNNNLEELPNDVFHGASG-PVILDISRTRIHSL 217 (350)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTT-------SSTTEEEEEEECTTCTTCCCCCTTTTTTEEC-CSEEECTTSCCCCC
T ss_pred ccchhhcchhhhhhccccccccCCChh-------hccccchhHHhhccCCcccCCCHHHhccCcc-cchhhcCCCCcCcc
Confidence 44444432 344455555555444432 11233455555542 3444333334445543 55666666655533
Q ss_pred CCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcc
Q 002897 238 IPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNF 281 (869)
Q Consensus 238 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 281 (869)
.+..|.++++|+.+++ +.+. .+| .+..+++|+.+++.++.
T Consensus 218 p~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 218 PSYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CSSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred ChhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 3333444443333332 2222 445 36677788888877653
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=9.5e-23 Score=209.89 Aligned_cols=176 Identities=22% Similarity=0.301 Sum_probs=147.9
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ ++|..++ .+++.|+|++|++++..+.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 19 l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 19 VDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp EECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 678888888 8888775 578888888888887777788888888888888888888777788888888888888888
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
|++..+..|.++++|++|+|++|++. .+|...|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+++++.+.
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 88777778888888888888888887 77777788888888888888888877777888888888888888888888887
Q ss_pred CccCCCCCCEEEccCccCCCC
Q 002897 162 NFNSLKNLSVLILGNNHLGNR 182 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~ 182 (869)
.|..+++|+.|+|++|.+...
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTT
T ss_pred HHhCCCCCCEEEeeCCceeCC
Confidence 888888888888888888654
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9.6e-24 Score=224.80 Aligned_cols=229 Identities=14% Similarity=0.210 Sum_probs=170.1
Q ss_pred CCcCEEeccCCcCcccc-C--cccccCcCCCEEEccCCccCccCCccc--cCCCCCCEEeCcCcccCccCC----ccccc
Q 002897 22 FKLENLSLAENHLTGQL-P--VSIGNLSALQVIDIRGNRLGGKIPDTL--GQLRKLIYLNIGRNQFSGFIP----PSIYN 92 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~-~--~~~~~l~~L~~L~L~~n~i~~~~p~~~--~~l~~L~~L~L~~n~i~~~~p----~~~~~ 92 (869)
..++.|.+.++.++... . ..+..+++|++|+|++|++.+..|..+ +.+++|++|+|++|++.+..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 45788888888776211 1 112345678899999998888888887 888889999999998886555 44567
Q ss_pred CCCCcEEECcCCcCcccCCchhhcCCcchhhhhcccccccee---c-cccccCCCCCcEEEccCCccccccCc---CccC
Q 002897 93 ISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF---L-PISLSNASNLELLELRDNQFIGKMSI---NFNS 165 (869)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~---~-~~~l~~l~~L~~L~L~~N~i~~~~~~---~~~~ 165 (869)
+++|++|+|++|++. .++...|..+++|++|++++|++.+. . +..+..+++|++|+|++|+++.+... .+..
T Consensus 144 ~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 888899999999887 66667788888899999998887542 2 23457888899999999988643322 3567
Q ss_pred CCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCC
Q 002897 166 LKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNL 245 (869)
Q Consensus 166 l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l 245 (869)
+++|++|+|++|+++...+..+ ..+..+++|++|+|++|+++ .+|..+. ..|+.|+|++|.|++. |. +..+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~---~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l 293 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSA---PRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDEL 293 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCC---SSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSC-CC-TTSC
T ss_pred CCCCCEEECCCCCCCccchhhH---HhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCC-ch-hhhC
Confidence 8899999999999887733211 12333478999999999998 5566554 3599999999999854 43 6788
Q ss_pred CCCCeeecccCccee
Q 002897 246 VHLNSIAMEGNQLIG 260 (869)
Q Consensus 246 ~~L~~L~l~~n~l~~ 260 (869)
++|+.|++++|++..
T Consensus 294 ~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 294 PEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSCEECSSTTTSC
T ss_pred CCccEEECcCCCCCC
Confidence 999999999999863
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=5.2e-23 Score=223.00 Aligned_cols=243 Identities=19% Similarity=0.183 Sum_probs=138.3
Q ss_pred CEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhh-hhcc
Q 002897 49 QVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRK-FVAA 127 (869)
Q Consensus 49 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~-L~l~ 127 (869)
++++.++++++ .+|..+ .++|++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+|.++|.++++|++ +.+.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 34455555555 444433 2355555555555554444455555555555555555544455555555555443 3334
Q ss_pred ccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccC-ccCCCCCCCCcchhhhccCCCCCcEEEccC
Q 002897 128 KNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGN-NHLGNRAANDLDFVTVLANCSKLENLGLYD 206 (869)
Q Consensus 128 ~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~ 206 (869)
.|+++.+.|..|..+++|++|++++|++..+.+..+....++..|++.+ |++..++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~----------------------- 145 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE----------------------- 145 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEEC-----------------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccc-----------------------
Confidence 4555555566666677777777777776666555555555555555533 3444443
Q ss_pred CCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeeccc-CcceecCCccccCCCCCCEEEccCccccCc
Q 002897 207 NQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEG-NQLIGTVPPEIGWLKNLQSLYLNSNFLHGY 285 (869)
Q Consensus 207 n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 285 (869)
+..|..+...++.|+|++|.|+. +|.......+|+.|++.+ |.+..+.+..|..+++|++|+|++|+|+.+
T Consensus 146 -------~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 146 -------RNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp -------TTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred -------ccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCcc
Confidence 33333443335556666666653 333333445667777654 555544445677777888888888888766
Q ss_pred CCCCCCCCccccceecccccccccCCcCccCccccceeeccCcc
Q 002897 286 IPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNK 329 (869)
Q Consensus 286 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 329 (869)
.+..|.++++|+.+++. .+. .+| .+..+++|+.++++++.
T Consensus 218 p~~~~~~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 218 PSYGLENLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CSSSCTTCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred ChhhhccchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCCc
Confidence 66666666666665553 333 455 37778888888876543
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=7.1e-23 Score=217.42 Aligned_cols=212 Identities=23% Similarity=0.346 Sum_probs=126.5
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.++..+.+..+.+++.+ .+..+++|++|++++|.++ .+| .++.+++|++|+|++|++.+.. . +.++++|++|+|
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L 92 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLA-P-LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEc
Confidence 34455566666666433 2556778888888888777 344 5777788888888888877543 3 777778888888
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|++. .++ .+..+++|++|++++|.+++.. .+..+++|++|++++|.++++.+ +..+++|+.|++++|.++.
T Consensus 93 ~~n~l~-~~~--~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 93 SGNPLK-NVS--AIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CSCCCS-CCG--GGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred cCCcCC-Cch--hhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 888776 443 3555566666666666655432 25666666666666666655433 5556666666666666554
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceec
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGT 261 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 261 (869)
++ .+..+++|++|++++|++++..+ +..+++|++|++++|++.+.
T Consensus 166 ~~--------~l~~l~~L~~L~l~~n~l~~~~~---------------------------l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 166 LT--------PLANLSKLTTLKADDNKISDISP---------------------------LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CG--------GGTTCTTCCEEECCSSCCCCCGG---------------------------GGGCTTCCEEECTTSCCCBC
T ss_pred Ch--------hhcCCCCCCEEECCCCccCcChh---------------------------hcCCCCCCEEEccCCccCcc
Confidence 33 14555555555555555553221 34444555555555555433
Q ss_pred CCccccCCCCCCEEEccCcccc
Q 002897 262 VPPEIGWLKNLQSLYLNSNFLH 283 (869)
Q Consensus 262 ~~~~~~~l~~L~~L~L~~N~l~ 283 (869)
. .+..+++|+.|+|++|+++
T Consensus 211 ~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 211 S--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp G--GGTTCTTCCEEEEEEEEEE
T ss_pred c--cccCCCCCCEEEccCCeee
Confidence 2 2455555666666666555
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.4e-25 Score=247.21 Aligned_cols=79 Identities=13% Similarity=0.206 Sum_probs=52.3
Q ss_pred eccCCcCccccCcccccCcCCCEEEccCCccCccC----CccccCCCCCCEEeCcCccc---CccCCccc-------ccC
Q 002897 28 SLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKI----PDTLGQLRKLIYLNIGRNQF---SGFIPPSI-------YNI 93 (869)
Q Consensus 28 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~----p~~~~~l~~L~~L~L~~n~i---~~~~p~~~-------~~l 93 (869)
.++...+. .++..+..+++|++|+|++|+|+... +..|..+++|++|+|++|.+ .+.+|..+ .++
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~ 93 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhC
Confidence 33444444 56677788888888888888887543 33466788888888888543 33444444 566
Q ss_pred CCCcEEECcCCcCc
Q 002897 94 SSFEFIFLQSNRFH 107 (869)
Q Consensus 94 ~~L~~L~Ls~N~l~ 107 (869)
++|++|+|++|.+.
T Consensus 94 ~~L~~L~Ls~n~l~ 107 (386)
T 2ca6_A 94 PKLHTVRLSDNAFG 107 (386)
T ss_dssp TTCCEEECCSCCCC
T ss_pred CcccEEECCCCcCC
Confidence 67777777777665
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.5e-22 Score=213.20 Aligned_cols=205 Identities=22% Similarity=0.326 Sum_probs=168.9
Q ss_pred cCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccC
Q 002897 4 AQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFS 83 (869)
Q Consensus 4 l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~ 83 (869)
+..+++++.++. ..+++|+.|++++|.++. +| .+..+++|++|+|++|+++.. +. +..+++|++|+|++|+++
T Consensus 26 l~~~~~~~~~~~---~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 26 AGKSNVTDTVTQ---ADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp TTCSSTTSEECH---HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCS
T ss_pred hCCCCcCceecH---HHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCC
Confidence 455666633442 357899999999999994 55 699999999999999999954 44 999999999999999998
Q ss_pred ccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCc
Q 002897 84 GFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINF 163 (869)
Q Consensus 84 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~ 163 (869)
+. ..+.++++|++|+|++|++. .++. +..+++|++|++++|.+++..+ +..+++|++|++++|.++++.+ +
T Consensus 99 ~~--~~~~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 99 NV--SAIAGLQSIKTLDLTSTQIT-DVTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp CC--GGGTTCTTCCEEECTTSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred Cc--hhhcCCCCCCEEECCCCCCC-Cchh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 54 47999999999999999998 5663 8999999999999999997654 8999999999999999987665 9
Q ss_pred cCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccc
Q 002897 164 NSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS 235 (869)
Q Consensus 164 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~ 235 (869)
..+++|+.|++++|.++.++. +..+++|++|++++|++++..+ +..+++ |+.|++++|.++
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--------l~~l~~L~~L~L~~N~l~~~~~--l~~l~~-L~~L~l~~N~i~ 230 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--------LASLPNLIEVHLKNNQISDVSP--LANTSN-LFIVTLTNQTIT 230 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--------GGGCTTCCEEECTTSCCCBCGG--GTTCTT-CCEEEEEEEEEE
T ss_pred cCCCCCCEEECCCCccCcChh--------hcCCCCCCEEEccCCccCcccc--ccCCCC-CCEEEccCCeee
Confidence 999999999999999987652 7788999999999999885432 444443 555555555554
No 346
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=6.1e-25 Score=242.11 Aligned_cols=260 Identities=19% Similarity=0.235 Sum_probs=150.0
Q ss_pred CCcccccCChhhhhccCCcCEEeccCCcCcccc----CcccccCcCCCEEEccCCc---cCccCCccc-------cCCCC
Q 002897 6 NNKLVGDIPVEIGCYLFKLENLSLAENHLTGQL----PVSIGNLSALQVIDIRGNR---LGGKIPDTL-------GQLRK 71 (869)
Q Consensus 6 ~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~n~---i~~~~p~~~-------~~l~~ 71 (869)
...+. .++..+. .+++|+.|+|++|.|+... +..|..+++|++|+|++|. +++.+|..+ ..+++
T Consensus 18 ~~~~~-~l~~~l~-~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~ 95 (386)
T 2ca6_A 18 TEDEK-SVFAVLL-EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPK 95 (386)
T ss_dssp SHHHH-TTSHHHH-HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTT
T ss_pred HHHHH-HHHHHHh-cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCc
Confidence 33455 6777765 6889999999999998653 3457789999999999964 444555554 78999
Q ss_pred CCEEeCcCcccCc----cCCcccccCCCCcEEECcCCcCcccCCchhhcC-CcchhhhhccccccceeccccccCCCCCc
Q 002897 72 LIYLNIGRNQFSG----FIPPSIYNISSFEFIFLQSNRFHGSLPFDMVAN-LPNLRKFVAAKNNLTGFLPISLSNASNLE 146 (869)
Q Consensus 72 L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-l~~L~~L~l~~n~i~~~~~~~l~~l~~L~ 146 (869)
|++|+|++|.+.. .+|..+.++++|++|+|++|.+.+..+ ..+.. +..+. .|.+.+ ..++|+
T Consensus 96 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~-~~l~~~l~~l~-----~~~~~~-------~~~~L~ 162 (386)
T 2ca6_A 96 LHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAG-AKIARALQELA-----VNKKAK-------NAPPLR 162 (386)
T ss_dssp CCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHH-HHHHHHHHHHH-----HHHHHH-------TCCCCC
T ss_pred ccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHH-HHHHHHHHHHh-----hhhhcc-------cCCCCc
Confidence 9999999999986 467788999999999999999862222 22221 11111 111111 115677
Q ss_pred EEEccCCcccc-ccC---cCccCCCCCCEEEccCccCCCCCCCCcchhh-hccCCCCCcEEEccCCCCC----CCCChhh
Q 002897 147 LLELRDNQFIG-KMS---INFNSLKNLSVLILGNNHLGNRAANDLDFVT-VLANCSKLENLGLYDNQFG----GLLPHSL 217 (869)
Q Consensus 147 ~L~L~~N~i~~-~~~---~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-~l~~l~~L~~L~L~~n~l~----~~~~~~~ 217 (869)
+|+|++|+++. ..+ ..|..+++|++|+|++|.++..... .+.. .+..+++|++|+|++|.++ ..+|..+
T Consensus 163 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~--~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 163 SIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIE--HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp EEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHH--HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred EEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHH--HHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 77777776652 222 2344556666666666665421110 0112 4555666666666666654 2333444
Q ss_pred hhccccceEEEecCCccccc----CCccc--cCCCCCCeeecccCccee----cCCccc-cCCCCCCEEEccCcccc
Q 002897 218 ANLSNTMTTIDIGGNYFSGT----IPPGL--GNLVHLNSIAMEGNQLIG----TVPPEI-GWLKNLQSLYLNSNFLH 283 (869)
Q Consensus 218 ~~l~~~L~~L~l~~n~l~~~----~~~~~--~~l~~L~~L~l~~n~l~~----~~~~~~-~~l~~L~~L~L~~N~l~ 283 (869)
..+++ |+.|+|++|.+++. ++..+ +.+++|++|+|++|.+.. .+|..+ .++++|++|+|++|+++
T Consensus 241 ~~~~~-L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 241 KSWPN-LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp GGCTT-CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ccCCC-cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 44433 45555555544432 22333 124445555555555443 233333 33445555555555444
No 347
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=5.3e-23 Score=214.47 Aligned_cols=153 Identities=18% Similarity=0.165 Sum_probs=121.2
Q ss_pred HHHHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc------------------hhhHHHHHHHHHHHhC
Q 002897 547 AKLSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK------------------GALKSFLTECEALRSI 608 (869)
Q Consensus 547 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l 608 (869)
..+......|.+.+.||+|+||.||+|.+ .+|+.||+|+++.... .....+.+|+++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34445556677789999999999999999 7899999999964321 1345689999999999
Q ss_pred CCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 002897 609 RHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVH 688 (869)
Q Consensus 609 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 688 (869)
+| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. ||+|
T Consensus 162 ~~---~~v~~~~~~------~~~~lvmE~~~g~~L~~-l~~------------~~~~~i~~qi~~~l~~lH~~---giiH 216 (282)
T 1zar_A 162 QG---LAVPKVYAW------EGNAVLMELIDAKELYR-VRV------------ENPDEVLDMILEEVAKFYHR---GIVH 216 (282)
T ss_dssp TT---SSSCCEEEE------ETTEEEEECCCCEEGGG-CCC------------SCHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cC---CCcCeEEec------cceEEEEEecCCCcHHH-cch------------hhHHHHHHHHHHHHHHHHHC---CCEe
Confidence 84 444444322 45699999999999988 422 12347999999999999999 9999
Q ss_pred cCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCC
Q 002897 689 GDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTG 747 (869)
Q Consensus 689 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 747 (869)
|||||+|||++ ++.+||+|||+|+. +..|+|||++..
T Consensus 217 rDlkp~NILl~-~~~vkl~DFG~a~~---------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 217 GDLSQYNVLVS-EEGIWIIDFPQSVE---------------------VGEEGWREILER 253 (282)
T ss_dssp SCCSTTSEEEE-TTEEEECCCTTCEE---------------------TTSTTHHHHHHH
T ss_pred CCCCHHHEEEE-CCcEEEEECCCCeE---------------------CCCCCHHHHHHH
Confidence 99999999999 99999999999963 445788997643
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.2e-23 Score=225.17 Aligned_cols=255 Identities=18% Similarity=0.230 Sum_probs=179.6
Q ss_pred CCCEEEccCCccCccCCccccCC--CCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCccc-CCchhhcCCcchhh
Q 002897 47 ALQVIDIRGNRLGGKIPDTLGQL--RKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGS-LPFDMVANLPNLRK 123 (869)
Q Consensus 47 ~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~l~~L~~ 123 (869)
.++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. +.++++|++|+|++|.+.+. +| ..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~-~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLH-GILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHH-HHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHH-HHHhhCCCCCE
Confidence 3667777777665 4556665 6777777777777755444 44677777777777776533 33 45667777777
Q ss_pred hhccccccceeccccccCCCCCcEEEccCC-ccccc-cCcCccCCCCCCEEEccCc-cCCCCCCCCcchhhhccCCC-CC
Q 002897 124 FVAAKNNLTGFLPISLSNASNLELLELRDN-QFIGK-MSINFNSLKNLSVLILGNN-HLGNRAANDLDFVTVLANCS-KL 199 (869)
Q Consensus 124 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N-~i~~~-~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~l~~l~-~L 199 (869)
|++++|.+++..+..+..+++|++|+|++| .+++. .+..+..+++|++|++++| .++.. ..+..+..++ +|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~-----~~~~~~~~l~~~L 197 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK-----HVQVAVAHVSETI 197 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH-----HHHHHHHHSCTTC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH-----HHHHHHHhcccCC
Confidence 777777777666777777888888888888 56542 4445777888888888888 77642 1234567788 88
Q ss_pred cEEEccCC--CCC-CCCChhhhhccccceEEEecCCc-ccccCCccccCCCCCCeeecccCc-ceecCCccccCCCCCCE
Q 002897 200 ENLGLYDN--QFG-GLLPHSLANLSNTMTTIDIGGNY-FSGTIPPGLGNLVHLNSIAMEGNQ-LIGTVPPEIGWLKNLQS 274 (869)
Q Consensus 200 ~~L~L~~n--~l~-~~~~~~~~~l~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~ 274 (869)
++|++++| .++ +.++..+..+++ |+.|++++|. +++..+..+..+++|++|++++|. +.......++.+++|+.
T Consensus 198 ~~L~l~~~~~~~~~~~l~~~~~~~~~-L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~ 276 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLSTLVRRCPN-LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKT 276 (336)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTT-CSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred CEEEeCCCcccCCHHHHHHHHhhCCC-CCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCE
Confidence 88888888 454 345566666665 8888888888 676777788888999999999985 32222235788999999
Q ss_pred EEccCccccCcCCCCCCCCc-cccceecccccccccCCcCccC
Q 002897 275 LYLNSNFLHGYIPSSLGNLT-MLTLLALEINNLQGKIPSSLGN 316 (869)
Q Consensus 275 L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~ 316 (869)
|++++| ++ ...+..+. .++.|++++|++++..|..++.
T Consensus 277 L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 277 LQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp EECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred EeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 999988 33 33455553 4888889999999888887765
No 349
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.5e-23 Score=224.84 Aligned_cols=256 Identities=17% Similarity=0.171 Sum_probs=183.6
Q ss_pred CCCEEeCcCcccCccCCcccccC--CCCcEEECcCCcCcccCCchhhcCCcchhhhhcccccccee-ccccccCCCCCcE
Q 002897 71 KLIYLNIGRNQFSGFIPPSIYNI--SSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGF-LPISLSNASNLEL 147 (869)
Q Consensus 71 ~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~ 147 (869)
.++.|++++|.+. |..+..+ ++++.|++++|.+.+..+ . +..+++|++|++++|.+++. ++..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~-~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA-E-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC-S-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccch-h-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 4778888888776 5667777 788888888888874444 3 45678888888888888755 6777888888888
Q ss_pred EEccCCccccccCcCccCCCCCCEEEccCc-cCCCCCCCCcchhhhccCCCCCcEEEccCC-CCCCC-CChhhhhccccc
Q 002897 148 LELRDNQFIGKMSINFNSLKNLSVLILGNN-HLGNRAANDLDFVTVLANCSKLENLGLYDN-QFGGL-LPHSLANLSNTM 224 (869)
Q Consensus 148 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~~L 224 (869)
|+|++|.+++..+..|..+++|++|++++| .++.. .++..+..+++|++|++++| .+++. ++..+..++.+|
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~-----~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L 197 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEF-----ALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 197 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHH-----HHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHH-----HHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC
Confidence 888888877777777788888888888888 55431 12345677888888888888 77754 455666776238
Q ss_pred eEEEecCC--ccc-ccCCccccCCCCCCeeecccCc-ceecCCccccCCCCCCEEEccCcc-ccCcCCCCCCCCccccce
Q 002897 225 TTIDIGGN--YFS-GTIPPGLGNLVHLNSIAMEGNQ-LIGTVPPEIGWLKNLQSLYLNSNF-LHGYIPSSLGNLTMLTLL 299 (869)
Q Consensus 225 ~~L~l~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 299 (869)
++|++++| .++ +.++..+.++++|++|++++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|
T Consensus 198 ~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 277 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 277 (336)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEE
Confidence 88888888 444 3456667778888888888888 666667777888888888888884 332222356778888888
Q ss_pred ecccccccccCCcCccCcc-ccceeeccCcccCCCCCccccc
Q 002897 300 ALEINNLQGKIPSSLGNCT-SLIMLTLSKNKLDGVLPPQILS 340 (869)
Q Consensus 300 ~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~ 340 (869)
++++| ++ ...+..+. +|+.|++++|++++..|+.+..
T Consensus 278 ~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 278 QVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp ECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred eccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 88887 33 33455553 4777778888888777765543
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.5e-21 Score=194.80 Aligned_cols=180 Identities=20% Similarity=0.320 Sum_probs=100.9
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCC
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSN 104 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N 104 (869)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34555555555 333332 235555555555555444445555555555555555555444444555555555555555
Q ss_pred cCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCC
Q 002897 105 RFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAA 184 (869)
Q Consensus 105 ~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 184 (869)
++. .+|...|.++++|++|++++|++++..+..|..+++|++|+|++|+++++.+..|..+++|++|++++|.+.
T Consensus 87 ~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~---- 161 (208)
T 2o6s_A 87 QLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD---- 161 (208)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC----
T ss_pred cCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee----
Confidence 554 444444444444444444444444444455666667777777777766666656666666666666666542
Q ss_pred CCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhcc
Q 002897 185 NDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLS 221 (869)
Q Consensus 185 ~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 221 (869)
..+++|++|+++.|++++.+|..++.+.
T Consensus 162 ---------~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 ---------CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---------CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---------cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 2345666666666666666666555543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=9.8e-21 Score=188.82 Aligned_cols=179 Identities=20% Similarity=0.265 Sum_probs=124.3
Q ss_pred CCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhcc
Q 002897 48 LQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAA 127 (869)
Q Consensus 48 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~ 127 (869)
-+.++++++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|++. .+|...|..+++|++|+++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC-ccChhhcCCCCCcCEEECC
Confidence 467889999988 556554 468999999999999777778889999999999999997 6776667777777777777
Q ss_pred ccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCC
Q 002897 128 KNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDN 207 (869)
Q Consensus 128 ~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n 207 (869)
+|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|++++|.++.++.. .+..+++|++|++++|
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~------~~~~l~~L~~L~l~~N 158 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG------VFDRLTSLQYIWLHDN 158 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT------TTTTCTTCCEEECCSC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH------HhccCCCccEEEecCC
Confidence 7777766666677777777777777777766666667777777777777776665543 3556666666666666
Q ss_pred CCCCCCChhhhhccccceEEEecCCcccccCCccccC
Q 002897 208 QFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGN 244 (869)
Q Consensus 208 ~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~ 244 (869)
.+.+..| .|+.|+++.|.+++.+|..++.
T Consensus 159 ~~~~~~~--------~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 159 PWDCTCP--------GIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp CBCCCTT--------TTHHHHHHHHHCTTTBBCTTSS
T ss_pred CeecCCC--------CHHHHHHHHHhCCceeeccCcc
Confidence 5553222 1444444444444444444443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=9.2e-21 Score=215.49 Aligned_cols=168 Identities=25% Similarity=0.356 Sum_probs=94.4
Q ss_pred CCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeecc
Q 002897 247 HLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLS 326 (869)
Q Consensus 247 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 326 (869)
+|++|+|++|++. .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|++++|+|++ +|. .+++|+.|+++
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 3444444444444 233 223444555555555443 333 333 45555555555543 333 34455555555
Q ss_pred CcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCC-------cEEEee
Q 002897 327 KNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSL-------EYVKMQ 399 (869)
Q Consensus 327 ~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------~~L~l~ 399 (869)
+|+|++ +|. ..+.++.|+|++|+|++ +|. |. ++|+.|+|++|.|+ .+|. |.. +| +.|+|+
T Consensus 149 ~N~l~~-lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls 215 (571)
T 3cvr_A 149 NNQLTM-LPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCR 215 (571)
T ss_dssp SSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECC
T ss_pred CCccCc-CCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecC
Confidence 555542 332 22334445555555543 444 44 67777777777777 5555 544 56 888888
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccc
Q 002897 400 DNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSF 440 (869)
Q Consensus 400 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 440 (869)
+|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+..
T Consensus 216 ~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 216 ENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 88887 67777777888888888888888888877776554
No 353
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=3.2e-21 Score=209.76 Aligned_cols=178 Identities=21% Similarity=0.222 Sum_probs=143.2
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCcccc-CCCCCCEEeCcCcccCccCCcccccCCCCcEEECc
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLG-QLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQ 102 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls 102 (869)
-+.+++++|+|+ .+|..+. ..+++|+|++|+|++..+..|. ++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 367888888888 5666553 4578888888888877777777 88888888888888887777788888888888888
Q ss_pred CCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCc---cCCCCCCEEEccCccC
Q 002897 103 SNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINF---NSLKNLSVLILGNNHL 179 (869)
Q Consensus 103 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~---~~l~~L~~L~l~~n~l 179 (869)
+|++. .++...|.++++|+.|+|++|+|+...+..|.++++|++|+|++|+|+.+.+..| ..+++|+.|+|++|+|
T Consensus 97 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCC-cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 88887 6777778888888888888888888888899999999999999999988777777 5689999999999999
Q ss_pred CCCCCCCcchhhhccCCCC--CcEEEccCCCCCC
Q 002897 180 GNRAANDLDFVTVLANCSK--LENLGLYDNQFGG 211 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~--L~~L~L~~n~l~~ 211 (869)
+.++.. .+..++. |+.|+|++|.+..
T Consensus 176 ~~l~~~------~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 176 KKLPLT------DLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCHH------HHHHSCHHHHTTEECCSSCEEC
T ss_pred CccCHH------HhhhccHhhcceEEecCCCccC
Confidence 987743 4666666 4889999999873
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1.7e-20 Score=188.38 Aligned_cols=152 Identities=20% Similarity=0.332 Sum_probs=111.9
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCC
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSN 104 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N 104 (869)
+.+++++++++ .+|..+. ++|++|+|++|+|+.+.+..|..+++|++|+|++|+|+++.|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56666777766 4555443 56777777777777666666777777777777777777666677777777777777777
Q ss_pred cCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 105 RFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 105 ~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
+++ .+|...|.++++|+.|+|++|.|++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|++|.+.
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 776 666666777777777777777777777778888888888888888888888878888888888888888775
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=3.6e-20 Score=185.95 Aligned_cols=150 Identities=22% Similarity=0.351 Sum_probs=102.4
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++++++ +||..++ ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+++.|++|.++++|++|+|++|+
T Consensus 16 v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 16 VDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 456667777 6776654 566777777777776555667777777777777777776666777777777777777777
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFI 156 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~ 156 (869)
|+.+.+..|.++++|++|+|++|++. .++...|.++++|+.|+|++|.|++..+..|..+++|++|+|++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCC-EeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 77555555666777777777777776 555556667777777777777777666666777777777777777654
No 356
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=2.3e-20 Score=212.25 Aligned_cols=197 Identities=24% Similarity=0.287 Sum_probs=162.8
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.+|+.|+|++|+|++ +|..+ +++|++|+|++|+|+ .+| +.+++|++|+|++|+|++ +|. +.+ +|++|+|
T Consensus 59 ~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 59 NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 499999999999996 77766 389999999999999 677 567999999999999996 666 666 9999999
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|+++ .+|. .+++|+.|++++|.|++ +|. .+++|++|+|++|+|+++.. |. ++|+.|+|++|+|+.
T Consensus 128 s~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~~ 194 (571)
T 3cvr_A 128 DNNQLT-MLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLES 194 (571)
T ss_dssp CSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCSS
T ss_pred CCCcCC-CCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCCc
Confidence 999998 5885 68999999999999997 454 57899999999999998544 65 999999999999998
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCC
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVH 247 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~ 247 (869)
++. +.- ..+...+.|+.|+|++|+|+ .+|..+..+++ |+.|+|++|.+++.+|..+..++.
T Consensus 195 lp~--~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 195 LPA--VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDP-TCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CCC--CC---------CCEEEECCSSCCC-CCCGGGGGSCT-TEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hhh--HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCC-CCEEEeeCCcCCCcCHHHHHHhhc
Confidence 774 110 11122233499999999999 57888888776 999999999999988888877554
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=187.15 Aligned_cols=153 Identities=22% Similarity=0.275 Sum_probs=103.9
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCccCC-ccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIP-DTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p-~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|+.+++|++|+|++|+|+++.+.+|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46666666666 3454442 345666666666665433 3466666666666666666666556666666666666666
Q ss_pred CcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
|++. .++...|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|.+.-
T Consensus 91 N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCC-CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccC-ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6665 5555666666666666676676666667777888888888888888888778888888888888888887753
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.2e-20 Score=195.08 Aligned_cols=189 Identities=21% Similarity=0.340 Sum_probs=107.9
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
+..+.+..+.+++..+ +..+++|++|++++|.++. ++ .++.+++|++|+|++|++++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3444455555543222 3455556666666666552 22 25555666666666666654322 55566666666666
Q ss_pred CcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCC
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRA 183 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 183 (869)
|++. .+| .+..+++|++|++++|++++. ..+..+++|++|++++|+++++ ..+..+++|++|++++|.++.++
T Consensus 100 n~l~-~~~--~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 100 NKVK-DLS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp SCCC-CGG--GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CcCC-CCh--hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch
Confidence 6655 333 255566666666666666543 3456666666666666666654 45666666666666666666543
Q ss_pred CCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccc
Q 002897 184 ANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSG 236 (869)
Q Consensus 184 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~ 236 (869)
.+..+++|++|++++|++++. + .+..+++ |+.|++++|.++.
T Consensus 173 --------~l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~-L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 173 --------PLAGLTKLQNLYLSKNHISDL-R-ALAGLKN-LDVLELFSQECLN 214 (291)
T ss_dssp --------GGTTCTTCCEEECCSSCCCBC-G-GGTTCTT-CSEEEEEEEEEEC
T ss_pred --------hhcCCCccCEEECCCCcCCCC-h-hhccCCC-CCEEECcCCcccC
Confidence 155666666666666666642 2 3555554 6777777776653
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=5.3e-20 Score=211.82 Aligned_cols=192 Identities=21% Similarity=0.341 Sum_probs=120.8
Q ss_pred CCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEEC
Q 002897 22 FKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFL 101 (869)
Q Consensus 22 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 101 (869)
.++..+.|+.+.++...+ +..+++|+.|+|++|.|. .+| .|+.+++|+.|+|++|+|.+..| +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345555666666654333 456666666666666666 333 46666666666666666664433 666666666666
Q ss_pred cCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCC
Q 002897 102 QSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGN 181 (869)
Q Consensus 102 s~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 181 (869)
++|.+. .+| .+..+++|+.|+|++|.++.. ..+..+++|+.|+|++|.|.++ ..|..+++|+.|+|++|.++.
T Consensus 95 s~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 95 DENKIK-DLS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CSSCCC-CCT--TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred cCCCCC-CCh--hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 666665 444 356666666666666666643 3466677777777777777655 456677777777777777765
Q ss_pred CCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCccccc
Q 002897 182 RAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGT 237 (869)
Q Consensus 182 ~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~ 237 (869)
++. +..+++|+.|+|++|+|++. ..+..+++ |+.|+|++|.+.+.
T Consensus 168 ~~~--------l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~-L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--------LAGLTKLQNLYLSKNHISDL--RALAGLKN-LDVLELFSQECLNK 212 (605)
T ss_dssp CGG--------GTTCTTCCEEECCSSCCCBC--GGGTTCTT-CSEEECCSEEEECC
T ss_pred chh--------hccCCCCCEEECcCCCCCCC--hHHccCCC-CCEEEccCCcCcCC
Confidence 431 56677777777777777643 34556654 77777777776643
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=2.3e-20 Score=196.16 Aligned_cols=170 Identities=23% Similarity=0.379 Sum_probs=96.3
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ ++++++|++|+|++|++++. ..+.++++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 345566666666666532 2 35556666666666666653322 55666666666666666532 235566666666
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHL 179 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 179 (869)
+|++|++. .++ .+..+++|+.|++++|.+++. ..+..+++|++|++++|+++++.+ +..+++|+.|++++|.+
T Consensus 118 ~L~~n~i~-~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 118 SLEHNGIS-DIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp ECTTSCCC-CCG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred ECCCCcCC-CCh--hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666665 332 355566666666666666543 455566666666666666655443 55566666666666666
Q ss_pred CCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 180 GNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
+.++ .+..+++|+.|++++|+++
T Consensus 191 ~~l~--------~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 191 SDLR--------ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CBCG--------GGTTCTTCSEEEEEEEEEE
T ss_pred CCCh--------hhccCCCCCEEECcCCccc
Confidence 5442 2555666666666666555
No 361
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5.6e-20 Score=211.63 Aligned_cols=185 Identities=21% Similarity=0.367 Sum_probs=120.7
Q ss_pred ccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCccc
Q 002897 3 DAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQF 82 (869)
Q Consensus 3 ~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i 82 (869)
.++++.+...++ ...+.+|+.|+|++|.|+. ++ .|..+++|++|+|++|+|++..| |+.+++|+.|+|++|+|
T Consensus 27 ~l~~~~i~~~~~---~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l 99 (605)
T 1m9s_A 27 NLKKKSVTDAVT---QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKI 99 (605)
T ss_dssp HTTCSCTTSEEC---HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred hccCCCcccccc---hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCC
Confidence 345555553233 1346677777777777763 33 46777777777777777764433 66777777777777777
Q ss_pred CccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcC
Q 002897 83 SGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSIN 162 (869)
Q Consensus 83 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~ 162 (869)
.+ +| .+..+++|++|+|++|++. .++ .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.|.++.+
T Consensus 100 ~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 100 KD-LS-SLKDLKKLKSLSLEHNGIS-DIN--GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CC-CT-TSTTCTTCCEEECTTSCCC-CCG--GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CC-Ch-hhccCCCCCEEEecCCCCC-CCc--cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 64 22 5667777777777777776 443 366677777777777777654 566677777777777777766555
Q ss_pred ccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 163 FNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 163 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
|..+++|+.|+|++|.|+.++ .+..+++|+.|+|++|++.+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l~--------~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDLR--------ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBCG--------GGTTCTTCSEEECCSEEEEC
T ss_pred hccCCCCCEEECcCCCCCCCh--------HHccCCCCCEEEccCCcCcC
Confidence 667777777777777776542 36667777777777777664
No 362
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=3.9e-20 Score=201.11 Aligned_cols=181 Identities=19% Similarity=0.245 Sum_probs=152.8
Q ss_pred CCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccc-cCCCCcEEECcCCcCcccCCchhhcCCcchhhhhc
Q 002897 48 LQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIY-NISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVA 126 (869)
Q Consensus 48 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l 126 (869)
-+.+++++|+++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|++. .++...|.++++|++|+|
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEEC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCC-ccChhhccCCCCCCEEEC
Confidence 368999999998 6776655 4689999999999988888887 8999999999999998 777778999999999999
Q ss_pred cccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccC
Q 002897 127 AKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYD 206 (869)
Q Consensus 127 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~ 206 (869)
++|+|+.+.+..|.++++|++|+|++|+|..+.+..|..+++|+.|+|++|+|+.++... ...+..+++|+.|+|++
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~---~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVEL---IKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGG---TC----CTTCCEEECCS
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHH---hcCcccCCcCCEEECCC
Confidence 999999888888999999999999999999998999999999999999999999887641 11126789999999999
Q ss_pred CCCCCCCChhhhhcccc-ceEEEecCCccc
Q 002897 207 NQFGGLLPHSLANLSNT-MTTIDIGGNYFS 235 (869)
Q Consensus 207 n~l~~~~~~~~~~l~~~-L~~L~l~~n~l~ 235 (869)
|+|+...+..+..++.. ++.|+|++|.+.
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 99997666777777642 478999999887
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.5e-19 Score=181.34 Aligned_cols=151 Identities=19% Similarity=0.280 Sum_probs=74.8
Q ss_pred EEEccCCccCccCCccccCCCCCCEEeCcCcccCccCC-cccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccc
Q 002897 50 VIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIP-PSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAK 128 (869)
Q Consensus 50 ~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~ 128 (869)
++++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+++ .++...|.++++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC-EECHHHhCCCCCCCEEECCC
Confidence 4555555554 3343332 234455555555554422 23455555555555555554 34444455555555555555
Q ss_pred cccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCC
Q 002897 129 NNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQ 208 (869)
Q Consensus 129 n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~ 208 (869)
|.+++..+..|.++++|++|+|++|+|+++.+..|..+++|++|+|++|+++.+... .|..+++|++|+|++|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~ 164 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG------AFDTLHSLSTLNLLANP 164 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT------TTTTCTTCCEEECCSCC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH------HhcCCCCCCEEEecCcC
Confidence 555544444455555555555555555555555555555555555555555544332 34445555555555555
Q ss_pred CC
Q 002897 209 FG 210 (869)
Q Consensus 209 l~ 210 (869)
+.
T Consensus 165 l~ 166 (220)
T 2v70_A 165 FN 166 (220)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.8e-19 Score=180.76 Aligned_cols=152 Identities=21% Similarity=0.284 Sum_probs=88.4
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
-+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|..+.+..|.++++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4444332 5666666666666655566666666666666666666655455566666666666666
Q ss_pred CcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
|+++ .+|...|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|..+.+..|..+++|+.|+|++|.+.
T Consensus 98 N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 98 NQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 6665 444444444444444444444444 33445556666666666666666555555555555555555555543
No 365
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=1.5e-19 Score=194.09 Aligned_cols=288 Identities=12% Similarity=0.066 Sum_probs=183.8
Q ss_pred cCCcCEEeccCCcCccccCccccc-CcCCCEEEccCCccC--ccCCccccCCCCCCEEeCcCcccCccCCccccc-----
Q 002897 21 LFKLENLSLAENHLTGQLPVSIGN-LSALQVIDIRGNRLG--GKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYN----- 92 (869)
Q Consensus 21 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~i~--~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~----- 92 (869)
+.+++.|.++++ +....-..+.. +++|++|||++|+|. ...+..+. .++.+.+..|.| .+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---cccccccccccc---CHHHhccccccc
Confidence 456777777754 22122223334 667788888887777 33332222 245555555533 3456666
Q ss_pred ---CCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCc----cccccCcCccC
Q 002897 93 ---ISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQ----FIGKMSINFNS 165 (869)
Q Consensus 93 ---l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~----i~~~~~~~~~~ 165 (869)
+++|+.|+|.+ .++ .++..+|.++++|+.|++.+|.+..+.+.+|.++.++..+.+..+. ...+....|.+
T Consensus 97 ~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred ccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 77777777777 665 6666677777777777777777766666677776666666665532 23344445555
Q ss_pred CCCCC-EEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccC
Q 002897 166 LKNLS-VLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGN 244 (869)
Q Consensus 166 l~~L~-~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~ 244 (869)
+.+|+ .+.+.... .++.. ....-....++..+.+.++-.. .....+......|+.|+|++|.++.+.+.+|.+
T Consensus 175 ~~~L~~~i~~~~~~--~l~~~---~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~ 248 (329)
T 3sb4_A 175 GEPLETTIQVGAMG--KLEDE---IMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQ 248 (329)
T ss_dssp SCCCEEEEEECTTC--CHHHH---HHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTT
T ss_pred ccccceeEEecCCC--cHHHH---HhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhC
Confidence 55555 33333211 11100 0001112445566666554221 112222221234889999988888777778889
Q ss_pred CCCCCeeecccCcceecCCccccCCCCCC-EEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCcccccee
Q 002897 245 LVHLNSIAMEGNQLIGTVPPEIGWLKNLQ-SLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIML 323 (869)
Q Consensus 245 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 323 (869)
+++|+.|++.+| +..+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.|+++.|+++...+.+|.++++|+.+
T Consensus 249 ~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 249 KKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 999999999887 7778888889999998 999988 7777888889999999999998888887777889999999888
Q ss_pred ec
Q 002897 324 TL 325 (869)
Q Consensus 324 ~l 325 (869)
+.
T Consensus 327 y~ 328 (329)
T 3sb4_A 327 YK 328 (329)
T ss_dssp EC
T ss_pred cc
Confidence 64
No 366
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2e-19 Score=185.23 Aligned_cols=139 Identities=19% Similarity=0.177 Sum_probs=109.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeE--EEEEEeecccch------------------------hhHHHHHHHHHHHh
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGML--VAVKVLNLMQKG------------------------ALKSFLTECEALRS 607 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~ 607 (869)
.-|++.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.++++
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3467789999999999999999668999 999997532111 11367899999999
Q ss_pred CCCCcc--ceEEEEeeccccCCCceEEEEeecccC-C----CHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHH-
Q 002897 608 IRHRNL--IKIITICSSIDFNGVDFKAIVYDFMQN-G----SLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLH- 679 (869)
Q Consensus 608 l~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH- 679 (869)
+.|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||+|||
T Consensus 127 l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~ 188 (258)
T 1zth_A 127 AKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQ 188 (258)
T ss_dssp HHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHH
Confidence 988754 444443 346899999943 4 77776532 224467789999999999999
Q ss_pred hcCCCCeEecCCCCCceeecCCCcEEEccccccccC
Q 002897 680 HHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFL 715 (869)
Q Consensus 680 ~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 715 (869)
+. ||+||||||+|||++. .++|+|||+|...
T Consensus 189 ~~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 189 EA---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TS---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HC---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 88 9999999999999988 9999999999754
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.3e-19 Score=187.26 Aligned_cols=171 Identities=22% Similarity=0.285 Sum_probs=126.7
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+.++..+++++|.++++. .+..+++|++|++++|+|+ .+| .++.+++|++|+|++|+|++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3567888889999988443 6888899999999999988 455 68889999999999999986544 8889999999
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHL 179 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 179 (869)
+|++|++. .+|. +.. ++|+.|++++|++++. ..+..+++|++|+|++|+|+++. .+..+++|+.|++++|++
T Consensus 91 ~L~~N~l~-~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLK-NLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCS-CCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccC-CcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcC
Confidence 99999887 5653 222 6777777777777753 35777777777777777776652 566777777777777777
Q ss_pred CCCCCCCcchhhhccCCCCCcEEEccCCCCCCC
Q 002897 180 GNRAANDLDFVTVLANCSKLENLGLYDNQFGGL 212 (869)
Q Consensus 180 ~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 212 (869)
+.+. .+..+++|+.|++++|.++..
T Consensus 163 ~~~~--------~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNTG--------GLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBCT--------TSTTCCCCCEEEEEEEEEECC
T ss_pred cchH--------HhccCCCCCEEeCCCCcccCC
Confidence 6651 366677777777777776643
No 368
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=4.3e-21 Score=219.66 Aligned_cols=104 Identities=21% Similarity=0.229 Sum_probs=53.7
Q ss_pred ccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecC-CccccCCCC
Q 002897 193 LANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTV-PPEIGWLKN 271 (869)
Q Consensus 193 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~ 271 (869)
+..+++|+.|+|++|+|+ .+|..+..+++ |+.|+|++|.|++ +| .++.+++|+.|+|++|++.+.. |..++.+++
T Consensus 459 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~-L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~ 534 (567)
T 1dce_A 459 LEQLLLVTHLDLSHNRLR-ALPPALAALRC-LEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR 534 (567)
T ss_dssp GGGGTTCCEEECCSSCCC-CCCGGGGGCTT-CCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred ccccccCcEeecCccccc-ccchhhhcCCC-CCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC
Confidence 344444444444444444 34444444443 5555555555553 33 5555566666666666665544 556666666
Q ss_pred CCEEEccCccccCcCCCC---CCCCcccccee
Q 002897 272 LQSLYLNSNFLHGYIPSS---LGNLTMLTLLA 300 (869)
Q Consensus 272 L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~ 300 (869)
|+.|+|++|++++.+|.. +..+++|+.|+
T Consensus 535 L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 535 LVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp CCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 666666666665443321 11245555554
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=3.9e-18 Score=172.33 Aligned_cols=155 Identities=20% Similarity=0.281 Sum_probs=129.5
Q ss_pred CCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhc
Q 002897 47 ALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVA 126 (869)
Q Consensus 47 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l 126 (869)
..+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++. .+|...|.++++|+.|+|
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEEC
Confidence 3678999999998 6776655 89999999999999988999999999999999999997 888778888888888888
Q ss_pred cccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccC
Q 002897 127 AKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYD 206 (869)
Q Consensus 127 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~ 206 (869)
++|+|+...+..|..+++|++|+|++|+|+. .|..+..+++|++|+|++|+++.++.. .|..+++|+.|+|++
T Consensus 96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~ 168 (229)
T 3e6j_A 96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHG------AFDRLSSLTHAYLFG 168 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCCCCCTT------TTTTCTTCCEEECTT
T ss_pred CCCcCCccChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCCccCHH------HHhCCCCCCEEEeeC
Confidence 8888887777778888888888888888874 456678888888888888888877653 567788888888888
Q ss_pred CCCCCC
Q 002897 207 NQFGGL 212 (869)
Q Consensus 207 n~l~~~ 212 (869)
|.+...
T Consensus 169 N~~~c~ 174 (229)
T 3e6j_A 169 NPWDCE 174 (229)
T ss_dssp SCBCTT
T ss_pred CCccCC
Confidence 887744
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=1.2e-18 Score=179.89 Aligned_cols=166 Identities=20% Similarity=0.286 Sum_probs=145.3
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+++++++++ .+|. +..+++|++|++++|+|+ .++ .+..+++|++|+|++|+|++..+ |+++++|++|+|++|+
T Consensus 24 l~l~~~~i~-~~~~--~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~ 96 (263)
T 1xeu_A 24 QNLGKQSVT-DLVS--QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR 96 (263)
T ss_dssp HHHTCSCTT-SEEC--HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC
T ss_pred HHhcCCCcc-cccc--hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc
Confidence 568899999 7872 357999999999999999 455 79999999999999999995544 9999999999999999
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSI 161 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~ 161 (869)
+++. |.. .. ++|++|+|++|+++ .++ .+..+++|+.|++++|++++. + .+..+++|++|+|++|++.++ .
T Consensus 97 l~~l-~~~-~~-~~L~~L~L~~N~l~-~~~--~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 97 LKNL-NGI-PS-ACLSRLFLDNNELR-DTD--SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp CSCC-TTC-CC-SSCCEEECCSSCCS-BSG--GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--T
T ss_pred cCCc-Ccc-cc-CcccEEEccCCccC-CCh--hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--H
Confidence 9964 433 33 99999999999998 565 489999999999999999976 3 799999999999999999887 6
Q ss_pred CccCCCCCCEEEccCccCCCCCC
Q 002897 162 NFNSLKNLSVLILGNNHLGNRAA 184 (869)
Q Consensus 162 ~~~~l~~L~~L~l~~n~l~~~~~ 184 (869)
.+..+++|+.|++++|.++..+.
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECCCE
T ss_pred HhccCCCCCEEeCCCCcccCCcc
Confidence 79999999999999999987653
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=2.9e-19 Score=191.72 Aligned_cols=264 Identities=9% Similarity=0.047 Sum_probs=184.2
Q ss_pred cCCcCEEeccCCcCc--cccCcccccCcCCCEEEccCCccCccCCccccC--------CCCCCEEeCcCcccCccCCccc
Q 002897 21 LFKLENLSLAENHLT--GQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQ--------LRKLIYLNIGRNQFSGFIPPSI 90 (869)
Q Consensus 21 l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~--------l~~L~~L~L~~n~i~~~~p~~~ 90 (869)
+++|++|||++|+|+ ...+.. ++.++.+.+..|.|. +.+|.+ +++|+.|+|.+ .++.+.+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcccc---ccccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999998 333333 333666777777444 577888 99999999999 8887888899
Q ss_pred ccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccc----cceeccccccCCCCCc-EEEccCCcc-ccccCcCcc
Q 002897 91 YNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNN----LTGFLPISLSNASNLE-LLELRDNQF-IGKMSINFN 164 (869)
Q Consensus 91 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~----i~~~~~~~l~~l~~L~-~L~L~~N~i-~~~~~~~~~ 164 (869)
.++++|++|++++|.+. .++..+|.+..++..+.+..+. .......+|.++.+|+ .+.+..... .........
T Consensus 121 ~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~ 199 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGL 199 (329)
T ss_dssp TTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTC
T ss_pred hcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhccc
Confidence 99999999999999987 7888889888888777766532 2333455677777777 555554321 111111112
Q ss_pred CCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccC
Q 002897 165 SLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGN 244 (869)
Q Consensus 165 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~ 244 (869)
...+++.+.+.++-. .. ++......+++|+.|+|++|+++.+.+.+|.++.+ |+.|+|.+| ++.+.+.+|.+
T Consensus 200 ~~~~~~~l~~~~~l~-~~-----~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~-L~~l~l~~n-i~~I~~~aF~~ 271 (329)
T 3sb4_A 200 QPRDINFLTIEGKLD-NA-----DFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY-LLKIKLPHN-LKTIGQRVFSN 271 (329)
T ss_dssp CGGGCSEEEEEECCC-HH-----HHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT-CCEEECCTT-CCEECTTTTTT
T ss_pred CccccceEEEeeeec-HH-----HHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC-CCEEECCcc-cceehHHHhhC
Confidence 345566666655421 11 11111223677888888877777666667777765 888888777 66667777888
Q ss_pred CCCCC-eeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceec
Q 002897 245 LVHLN-SIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLAL 301 (869)
Q Consensus 245 l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 301 (869)
+++|+ .+.+.+ .+..+.+.+|.++++|+.|++++|.++.+.+..|.++++|+.++.
T Consensus 272 ~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 272 CGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88888 888877 677677788888888888888888888777778888888887753
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=3.2e-21 Score=220.76 Aligned_cols=192 Identities=22% Similarity=0.208 Sum_probs=142.3
Q ss_pred cCCCCCCeeecccCcceecCCccccCCCCCCEEEccCcc-------------ccCcCCCCCCCCcccccee-cccccccc
Q 002897 243 GNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNF-------------LHGYIPSSLGNLTMLTLLA-LEINNLQG 308 (869)
Q Consensus 243 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-l~~n~l~~ 308 (869)
..+++|+.|+|++|++. .+|..++.+++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45666667777777765 556666666677777665554 3334444555555555555 444432
Q ss_pred cCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCccccccccccccccccCCcccc
Q 002897 309 KIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLS 388 (869)
Q Consensus 309 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 388 (869)
.+|..+.+++|.++. +|. ..++.|+|++|.|++ +|. |+++++|+.|+|++|.|+ .+|..|+
T Consensus 423 ---------~~L~~l~l~~n~i~~-l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLK-MEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH-HHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ---------chhhhhhhhcccccc-cCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 234444555555542 111 125678999999985 676 999999999999999999 7888999
Q ss_pred CCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCC-ccccccccccCeeccccccCcccCCCC
Q 002897 389 ACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQI-PKYLENLSFLEYLNLSYNHFEGEVPKK 458 (869)
Q Consensus 389 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~l~l~~N~l~~~~~~~ 458 (869)
++++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.. |..+..+++|+.|+|++|+|++.+|..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999999999999985 66 8999999999999999999776 899999999999999999999887754
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.8e-18 Score=170.45 Aligned_cols=181 Identities=13% Similarity=0.161 Sum_probs=127.8
Q ss_pred ccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCc
Q 002897 9 LVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPP 88 (869)
Q Consensus 9 ~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~ 88 (869)
++ .+|...+. ......+..+... +-+...+++|++|++++|.|+ .+| .+..+++|++|+|++|.++. +.
T Consensus 14 ~~-~~pd~~~~---~~~~~~~~~~~~~---~i~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~ 82 (197)
T 4ezg_A 14 NV-NIPDSTFK---AYLNGLLGQSSTA---NITEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YN 82 (197)
T ss_dssp BC-CCCCHHHH---HHHHHHHTCCTTC---CCBHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CG
T ss_pred ee-ecCcHHHH---HHHHHHhCCCccc---cCChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--ch
Confidence 44 57766553 2222333333333 223466777888888888887 555 57778888888888886652 34
Q ss_pred ccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCc-cccccCcCccCCC
Q 002897 89 SIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQ-FIGKMSINFNSLK 167 (869)
Q Consensus 89 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~-i~~~~~~~~~~l~ 167 (869)
.+.++++|++|++++|++.+..+ ..+..+++|++|++++|.+++..+..+..+++|++|++++|. ++.+ + .+..++
T Consensus 83 ~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~ 159 (197)
T 4ezg_A 83 PISGLSNLERLRIMGKDVTSDKI-PNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-M-PLKTLP 159 (197)
T ss_dssp GGTTCTTCCEEEEECTTCBGGGS-CCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-G-GGGGCS
T ss_pred hhhcCCCCCEEEeECCccCcccC-hhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-H-hhcCCC
Confidence 67778888888888888774344 347778888888888888887777888888899999999997 6554 3 688889
Q ss_pred CCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 168 NLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 168 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
+|++|++++|.++.++ .+..+++|++|++++|++.+
T Consensus 160 ~L~~L~l~~n~i~~~~--------~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 160 ELKSLNIQFDGVHDYR--------GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp SCCEEECTTBCCCCCT--------TGGGCSSCCEEEECBC----
T ss_pred CCCEEECCCCCCcChH--------HhccCCCCCEEEeeCcccCC
Confidence 9999999999888754 37788899999999998863
No 374
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=2.5e-17 Score=180.16 Aligned_cols=268 Identities=11% Similarity=0.123 Sum_probs=215.1
Q ss_pred hccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcE
Q 002897 19 CYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEF 98 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 98 (869)
.....++.+.+.+ .++.+-..+|.++ +|+.+.|.+| ++.+...+|.+. +|+.+.|.. .++.+.+.+|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3457778888765 4565777788875 7888888777 666777888884 688888885 677677788888888999
Q ss_pred EECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc
Q 002897 99 IFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 178 (869)
++|++|++. .++..+|. ..+|+.+.+.+ +++.+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.+ .+.
T Consensus 185 l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~ 258 (401)
T 4fdw_A 185 ADLSKTKIT-KLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNG 258 (401)
T ss_dssp EECTTSCCS-EECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETT
T ss_pred eecCCCcce-EechhhEe-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCC
Confidence 998888887 78888887 47888888874 477778888889999999999875 67788888888 78999988 456
Q ss_pred CCCCCCCCcchhhhccCCCCCcEEEccCCCCC-----CCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeec
Q 002897 179 LGNRAANDLDFVTVLANCSKLENLGLYDNQFG-----GLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAM 253 (869)
Q Consensus 179 l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 253 (869)
++.++.. +|.+|++|+.+++.+|.+. .+.+..|.++.+ |+.++|. +.++.+...+|.++++|+.+.|
T Consensus 259 i~~I~~~------aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~-L~~l~l~-~~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 259 VTNIASR------AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPK-LARFEIP-ESIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp CCEECTT------TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTT-CCEECCC-TTCCEECTTTTTTCCSCCEEEE
T ss_pred ccEEChh------HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCcc-CCeEEeC-CceEEEhhhhhcCCCCccEEEE
Confidence 7777655 6888999999998887765 456677888776 9999998 4577677888999999999999
Q ss_pred ccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCc-cccceeccccccc
Q 002897 254 EGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLT-MLTLLALEINNLQ 307 (869)
Q Consensus 254 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~n~l~ 307 (869)
..| +..+...+|.++ +|+.+++.+|.+....+..|.+++ .++.|.+..+.+.
T Consensus 331 p~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 331 PAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred Ccc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 555 777888899999 999999999998888888888885 6888988888765
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=2.7e-18 Score=169.23 Aligned_cols=152 Identities=16% Similarity=0.219 Sum_probs=78.9
Q ss_pred ccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 20 YLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.+++|+.|++++|.|+ .+| .+..+++|++|++++|.++ . +..++.+++|++|+|++|++++..|..|.++++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3455555555555555 333 4555555555555555444 1 2345555555555555555554455555555555555
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccc-cceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCcc
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNN-LTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNH 178 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~ 178 (869)
+|++|++.+..| ..+..+++|++|++++|. ++.. + .+..+++|++|++++|+++++. .+..+++|++|++++|+
T Consensus 118 ~Ls~n~i~~~~~-~~l~~l~~L~~L~L~~n~~i~~~-~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 118 DISHSAHDDSIL-TKINTLPKVNSIDLSYNGAITDI-M-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp ECCSSBCBGGGH-HHHTTCSSCCEEECCSCTBCCCC-G-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EecCCccCcHhH-HHHhhCCCCCEEEccCCCCcccc-H-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 555555552222 345555555555555555 4432 2 4555555555555555555432 45555555555555555
Q ss_pred CC
Q 002897 179 LG 180 (869)
Q Consensus 179 l~ 180 (869)
++
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=5.3e-17 Score=177.58 Aligned_cols=269 Identities=12% Similarity=0.119 Sum_probs=231.2
Q ss_pred cccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcch
Q 002897 42 IGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNL 121 (869)
Q Consensus 42 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 121 (869)
+..+..++.+.+.++ ++.+...+|.+. +|+.++|..| ++.+...+|.+. +|+.+.+.. .+. .++..+|.++++|
T Consensus 109 ~~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L 182 (401)
T 4fdw_A 109 TEILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNL 182 (401)
T ss_dssp EEECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTC
T ss_pred EEecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccC
Confidence 445688999998764 665778899985 7999999887 777888899985 799999996 666 7888999999999
Q ss_pred hhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcE
Q 002897 122 RKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLEN 201 (869)
Q Consensus 122 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~ 201 (869)
+.+++.+|+++.+...+|. ..+|+.+.|.++ ++.+...+|.++++|+.+.+..| ++.++.. +|.+ .+|+.
T Consensus 183 ~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~------aF~~-~~L~~ 252 (401)
T 4fdw_A 183 KKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE------AFRE-SGITT 252 (401)
T ss_dssp CEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTT------TTTT-CCCSE
T ss_pred CeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccc------cccc-CCccE
Confidence 9999999999988888887 589999999855 88899999999999999999875 7777765 5677 78999
Q ss_pred EEccCCCCCCCCChhhhhccccceEEEecCCccc-----ccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEE
Q 002897 202 LGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFS-----GTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLY 276 (869)
Q Consensus 202 L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 276 (869)
+.+ .+.++.+...+|.++.+ |+.+++.+|.+. .+.+.+|.++++|+.+.+. +.+..+...+|.++++|+.+.
T Consensus 253 i~l-p~~i~~I~~~aF~~c~~-L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~ 329 (401)
T 4fdw_A 253 VKL-PNGVTNIASRAFYYCPE-LAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLT 329 (401)
T ss_dssp EEE-ETTCCEECTTTTTTCTT-CCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEE
T ss_pred EEe-CCCccEEChhHhhCCCC-CCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEE
Confidence 999 55677677888988886 999999998875 5677889999999999998 558878889999999999999
Q ss_pred ccCccccCcCCCCCCCCccccceecccccccccCCcCccCcc-ccceeeccCcccC
Q 002897 277 LNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCT-SLIMLTLSKNKLD 331 (869)
Q Consensus 277 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~ 331 (869)
|.+| ++.+...+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 330 lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 330 IPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 9665 777888999999 999999999999877788899885 7899999888765
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.3e-18 Score=170.57 Aligned_cols=133 Identities=24% Similarity=0.366 Sum_probs=73.3
Q ss_pred cceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccccccc
Q 002897 297 TLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISG 376 (869)
Q Consensus 297 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 376 (869)
+.+++++|+++ .+|..+.. +|++|++++|++++..+... |+.+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~------------------------~~~l~~L~~L~Ls~ 63 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGL------------------------FGRLPHLVKLELKR 63 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCS------------------------GGGCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccc------------------------cccCCCCCEEECCC
Confidence 45666666665 45544432 56666666666553322222 55555555555555
Q ss_pred ccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccCcccCC
Q 002897 377 NRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHFEGEVP 456 (869)
Q Consensus 377 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 456 (869)
|.+++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..+..+++|++|++++|+|++.++
T Consensus 64 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555444
No 378
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.5e-18 Score=205.14 Aligned_cols=163 Identities=23% Similarity=0.281 Sum_probs=106.3
Q ss_pred EccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccc
Q 002897 203 GLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFL 282 (869)
Q Consensus 203 ~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 282 (869)
+++.|++. ..+..+..+.. |+.|+|++|.+. .+|..+..+++|++|+|++|.|. .+|..|+.+++|++|+|++|.|
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~-L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQL-WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp ----------------CCCC-CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred ccccccee-cChhhhccCCC-CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 34455554 45666666665 888888888877 66666778888888888888887 7778888888888888888888
Q ss_pred cCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCccc
Q 002897 283 HGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSE 362 (869)
Q Consensus 283 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~ 362 (869)
+ .+|..|+++++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+.........++|++|.+++.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 8 66888888888888888888887 677778888888888888888886666655544333334666777776666543
Q ss_pred ccCCccccccccccc
Q 002897 363 IGNLKNLVQLDISGN 377 (869)
Q Consensus 363 ~~~l~~L~~L~L~~N 377 (869)
|+.|++++|
T Consensus 361 ------l~~l~l~~n 369 (727)
T 4b8c_D 361 ------RRFIEINTD 369 (727)
T ss_dssp ---------------
T ss_pred ------cceeEeecc
Confidence 344555555
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.9e-17 Score=162.29 Aligned_cols=177 Identities=20% Similarity=0.233 Sum_probs=137.9
Q ss_pred CEEEccCccccCcCCCCCCCCccccceecccccccccCCc-CccCccccceeeccCcccCCCCCccccccccccceeccc
Q 002897 273 QSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPS-SLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLS 351 (869)
Q Consensus 273 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~ 351 (869)
+.+++++|.++ .+|..+.. +|+.|++++|+|++..+. .|..+++|+.|+|++|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~------------------- 68 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG------------------- 68 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCC-------------------
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCC-------------------
Confidence 78999999997 56665544 899999999999966654 48999999999999998873
Q ss_pred CCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCC
Q 002897 352 DNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQI 431 (869)
Q Consensus 352 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 431 (869)
..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|++++..
T Consensus 69 ------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 69 ------IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp ------BCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred ------cCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 45677888999999999999999888888999999999999999999888999999999999999999999776
Q ss_pred ccccccccccCeeccccccCcccCCCCCccCCCccccccCCcccCCCCC
Q 002897 432 PKYLENLSFLEYLNLSYNHFEGEVPKKGVFSNKTRFSLSGNGKLCGGLD 480 (869)
Q Consensus 432 p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 480 (869)
+... -...++...+.++...+..|.. +....-..+..+...|.+..
T Consensus 143 ~l~~-~~~~l~~~~~~~~~~~C~~P~~--l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 143 HLAW-FAEWLRKKSLNGGAARCGAPSK--VRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp GGHH-HHHHHHHHCCSGGGCBBCSSTT--TTTSBGGGSCTTTCCCCCC-
T ss_pred cchH-HHHHHHHcCCCCCCCCCCCChH--HcCCChhhCcHhhcCcCCCC
Confidence 5221 1112333445556555554442 44555556777777786543
No 380
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=2.2e-18 Score=203.63 Aligned_cols=162 Identities=19% Similarity=0.199 Sum_probs=110.9
Q ss_pred CcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccc
Q 002897 77 IGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFI 156 (869)
Q Consensus 77 L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~ 156 (869)
++.|.+. ..|..|..+.+|+.|+|++|.+. .+|...+ .+++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 4445555 55677777788888888888876 7776544 7788888888888887 66778889999999999999988
Q ss_pred cccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccc
Q 002897 157 GKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSG 236 (869)
Q Consensus 157 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~ 236 (869)
. +|..|..+++|++|+|++|.|+.++. .|..+++|++|+|++|.|++.+|..+......+..|+|++|.+++
T Consensus 284 ~-lp~~~~~l~~L~~L~L~~N~l~~lp~-------~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 284 S-LPAELGSCFQLKYFYFFDNMVTTLPW-------EFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp S-CCSSGGGGTTCSEEECCSSCCCCCCS-------STTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred c-cChhhcCCCCCCEEECCCCCCCccCh-------hhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 4 47788999999999999999987765 388899999999999999988888877654334456778888776
Q ss_pred cCCccccCCCCCCeeecccC
Q 002897 237 TIPPGLGNLVHLNSIAMEGN 256 (869)
Q Consensus 237 ~~~~~~~~l~~L~~L~l~~n 256 (869)
.+|.. |..|+++.|
T Consensus 356 ~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 356 PLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCCC---------------
T ss_pred cCccc------cceeEeecc
Confidence 66653 344555555
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=2e-17 Score=161.87 Aligned_cols=125 Identities=21% Similarity=0.321 Sum_probs=69.1
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++|+++ +||..++ .+|++|+|++|+|+ .+|..|.++++|++|+|++|+|+++.+.+|.++++|++|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 345555555 5555443 35555555555555 444555555555555555555555444555555555555555555
Q ss_pred cCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFI 156 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~ 156 (869)
|+++.|..|.++++|++|+|++|++. ...+..|..+++|+.|+|++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDIS-------------------------VVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCC-------------------------BCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCC-------------------------eeChhhhhcCccccEEEeCCCCee
Confidence 55544445555555555555555554 444445666666777777777664
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=3.5e-17 Score=156.81 Aligned_cols=137 Identities=16% Similarity=0.151 Sum_probs=102.6
Q ss_pred cCCcCEEeccCCcCc-cccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEE
Q 002897 21 LFKLENLSLAENHLT-GQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFI 99 (869)
Q Consensus 21 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 99 (869)
.++|+.|+|++|+++ +.+|..|..+++|++|+|++|.|+.. ..|+.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999998 67888889999999999999999855 788899999999999999997788888889999999
Q ss_pred ECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC---cCccCCCCCCEEEccC
Q 002897 100 FLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS---INFNSLKNLSVLILGN 176 (869)
Q Consensus 100 ~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~l~~ 176 (869)
+|++|++. .+|. +..+..+++|++|++++|.++++.+ ..|..+++|++|++++
T Consensus 101 ~Ls~N~l~-~~~~-----------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 101 NLSGNKLK-DIST-----------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ECBSSSCC-SSGG-----------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred eccCCccC-cchh-----------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 99999887 4432 1344455555666666665554443 3455566666666666
Q ss_pred ccCCCCC
Q 002897 177 NHLGNRA 183 (869)
Q Consensus 177 n~l~~~~ 183 (869)
|.+..++
T Consensus 157 n~~~~~~ 163 (168)
T 2ell_A 157 REDQEAP 163 (168)
T ss_dssp TTSCBCC
T ss_pred CChhhcc
Confidence 6655554
No 383
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.69 E-value=4.5e-16 Score=171.27 Aligned_cols=336 Identities=14% Similarity=0.095 Sum_probs=245.5
Q ss_pred cCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCc
Q 002897 33 HLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPF 112 (869)
Q Consensus 33 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 112 (869)
.++.+-..+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ +. .+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecc
Confidence 355566677888888888888744 66566778888888888888755 66566778888888888777655 33 4555
Q ss_pred hhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhh
Q 002897 113 DMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTV 192 (869)
Q Consensus 113 ~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 192 (869)
.+|.+...++.... +.+..+...+|.++++|+.+.+.++. ..+....|.++.+|+.+.+..| ++.++.. +
T Consensus 134 ~aF~~~~~~~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~------~ 203 (394)
T 4fs7_A 134 EAFKGCDFKEITIP--EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDY------C 203 (394)
T ss_dssp TTTTTCCCSEEECC--TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTT------T
T ss_pred eeeecccccccccC--ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCch------h
Confidence 66776654433322 23333456788999999999997664 5677888999999999998776 6666654 6
Q ss_pred ccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCC
Q 002897 193 LANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNL 272 (869)
Q Consensus 193 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 272 (869)
|.++..|+.+.+..+... ... ...... .|+.+.+..+. +.+....|..+..|+.+.+..+... +....|.....+
T Consensus 204 F~~~~~L~~i~~~~~~~~-i~~-~~~~~~-~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l 278 (394)
T 4fs7_A 204 FAECILLENMEFPNSLYY-LGD-FALSKT-GVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGL 278 (394)
T ss_dssp TTTCTTCCBCCCCTTCCE-ECT-TTTTTC-CCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTC
T ss_pred hccccccceeecCCCceE-eeh-hhcccC-CCceEEECCCc-eecccccccccccceeEEcCCCcce-eecccccccccc
Confidence 888889998888776543 222 222333 38888887543 4366678889999999999887654 777888999999
Q ss_pred CEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccC
Q 002897 273 QSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSD 352 (869)
Q Consensus 273 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~ 352 (869)
+.+....+.+ ....|..+.+|+.+.+..+ ++.+...+|.++++|+.+++.++ ++
T Consensus 279 ~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~--------------------- 332 (394)
T 4fs7_A 279 KKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE--------------------- 332 (394)
T ss_dssp CEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC---------------------
T ss_pred ceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc---------------------
Confidence 9998877653 3457888999999999765 66567788999999999988643 33
Q ss_pred CcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEE
Q 002897 353 NLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVL 420 (869)
Q Consensus 353 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 420 (869)
..-..+|.++++|+.+++..| ++.....+|.+|.+|+.+++..+ ++ .+..+|.+.++|+.+
T Consensus 333 ----~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 333 ----EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp ----EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred ----EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 133467888999999999877 66566778999999999999865 33 345678777777764
No 384
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.68 E-value=6.8e-16 Score=169.89 Aligned_cols=336 Identities=13% Similarity=0.089 Sum_probs=209.0
Q ss_pred ccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceecc
Q 002897 57 RLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLP 136 (869)
Q Consensus 57 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~ 136 (869)
.++.+-..+|.++++|+.+.|..+ ++.+...+|.++++|+.++|..+ +. .++..+|.++.+|+.+.+..+ +..+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecc
Confidence 466566788999999999999754 77677788999999999999766 54 677788888888888777644 555666
Q ss_pred ccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChh
Q 002897 137 ISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHS 216 (869)
Q Consensus 137 ~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 216 (869)
.+|.++..+........ ..+...+|.++++|+.+.+..+ +..++.. +|.++.+|+.+.+..| ++.+....
T Consensus 134 ~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~------~F~~c~~L~~i~l~~~-~~~I~~~~ 203 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDS-METLHNG------LFSGCGKLKSIKLPRN-LKIIRDYC 203 (394)
T ss_dssp TTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTT-CCEECTT------TTTTCTTCCBCCCCTT-CCEECTTT
T ss_pred eeeecccccccccCccc--cccchhhhcccCCCcEEecCCc-cceeccc------cccCCCCceEEEcCCC-ceEeCchh
Confidence 77877765554444333 3456677888888888888654 3445443 5777778877777655 43344444
Q ss_pred hhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccc
Q 002897 217 LANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTML 296 (869)
Q Consensus 217 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 296 (869)
|.+... |+.+.+..+... +.+.+.....|+.+.+..+ +..+....+....+|+.+.+..+... +....|..+..+
T Consensus 204 F~~~~~-L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l 278 (394)
T 4fs7_A 204 FAECIL-LENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGL 278 (394)
T ss_dssp TTTCTT-CCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTC
T ss_pred hccccc-cceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eecccccccccc
Confidence 444443 555554444322 1222333345555555332 22244444555555555555544332 444455555555
Q ss_pred cceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccccccc
Q 002897 297 TLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQLDISG 376 (869)
Q Consensus 297 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 376 (869)
+.+....+.+. ...|..+.+|+.+.+..+ ++..-..+|.++++|+.++|.+
T Consensus 279 ~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~--------------------------i~~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 279 KKVIYGSVIVP---EKTFYGCSSLTEVKLLDS--------------------------VKFIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp CEEEECSSEEC---TTTTTTCTTCCEEEECTT--------------------------CCEECTTTTTTCTTCCEECCCT
T ss_pred ceeccCceeec---cccccccccccccccccc--------------------------cceechhhhcCCCCCCEEEeCC
Confidence 55554443322 234455555555544332 2223445678888888888865
Q ss_pred ccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCee
Q 002897 377 NRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYL 444 (869)
Q Consensus 377 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l 444 (869)
+ ++.....+|.+|.+|+.+.+..| ++.....+|.++++|+.+++..| ++ .+...|.++++|+.+
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 4 66455678888888888888776 66455667888888888888655 33 345667777777654
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.2e-16 Score=154.55 Aligned_cols=127 Identities=24% Similarity=0.364 Sum_probs=89.3
Q ss_pred CEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCC
Q 002897 25 ENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSN 104 (869)
Q Consensus 25 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N 104 (869)
+.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666666 4444332 45666666666665 45556666666666666666666555555555555555555555
Q ss_pred cCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 105 RFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 105 ~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
+++ .+.+..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~-------------------------~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLR-------------------------CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCC-------------------------BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccC-------------------------EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 554 455667888999999999999999998889999999999999999985
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.66 E-value=2.5e-16 Score=152.28 Aligned_cols=132 Identities=18% Similarity=0.303 Sum_probs=74.0
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
.+.+++++|+++ .+|..+ .++|++|++++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 345555555555 333322 24555555555555544444455555555555555555544444455555555555555
Q ss_pred CcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCcccccc
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM 159 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~ 159 (869)
|+++ .+|...|..+++|+.|++++|.+++..+..|..+++|++|+|++|.+.+..
T Consensus 86 N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCcc-ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 5555 444445555555555666666555555555666777777777777765433
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.1e-16 Score=150.04 Aligned_cols=130 Identities=20% Similarity=0.188 Sum_probs=93.6
Q ss_pred ccCCcCEEeccCCcCc-cccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcE
Q 002897 20 YLFKLENLSLAENHLT-GQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEF 98 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 98 (869)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|++++. ..|+.+++|++|+|++|++++.+|..+.++++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3467889999999988 67888888889999999999988855 67888889999999999888767888888888888
Q ss_pred EECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccC---cCccCCCCCCEEEcc
Q 002897 99 IFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS---INFNSLKNLSVLILG 175 (869)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~l~ 175 (869)
|++++|++. .+| .+..+..+++|++|++++|.+++..+ ..|..+++|+.|+++
T Consensus 93 L~ls~N~i~-~~~-----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 93 LNLSGNKIK-DLS-----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECTTSCCC-SHH-----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcCC-ChH-----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 888888886 332 11344445555555555555554443 345555555555543
No 388
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.4e-16 Score=152.69 Aligned_cols=139 Identities=20% Similarity=0.221 Sum_probs=101.5
Q ss_pred cCCCEEEccCCccC-ccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhh
Q 002897 46 SALQVIDIRGNRLG-GKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKF 124 (869)
Q Consensus 46 ~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 124 (869)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++.
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~----------------- 84 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIF----------------- 84 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCC-----------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCc-----------------
Confidence 56677777777666 45566666666666666666666643 55555666666666666554
Q ss_pred hccccccceeccccccCCCCCcEEEccCCccccccC-cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEE
Q 002897 125 VAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMS-INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLG 203 (869)
Q Consensus 125 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~ 203 (869)
+.+|..+.++++|++|+|++|.++++.. ..|..+++|++|++++|.++.++.. ....+..+++|++|+
T Consensus 85 --------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 85 --------GGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDY---RESVFKLLPQLTYLD 153 (168)
T ss_dssp --------SCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTH---HHHHHTTCSSCCEET
T ss_pred --------hHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHH---HHHHHHhCccCcEec
Confidence 3345566678999999999999987643 7899999999999999999887641 112688999999999
Q ss_pred ccCCCCCCCCCh
Q 002897 204 LYDNQFGGLLPH 215 (869)
Q Consensus 204 L~~n~l~~~~~~ 215 (869)
+++|.+.. .|.
T Consensus 154 l~~n~~~~-~~~ 164 (168)
T 2ell_A 154 GYDREDQE-APD 164 (168)
T ss_dssp TEETTSCB-CCS
T ss_pred CCCCChhh-ccc
Confidence 99999974 443
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=3e-16 Score=166.72 Aligned_cols=141 Identities=14% Similarity=0.182 Sum_probs=103.5
Q ss_pred HHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccc--------------hh--------hHHHHHHHHHHHhC
Q 002897 551 KATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK--------------GA--------LKSFLTECEALRSI 608 (869)
Q Consensus 551 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~--------~~~~~~E~~~l~~l 608 (869)
....=|++.++||+|++|.||+|.+. +|+.||||+++.... .. .....+|...+.++
T Consensus 92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL 170 (397)
T 4gyi_A 92 ARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL 170 (397)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 33344889999999999999999986 799999999753210 00 01124577777777
Q ss_pred CCCcc--ceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 002897 609 RHRNL--IKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPV 686 (869)
Q Consensus 609 ~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 686 (869)
.+.++ ...+++ ...++||||++|++|.++... .....++.|++.+|.|||+. ||
T Consensus 171 ~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~~---gI 226 (397)
T 4gyi_A 171 YEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAKH---GL 226 (397)
T ss_dssp HHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHHT---TE
T ss_pred HhcCCCCCeeeec---------cCceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHHC---CC
Confidence 54433 333333 234799999999888654321 13456789999999999999 99
Q ss_pred EecCCCCCceeecCCC----------cEEEccccccccCC
Q 002897 687 VHGDLKPSNVLLDHDM----------VAHVGDFGLAKFLP 716 (869)
Q Consensus 687 vH~Dlkp~NIll~~~~----------~~kl~Dfg~a~~~~ 716 (869)
|||||||.|||+++++ .+.|+||+.+....
T Consensus 227 VHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 227 IHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred cCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9999999999998876 38999999886543
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=9.3e-16 Score=148.21 Aligned_cols=128 Identities=19% Similarity=0.234 Sum_probs=64.9
Q ss_pred CEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccc
Q 002897 49 QVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAK 128 (869)
Q Consensus 49 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~ 128 (869)
+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++. .+|...|..+++|+.|++++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQ-SLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcce-EeChhHccCCCccCEEECCC
Confidence 44555555555 3332222 35555555555555444444455555555555555554 44444455555555555555
Q ss_pred cccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCC
Q 002897 129 NNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 129 n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~ 180 (869)
|++++..+..|..+++|++|++++|+++++.+..|..+++|++|++++|.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 5555444444555555555555555555444444555555555555555544
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=3.7e-16 Score=150.80 Aligned_cols=146 Identities=16% Similarity=0.187 Sum_probs=94.5
Q ss_pred CcccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCc-CCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 1 MFDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLS-ALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 1 ~l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
|+.+..+.+. ..|.. ....+|+.|+|++|+++. +|. +..+. +|++|+|++|+|++. ..|+.+++|++|+|++
T Consensus 1 m~~lt~~~i~-~~~~~--~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~ 73 (176)
T 1a9n_A 1 MVKLTAELIE-QAAQY--TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNN 73 (176)
T ss_dssp -CCCCHHHHH-TSCEE--ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCS
T ss_pred CccccHHHHH-HHHhc--CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCC
Confidence 3444555555 44443 356788888888888884 454 44444 888888888888854 5788888888888888
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCcccCCc-hhhcCCcchhhhhccccccceeccc----cccCCCCCcEEEccCCc
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPF-DMVANLPNLRKFVAAKNNLTGFLPI----SLSNASNLELLELRDNQ 154 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~----~l~~l~~L~~L~L~~N~ 154 (869)
|+|++..+..|.++++|++|+|++|++. .+|. ..+..+++|+.|++++|.++.. |. .+..+++|++||+++|.
T Consensus 74 N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 74 NRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp SCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECC
T ss_pred CcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCC
Confidence 8888665566688888888888888885 5553 2344555555555555555432 22 24444555555555444
Q ss_pred c
Q 002897 155 F 155 (869)
Q Consensus 155 i 155 (869)
+
T Consensus 152 ~ 152 (176)
T 1a9n_A 152 L 152 (176)
T ss_dssp H
T ss_pred H
Confidence 3
No 392
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5e-16 Score=145.41 Aligned_cols=132 Identities=21% Similarity=0.239 Sum_probs=103.5
Q ss_pred CcCCCEEEccCCccC-ccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhh
Q 002897 45 LSALQVIDIRGNRLG-GKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRK 123 (869)
Q Consensus 45 l~~L~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 123 (869)
.++|++|++++|.++ +.+|..++.+++|++|+|++|.+++. ..+.++++|++|+|++|++.+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~--------------- 78 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSG--------------- 78 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCS---------------
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccc---------------
Confidence 367888888888887 67777788888888888888888754 667777777777777777762
Q ss_pred hhccccccceeccccccCCCCCcEEEccCCcccccc-CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEE
Q 002897 124 FVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKM-SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENL 202 (869)
Q Consensus 124 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L 202 (869)
.+|..+..+++|++|++++|+++++. +..+..+++|++|++++|.++.++.. ....+..+++|++|
T Consensus 79 ----------~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~l~~L~~L 145 (149)
T 2je0_A 79 ----------GLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY---RENVFKLLPQLTYL 145 (149)
T ss_dssp ----------CTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTH---HHHHHHHCTTCCEE
T ss_pred ----------hHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHH---HHHHHHHCCCcccc
Confidence 24455667889999999999998753 47899999999999999999887641 01258889999999
Q ss_pred EccC
Q 002897 203 GLYD 206 (869)
Q Consensus 203 ~L~~ 206 (869)
++++
T Consensus 146 ~l~d 149 (149)
T 2je0_A 146 DGYD 149 (149)
T ss_dssp TTBC
T ss_pred cCCC
Confidence 9874
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.9e-17 Score=161.99 Aligned_cols=154 Identities=23% Similarity=0.262 Sum_probs=118.8
Q ss_pred hccCCcCEEeccCCcCccccCc------ccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCccccc
Q 002897 19 CYLFKLENLSLAENHLTGQLPV------SIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYN 92 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~ 92 (869)
....+++.++++.+.+++..|. .|..+++|++|+|++|+|++ +| .++++++|++|+|++|+|+ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3567888888888888877776 88999999999999999985 66 8888999999999999998 56778888
Q ss_pred CCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceecc-ccccCCCCCcEEEccCCccccccCcC---------
Q 002897 93 ISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLP-ISLSNASNLELLELRDNQFIGKMSIN--------- 162 (869)
Q Consensus 93 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~N~i~~~~~~~--------- 162 (869)
+++|++|+|++|++. .+| .+..+++|+.|++++|.++...+ ..+..+++|++|++++|.+.+..+..
T Consensus 92 ~~~L~~L~L~~N~l~-~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 92 ADTLEELWISYNQIA-SLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHCSEEEEEEEECC-CHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred CCcCCEEECcCCcCC-cCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 888999999999887 455 47778888888888888875433 46778888888888888876655432
Q ss_pred -ccCCCCCCEEEccCccCC
Q 002897 163 -FNSLKNLSVLILGNNHLG 180 (869)
Q Consensus 163 -~~~l~~L~~L~l~~n~l~ 180 (869)
+..+++|+.|+ +|.++
T Consensus 169 ~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHCSSCSEEC--CGGGT
T ss_pred HHHhCCCcEEEC--CcccC
Confidence 55566666554 44443
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.4e-15 Score=146.70 Aligned_cols=112 Identities=17% Similarity=0.265 Sum_probs=70.4
Q ss_pred cccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCc
Q 002897 40 VSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLP 119 (869)
Q Consensus 40 ~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 119 (869)
..+.++.+|++|+|++|+++ .+|......++|++|+|++|+|++. ..|.++++|++|+|++|++. .+|.+.|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCC
Confidence 34677788888888888888 4454333334888888888888754 56777778888888888776 55544445555
Q ss_pred chhhhhccccccceeccc--cccCCCCCcEEEccCCccc
Q 002897 120 NLRKFVAAKNNLTGFLPI--SLSNASNLELLELRDNQFI 156 (869)
Q Consensus 120 ~L~~L~l~~n~i~~~~~~--~l~~l~~L~~L~L~~N~i~ 156 (869)
+|++|++++|.|+. +|. .+..+++|++|++++|.+.
T Consensus 89 ~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 89 DLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp TCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 55555555555542 222 4444455555555555444
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=1.1e-14 Score=139.18 Aligned_cols=102 Identities=24% Similarity=0.345 Sum_probs=85.2
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++|+++ +||..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++|+
T Consensus 14 l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 678888888 7887764 688888888888887778888888888888888888887777778888888888888888
Q ss_pred cCccCCcccccCCCCcEEECcCCcCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFH 107 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~ 107 (869)
|+++.+..|.++++|++|+|++|.+.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 88776777888888888888888886
No 396
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.54 E-value=4.3e-13 Score=147.41 Aligned_cols=335 Identities=11% Similarity=0.111 Sum_probs=171.7
Q ss_pred ccccCcccccCc-CCCEEEccCCccCccCCccccCCCCCCEEeCcCcc---cCccCCcccccCCCCcEEECcCCcCcccC
Q 002897 35 TGQLPVSIGNLS-ALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ---FSGFIPPSIYNISSFEFIFLQSNRFHGSL 110 (869)
Q Consensus 35 ~~~~~~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~---i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 110 (869)
+.+-..+|.+++ .|+.+.+-.+ ++.+-..+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ +. .+
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I 128 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EI 128 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EE
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-ee
Confidence 334445566653 4666666543 444556666666666666666553 44445556666666666655544 32 45
Q ss_pred CchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchh
Q 002897 111 PFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFV 190 (869)
Q Consensus 111 ~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 190 (869)
+..+|.++.+|+.+.+..+ +..+...+|..+.+|+.+.+.++ ++.+...+|.. .+|+.+.+..+- ..+...
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~-~~i~~~----- 199 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKV-TRIGTN----- 199 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTC-CEECTT-----
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcc-cccccc-----
Confidence 5566666666666666533 34455667777777777777655 45566666654 567777775542 233322
Q ss_pred hhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCC
Q 002897 191 TVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLK 270 (869)
Q Consensus 191 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 270 (869)
+|..+.+|.......+..... ...+......... ....+.....+..+.+. +.+..+...+|.++.
T Consensus 200 -af~~c~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~ 265 (394)
T 4gt6_A 200 -AFSECFALSTITSDSESYPAI-DNVLYEKSANGDY-----------ALIRYPSQREDPAFKIP-NGVARIETHAFDSCA 265 (394)
T ss_dssp -TTTTCTTCCEEEECCSSSCBS-SSCEEEECTTSCE-----------EEEECCTTCCCSEEECC-TTEEEECTTTTTTCS
T ss_pred -hhhhccccceecccccccccc-cceeecccccccc-----------cccccccccccceEEcC-CcceEcccceeeecc
Confidence 567777777776665554421 1111110000000 00011122223333332 223334455566666
Q ss_pred CCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecc
Q 002897 271 NLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNL 350 (869)
Q Consensus 271 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l 350 (869)
+|+.+.+.++... +....|.+++.|+.+.+. +.++.....+|.++.+|+.+++..+ ++
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~------------------- 323 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT------------------- 323 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-------------------
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-------------------
Confidence 6666666544332 555566666666666664 3344344556666666666665432 22
Q ss_pred cCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcc
Q 002897 351 SDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKL 427 (869)
Q Consensus 351 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 427 (869)
..-..+|.++.+|+.+.+..+ ++.....+|.+|++|+.+++.+|.... .++.....|+.+.+..|.+
T Consensus 324 ------~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 324 ------QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ------EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred ------EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 022345566666666666443 443444566666666666666655431 3444555666666555543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.53 E-value=1.8e-14 Score=138.10 Aligned_cols=102 Identities=24% Similarity=0.352 Sum_probs=84.8
Q ss_pred cccCCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcc
Q 002897 2 FDAQNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQ 81 (869)
Q Consensus 2 l~l~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 81 (869)
+|+++|+++ +||..++ ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+++.+..|+++++|++|+|++|+
T Consensus 17 l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 17 VNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 678888888 8888775 788888888888887778888888888888888888887666677888888888888888
Q ss_pred cCccCCcccccCCCCcEEECcCCcCc
Q 002897 82 FSGFIPPSIYNISSFEFIFLQSNRFH 107 (869)
Q Consensus 82 i~~~~p~~~~~l~~L~~L~Ls~N~l~ 107 (869)
|+++.+..|.++++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 88666666888888888888888886
No 398
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=7e-17 Score=159.22 Aligned_cols=83 Identities=20% Similarity=0.209 Sum_probs=37.9
Q ss_pred CccccccccccccccccCCccccCCCCCcEEEeeCccccCCCC-ccccccccccEEEccCCcccCCCcc----------c
Q 002897 366 LKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIP-PSLNFLKSIKVLDLSSNKLSGQIPK----------Y 434 (869)
Q Consensus 366 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----------~ 434 (869)
+++|++|+|++|.+++ +| .+..+++|+.|++++|++++..+ ..+..+++|++|++++|++++.+|. .
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~ 169 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEV 169 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHH
Confidence 3444444444444442 22 34444444444444444442111 2344455555555555555444333 2
Q ss_pred cccccccCeeccccccCc
Q 002897 435 LENLSFLEYLNLSYNHFE 452 (869)
Q Consensus 435 ~~~l~~L~~l~l~~N~l~ 452 (869)
+..+++|+.|| +|+++
T Consensus 170 ~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHCSSCSEEC--CGGGT
T ss_pred HHhCCCcEEEC--CcccC
Confidence 55666666665 55554
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.51 E-value=9.4e-13 Score=144.70 Aligned_cols=337 Identities=10% Similarity=0.112 Sum_probs=206.9
Q ss_pred ccCccCCccccCCC-CCCEEeCcCcccCccCCcccccCCCCcEEECcCCc---CcccCCchhhcCCcchhhhhccccccc
Q 002897 57 RLGGKIPDTLGQLR-KLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNR---FHGSLPFDMVANLPNLRKFVAAKNNLT 132 (869)
Q Consensus 57 ~i~~~~p~~~~~l~-~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~~l~~L~~L~l~~n~i~ 132 (869)
.++.+-..+|.+++ .|+.+.|..+ ++.+-..+|.++++|+.+.++.|. ++ .++..+|.++.+|+.+.+..+ ++
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~ 126 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VT 126 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CS
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cc
Confidence 35556677888875 5999999765 776778899999999999998774 54 677778888888887777654 55
Q ss_pred eeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCC
Q 002897 133 GFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGL 212 (869)
Q Consensus 133 ~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 212 (869)
.+...+|..+.+|+.+.+..+ +..+....|..+.+|+.+.+..+ +..++.. +|.. .+|+.+.+..+-.. .
T Consensus 127 ~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~------aF~~-~~l~~i~ip~~~~~-i 196 (394)
T 4gt6_A 127 EIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER------AFTG-TALTQIHIPAKVTR-I 196 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT------TTTT-CCCSEEEECTTCCE-E
T ss_pred eehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccc------cccc-cceeEEEECCcccc-c
Confidence 566677888888888888654 45666777777777777777654 5555443 3432 45666666543322 3
Q ss_pred CChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCC
Q 002897 213 LPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGN 292 (869)
Q Consensus 213 ~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 292 (869)
...++..... ++......+.... ....+. ..+.........+.....+..+.+.+ .++.+....|.+
T Consensus 197 ~~~af~~c~~-l~~~~~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~ 263 (394)
T 4gt6_A 197 GTNAFSECFA-LSTITSDSESYPA-IDNVLY----------EKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDS 263 (394)
T ss_dssp CTTTTTTCTT-CCEEEECCSSSCB-SSSCEE----------EECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTT
T ss_pred ccchhhhccc-cceeccccccccc-ccceee----------cccccccccccccccccccceEEcCC-cceEcccceeee
Confidence 3334443332 4444433332221 111000 00000000000111223444455432 344456667888
Q ss_pred CccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCCcccCCCcccccCCcccccc
Q 002897 293 LTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDNLLSGSLPSEIGNLKNLVQL 372 (869)
Q Consensus 293 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N~l~~~~p~~~~~l~~L~~L 372 (869)
++.|+.+.+..+... ....+|.++++|+.+.+.. .++ .....+|.++.+|+.+
T Consensus 264 c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~-------------------------~I~~~aF~~c~~L~~i 316 (394)
T 4gt6_A 264 CAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RIT-------------------------ELPESVFAGCISLKSI 316 (394)
T ss_dssp CSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCC-------------------------EECTTTTTTCTTCCEE
T ss_pred cccccEEecccccce-ecCcccccccccccccCCC-ccc-------------------------ccCceeecCCCCcCEE
Confidence 888888888765443 5667778888888777742 222 1334578888899999
Q ss_pred ccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcccCCCccccccccccCeeccccccC
Q 002897 373 DISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKLSGQIPKYLENLSFLEYLNLSYNHF 451 (869)
Q Consensus 373 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 451 (869)
+|..+ ++.....+|.+|.+|+.+.+..+ ++.....+|.++.+|+.+++.+|... -..+..+.+|+.+.+..|.+
T Consensus 317 ~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 317 DIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred EeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 88765 55466778999999999999755 66455678889999999999888654 14667778888888776654
No 400
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=5e-14 Score=134.61 Aligned_cols=106 Identities=21% Similarity=0.262 Sum_probs=67.5
Q ss_pred ecccCCcccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCCcc
Q 002897 348 LNLSDNLLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSNKL 427 (869)
Q Consensus 348 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 427 (869)
+++++|.++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 14 l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 444444444 3444332 5666677777777666666666777777777777777655555566677777777777777
Q ss_pred cCCCccccccccccCeeccccccCcccCC
Q 002897 428 SGQIPKYLENLSFLEYLNLSYNHFEGEVP 456 (869)
Q Consensus 428 ~~~~p~~~~~l~~L~~l~l~~N~l~~~~~ 456 (869)
++..+..|..+++|+.|+|++|++++.++
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 65555566677777777777777766554
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=1.2e-13 Score=132.41 Aligned_cols=102 Identities=18% Similarity=0.240 Sum_probs=63.7
Q ss_pred cCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcC
Q 002897 24 LENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQS 103 (869)
Q Consensus 24 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~ 103 (869)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 366777777776 5555553 6777777777777766677777777777777777777765555566677777777777
Q ss_pred CcCcccCCchhhcCCcchhhhhcccc
Q 002897 104 NRFHGSLPFDMVANLPNLRKFVAAKN 129 (869)
Q Consensus 104 N~l~~~~~~~~~~~l~~L~~L~l~~n 129 (869)
|++. .+|...|..+++|+.|+|++|
T Consensus 91 N~l~-~l~~~~~~~l~~L~~L~L~~N 115 (174)
T 2r9u_A 91 NHLK-SIPRGAFDNLKSLTHIYLYNN 115 (174)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSS
T ss_pred Cccc-eeCHHHhccccCCCEEEeCCC
Confidence 7665 444333333333333333333
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=7.9e-15 Score=158.75 Aligned_cols=83 Identities=20% Similarity=0.202 Sum_probs=49.9
Q ss_pred cccccCCCCCcEEEccCCcccccc----CcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 136 PISLSNASNLELLELRDNQFIGKM----SINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 136 ~~~l~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
+.++..+++|++|+|++|.|+... ...+...++|++|+|++|.|+..+.. .++.++..+++|++|+|++|.|+.
T Consensus 176 ~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~--~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 176 MEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAAL--ALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHH--HHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHH--HHHHHHHhCCCCCEEeccCCCCCH
Confidence 344556677777777777765432 33455566777777777777654332 234455566777777777777765
Q ss_pred CCChhhhhc
Q 002897 212 LLPHSLANL 220 (869)
Q Consensus 212 ~~~~~~~~l 220 (869)
.....+..+
T Consensus 254 ~g~~~L~~~ 262 (372)
T 3un9_A 254 EGRQVLRDL 262 (372)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 544444443
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=9.2e-13 Score=142.30 Aligned_cols=102 Identities=19% Similarity=0.217 Sum_probs=81.4
Q ss_pred cccCCC-cccccCChhhhhccCCcCEEeccC-CcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 2 FDAQNN-KLVGDIPVEIGCYLFKLENLSLAE-NHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 2 l~l~~~-~~~~~ip~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
+|++++ +|+ .||. +. .+++|++|+|++ |.|+++.+.+|.++++|++|+|++|+|+++.|.+|++|++|++|+|++
T Consensus 13 v~~~~~n~l~-~ip~-l~-~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LP-GAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCT-TTTT-SC-SCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCC-ccCC-CC-CCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 467777 788 7888 54 678888888885 888877777888888888888888888888888888888888888888
Q ss_pred cccCccCCcccccCCCCcEEECcCCcCc
Q 002897 80 NQFSGFIPPSIYNISSFEFIFLQSNRFH 107 (869)
Q Consensus 80 n~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 107 (869)
|+|+++.+..|..+. |+.|+|++|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 888866666666665 888888888876
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=1.5e-14 Score=156.55 Aligned_cols=140 Identities=16% Similarity=0.140 Sum_probs=68.6
Q ss_pred CCCCEEeCcCcccCccCCcccccC-----CCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceeccccc-----
Q 002897 70 RKLIYLNIGRNQFSGFIPPSIYNI-----SSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISL----- 139 (869)
Q Consensus 70 ~~L~~L~L~~n~i~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l----- 139 (869)
++|++|+|++|.|+......+... .+|++|+|++|.+...........+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 455555666555553322222222 4556666666655421111222233444455555554443222222
Q ss_pred cCCCCCcEEEccCCccccccC----cCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCC
Q 002897 140 SNASNLELLELRDNQFIGKMS----INFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGG 211 (869)
Q Consensus 140 ~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~ 211 (869)
...++|++|+|++|.|+.... ..+..+++|++|+|++|.|+..+.. .++..+..+++|++|+|++|.|+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--LLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--HHHHHGGGCSCCCEEECCSSCCCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--HHHHHHhcCCCcCeEECCCCCCCH
Confidence 234567777777776654222 2234556666666666666543321 223345555666666666666653
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.29 E-value=1.7e-12 Score=140.26 Aligned_cols=130 Identities=21% Similarity=0.209 Sum_probs=89.7
Q ss_pred ecccCC-cccCCCcccccCCcccccccccc-ccccccCCccccCCCCCcEEEeeCccccCCCCccccccccccEEEccCC
Q 002897 348 LNLSDN-LLSGSLPSEIGNLKNLVQLDISG-NRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFLKSIKVLDLSSN 425 (869)
Q Consensus 348 L~l~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 425 (869)
++++++ .|+ .+|. +..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455565 566 4666 78888888888885 8888776777888888888888888888777778888888888888888
Q ss_pred cccCCCccccccccccCeeccccccCcccCCCCC--ccCCCccccccCCcccCCCCC
Q 002897 426 KLSGQIPKYLENLSFLEYLNLSYNHFEGEVPKKG--VFSNKTRFSLSGNGKLCGGLD 480 (869)
Q Consensus 426 ~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~~ 480 (869)
+|++..+..+..++ |+.|+|++|+|.+.+.... .+.......+..+...|..+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 88866555565555 8888888888877654221 111112233444556665443
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.27 E-value=3e-10 Score=124.05 Aligned_cols=289 Identities=12% Similarity=0.071 Sum_probs=202.8
Q ss_pred hccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcE
Q 002897 19 CYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEF 98 (869)
Q Consensus 19 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 98 (869)
....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++.+...+|... +|+.
T Consensus 43 ~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~ 117 (379)
T 4h09_A 43 KDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDD 117 (379)
T ss_dssp GGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSE
T ss_pred ccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Cccc
Confidence 3457788888864 567677788999999999999755 666777888887 6888888654 554666677664 7999
Q ss_pred EECcCCcCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccc------------cCcCccCC
Q 002897 99 IFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGK------------MSINFNSL 166 (869)
Q Consensus 99 L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~------------~~~~~~~l 166 (869)
+.+..+.. .+...+|.+. +|+.+.+.. .++.+...+|..+.+++.+.+..+..... ....+...
T Consensus 118 i~lp~~~~--~i~~~~F~~~-~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 118 FEFPGATT--EIGNYIFYNS-SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp EECCTTCC--EECTTTTTTC-CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred ccCCCccc--cccccccccc-eeeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 99987633 4555566554 455554443 35556677888888888888876543211 12234455
Q ss_pred CCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCC
Q 002897 167 KNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLV 246 (869)
Q Consensus 167 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~ 246 (869)
..+..+.+..+.. .+.. .++..+.+|+.+.+..+ +..+....+.+... |+.+.+..+ ++.+...+|.++.
T Consensus 194 ~~~~~~~~~~~~~-~i~~------~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~-L~~i~lp~~-v~~I~~~aF~~~~ 263 (379)
T 4h09_A 194 KTGTEFTIPSTVK-TVTA------YGFSYGKNLKKITITSG-VTTLGDGAFYGMKA-LDEIAIPKN-VTSIGSFLLQNCT 263 (379)
T ss_dssp CCCSEEECCTTCC-EECT------TTTTTCSSCSEEECCTT-CCEECTTTTTTCSS-CCEEEECTT-CCEECTTTTTTCT
T ss_pred cccccccccccee-EEee------cccccccccceeeeccc-eeEEccccccCCcc-ceEEEcCCC-ccEeCccccceee
Confidence 5666665544322 2221 25677788888888655 44355566666665 888888766 5556677888888
Q ss_pred CCCeeecccCcceecCCccccCCCCCCEEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeecc
Q 002897 247 HLNSIAMEGNQLIGTVPPEIGWLKNLQSLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLS 326 (869)
Q Consensus 247 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 326 (869)
+|+.+.+..+ +..+....|.++++|+.+.+.++.++.+....|.++++|+.+.+..+ ++.+...+|.++++|+.+.+.
T Consensus 264 ~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 264 ALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp TCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred hhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 8888888654 55566778888899999999888888777888889999999988754 665667788899999988886
Q ss_pred Cc
Q 002897 327 KN 328 (869)
Q Consensus 327 ~N 328 (869)
.+
T Consensus 342 ~~ 343 (379)
T 4h09_A 342 KS 343 (379)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.27 E-value=1.2e-11 Score=127.63 Aligned_cols=147 Identities=16% Similarity=0.114 Sum_probs=113.5
Q ss_pred HHHHhcCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCC
Q 002897 549 LSKATSEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNG 627 (869)
Q Consensus 549 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 627 (869)
+......|++...++.|+.+.||++.. .++.+++|+...........+.+|+++++.+. +..+.++++++...
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~---- 82 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD---- 82 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC----
Confidence 344556788888899999999999986 47899999986532233356889999999884 67788898886542
Q ss_pred CceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------
Q 002897 628 VDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC------------------------- 682 (869)
Q Consensus 628 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------- 682 (869)
+..++||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 83 -~~~~lv~e~i~G~~l~~~~~~-----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 83 -GWSNLLMSEADGVLCSEEYED-----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp -TEEEEEEECCSSEEHHHHCCT-----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred -CceEEEEEecCCeehhhccCC-----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 678999999999999876421 1123477899999999999810
Q ss_pred -------------------------------CCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 683 -------------------------------KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 683 -------------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1369999999999999876566799999874
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.22 E-value=6.7e-10 Score=121.31 Aligned_cols=310 Identities=9% Similarity=0.041 Sum_probs=172.3
Q ss_pred cccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCcccCCchhhcCCc
Q 002897 40 VSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLP 119 (869)
Q Consensus 40 ~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 119 (869)
.++....+|+.+.+... ++.+-..+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ +. .++..+|.+.
T Consensus 40 ~~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~- 113 (379)
T 4h09_A 40 PWYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGT- 113 (379)
T ss_dssp TTGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTC-
T ss_pred cccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccC-
Confidence 34667788888888754 56566788999999999999754 666777788877 6777777654 43 5666666654
Q ss_pred chhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCccCCCCCCEEEccCccCCCCCCCCcc------hhhhc
Q 002897 120 NLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINFNSLKNLSVLILGNNHLGNRAANDLD------FVTVL 193 (869)
Q Consensus 120 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------~~~~l 193 (869)
+|+.+.+..+ ++.+...+|.+. +|+.+.+..+ ++.+....|....+++...+..+........... ....+
T Consensus 114 ~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (379)
T 4h09_A 114 DLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESY 190 (379)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEEC
T ss_pred CcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccc
Confidence 6777777654 333445555554 5666655544 4556666677777777776665543322211000 00011
Q ss_pred cCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCcccccCCccccCCCCCCeeecccCcceecCCccccCCCCCC
Q 002897 194 ANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNYFSGTIPPGLGNLVHLNSIAMEGNQLIGTVPPEIGWLKNLQ 273 (869)
Q Consensus 194 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 273 (869)
..+.. +..+.+..+.- ......+.....|+.+.+..+ +..+....|....+|+
T Consensus 191 ~~~~~-------------------------~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~ 243 (379)
T 4h09_A 191 PAAKT-------------------------GTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALD 243 (379)
T ss_dssp CTTCC-------------------------CSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCC
T ss_pred ccccc-------------------------cccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccce
Confidence 22222 33333332221 133445555666666666443 3335555566666666
Q ss_pred EEEccCccccCcCCCCCCCCccccceecccccccccCCcCccCccccceeeccCcccCCCCCccccccccccceecccCC
Q 002897 274 SLYLNSNFLHGYIPSSLGNLTMLTLLALEINNLQGKIPSSLGNCTSLIMLTLSKNKLDGVLPPQILSVTTLSLFLNLSDN 353 (869)
Q Consensus 274 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~l~~L~l~~N 353 (869)
.+.+..+ ++.+....|.++.+|+.+.+..+ +......+|.++++|+.+.+.++.++ .
T Consensus 244 ~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~-------------------- 300 (379)
T 4h09_A 244 EIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-T-------------------- 300 (379)
T ss_dssp EEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-E--------------------
T ss_pred EEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-e--------------------
Confidence 6666554 44455556666666666666533 44344556666666666666655554 1
Q ss_pred cccCCCcccccCCccccccccccccccccCCccccCCCCCcEEEeeCccccCCCCcccccc
Q 002897 354 LLSGSLPSEIGNLKNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNSFSGSIPPSLNFL 414 (869)
Q Consensus 354 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 414 (869)
....+|.++.+|+.+.|..+ ++.....+|.+|.+|+.+.+..+ ++.....+|.+.
T Consensus 301 ----I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 301 ----LEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp ----ECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred ----ehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 12234555555555555433 43334445556666666555443 332333444443
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=3.6e-10 Score=116.52 Aligned_cols=137 Identities=16% Similarity=0.112 Sum_probs=97.0
Q ss_pred cCCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCc--cceEEEEeeccccCCCceE
Q 002897 554 SEFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRN--LIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 554 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~ 631 (869)
.+|.+....+.|..+.||++.. .+|+.+++|+.... ....+..|+++++.+.+.+ +.+++++... .+..
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~-----~~~~ 90 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE-----AGRD 90 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----SSCE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----CCCC
Confidence 3444433334556699999976 36788999997543 2355788999999885444 4567777543 2568
Q ss_pred EEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------
Q 002897 632 AIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC----------------------------- 682 (869)
Q Consensus 632 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------- 682 (869)
++||||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 91 ~~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 91 WLLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp EEEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred EEEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 9999999998884 211 11 2356778888888888741
Q ss_pred --------------------------CCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 683 --------------------------KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 683 --------------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.+.++|+|++|.||++++++.+.|+|||.+.
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=2e-10 Score=122.93 Aligned_cols=82 Identities=10% Similarity=0.060 Sum_probs=41.0
Q ss_pred CcCEEeccCCcCcc-c-------cCcccccCcCCCEEEccCCccC---------ccCCccccCCCCCCEEeCcCcccCcc
Q 002897 23 KLENLSLAENHLTG-Q-------LPVSIGNLSALQVIDIRGNRLG---------GKIPDTLGQLRKLIYLNIGRNQFSGF 85 (869)
Q Consensus 23 ~L~~L~L~~n~l~~-~-------~~~~~~~l~~L~~L~L~~n~i~---------~~~p~~~~~l~~L~~L~L~~n~i~~~ 85 (869)
.++.|.+......+ . +..+...+++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 45666666544331 1 1233455667777777554321 112233455666666666665211 1
Q ss_pred CCcccccCCCCcEEECcCCcCc
Q 002897 86 IPPSIYNISSFEFIFLQSNRFH 107 (869)
Q Consensus 86 ~p~~~~~l~~L~~L~Ls~N~l~ 107 (869)
++. + .+++|++|+|..|.+.
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~ 206 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLP 206 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCC
T ss_pred ecc-c-cCCCCcEEEEecCCCC
Confidence 222 2 2566666666666554
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.89 E-value=2.9e-09 Score=115.26 Aligned_cols=145 Identities=15% Similarity=0.196 Sum_probs=106.3
Q ss_pred CCCeeeeecceEEEEEEECCCCeEEEEEEee--cccc-hhhHHHHHHHHHHHhCC--CCccceEEEEeeccccCCCceEE
Q 002897 558 SSNMVGQGSFGTVFKGIIGENGMLVAVKVLN--LMQK-GALKSFLTECEALRSIR--HRNLIKIITICSSIDFNGVDFKA 632 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~ 632 (869)
..+.++.|.++.||++.. .+..+++|+.. .... .....+.+|+.+++.+. +..+.+++.++.+.. ..+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEEC--SSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 356789999999999987 35678888875 3221 12356788999999996 456788888876532 124578
Q ss_pred EEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 002897 633 IVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC------------------------------ 682 (869)
Q Consensus 633 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------ 682 (869)
+||||++|..+.+... ..++..++..++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS 189 (359)
T ss_dssp EEEECCCCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence 9999999977743111 12678889999999999999999831
Q ss_pred -------------------------CCCeEecCCCCCceeecCCCc--EEEcccccccc
Q 002897 683 -------------------------KPPVVHGDLKPSNVLLDHDMV--AHVGDFGLAKF 714 (869)
Q Consensus 683 -------------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfg~a~~ 714 (869)
.+.++|||++|.||+++.++. +.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987753 68999998864
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=1.7e-09 Score=113.96 Aligned_cols=196 Identities=15% Similarity=0.122 Sum_probs=123.9
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCc--cceEEEEeeccccCCCceEEEEe
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRN--LIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
.+.++.|.+..||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+.... ......++||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~--~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS--ETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC--SSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC--CCCCcceEEE
Confidence 4679999999999864 45889986432 34567899999998883 332 44555543221 1112457899
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC--------------------------------- 682 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 682 (869)
++++|.++.+.... .++..++..++.++++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN--------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHHH--------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCccccc--------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 99999888754332 2778888899999999999999611
Q ss_pred ----------------------CCCeEecCCCCCceeecC--CCcEEEccccccccCCCCCCCCccccCC--CC----CC
Q 002897 683 ----------------------KPPVVHGDLKPSNVLLDH--DMVAHVGDFGLAKFLPARPLDTVVETPS--SS----SG 732 (869)
Q Consensus 683 ----------------------~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--~~----~~ 732 (869)
.+.++|+|++|.||++++ ...+.++||+.+..-+....-....... .. ..
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 247 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSK 247 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHH
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHH
Confidence 245899999999999998 4568899999987543211000000000 00 00
Q ss_pred ccCcccccC-CcccCCCCCCccccchhhhHHHHHHHcCCCCC
Q 002897 733 IKGTVGYIA-PEYGTGSEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 733 ~~gt~~y~a-PE~~~~~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
.....++.. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 248 ~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 248 ILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 000001111 111110 112258999999999999998876
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=6.3e-10 Score=119.07 Aligned_cols=189 Identities=15% Similarity=0.164 Sum_probs=117.6
Q ss_pred ccCCcCEEeccCCcCc---------cccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccCccCCccc
Q 002897 20 YLFKLENLSLAENHLT---------GQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFSGFIPPSI 90 (869)
Q Consensus 20 ~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~ 90 (869)
.+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.+.......+
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l 213 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDI 213 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHH
Confidence 5789999999765432 124456678899999999998412 2333 44 8999999999998875443445
Q ss_pred c--cCCCCcEEECcCC--cCcccCCchhhcCCcchhhhhccccccceeccccccCCCCCcEEEccCCccccccCcCc---
Q 002897 91 Y--NISSFEFIFLQSN--RFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPISLSNASNLELLELRDNQFIGKMSINF--- 163 (869)
Q Consensus 91 ~--~l~~L~~L~Ls~N--~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~i~~~~~~~~--- 163 (869)
. .+++|++|+|+.+ ...+... + ..|.. .+ .-..+++|++|+|++|.+.......+
T Consensus 214 ~~~~lp~L~~L~L~~~~~~~~~~~~---~---~~l~~----------~l--~~~~~p~Lr~L~L~~~~i~~~~~~~la~a 275 (362)
T 2ra8_A 214 LGSDLPNLEKLVLYVGVEDYGFDGD---M---NVFRP----------LF--SKDRFPNLKWLGIVDAEEQNVVVEMFLES 275 (362)
T ss_dssp HHSBCTTCCEEEEECBCGGGTCCSC---G---GGTGG----------GS--CTTTCTTCCEEEEESCTTHHHHHHHHHHC
T ss_pred HHccCCCCcEEEEeccccccccchh---H---HHHHH----------HH--hcCCCCCcCEEeCCCCCCchHHHHHHHhC
Confidence 4 7899999998642 2211100 1 11110 00 00245777777777777653222222
Q ss_pred cCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCCCCCChhhhhccccceEEEecCCc
Q 002897 164 NSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFGGLLPHSLANLSNTMTTIDIGGNY 233 (869)
Q Consensus 164 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~~L~~L~l~~n~ 233 (869)
..+++|++|+|+.|.++..... .++..+..+++|+.|+|++|.++......+.... ...++++.++
T Consensus 276 ~~~~~L~~LdLs~n~L~d~G~~--~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 276 DILPQLETMDISAGVLTDEGAR--LLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSGGGCSEEECCSSCCBHHHHH--HHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred ccCCCCCEEECCCCCCChHHHH--HHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 2467788888888877654322 1222345678888888888887755444555421 3567888876
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.61 E-value=1.7e-07 Score=99.30 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=102.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCC----CccceEEEEeeccccCCCce
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRH----RNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 630 (869)
.+...+.++.|....||++ |..+++|+.... .....+.+|+++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5666778999999999998 566889976432 223568899999988865 234555554 34
Q ss_pred EEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------
Q 002897 631 KAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCK--------------------------- 683 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~--------------------------- 683 (869)
.++||||++|.++.+.... .++..+...++.++++.++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH--------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc--------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 5799999999888643321 26777788888888888888885421
Q ss_pred ---------------------------------CCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 684 ---------------------------------PPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 684 ---------------------------------~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998853
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=3e-09 Score=107.65 Aligned_cols=64 Identities=20% Similarity=0.339 Sum_probs=30.6
Q ss_pred ccCcCCCEEEccCCccCc--cCCccccCCCCCCEEeCcCcccCccCCcccccCC--CCcEEECcCCcCcc
Q 002897 43 GNLSALQVIDIRGNRLGG--KIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNIS--SFEFIFLQSNRFHG 108 (869)
Q Consensus 43 ~~l~~L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~--~L~~L~Ls~N~l~~ 108 (869)
.++++|++|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 344555555555555554 2234444555555555555555533 2222222 55555555555543
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=1.9e-08 Score=97.00 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=56.3
Q ss_pred cccccCcCCCEEEccCC-ccCc----cCCccccCCCCCCEEeCcCcccCcc----CCcccccCCCCcEEECcCCcCcccC
Q 002897 40 VSIGNLSALQVIDIRGN-RLGG----KIPDTLGQLRKLIYLNIGRNQFSGF----IPPSIYNISSFEFIFLQSNRFHGSL 110 (869)
Q Consensus 40 ~~~~~l~~L~~L~L~~n-~i~~----~~p~~~~~l~~L~~L~L~~n~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~ 110 (869)
..+...++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|...-
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34444555555555555 4442 1223334445555555555555421 2233334455555555555554110
Q ss_pred C---chhhcCCcchhhhhc--ccccccee----ccccccCCCCCcEEEccCCccc
Q 002897 111 P---FDMVANLPNLRKFVA--AKNNLTGF----LPISLSNASNLELLELRDNQFI 156 (869)
Q Consensus 111 ~---~~~~~~l~~L~~L~l--~~n~i~~~----~~~~l~~l~~L~~L~L~~N~i~ 156 (869)
- ...+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 0 112333344555555 44544422 2345555677778888777764
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.4e-08 Score=97.84 Aligned_cols=124 Identities=16% Similarity=0.120 Sum_probs=64.5
Q ss_pred ccccCCCCCCEEeCcCc-ccCcc----CCcccccCCCCcEEECcCCcCcccCCchhhcCCcchhhhhccccccceecccc
Q 002897 64 DTLGQLRKLIYLNIGRN-QFSGF----IPPSIYNISSFEFIFLQSNRFHGSLPFDMVANLPNLRKFVAAKNNLTGFLPIS 138 (869)
Q Consensus 64 ~~~~~l~~L~~L~L~~n-~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~ 138 (869)
..+...++|++|+|++| .|... +...+...++|++|+|++|.+...-. . .+...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~-~--------------------~l~~~ 88 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVA-F--------------------ALAEM 88 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHH-H--------------------HHHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHH-H--------------------HHHHH
Confidence 44556677777777777 66532 23344555666667766666641100 0 12233
Q ss_pred ccCCCCCcEEEccCCcccccc----CcCccCCCCCCEEEc--cCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 139 LSNASNLELLELRDNQFIGKM----SINFNSLKNLSVLIL--GNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 139 l~~l~~L~~L~L~~N~i~~~~----~~~~~~l~~L~~L~l--~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
+...++|++|+|++|.|.... ...+...++|++|+| ++|.|+..... .+...+...++|++|+|++|.+.
T Consensus 89 L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~--~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 89 LKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM--EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH--HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH--HHHHHHHhCCCcCEEeccCCCCC
Confidence 444556666666666665321 233444455555555 55555443321 23334445555555555555553
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=1e-07 Score=96.42 Aligned_cols=96 Identities=18% Similarity=0.223 Sum_probs=73.8
Q ss_pred cccCCCcccccCChh---hhhccCCcCEEeccCCcCcc--ccCcccccCcCCCEEEccCCccCccCCccccCCC--CCCE
Q 002897 2 FDAQNNKLVGDIPVE---IGCYLFKLENLSLAENHLTG--QLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLR--KLIY 74 (869)
Q Consensus 2 l~l~~~~~~~~ip~~---~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~--~L~~ 74 (869)
++++.|+.. .++.. +...+++|+.|+|++|+|++ .+|..+..+++|++|+|++|+|++. ..+..++ +|++
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 456667555 55542 23468899999999999997 4457788999999999999999964 3455555 9999
Q ss_pred EeCcCcccCccCCc-------ccccCCCCcEEE
Q 002897 75 LNIGRNQFSGFIPP-------SIYNISSFEFIF 100 (869)
Q Consensus 75 L~L~~n~i~~~~p~-------~~~~l~~L~~L~ 100 (869)
|+|++|.+.+..|. .+..+++|+.||
T Consensus 225 L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 225 LWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 99999999876652 366788888775
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.47 E-value=1e-06 Score=90.94 Aligned_cols=135 Identities=18% Similarity=0.099 Sum_probs=99.8
Q ss_pred eeeeecce-EEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceEEEEeecc
Q 002897 561 MVGQGSFG-TVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFKAIVYDFM 638 (869)
Q Consensus 561 ~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 638 (869)
.+..|..+ .||+......+..+++|+-... ....+.+|+.+++.+. +--+.++++++.+. +..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~-----~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP-----DDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET-----TEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC-----CeEEEEEEee
Confidence 45556655 6999888777888999986532 3456788999998884 33466778876543 6789999999
Q ss_pred cCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 002897 639 QNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHC------------------------------------ 682 (869)
Q Consensus 639 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 682 (869)
+|.++.+...... .....++.++++.++.||+..
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9998887765432 233456777778888888531
Q ss_pred -------------------CCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 683 -------------------KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 683 -------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999987777899999875
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=1.3e-06 Score=90.39 Aligned_cols=143 Identities=17% Similarity=0.115 Sum_probs=92.7
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCC---ccceEEEEeeccccCCCceEEEEe
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHR---NLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
.+.++.|.++.||+++.. +|+.++||+...........+..|++.++.+.+. .+.+++++ +..++||
T Consensus 20 ~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~---------~~~~lvm 89 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDRTLAM 89 (288)
T ss_dssp EEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETTEEEE
T ss_pred eeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEe---------cCcEEEE
Confidence 468999999999999885 7899999997543333346789999999999764 57788876 2358999
Q ss_pred ecccCCCHHH-----------HHhhCCCcc---c------------ccCCCHHHHHH--------------------HHH
Q 002897 636 DFMQNGSLEE-----------WLHQNNDKL---E------------VCNLSLIQTLN--------------------IAI 669 (869)
Q Consensus 636 e~~~~gsL~~-----------~l~~~~~~~---~------------~~~l~~~~~~~--------------------i~~ 669 (869)
||++++++.. .++...... . ...-+|..... ...
T Consensus 90 e~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~ 169 (288)
T 3d1u_A 90 EWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVR 169 (288)
T ss_dssp ECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHH
T ss_pred EecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 9999987421 123321110 0 00013332210 011
Q ss_pred HHHHHHHHHH----hcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 670 DVASAIEYLH----HHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 670 ~i~~~L~~LH----~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.+-+.++.+. ....+.++|+|+.+.||+++. +.+.++|| .+.
T Consensus 170 ~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 170 LVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 1112222232 223568999999999999988 45889999 654
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=2.5e-06 Score=89.55 Aligned_cols=136 Identities=18% Similarity=0.144 Sum_probs=95.0
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCC---ccceEEEEeeccccCCCceEEEEe
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHR---NLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
.+.++.|....||+. |..+++|+... ......+.+|+++++.+.+. .+.+++.+... ..+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----SDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC----TTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc----CCCceEEEE
Confidence 356888888899987 46688888532 23456789999999999642 35566666532 235568999
Q ss_pred ecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------
Q 002897 636 DFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHH---------------------------------- 681 (869)
Q Consensus 636 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~---------------------------------- 681 (869)
||++|.++.+.... .++..+...++.++++.|+.||+.
T Consensus 93 e~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 93 RKVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp ECCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 99999888763221 144555556666666666666643
Q ss_pred -----------------------CCCCeEecCCCCCceeecC---CCc-EEEccccccc
Q 002897 682 -----------------------CKPPVVHGDLKPSNVLLDH---DMV-AHVGDFGLAK 713 (869)
Q Consensus 682 -----------------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~Dfg~a~ 713 (869)
..+.++|+|++|.||+++. ++. +.|+||+.+.
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 1235799999999999987 455 4899999875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.19 E-value=5.9e-06 Score=88.69 Aligned_cols=76 Identities=12% Similarity=0.103 Sum_probs=56.1
Q ss_pred CCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCc--cceEEEEeeccccCCCceEEEEe
Q 002897 558 SSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRN--LIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 558 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
..+.++.|....+|++.. +|+.+++|+.... ..+..|+.+++.+.... +.++++++... ....++||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~----~g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFS----ESLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESS----SSCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCC----CCCeEEEE
Confidence 456789999999999986 6889999987432 35888999999886433 45677665432 14678999
Q ss_pred ecccCCCHH
Q 002897 636 DFMQNGSLE 644 (869)
Q Consensus 636 e~~~~gsL~ 644 (869)
||++|.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.03 E-value=8.9e-06 Score=87.54 Aligned_cols=83 Identities=10% Similarity=0.005 Sum_probs=55.0
Q ss_pred Cee-eeecceEEEEEEEC--C----CCeEEEEEEeeccc---chhhHHHHHHHHHHHhCC-C--CccceEEEEeeccccC
Q 002897 560 NMV-GQGSFGTVFKGIIG--E----NGMLVAVKVLNLMQ---KGALKSFLTECEALRSIR-H--RNLIKIITICSSIDFN 626 (869)
Q Consensus 560 ~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~ 626 (869)
+.| +.|....+|++... . +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 567 78888999998762 0 16789999875432 101245788999888883 3 357778887644311
Q ss_pred CCceEEEEeecccCCCHH
Q 002897 627 GVDFKAIVYDFMQNGSLE 644 (869)
Q Consensus 627 ~~~~~~lv~e~~~~gsL~ 644 (869)
....++||||++|.++.
T Consensus 105 -~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 -LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp -TSSCEEEEECCCCBCCC
T ss_pred -cCCceEEEEecCCCChh
Confidence 13467999999886654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.92 E-value=2e-05 Score=86.07 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=49.3
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccc-------hhhHHHHHHHHHHHhCCC--C-ccceEEEEeeccccCCC
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQK-------GALKSFLTECEALRSIRH--R-NLIKIITICSSIDFNGV 628 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 628 (869)
.+.+|.|.++.||++....+++.++||....... ....++..|+++++.+.. + .+.+++.+..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~------- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT------- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET-------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC-------
Confidence 4578999999999997655678999998643211 123566889999888732 3 3445655421
Q ss_pred ceEEEEeecccCC
Q 002897 629 DFKAIVYDFMQNG 641 (869)
Q Consensus 629 ~~~~lv~e~~~~g 641 (869)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 3357999999764
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.89 E-value=4.3e-05 Score=79.30 Aligned_cols=78 Identities=13% Similarity=0.135 Sum_probs=57.0
Q ss_pred CCCCCCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC-C--CccceEEEEeeccccCCCceE
Q 002897 555 EFSSSNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR-H--RNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 555 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~~~ 631 (869)
+...++.+|.|..+.||+++.. +|+.|++|+...........+..|++.|+.+. . --+.+++++ +..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~---------~~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW---------DDR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE---------ETT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec---------cCc
Confidence 3444578999999999999985 89999999875444433456789999998884 2 235566665 234
Q ss_pred EEEeecccCCC
Q 002897 632 AIVYDFMQNGS 642 (869)
Q Consensus 632 ~lv~e~~~~gs 642 (869)
++||||++++.
T Consensus 86 ~lv~e~l~~~~ 96 (288)
T 3f7w_A 86 TLAMEWVDERP 96 (288)
T ss_dssp EEEEECCCCCC
T ss_pred eEEEEeecccC
Confidence 78999998764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.76 E-value=6.1e-06 Score=77.09 Aligned_cols=34 Identities=12% Similarity=-0.023 Sum_probs=14.6
Q ss_pred CCCEEeCcCcccCccCCcccccCCCCcEEECcCC
Q 002897 71 KLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSN 104 (869)
Q Consensus 71 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N 104 (869)
+|+.|||++|.|+..--..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3444444444444322233344444444444444
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.75 E-value=6.1e-06 Score=77.05 Aligned_cols=84 Identities=15% Similarity=0.110 Sum_probs=61.4
Q ss_pred ccccccccccccccccCCccccCCCCCcEEEeeCcc-ccCCCCcccccc----ccccEEEccCCc-ccCCCccccccccc
Q 002897 367 KNLVQLDISGNRFSGDIPGTLSACTSLEYVKMQDNS-FSGSIPPSLNFL----KSIKVLDLSSNK-LSGQIPKYLENLSF 440 (869)
Q Consensus 367 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 440 (869)
.+|+.|||+++.+++.--..+.+|++|+.|+|++|. +++..-..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888888876656667888899999999885 654333345443 368899998874 76443456777888
Q ss_pred cCeecccccc
Q 002897 441 LEYLNLSYNH 450 (869)
Q Consensus 441 L~~l~l~~N~ 450 (869)
|++|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999988875
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.67 E-value=0.00022 Score=74.17 Aligned_cols=141 Identities=18% Similarity=0.155 Sum_probs=90.7
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC---CCccceEEEEeeccccCCCceEEEEe
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR---HRNLIKIITICSSIDFNGVDFKAIVY 635 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 635 (869)
.+.++.|....+|+... +++.+++|+.... ....+..|++.++.+. ...+.++++++... +..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~-----g~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ-----GHSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS-----SEEEEEE
T ss_pred eEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC-----CceEEEE
Confidence 35789999999999986 5778889987542 3467889999988883 35678888875432 5689999
Q ss_pred ecccCCCHH-----------HHHhhCCC--ccc--------------ccCCCHHHHH---HHHH----------------
Q 002897 636 DFMQNGSLE-----------EWLHQNND--KLE--------------VCNLSLIQTL---NIAI---------------- 669 (869)
Q Consensus 636 e~~~~gsL~-----------~~l~~~~~--~~~--------------~~~l~~~~~~---~i~~---------------- 669 (869)
||+++..+. ..++.... ... ...-+|.... ++..
T Consensus 111 e~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~ 190 (312)
T 3jr1_A 111 EALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNID 190 (312)
T ss_dssp ECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHH
T ss_pred EeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHH
Confidence 999987642 12333221 000 0012454322 1111
Q ss_pred HHHHH-HHHHHh-cCCCCeEecCCCCCceeecCCCcEEEcccc
Q 002897 670 DVASA-IEYLHH-HCKPPVVHGDLKPSNVLLDHDMVAHVGDFG 710 (869)
Q Consensus 670 ~i~~~-L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 710 (869)
.+++. ...|.. ...+.++|+|+.+.|++++.++ +.|+|++
T Consensus 191 ~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 191 LIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 123321 2256899999999999999887 8899984
No 429
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.61 E-value=0.00036 Score=74.33 Aligned_cols=148 Identities=17% Similarity=0.096 Sum_probs=79.4
Q ss_pred CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC--CCccceEEEEeeccc-cCCCceEEEEee
Q 002897 560 NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR--HRNLIKIITICSSID-FNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~-~~~~~~~~lv~e 636 (869)
+.++.|..+.||++... +..+++|+.... ......|+.+++.+. .-.+.+++....... ....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34666778999999873 445899998642 133445666665552 112333333110000 011356789999
Q ss_pred cccCCCHH--------------HHHhhCCCcc----c----ccCCCHHH-------------------------------
Q 002897 637 FMQNGSLE--------------EWLHQNNDKL----E----VCNLSLIQ------------------------------- 663 (869)
Q Consensus 637 ~~~~gsL~--------------~~l~~~~~~~----~----~~~l~~~~------------------------------- 663 (869)
|++|.++. ..++...... . ...-.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1122111000 0 00012211
Q ss_pred HHHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 664 TLNIAIDVASAIEYLHH----------HCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 664 ~~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
...+..++..++++|++ ...+.++|+|+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11112234456667763 124589999999999999888899999999875
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.52 E-value=1.2e-05 Score=76.51 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=38.9
Q ss_pred ccccCCCCCcEEEccCCccccccCcCc----cCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCC
Q 002897 137 ISLSNASNLELLELRDNQFIGKMSINF----NSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDN 207 (869)
Q Consensus 137 ~~l~~l~~L~~L~L~~N~i~~~~~~~~----~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n 207 (869)
.++...+.|+.|+|++|+|.......+ ..-+.|++|+|++|.|+..+.. .+..++...+.|++|+|++|
T Consensus 64 ~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~--ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 64 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA--RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH--HHHHHTTTTCCCSEEECCCC
T ss_pred HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH--HHHHHHhhCCceeEEECCCC
Confidence 455555666666666666654333332 2345666666666666554432 34445666666666666654
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.48 E-value=1.6e-05 Score=75.70 Aligned_cols=78 Identities=12% Similarity=0.158 Sum_probs=51.6
Q ss_pred cccccCCCCCcEEEccCC-ccccc----cCcCccCCCCCCEEEccCccCCCCCCCCcchhhhccCCCCCcEEEccCCCCC
Q 002897 136 PISLSNASNLELLELRDN-QFIGK----MSINFNSLKNLSVLILGNNHLGNRAANDLDFVTVLANCSKLENLGLYDNQFG 210 (869)
Q Consensus 136 ~~~l~~l~~L~~L~L~~N-~i~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~ 210 (869)
...+.+.+.|+.|+|++| +|... +...+..-+.|+.|+|++|.|++.... .++.++...+.|++|+|++|+|+
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~--alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEAR--GLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHT--THHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHH--HHHHHHhcCCccCeEecCCCcCC
Confidence 345566678888888875 66432 233455667788888888888766544 45566677777788888877777
Q ss_pred CCCCh
Q 002897 211 GLLPH 215 (869)
Q Consensus 211 ~~~~~ 215 (869)
.....
T Consensus 112 ~~Ga~ 116 (197)
T 1pgv_A 112 PELLA 116 (197)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54333
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.36 E-value=0.00052 Score=75.34 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=47.1
Q ss_pred CCCeEecCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccC--cccccCCcccCCC---CCCccccch
Q 002897 683 KPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKG--TVGYIAPEYGTGS---EASMTGDVY 757 (869)
Q Consensus 683 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvw 757 (869)
.+.++|||++|.||+++.++ ++++||+.+..-+.... .....+ ...|++|+..... ......++.
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D---------la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD---------IGAYLGNLILAFFAQDGHATQENDRKEYKQWIL 300 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH---------HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH---------HHHHHHHHHHHHHhcccccccccchHHHHHHHH
Confidence 34899999999999998876 99999998864321100 000000 1346666654311 112234556
Q ss_pred hhhHHHHHHHcCC
Q 002897 758 SFGILLLEMFSRR 770 (869)
Q Consensus 758 slG~il~el~tg~ 770 (869)
+....+|+.++++
T Consensus 301 ~~~~~~~~~y~~~ 313 (420)
T 2pyw_A 301 RTIEQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777888777653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.15 E-value=0.00032 Score=62.41 Aligned_cols=57 Identities=23% Similarity=0.310 Sum_probs=42.0
Q ss_pred CEEeccCCcCc-cccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcCcccC
Q 002897 25 ENLSLAENHLT-GQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGRNQFS 83 (869)
Q Consensus 25 ~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~i~ 83 (869)
..++.++++++ ..+|..+. .+|++|+|++|+|+.+.++.|..+++|++|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46777888876 34554332 36888888888888777777888888888888888765
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.11 E-value=0.0014 Score=68.20 Aligned_cols=71 Identities=10% Similarity=0.080 Sum_probs=44.6
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCcc-ceEEEEeeccccCCCceEEEEeec
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNL-IKIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
.+.|+.|....+|++ +.+++|+....... ......|+.+++.+....+ .+++++.. +..++++||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~-------~~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP-------ATGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT-------TTCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC-------CCCEEEEee
Confidence 678999999999998 45889987543221 1223568888877732222 45665522 224689999
Q ss_pred c-cCCCH
Q 002897 638 M-QNGSL 643 (869)
Q Consensus 638 ~-~~gsL 643 (869)
+ ++.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 65444
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.08 E-value=0.0043 Score=65.17 Aligned_cols=168 Identities=14% Similarity=0.121 Sum_probs=89.4
Q ss_pred CcccHHHHHHHhcCCCCC-----CeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCc--cc
Q 002897 542 PMISYAKLSKATSEFSSS-----NMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRN--LI 614 (869)
Q Consensus 542 ~~~~~~~~~~~~~~y~~~-----~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 614 (869)
+.++.+++.....+|... +.++.|....+|++... +| .+++|+.... .....+..|+.+++.+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCC
Confidence 345666677666677653 34566888899999874 34 6889988642 12234567888777763212 23
Q ss_pred eEEEEeeccc-cCCCceEEEEeecccCCCHH-----H---------HHhhCCCccccc---CC---CHHHHHH-------
Q 002897 615 KIITICSSID-FNGVDFKAIVYDFMQNGSLE-----E---------WLHQNNDKLEVC---NL---SLIQTLN------- 666 (869)
Q Consensus 615 ~~~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~---------~l~~~~~~~~~~---~l---~~~~~~~------- 666 (869)
+++....... ....+..+++|+|++|..+. . .++......... .. .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 3332110000 00124568999999886431 0 122111000000 01 1211100
Q ss_pred -----HHHHHHHHHHHHHhc----CCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 667 -----IAIDVASAIEYLHHH----CKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 667 -----i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
+...+.+.++++++. ...+++|+|+++.||+++.++.+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666532 13479999999999999887666899999875
No 436
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.01 E-value=0.0018 Score=61.81 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=70.0
Q ss_pred CCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccccCCCCC
Q 002897 640 NGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAKFLPARP 719 (869)
Q Consensus 640 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 719 (869)
..+|.+.+..... +++++++|.++.|.+.+|.-.-.+. .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 32 ~vSL~eIL~~~~~-----PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------ 97 (229)
T 2yle_A 32 ALSLEEILRLYNQ-----PINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------ 97 (229)
T ss_dssp EEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------
T ss_pred cccHHHHHHHcCC-----CcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------
Confidence 3489999988765 5999999999999999988763211 111233457899999999988764 2211
Q ss_pred CCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCC
Q 002897 720 LDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPT 773 (869)
Q Consensus 720 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf 773 (869)
.....+.|||... ...+.+.=|||+|+++|..+--..|-
T Consensus 98 --------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 --------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -----------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred --------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0133466888764 34567888999999999999865553
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.99 E-value=0.0017 Score=71.41 Aligned_cols=75 Identities=12% Similarity=0.087 Sum_probs=48.3
Q ss_pred CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCcc-ceEEEEeeccccCCCceEEEEeec
Q 002897 559 SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRNL-IKIITICSSIDFNGVDFKAIVYDF 637 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 637 (869)
.+.|+.|-...+|++.....++.+++|+........ -...+|..+++.+...++ .++++++. + ..||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~-------~--G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT-------N--GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET-------T--EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC-------C--eEEEEe
Confidence 357888889999999985435889999874332211 123689999998864444 46666642 1 259999
Q ss_pred ccCCCH
Q 002897 638 MQNGSL 643 (869)
Q Consensus 638 ~~~gsL 643 (869)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987544
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.98 E-value=0.0047 Score=65.11 Aligned_cols=166 Identities=15% Similarity=0.114 Sum_probs=89.6
Q ss_pred CCcccHHHHHHHhcCCCC-----CCeeeeecceEEEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCCCC--cc
Q 002897 541 FPMISYAKLSKATSEFSS-----SNMVGQGSFGTVFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIRHR--NL 613 (869)
Q Consensus 541 ~~~~~~~~~~~~~~~y~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 613 (869)
++.++.+.+......|.+ ...++ |....||++... +|+.+++|+..... .....+..|..+++.+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCee
Confidence 344555666655555533 23466 888899988764 57789999986321 1235667788888777321 23
Q ss_pred ceEEEEeeccc--cCCCceEEEEeecccCCCHH-----HH---------HhhCC---CcccccCCCHHHH----HH----
Q 002897 614 IKIITICSSID--FNGVDFKAIVYDFMQNGSLE-----EW---------LHQNN---DKLEVCNLSLIQT----LN---- 666 (869)
Q Consensus 614 v~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~-----~~---------l~~~~---~~~~~~~l~~~~~----~~---- 666 (869)
.+++.. +.. ....+..+++|+|++|.++. .+ ++... ........++... ..
T Consensus 85 p~~~~~--~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 162 (328)
T 1zyl_A 85 AAPVAF--NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFED 162 (328)
T ss_dssp CCCCCB--TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHT
T ss_pred cceeec--CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhh
Confidence 444432 110 01124567899999875431 11 11110 0000001222111 00
Q ss_pred -----------HHHHHHHHHHHHHhc----CCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 667 -----------IAIDVASAIEYLHHH----CKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 667 -----------i~~~i~~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
+...+...++.+.+. ..+.++|||+++.||+++ + .+.++||+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 163 ATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 111111223333221 234689999999999998 4 89999999875
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.96 E-value=0.0059 Score=64.47 Aligned_cols=144 Identities=11% Similarity=0.033 Sum_probs=73.9
Q ss_pred CeeeeecceE-EEEEEECCCCeEEEEEEeecccchhhHHHHHHHHHHHhCC--CCccceEEEEeeccccCCCceEEEEee
Q 002897 560 NMVGQGSFGT-VFKGIIGENGMLVAVKVLNLMQKGALKSFLTECEALRSIR--HRNLIKIITICSSIDFNGVDFKAIVYD 636 (869)
Q Consensus 560 ~~lg~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e 636 (869)
+.++.|.... +|+.... +|+.+++|....... ..+..|+.+++.+. .-.+.+++.+... . .+++||
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~------~-g~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA------R-GLLLIE 92 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT------T-TEEEEC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC------C-CEEEEe
Confidence 4566665554 6677642 367788886543221 23455677777663 2235566665321 1 268999
Q ss_pred cccCCCHHHHHhhCCCc--------------------ccccCCCHHHHH-------H-------------HHHHHHHHHH
Q 002897 637 FMQNGSLEEWLHQNNDK--------------------LEVCNLSLIQTL-------N-------------IAIDVASAIE 676 (869)
Q Consensus 637 ~~~~gsL~~~l~~~~~~--------------------~~~~~l~~~~~~-------~-------------i~~~i~~~L~ 676 (869)
++.+.++.+++...... .....++..... . ....+...++
T Consensus 93 ~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 172 (333)
T 3csv_A 93 DLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFA 172 (333)
T ss_dssp CCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99877776655432110 000011111100 0 0011112222
Q ss_pred HHHh---cCCCCeEecCCCCCceeecCC----CcEEEcccccccc
Q 002897 677 YLHH---HCKPPVVHGDLKPSNVLLDHD----MVAHVGDFGLAKF 714 (869)
Q Consensus 677 ~LH~---~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~ 714 (869)
.+.+ ...+.++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 173 ~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 173 QILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 2211 123479999999999999875 6899999998863
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.96 E-value=0.0025 Score=68.16 Aligned_cols=145 Identities=11% Similarity=0.122 Sum_probs=83.5
Q ss_pred CCeeeeecceEEEEEEECC-------CCeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCce
Q 002897 559 SNMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDF 630 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 630 (869)
.+.+..|-...+|++.... +++.+++|+..... .......+|.++++.+. +.-..++++++. +
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~-------~- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFP-------E- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET-------T-
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcC-------C-
Confidence 3567778889999998742 35789999863322 22355668999998884 333356666642 1
Q ss_pred EEEEeecccCCCHHH--------------H---HhhCCCcccccCC-CHHHHHHHHHHHHH-------------------
Q 002897 631 KAIVYDFMQNGSLEE--------------W---LHQNNDKLEVCNL-SLIQTLNIAIDVAS------------------- 673 (869)
Q Consensus 631 ~~lv~e~~~~gsL~~--------------~---l~~~~~~~~~~~l-~~~~~~~i~~~i~~------------------- 673 (869)
.+||||++|.++.. . ++.........+. -+.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 28999998865431 0 1111110001111 23455555544422
Q ss_pred HHHHHHh----c-CCCCeEecCCCCCceeecCC----CcEEEccccccc
Q 002897 674 AIEYLHH----H-CKPPVVHGDLKPSNVLLDHD----MVAHVGDFGLAK 713 (869)
Q Consensus 674 ~L~~LH~----~-~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~ 713 (869)
.++.|.+ . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2333322 1 13468999999999999876 789999999885
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.88 E-value=0.0019 Score=57.39 Aligned_cols=57 Identities=14% Similarity=0.255 Sum_probs=47.6
Q ss_pred CEEEccCCccC-ccCCccccCCCCCCEEeCcCcccCccCCcccccCCCCcEEECcCCcCc
Q 002897 49 QVIDIRGNRLG-GKIPDTLGQLRKLIYLNIGRNQFSGFIPPSIYNISSFEFIFLQSNRFH 107 (869)
Q Consensus 49 ~~L~L~~n~i~-~~~p~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 107 (869)
..++.+++.++ ..+|..+. .+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 47899999987 35565443 47999999999999888888999999999999999886
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55 E-value=0.0035 Score=67.38 Aligned_cols=73 Identities=10% Similarity=0.130 Sum_probs=43.9
Q ss_pred CeeeeecceEEEEEEECC--------CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCc-cceEEEEeeccccCCCce
Q 002897 560 NMVGQGSFGTVFKGIIGE--------NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRN-LIKIITICSSIDFNGVDF 630 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 630 (869)
+.++.|....+|++.... .++.+++|+....... ......|.++++.+...+ +.++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~---------~ 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF---------N 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec---------C
Confidence 467788889999998742 1368899987543221 123467888888874323 44666542 1
Q ss_pred EEEEeecccCCC
Q 002897 631 KAIVYDFMQNGS 642 (869)
Q Consensus 631 ~~lv~e~~~~gs 642 (869)
.++||||++|.+
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 268999998754
No 443
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.52 E-value=0.011 Score=64.73 Aligned_cols=74 Identities=15% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCeeeeecceEEEEEEECC-------CCeEEEEEEeecccchhhHHHHHHHHHHHhCCCCc-cceEEEEeeccccCCCce
Q 002897 559 SNMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQKGALKSFLTECEALRSIRHRN-LIKIITICSSIDFNGVDF 630 (869)
Q Consensus 559 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 630 (869)
.+.|+.|....||++.... +++.+++|+..... ....+..|+.+++.+...+ ..++++.+. +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~-------~- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS-------G- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET-------T-
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC-------C-
Confidence 3568888889999998752 25789999884321 1144557999988884333 356666532 1
Q ss_pred EEEEeecccCCCH
Q 002897 631 KAIVYDFMQNGSL 643 (869)
Q Consensus 631 ~~lv~e~~~~gsL 643 (869)
.+|+||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 289999986443
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.29 E-value=0.013 Score=61.78 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=27.6
Q ss_pred CCeEecCCCCCceeecCCCcEEEcccccccc
Q 002897 684 PPVVHGDLKPSNVLLDHDMVAHVGDFGLAKF 714 (869)
Q Consensus 684 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 714 (869)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987753
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.14 E-value=0.086 Score=56.42 Aligned_cols=145 Identities=13% Similarity=0.131 Sum_probs=82.4
Q ss_pred CeeeeecceEEEEEEECC-------CCeEEEEEEeecccch---------h---------hHHHHHHHHHHHhCC-CCcc
Q 002897 560 NMVGQGSFGTVFKGIIGE-------NGMLVAVKVLNLMQKG---------A---------LKSFLTECEALRSIR-HRNL 613 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~---------~---------~~~~~~E~~~l~~l~-h~ni 613 (869)
+.|..|-...+|++.... .++.|.+++.-...+. . .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 467778888999988752 1478889987432211 0 112235888888884 4445
Q ss_pred ceEEEEeeccccCCCceEEEEeecccCCCHHH-------H----------HhhCCCcccccCC-CHHHHHHHHHHHH---
Q 002897 614 IKIITICSSIDFNGVDFKAIVYDFMQNGSLEE-------W----------LHQNNDKLEVCNL-SLIQTLNIAIDVA--- 672 (869)
Q Consensus 614 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-------~----------l~~~~~~~~~~~l-~~~~~~~i~~~i~--- 672 (869)
.++++++. + .+|+||++|-+|.. . ++.........+. -+..+.++..++.
T Consensus 138 Pkl~~~~~-------~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~ 208 (401)
T 3f2s_A 138 PKLYGIFP-------Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIK 208 (401)
T ss_dssp CCEEEEET-------T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeC-------C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhcc
Confidence 66777632 1 28999998754421 0 1111111011111 1233444433321
Q ss_pred -------------------HHHH----HHHhc-CCCCeEecCCCCCceeecCC------CcEEEccccccc
Q 002897 673 -------------------SAIE----YLHHH-CKPPVVHGDLKPSNVLLDHD------MVAHVGDFGLAK 713 (869)
Q Consensus 673 -------------------~~L~----~LH~~-~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfg~a~ 713 (869)
..+. ++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 209 FTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred CcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22222 23468999999999999887 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.99 E-value=0.026 Score=61.13 Aligned_cols=74 Identities=12% Similarity=0.102 Sum_probs=48.1
Q ss_pred CeeeeecceEEEEEEECCC-------CeEEEEEEeecccchhhHHHHHHHHHHHhCC-CCccceEEEEeeccccCCCceE
Q 002897 560 NMVGQGSFGTVFKGIIGEN-------GMLVAVKVLNLMQKGALKSFLTECEALRSIR-HRNLIKIITICSSIDFNGVDFK 631 (869)
Q Consensus 560 ~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 631 (869)
+.+..|-...+|++..... ++.+++|+...... ..-...+|..+++.+. +.-..++++.+. -
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~---------~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP---------E 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------T
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------C
Confidence 4677788889999987521 67899998744322 2223467888888874 333455665421 2
Q ss_pred EEEeecccCCCH
Q 002897 632 AIVYDFMQNGSL 643 (869)
Q Consensus 632 ~lv~e~~~~gsL 643 (869)
+.||||++|.++
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 689999998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.75 E-value=0.25 Score=53.31 Aligned_cols=28 Identities=25% Similarity=0.377 Sum_probs=24.3
Q ss_pred eEecCCCCCceee------cCCCcEEEccccccc
Q 002897 686 VVHGDLKPSNVLL------DHDMVAHVGDFGLAK 713 (869)
Q Consensus 686 ivH~Dlkp~NIll------~~~~~~kl~Dfg~a~ 713 (869)
++|+|+.+.||++ +++..++++||..|.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 5799999999999 456689999999885
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=78.74 E-value=1.8 Score=29.14 Aligned_cols=16 Identities=19% Similarity=0.216 Sum_probs=7.8
Q ss_pred HHHHHhheeeecccCC
Q 002897 513 LSACFIVIYGRRRSTD 528 (869)
Q Consensus 513 ~~~~~~~~~~~~r~~~ 528 (869)
++++.+++|.|||+.+
T Consensus 26 i~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 26 VLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHCSC
T ss_pred HHHHHHHhheehhhhh
Confidence 3334445555555544
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.41 E-value=3.6 Score=39.34 Aligned_cols=103 Identities=13% Similarity=0.075 Sum_probs=69.3
Q ss_pred ceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCCceeecCCCcEEEc
Q 002897 629 DFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIE-YLHHHCKPPVVHGDLKPSNVLLDHDMVAHVG 707 (869)
Q Consensus 629 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 707 (869)
+...+.++.-+++.=...++. ++...+++++.+|+.... +++ .-+|--++|+|++++.++.+++.
T Consensus 61 D~~~i~y~~~~~~~~f~~i~~---------~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~ 126 (219)
T 4ano_A 61 DEVKVVIKPPSSFLTFAAIRK---------TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFL 126 (219)
T ss_dssp SEEEEEEECCTTCEEHHHHHT---------SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEES
T ss_pred CEEEEEEEcCcccCcHHHHHh---------cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEE
Confidence 556666665434333334432 778899999999988776 554 35788899999999999999999
Q ss_pred cccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHcCCCCCCc
Q 002897 708 DFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFSRRRPTDS 775 (869)
Q Consensus 708 Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~tg~~pf~~ 775 (869)
-.|.-..+ +|.- .++.-=.-.+=|++..++.++..|+.
T Consensus 127 hRGi~~~l-------------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 127 HVGVKESL-------------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CCEETTTB-------------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EcCCcccC-------------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 88875432 2221 11111123566788888988888753
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=75.35 E-value=2.4 Score=28.61 Aligned_cols=13 Identities=31% Similarity=0.227 Sum_probs=6.1
Q ss_pred HHhheeeecccCC
Q 002897 516 CFIVIYGRRRSTD 528 (869)
Q Consensus 516 ~~~~~~~~~r~~~ 528 (869)
+.+++|.+||+.+
T Consensus 29 ~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 29 LGIGLFMRRRHIV 41 (44)
T ss_dssp HHHHHHHHTTTCC
T ss_pred HHHHHHhhhhHhh
Confidence 3344555555443
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.33 E-value=4.2 Score=38.70 Aligned_cols=119 Identities=15% Similarity=0.183 Sum_probs=77.1
Q ss_pred CCCccceEEEEeeccccCCCceEEEEeecccCCCHHHHHhhCCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 002897 609 RHRNLIKIITICSSIDFNGVDFKAIVYDFMQNGSLEEWLHQNNDKLEVCNLSLIQTLNIAIDVASAIEYLHHHCKPPVVH 688 (869)
Q Consensus 609 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 688 (869)
.||+.+.. .+.. ..+...+.++.-+.+.=...++ ..+...+++++.+|+....+++. =+|
T Consensus 43 ~~~~Fl~~-~I~e-----~eD~v~~~y~~~~~~~~f~~ik---------~~~~~eKlr~l~ni~~l~~~~~~-----r~t 102 (215)
T 4ann_A 43 HSPYFIDA-ELTE-----LRDSFQIHYDINDNHTPFDNIK---------SFTKNEKLRYLLNIKNLEEVNRT-----RYT 102 (215)
T ss_dssp CCTTBCCE-EEEE-----CSSEEEEEECCCTTSEEGGGGG---------GSCHHHHHHHHHHGGGGGGGGGS-----SEE
T ss_pred cCCcccce-EEEE-----cccEEEEEEEcCcccCCHHHHH---------hcCHHHHHHHHHHHHHHHHHhcC-----ceE
Confidence 68888765 2322 2245555555433221122232 27888999999999998865553 478
Q ss_pred cCCCCCceeecCCCcEEEccccccccCCCCCCCCccccCCCCCCccCcccccCCcccCCCCCCccccchhhhHHHHHHHc
Q 002897 689 GDLKPSNVLLDHDMVAHVGDFGLAKFLPARPLDTVVETPSSSSGIKGTVGYIAPEYGTGSEASMTGDVYSFGILLLEMFS 768 (869)
Q Consensus 689 ~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~il~el~t 768 (869)
--++|+|++++.++.+++.-.|+...++ |. ..++..=.-.+=|++..+++
T Consensus 103 f~L~P~NL~f~~~~~p~i~~RGik~~l~-------------------------P~-----~~~ee~fL~qyKAliiall~ 152 (215)
T 4ann_A 103 FVLAPDELFFTRDGLPIAKTRGLQNVVD-------------------------PL-----PVSEAEFLTRYKALVICAFN 152 (215)
T ss_dssp CCCSGGGEEECTTSCEEESCCEETTTBS-------------------------CC-----CCCHHHHHHHHHHHHHHHHC
T ss_pred EEEecceEEEcCCCCEEEEEccCccCCC-------------------------CC-----CCCHHHHHHHHHHHHHHHHc
Confidence 8899999999999999999888754322 21 11112223356788999999
Q ss_pred CCCCCCcCc
Q 002897 769 RRRPTDSMF 777 (869)
Q Consensus 769 g~~pf~~~~ 777 (869)
++..|+...
T Consensus 153 ~K~~Fe~l~ 161 (215)
T 4ann_A 153 EKQSFDALV 161 (215)
T ss_dssp TTCCHHHHH
T ss_pred CCCCHHHHH
Confidence 999986533
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.05 E-value=0.42 Score=52.40 Aligned_cols=62 Identities=15% Similarity=0.045 Sum_probs=18.3
Q ss_pred CCCCeeeeecceEEEEEEECCCCeEEEE------EEeecc--cchhhHHHHHHHHHHHhCCCCccceEEEEee
Q 002897 557 SSSNMVGQGSFGTVFKGIIGENGMLVAV------KVLNLM--QKGALKSFLTECEALRSIRHRNLIKIITICS 621 (869)
Q Consensus 557 ~~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 621 (869)
.+.+.+| ||.||++.+.....+||| |..+.. ..+....+.+|+.+++..+|||+++..++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4556776 999999999655568888 665432 2333456788999999999999999887654
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=62.03 E-value=15 Score=30.18 Aligned_cols=46 Identities=13% Similarity=0.101 Sum_probs=27.4
Q ss_pred cCccccCcccccCcCCCEEEccCCccCccCCccccCCCCCCEEeCcC
Q 002897 33 HLTGQLPVSIGNLSALQVIDIRGNRLGGKIPDTLGQLRKLIYLNIGR 79 (869)
Q Consensus 33 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~ 79 (869)
.++.+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 445455566666666666666654 2335556666666666666654
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=58.79 E-value=8.8 Score=25.88 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=6.0
Q ss_pred HHhheeeecccCC
Q 002897 516 CFIVIYGRRRSTD 528 (869)
Q Consensus 516 ~~~~~~~~~r~~~ 528 (869)
+.+++|+|||+.+
T Consensus 28 ~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 28 LTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHTTCSS
T ss_pred HHHHHHhhhhhhh
Confidence 3344555554443
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.71 E-value=19 Score=29.51 Aligned_cols=51 Identities=10% Similarity=0.105 Sum_probs=43.8
Q ss_pred CCCcccccCChhhhhccCCcCEEeccCCcCccccCcccccCcCCCEEEccCCc
Q 002897 5 QNNKLVGDIPVEIGCYLFKLENLSLAENHLTGQLPVSIGNLSALQVIDIRGNR 57 (869)
Q Consensus 5 ~~~~~~~~ip~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 57 (869)
++..++ +|....|...++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.+..
T Consensus 4 ~g~~vt-~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 4 EGEPVV-GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCC-SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCCccC-EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 456778 899999999999999999876 555778899999999999998754
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=40.32 E-value=19 Score=23.78 Aligned_cols=9 Identities=11% Similarity=0.069 Sum_probs=3.3
Q ss_pred hHHHHHHHH
Q 002897 503 VIPTIVSCL 511 (869)
Q Consensus 503 ~i~~~~~~~ 511 (869)
++.++++++
T Consensus 16 ~~~vv~Gv~ 24 (41)
T 2k9y_A 16 IGGVAVGVV 24 (41)
T ss_dssp HHHHHHHHH
T ss_pred EeehhHHHH
Confidence 333333433
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=40.17 E-value=26 Score=22.76 Aligned_cols=13 Identities=15% Similarity=0.368 Sum_probs=5.5
Q ss_pred hhhhhHHHHHHHH
Q 002897 499 ILKVVIPTIVSCL 511 (869)
Q Consensus 499 ~~~~~i~~~~~~~ 511 (869)
+..+++.++++++
T Consensus 13 IAGiVvG~v~gv~ 25 (38)
T 2k1k_A 13 IVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHH
Confidence 3444444444433
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.08 E-value=5.7e+02 Score=28.43 Aligned_cols=47 Identities=26% Similarity=0.194 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 660 SLIQTLNIAIDVAS--AIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 660 ~~~~~~~i~~~i~~--~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.++.+..++..+|- .+.|+=.- +|=+++|||++.+|++.=+|||.+-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 35556666665543 35555433 6889999999999999999999874
No 459
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=25.54 E-value=41 Score=24.59 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=7.4
Q ss_pred hhHHHHHHHHHHHHHHhh
Q 002897 502 VVIPTIVSCLILSACFIV 519 (869)
Q Consensus 502 ~~i~~~~~~~i~~~~~~~ 519 (869)
+++..+++.++++.+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 344444443333333333
No 460
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=20.15 E-value=1.4e+02 Score=35.74 Aligned_cols=47 Identities=19% Similarity=0.130 Sum_probs=32.7
Q ss_pred CHHH-HHHHHHHHHH--HHHHHHhcCCCCeEecCCCCCceeecCCCcEEEccccccc
Q 002897 660 SLIQ-TLNIAIDVAS--AIEYLHHHCKPPVVHGDLKPSNVLLDHDMVAHVGDFGLAK 713 (869)
Q Consensus 660 ~~~~-~~~i~~~i~~--~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 713 (869)
.+.. +..++..+|- .+.|+=.- +|=+++|||++.+|++.=+|||.+-
T Consensus 912 ~~~~ar~nF~~S~A~ysvv~YiLgi-------gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 912 IYDAAIDLFTRSCAGYCVATFILGI-------GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHHHHHHhhhhhheEEEEee-------cCCCCcceEEeCCCCEEEEeehhhh
Confidence 4443 3345554442 34455433 6889999999999999999999984
Done!