Your job contains 1 sequence.
>002898
MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA
EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM
RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK
NNSVELTEEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYIVRNGKALII
NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT
EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS
TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII
LGGNPKMLAKKIIEDRLLLLLTREALNVEVDDKTSSPKVLSEIKLGSSSLALLAKAALLA
KYVGKAEGKSWTYQEAKSFFSESVEMSQSMNLKELQKLIDKQSAMYPLGPTVALTYLSVL
KDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM
FQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVL
EVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEF
IAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNFYFPDLPKPPNLFRGIRRKSSSL
KRWLAICSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVK
TLDCFWRDHLINMNRLSSAVYHNIYFSQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002898
(869 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CHY_0162 - symbol:CHY_0162 "preprotein transloca... 1193 1.2e-159 3
UNIPROTKB|P0A5Y8 - symbol:secA1 "Protein translocase subu... 1119 1.3e-151 3
TIGR_CMR|DET_0434 - symbol:DET_0434 "preprotein transloca... 790 4.5e-143 4
TIGR_CMR|GSU_2050 - symbol:GSU_2050 "preprotein transloca... 1051 1.5e-142 3
TIGR_CMR|BA_5421 - symbol:BA_5421 "preprotein translocase... 1085 3.9e-142 3
UNIPROTKB|Q7WWK0 - symbol:secA "Protein translocase subun... 1018 4.4e-135 3
TIGR_CMR|APH_1178 - symbol:APH_1178 "preprotein transloca... 1056 1.7e-133 3
TIGR_CMR|SPO_0057 - symbol:SPO_0057 "preprotein transloca... 1012 3.5e-133 3
TIGR_CMR|CJE_1020 - symbol:CJE_1020 "preprotein transloca... 989 3.5e-133 3
TIGR_CMR|NSE_0232 - symbol:NSE_0232 "preprotein transloca... 1014 5.0e-132 3
TIGR_CMR|ECH_1149 - symbol:ECH_1149 "preprotein transloca... 1035 9.9e-131 2
NCBI_NP|NP_357091.2 - symbol:secA "preprotein translocase... 990 3.1e-130 3
TIGR_CMR|CBU_0147 - symbol:CBU_0147 "preprotein transloca... 539 1.2e-129 4
TIGR_CMR|BA_0882 - symbol:BA_0882 "preprotein translocase... 1002 1.5e-125 2
UNIPROTKB|P10408 - symbol:secA species:83333 "Escherichia... 928 2.2e-123 3
TIGR_CMR|SO_4211 - symbol:SO_4211 "preprotein translocase... 893 1.1e-121 3
TIGR_CMR|CPS_4454 - symbol:CPS_4454 "preprotein transloca... 897 3.5e-121 3
UNIPROTKB|Q3S2Y3 - symbol:secA2 "Protein translocase subu... 836 1.5e-102 2
UNIPROTKB|Q7WUF6 - symbol:secA2 "Protein translocase subu... 802 8.7e-98 2
UNIPROTKB|Q5LPY3 - symbol:secA2 "Protein translocase subu... 787 1.4e-95 2
TIGR_CMR|SPO_2713 - symbol:SPO_2713 "SecA DEAD domain pro... 787 1.4e-95 2
UNIPROTKB|P66785 - symbol:secA2 "Protein translocase subu... 777 2.1e-95 3
UNIPROTKB|Q9KPH4 - symbol:secA "Protein translocase subun... 559 6.7e-81 3
TIGR_CMR|VC_2394 - symbol:VC_2394 "preprotein translocase... 559 6.7e-81 3
DICTYBASE|DDB_G0291406 - symbol:DDB_G0291406 species:4468... 237 1.8e-28 3
>TIGR_CMR|CHY_0162 [details] [associations]
symbol:CHY_0162 "preprotein translocase, SecA subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009306 "protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_359034.1 ProteinModelPortal:Q3AFQ0
SMR:Q3AFQ0 STRING:Q3AFQ0 GeneID:3727591 KEGG:chy:CHY_0162
PATRIC:21273509 BioCyc:CHYD246194:GJCN-162-MONOMER Uniprot:Q3AFQ0
Length = 874
Score = 1193 (425.0 bits), Expect = 1.2e-159, Sum P(3) = 1.2e-159
Identities = 236/430 (54%), Positives = 319/430 (74%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ++GG VLH+G IAEMKTGEGKTLV+TL AYLNALTG GVH+VTVNDYLA+RDA
Sbjct: 79 MRHFDVQLMGGIVLHEGKIAEMKTGEGKTLVATLPAYLNALTGRGVHIVTVNDYLARRDA 138
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM ++++FLGLSVGL+ GM E+++ Y DITY N+E GFDYLRDN+A + +Q+V
Sbjct: 139 EWMGKIYKFLGLSVGLVVHGMDYAEKKAAYLADITYGTNNEFGFDYLRDNMAIHPDQVVQ 198
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
R ++AI+DEVDS+LIDE R PL+ISGEA K Y AK+ + LV G YTV+ K
Sbjct: 199 R---ELYYAIIDEVDSILIDEARTPLIISGEAEKSTDLYYTFAKIVKQLVPGEDYTVDEK 255
Query: 181 NNSVELTEEGIALAEMALETNDLW-DENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 239
++V TE GI E L +L+ DE+ + ALKA+ +RD Y+V++G+ +I
Sbjct: 256 AHAVMPTEAGIHKVEKMLGIQNLYADEHMELTHHLNAALKAQALMKRDRDYVVKDGQVII 315
Query: 240 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 299
++E TGR+ RR+S+G+HQA+EAKEG+KI+ ++ +A IT+Q+ F++Y KL+GMTGTA+
Sbjct: 316 VDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEQETQTLATITFQNYFRMYEKLAGMTGTAE 375
Query: 300 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 359
TEE EF K++ + V+ +PT+ P IR DLP F T + K++ +EV + G+P+L+G
Sbjct: 376 TEENEFRKIYNLSVVVIPTHKPMIRKDLPDVIFKTEKAKFKAIVEEVARRHQTGQPILIG 435
Query: 360 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 419
+ S+E SE LS++LK++GIPH VLNA KY +EAE VAQAGR A+TI+TNMAGRGTDI
Sbjct: 436 TISIEKSEMLSEMLKKRGIPHQVLNA--KYHEKEAEIVAQAGRLGAVTIATNMAGRGTDI 493
Query: 420 ILGGNPKMLA 429
+LGGNP+ LA
Sbjct: 494 LLGGNPEFLA 503
Score = 336 (123.3 bits), Expect = 1.2e-159, Sum P(3) = 1.2e-159
Identities = 76/183 (41%), Positives = 104/183 (56%)
Query: 536 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 595
Y +L + E +V LGGLH+IGT HESRRIDNQLRGRAGRQGDPGS++F +S
Sbjct: 521 YRELLAKYKKITDEEHKKVVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFIS 580
Query: 596 LQDEMFQKFSFDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 655
L+D++ + F D L+ R+ DED PIE I R + Q E F IRK ++E
Sbjct: 581 LEDDLMRLFGSDN--IAGLMDRLGLDEDTPIEHPLITRSIETAQKRVENRNFEIRKHVLE 638
Query: 656 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 715
+D V+ QR+ +Y R+ +L G E + Q ++AVV+ + HP W L
Sbjct: 639 YDNVMNQQRELIYSQRRRVLFG--EDVLTFVHQMIEAVVERAVDTYCPDGVHPEEWDLKG 696
Query: 716 LLK 718
LL+
Sbjct: 697 LLE 699
Score = 63 (27.2 bits), Expect = 1.2e-159, Sum P(3) = 1.2e-159
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 830 MKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
++E+ER V+++ +D W DHL M++L +
Sbjct: 748 LRELERYVILRVVDEKWMDHLDAMDQLREGI 778
>UNIPROTKB|P0A5Y8 [details] [associations]
symbol:secA1 "Protein translocase subunit SecA 1"
species:1773 "Mycobacterium tuberculosis" [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0031522 "cell envelope Sec
protein transport complex" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043952 "protein transport by the Sec complex"
evidence=IDA] [GO:0051701 "interaction with host" evidence=TAS]
[GO:0052059 "evasion or tolerance by symbiont of host-produced
reactive oxygen species" evidence=TAS] [GO:0052572 "response to
host immune response" evidence=TAS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0040007 GO:GO:0005618 GO:GO:0006605 Reactome:REACT_116125
GO:GO:0005576 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0016887 EMBL:BX842582 GO:GO:0052059
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 PIR:B70592 RefSeq:NP_337866.1
RefSeq:YP_006516716.1 RefSeq:YP_177950.1 PDB:1NKT PDB:1NL3
PDBsum:1NKT PDBsum:1NL3 ProteinModelPortal:P0A5Y8 SMR:P0A5Y8
PRIDE:P0A5Y8 EnsemblBacteria:EBMYCT00000000278
EnsemblBacteria:EBMYCT00000071189 GeneID:13318062 GeneID:888860
GeneID:922590 KEGG:mtc:MT3338 KEGG:mtu:Rv3240c KEGG:mtv:RVBD_3240c
PATRIC:18129094 TubercuList:Rv3240c HOGENOM:HOG000218168
EvolutionaryTrace:P0A5Y8 GO:GO:0031522 GO:GO:0043952 Uniprot:P0A5Y8
Length = 949
Score = 1119 (399.0 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 226/436 (51%), Positives = 305/436 (69%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAE 61
R FDVQ++G A LH G++AEMKTGEGKTL L AYLNAL G GVH+VTVNDYLA+RD+E
Sbjct: 81 RPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSE 140
Query: 62 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR 121
WM RVHRFLGL VG+I M P+ERR Y DITY N+E GFDYLRDN+A + + LV R
Sbjct: 141 WMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQR 200
Query: 122 WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKN 181
H+AIVDEVDS+LIDE R PL+ISG A Y A++A L+ + +HY V+L+
Sbjct: 201 G---HHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARLAPLMEKDVHYEVDLRK 257
Query: 182 NSVELTEEGIALAEMALETNDLWDE-NDPWARFVMNALKAKEFYRRDVQYIVRNGKALII 240
+V + E+G+ E L ++L++ N P ++ NALKAKE + RD YIVR+G+ LI+
Sbjct: 258 RTVGVHEKGVEFVEDQLGIDNLYEAANSPLVSYLNNALKAKELFSRDKDYIVRDGEVLIV 317
Query: 241 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 300
+E TGRV RR++EG+HQA+EAKE ++I+A++ +A IT Q+ F+LY KL+GMTGTA+T
Sbjct: 318 DEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATITLQNYFRLYDKLAGMTGTAQT 377
Query: 301 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 360
E E +++++ V+ +PTN+P IR D + T K+ +V + G+PVL+G+
Sbjct: 378 EAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGT 437
Query: 361 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 420
TSVE SEYLS ++ IPHNVLNA KY +EA +A AGR+ +T++TNMAGRGTDI+
Sbjct: 438 TSVERSEYLSRQFTKRRIPHNVLNA--KYHEQEATIIAVAGRRGGVTVATNMAGRGTDIV 495
Query: 421 LGGNPKMLAKKIIEDR 436
LGGN L + + +R
Sbjct: 496 LGGNVDFLTDQRLRER 511
Score = 316 (116.3 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 79/211 (37%), Positives = 122/211 (57%)
Query: 537 LSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSL 596
L ++K+ S E EV GGL+V+GT HESRRIDNQLRGR+GRQGDPG +RF +SL
Sbjct: 530 LPIVKE---EASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSL 586
Query: 597 QDEMFQKFSFDTSWAVD-LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVE 655
DE+ ++F+ A++ L++R+ +D+PIE + R + Q E+ F +RK++++
Sbjct: 587 GDELMRRFN---GAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLK 643
Query: 656 FDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDK 715
+DEV+ QRK +Y R+ IL G E+ Q ++ V+ + G + W LD
Sbjct: 644 YDEVMNQQRKVIYAERRRILEG--ENLKDQALDMVRDVITAYVDGATGE-GYAEDWDLDA 700
Query: 716 LLKEFIAIAGKILDDLFAGISGDTLLKSIEE 746
L + A+ K L + GI+ D+L + E
Sbjct: 701 L---WTAL--KTLYPV--GITADSLTRKDHE 724
Score = 81 (33.6 bits), Expect = 1.3e-151, Sum P(3) = 1.3e-151
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 784 LAICSDDLTKNGRYRATTNLLRKYLGDILI--ASYLNVVQESRYDDVY----MKEVERAV 837
+ I +D LT+ +L R+ L + L+ A +E+ +++ M+++ER V
Sbjct: 711 VGITADSLTRKDHEFERDDLTREELLEALLKDAERAYAAREAELEEIAGEGAMRQLERNV 770
Query: 838 LVKTLDCFWRDHLINMNRLSSAV 860
L+ +D WR+HL M+ L +
Sbjct: 771 LLNVIDRKWREHLYEMDYLKEGI 793
Score = 54 (24.1 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 60/254 (23%), Positives = 103/254 (40%)
Query: 171 QGLHYTVELKNNSVELTEEGIALAEMALETN-DLWDENDPWARFVMN-ALKAKEFYRRDV 228
+G+H +E K + VE+ E LA + L+ L+D+ A + E Y+ V
Sbjct: 332 EGMHQAIEAKEH-VEIKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGV 390
Query: 229 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 288
I N + R ++ S+ I++ EAK + V + K
Sbjct: 391 VSIPTNMPMI-------REDQ----SDLIYKTEEAKY--------IAVVDDVAERYAKGQ 431
Query: 289 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRV---DLPIQSFATARGKWEYARQE 345
P L GT E E+L Q +P N+ N + + I + A RG A
Sbjct: 432 PVL---IGTTSVERSEYLSR-QFTKRRIPHNVLNAKYHEQEATIIAVAGRRGGVTVAT-- 485
Query: 346 VESMFRLGRPVLVGSTSVENSEYLSDL-LKQQGI-P-----------HNVLNARPKYAAR 392
+M G +++G N ++L+D L+++G+ P H+ L + A++
Sbjct: 486 --NMAGRGTDIVLGG----NVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASK 539
Query: 393 EAETVAQAGRKYAI 406
EA+ V +AG Y +
Sbjct: 540 EAKEVIEAGGLYVL 553
>TIGR_CMR|DET_0434 [details] [associations]
symbol:DET_0434 "preprotein translocase, SecA subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_181178.1 ProteinModelPortal:Q3Z9C1
STRING:Q3Z9C1 GeneID:3230233 KEGG:det:DET0434 PATRIC:21607937
BioCyc:DETH243164:GJNF-434-MONOMER Uniprot:Q3Z9C1
Length = 952
Score = 790 (283.2 bits), Expect = 4.5e-143, Sum P(4) = 4.5e-143
Identities = 169/353 (47%), Positives = 233/353 (66%)
Query: 83 PEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLIDEG 142
P R+ Y+ DITY ++E GFDYLRDNL + Q V R ++AIVDE+D++LIDE
Sbjct: 238 PISRQEAYKADITYGTSTEFGFDYLRDNLRPDLAQCVQR---EMNYAIVDEIDNLLIDEA 294
Query: 143 RNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALET-- 200
R PL+IS ++ Y V A++A L G Y + K+ + ELTE+G A E L
Sbjct: 295 RTPLIISAPDTEAGKLYEVFARLAPRLAAGKDYEINEKDRNAELTEDGWANVEKLLSREG 354
Query: 201 ----NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSE 255
+ L+D +N P R + NAL AKEFY++D QY+V+ + +II+E TGR+ RR+SE
Sbjct: 355 VMKGSSLYDPQNAPLIRHLRNALSAKEFYKKDHQYVVKENEVIIIDEFTGRMMLGRRYSE 414
Query: 256 GIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIE 315
G+HQA+EAKE +KIQ +S A +T Q+LF++Y KL GMTGTA TE +EF K++++ V+
Sbjct: 415 GLHQAIEAKEHVKIQQESKTYATVTIQNLFRMYRKLCGMTGTAATEAEEFSKIYKLEVVI 474
Query: 316 VPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQ 375
+PTN P IR D Q + K++ E+ M LGRPVLVG+ S+ENSE LS++LK+
Sbjct: 475 IPTNKPAIREDYGDQIYKDQSAKFKAVVNEINEMRNLGRPVLVGTVSIENSEMLSNMLKR 534
Query: 376 QGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDIILGGN--PK 426
QGI H VLNA K +EA+ VA+AG+ A+T++TNMAGRG DI+LGG PK
Sbjct: 535 QGIEHKVLNA--KQHEKEAQVVAEAGKPGAVTVATNMAGRGVDILLGGKEPPK 585
Score = 301 (111.0 bits), Expect = 4.5e-143, Sum P(4) = 4.5e-143
Identities = 79/200 (39%), Positives = 114/200 (57%)
Query: 553 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 612
+V GGLHVIGT HESRRIDNQLRGR+GRQGDPGS+RF V+L D++ ++F + +
Sbjct: 600 QVLEAGGLHVIGTERHESRRIDNQLRGRSGRQGDPGSSRFYVALDDDIMRRFGSERIQGI 659
Query: 613 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 672
+ DE+ PIE + R L Q E Y+F +RK LVE+D+V+ R+ +Y R+
Sbjct: 660 --MEWAGMDENTPIENGLVSRTLENAQKRVEGYHFDVRKHLVEYDDVVNKHREVIYAERR 717
Query: 673 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR-YWSLDKLLKEFIAIAGKILDDL 731
IL GA+ + + + +EI+ +H + Y S + L+ + G I L
Sbjct: 718 KILLGADLKSN-----ILDMIREEIM---TQTAEHTQGYDSSEWNLEGLVTHIGGIFA-L 768
Query: 732 FAGISGDTLLK-SIEELPEL 750
A I+ + L K S EE+ EL
Sbjct: 769 PAEINAEALAKLSQEEITEL 788
Score = 295 (108.9 bits), Expect = 4.5e-143, Sum P(4) = 4.5e-143
Identities = 59/100 (59%), Positives = 73/100 (73%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
+RH+DVQ+IGG VLH G IAEM+TGEGKTLV+TL YLN+L G+GVH+VTVNDYLA+RDA
Sbjct: 129 LRHYDVQLIGGMVLHHGKIAEMRTGEGKTLVATLPLYLNSLLGKGVHLVTVNDYLARRDA 188
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNS 100
WM V+ LG+SV I P E + D TYT+ +
Sbjct: 189 YWMGPVYHALGVSVSSIYPMQTPTEELPSRLFDPTYTSET 228
Score = 60 (26.2 bits), Expect = 4.5e-143, Sum P(4) = 4.5e-143
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 830 MKEVERAVLVKTLDCFWRDHLINMNRL 856
M+ +ER +++ TLD W +HL M L
Sbjct: 809 MRLLERIIMLHTLDSLWVEHLTIMENL 835
Score = 51 (23.0 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 207 NDPWARFVMNALKAKEFYRRDVQY 230
NDPW F + +E Y+ D+ Y
Sbjct: 230 NDPWMHF--RPISRQEAYKADITY 251
Score = 48 (22.0 bits), Expect = 1.9e-24, Sum P(4) = 1.9e-24
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 549 NEGSEVKRLGGLHVIGT-SLHESRRIDNQLRGRAG 582
NE +E++ LG ++GT S+ S + N L+ R G
Sbjct: 503 NEINEMRNLGRPVLVGTVSIENSEMLSNMLK-RQG 536
>TIGR_CMR|GSU_2050 [details] [associations]
symbol:GSU_2050 "preprotein translocase, SecA subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168 HSSP:P43803
RefSeq:NP_953099.1 ProteinModelPortal:Q74BJ1 SMR:Q74BJ1
GeneID:2686041 KEGG:gsu:GSU2050 PATRIC:22026961
BioCyc:GSUL243231:GH27-1960-MONOMER Uniprot:Q74BJ1
Length = 897
Score = 1051 (375.0 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 227/451 (50%), Positives = 302/451 (66%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VLH G IAEMKTGEGKTLV+TL AYLNALTG GVHVVTVNDYLA+RD+
Sbjct: 81 MRHFDVQLIGGMVLHQGKIAEMKTGEGKTLVATLPAYLNALTGRGVHVVTVNDYLARRDS 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM R++RFLGL+VG+I G+ +ERR+ Y DITY N+E GFDYLRDN+ E V
Sbjct: 141 EWMGRLYRFLGLTVGVIVHGIDDDERRAAYAADITYGTNNEFGFDYLRDNMKFALEDYVQ 200
Query: 121 R-----WPKPFHFAIVDEVDSVLIDEGRN--------------PLLISGEASKDVARYPV 161
R ++DE + LI G P L GE K+V +
Sbjct: 201 RPFFFSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRIIPHLKKGEV-KEVEANTL 259
Query: 162 AAKVAELLVQGLHYTVELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKA 220
+ K + G +TV+ K S LTEEG+A E L+ ++L+D V AL+A
Sbjct: 260 SGK--RKVYTG-DFTVDEKARSSSLTEEGVAKVEKLLKIDNLYDPRHMEILHHVNQALRA 316
Query: 221 KEFYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQIT 280
+RRDV Y+V++G+ +I++E TGR+ RRWS+G+HQA+EAKEG++I+ ++ +A IT
Sbjct: 317 HALFRRDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGVEIENENQTLATIT 376
Query: 281 YQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWE 340
+Q+ F++Y KLSGMTGTA TE +EF K++++ V +PTN P +R D P + T R K+
Sbjct: 377 FQNYFRMYEKLSGMTGTADTEAEEFHKIYKLEVTVIPTNRPLLRPDFPDVIYKTEREKFN 436
Query: 341 YARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQA 400
+E++ G+P LVG+ S+E SE L+++L++QGIPHNVLNA K REAE VAQA
Sbjct: 437 AVIEEIKGCHEKGQPTLVGTISIEKSEVLAEILRKQGIPHNVLNA--KQHEREAEIVAQA 494
Query: 401 GRKYAITISTNMAGRGTDIILGGNPKMLAKK 431
GRK +TI+TNMAGRGTDI+LGGNP+ LAK+
Sbjct: 495 GRKGMVTIATNMAGRGTDILLGGNPEGLAKQ 525
Score = 310 (114.2 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 83/214 (38%), Positives = 122/214 (57%)
Query: 536 YLSVLKDCEVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVS 595
Y VL + C+ E EV LGGLH+IGT HESRRIDNQLRGR+GRQGDPGS+RF +S
Sbjct: 538 YEKVLAEYRTLCAREHDEVVALGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLS 597
Query: 596 LQDEMFQKFSFD-TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLV 654
L+D++ + F + S +D + +I +E I I + + Q E + F IRK L+
Sbjct: 598 LEDDLLRIFGSERVSKIMDFL-KI--EEGEAITHGMITKAIENAQKKVEAHNFEIRKHLI 654
Query: 655 EFDEVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLK-HPRYW-S 712
E+D+V+ QR+ +Y R+ IL G + + Q M ++EI ++ + H W S
Sbjct: 655 EYDDVMNKQREVIYTQRREILAG--QDIRRHFTQMMDDTIEEISSFAIEKVSAHEWDWQS 712
Query: 713 LDK-LLKEF---IAIAGKILDDLFAGISGDTLLK 742
+ + +LK + I I + +D L + S TLLK
Sbjct: 713 IGEGILKTYGFQIDIPPQTMDRL-SPESFRTLLK 745
Score = 69 (29.3 bits), Expect = 1.5e-142, Sum P(3) = 1.5e-142
Identities = 9/36 (25%), Positives = 23/36 (63%)
Query: 825 YDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
+ D M + + ++++T+D W+DHL++++ L +
Sbjct: 759 FGDELMDHLIKVIMLQTIDAQWKDHLLSIDHLKEGI 794
Score = 40 (19.1 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 97 TNNSELGFDYLRDNLAANSEQLVMRWPKPFHFAIVDEVDSVLID 140
TN + G D L L N E L +W + A +E + VL +
Sbjct: 504 TNMAGRGTDIL---LGGNPEGLAKQWRRANPDAPEEEYEKVLAE 544
>TIGR_CMR|BA_5421 [details] [associations]
symbol:BA_5421 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF00271 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0004386 GO:GO:0017038
RefSeq:NP_847590.1 RefSeq:YP_022083.1 RefSeq:YP_031277.1
HSSP:P10408 ProteinModelPortal:Q81X26 SMR:Q81X26 DNASU:1085014
EnsemblBacteria:EBBACT00000011636 EnsemblBacteria:EBBACT00000014899
EnsemblBacteria:EBBACT00000020362 GeneID:1085014 GeneID:2818649
GeneID:2851945 KEGG:ban:BA_5421 KEGG:bar:GBAA_5421 KEGG:bat:BAS5038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 BioCyc:BANT260799:GJAJ-5113-MONOMER
BioCyc:BANT261594:GJ7F-5289-MONOMER Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 Uniprot:Q81X26
Length = 835
Score = 1085 (387.0 bits), Expect = 3.9e-142, Sum P(3) = 3.9e-142
Identities = 218/434 (50%), Positives = 302/434 (69%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MR + VQ++GG LH+G+I+EMKTGEGKTL STL YLNALTG+GVHVVTVN+YLAQRDA
Sbjct: 79 MRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLAQRDA 138
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
M ++H FLGL+VG+ M EE++ Y DITY+ N+ELGFDYLRDN+ EQ V
Sbjct: 139 NEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNELGFDYLRDNMVLYKEQCVQ 198
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
R P HFAI+DEVDS+L+DE R PL+ISG+A K Y A L Y+ ++K
Sbjct: 199 R---PLHFAIIDEVDSILVDEARTPLIISGQAQKSTELYMFANAFVRTLENEKDYSFDVK 255
Query: 181 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 239
+V LTE+GI AE A +L+D ++ + AL+A RD Y+V+ G+ +I
Sbjct: 256 TKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVVMHRDTDYVVQEGEIVI 315
Query: 240 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 299
+++ TGR+ + RR+SEG+HQA+EAKEG++IQ +S+ +A IT+Q+ F++Y KLSGMTGTAK
Sbjct: 316 VDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQNYFRMYEKLSGMTGTAK 375
Query: 300 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 359
TEE+EF ++ M VI +PTN P IR D F + +GK+ +++ + + G+PVLVG
Sbjct: 376 TEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMKGKFNAVVEDIVNRHKQGQPVLVG 435
Query: 360 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 419
+ ++E SE +S +L ++G+ HN+LNA K AREA+ +A+AG K A+TI+TNMAGRGTDI
Sbjct: 436 TVAIETSELISKMLTRKGVRHNILNA--KNHAREADIIAEAGMKGAVTIATNMAGRGTDI 493
Query: 420 ILGGNPKMLAKKII 433
LG + K + +I
Sbjct: 494 KLGDDIKNIGLAVI 507
Score = 279 (103.3 bits), Expect = 3.9e-142, Sum P(3) = 3.9e-142
Identities = 57/129 (44%), Positives = 82/129 (63%)
Query: 551 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 610
G ++K +G L VIGT HESRRIDNQLRGRAGRQGDPG T+F +S++DE+ ++F D
Sbjct: 496 GDDIKNIG-LAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMK 554
Query: 611 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 670
A ++ R+ D+ PIE + R + Q E + RK L+++D+VL QR+ +Y
Sbjct: 555 A--MMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQ 612
Query: 671 RQSILTGAN 679
RQ ++ N
Sbjct: 613 RQEVMESEN 621
Score = 62 (26.9 bits), Expect = 3.9e-142, Sum P(3) = 3.9e-142
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 821 QESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVYHNIY 865
+E + M+E E+ V+ + +D W +H+ M+ L ++ Y
Sbjct: 697 KEKLMPEEQMREFEKVVVFRVVDTKWTEHIDAMDHLREGIHLRAY 741
>UNIPROTKB|Q7WWK0 [details] [associations]
symbol:secA "Protein translocase subunit SecA" species:1318
"Streptococcus parasanguinis" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0065002 GO:GO:0017038 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 EMBL:AY333118
ProteinModelPortal:Q7WWK0 SMR:Q7WWK0 IntAct:Q7WWK0 Uniprot:Q7WWK0
Length = 838
Score = 1018 (363.4 bits), Expect = 4.4e-135, Sum P(3) = 4.4e-135
Identities = 200/422 (47%), Positives = 293/422 (69%)
Query: 4 FDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWM 63
+ VQ++GG VLH G + EM+TGEGKTL +T+ YLNAL+G+GVHVVTVN+YL +RDA M
Sbjct: 82 YKVQVMGGIVLHHGDVPEMRTGEGKTLTATMPVYLNALSGKGVHVVTVNEYLTERDATEM 141
Query: 64 ERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMRWP 123
++ +LGLSVG+ P E++ Y CDITY+ NSE+GFDYLRDN+ +E +V R
Sbjct: 142 GELYSWLGLSVGINLAAKSPAEKKEAYLCDITYSTNSEIGFDYLRDNMVVRAENMVQR-- 199
Query: 124 KPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVAR-YPVAAKVAELLVQGLHYTVELKNN 182
P ++A+VDEVDS+LIDE R PL++SG+ + D ++ Y +A + L + Y +++ +
Sbjct: 200 -PLNYALVDEVDSILIDEARTPLIVSGQTASDTSQLYHMADAYVKTLTED-DYIIDVPSK 257
Query: 183 SVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV-RNGKALII 240
++ L++ GI AE +L+D EN F+ NAL+A D+ Y+V + + LI+
Sbjct: 258 TIGLSDSGIDKAESYFNLENLYDIENVALTHFIDNALRANYIMILDIDYVVSEDQEILIV 317
Query: 241 NELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKT 300
++ TGR E RR+S+G+HQA+EAKEG+ +Q ++ A ITYQ+LF++Y KLSGMTGT KT
Sbjct: 318 DQFTGRTMEGRRYSDGLHQAIEAKEGVPVQEETKTSASITYQNLFRMYKKLSGMTGTGKT 377
Query: 301 EEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGS 360
EE+EF +++ + VI +PTN P R+D P + + + K++ ++V+S G+PVLVG+
Sbjct: 378 EEEEFREIYNIRVIPIPTNRPIARIDHPDLLYPSLKSKFKAVVEDVKSRHEKGQPVLVGT 437
Query: 361 TSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDII 420
+VE S+YLS LL Q G+PH VLNA+ Y +EA+ + AG++ A+TI+TNMAGRGTDI
Sbjct: 438 VAVETSDYLSQLLVQAGVPHEVLNAKNHY--KEAQIIMNAGQRGAVTIATNMAGRGTDIK 495
Query: 421 LG 422
LG
Sbjct: 496 LG 497
Score = 278 (102.9 bits), Expect = 4.4e-135, Sum P(3) = 4.4e-135
Identities = 62/160 (38%), Positives = 95/160 (59%)
Query: 551 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 610
G V+ LGGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+DE+ ++F +
Sbjct: 497 GEGVRELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRFGSERIK 556
Query: 611 AVDLISRIT-NDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYD 669
AV + R ++E+ I + RQ+ G Q E + RK ++++D+V+ QR+ +Y
Sbjct: 557 AV--LDRFKLSEEESVIRSNMFTRQVEGAQKRVEGNNYDTRKQVLQYDDVMREQREIIYA 614
Query: 670 LRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPR 709
R ++T AN + +I ++ + I+ G K R
Sbjct: 615 ERYDVIT-ANRDLAPEIKAMIKRTIKRIVEGASHSSKEER 653
Score = 63 (27.2 bits), Expect = 4.4e-135, Sum P(3) = 4.4e-135
Identities = 12/45 (26%), Positives = 29/45 (64%)
Query: 816 YLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
Y + V + R D+ ++E ++ ++++ +D W DH+ +++L +AV
Sbjct: 696 YASQVAKLR-DEESVQEFQKVLILRVVDSKWTDHIDALDQLRNAV 739
>TIGR_CMR|APH_1178 [details] [associations]
symbol:APH_1178 "preprotein translocase, SecA subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000235 GenomeReviews:CP000235_GR InterPro:IPR014001
SMART:SM00487 GO:GO:0017038 eggNOG:COG0653 KO:K03070
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_505716.1 ProteinModelPortal:Q2GIT5
SMR:Q2GIT5 STRING:Q2GIT5 GeneID:3930719 KEGG:aph:APH_1178
PATRIC:20951136 OMA:NMEVIEI BioCyc:APHA212042:GHPM-1184-MONOMER
Uniprot:Q2GIT5
Length = 873
Score = 1056 (376.8 bits), Expect = 1.7e-133, Sum P(3) = 1.7e-133
Identities = 223/439 (50%), Positives = 300/439 (68%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG LH G IAEMKTGEGKTLV+TLAAYLNAL +GVHVVTVNDYLA+RD+
Sbjct: 82 MRHFDVQLIGGIALHRGMIAEMKTGEGKTLVATLAAYLNALESKGVHVVTVNDYLAERDS 141
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM +++ LG+SVG I E R++ Y CDI Y+ N+ELGFDYLRDN+ + E +V
Sbjct: 142 EWMGKLYSALGISVGCITSSSSDEARKAAYNCDILYSTNNELGFDYLRDNMKFSRENMVQ 201
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAAKVAELLVQGLHYTVEL 179
R +++AIVDEVDS+LIDE R PL+ISG +D + Y V A V +L + Y ++
Sbjct: 202 RG---YNYAIVDEVDSILIDESRTPLIISGPVERDSSLYGKVDALVRDLEQED--YDIDE 256
Query: 180 KNNSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYI 231
K+ + LTE+G E L E + L+ EN +V AL+A + Y D YI
Sbjct: 257 KSKTAFLTEDGALKVEQLLISHQLIPEGSSLYSAENIIMMHYVGQALRAHKLYFADKDYI 316
Query: 232 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 291
V+NG +II+E TGR+ + RR+S+G+HQA+EAKEG++I ++ +A T+Q+ F++Y +L
Sbjct: 317 VKNGSVVIIDEFTGRMMDGRRYSDGLHQALEAKEGVRINNENQTLASTTFQNYFRMYKRL 376
Query: 292 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 351
SGMTGTA+TE EFL + + V+++PTN+P RVDL + T K+E + +
Sbjct: 377 SGMTGTAETEADEFLGTYNLQVMQIPTNVPVQRVDLDDDIYCTEEEKYEAVIDFIIECHK 436
Query: 352 LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 411
+P LVG+ S+E SE LS LL +GI H+VLNAR Y +EA +AQAG+ A+TI+TN
Sbjct: 437 RKQPTLVGTISIEKSELLSKLLTMRGIKHSVLNAR--YHEKEAYIIAQAGKPGAVTIATN 494
Query: 412 MAGRGTDIILGGNPKMLAK 430
MAGRGTDI LGGNP+MLA+
Sbjct: 495 MAGRGTDIKLGGNPEMLAR 513
Score = 233 (87.1 bits), Expect = 1.7e-133, Sum P(3) = 1.7e-133
Identities = 53/122 (43%), Positives = 73/122 (59%)
Query: 554 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 613
V + GGL +IGT HESRRIDNQLRGR+GRQGDPG ++F +SL+D + + F D
Sbjct: 543 VMQAGGLCIIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDGLLRIFGSDK--VRG 600
Query: 614 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 673
++ R+ I+ I R + Q E + IRKSL+ FD+V+ QRK ++ R
Sbjct: 601 MLKRLGMKRGEAIQHKWINRAIERAQKKVEARNYDIRKSLLRFDDVINEQRKVIFAQRNQ 660
Query: 674 IL 675
IL
Sbjct: 661 IL 662
Score = 55 (24.4 bits), Expect = 1.7e-133, Sum P(3) = 1.7e-133
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 835 RAVLVKTLDCFWRDHLINMNRLSSAV 860
R VL+ +LD W DHL ++ L +
Sbjct: 759 RRVLITSLDHLWTDHLAALDSLKCGI 784
>TIGR_CMR|SPO_0057 [details] [associations]
symbol:SPO_0057 "preprotein translocase, SecA subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_165331.1 ProteinModelPortal:Q5LWK0 GeneID:3194508
KEGG:sil:SPO0057 PATRIC:23373349 Uniprot:Q5LWK0
Length = 901
Score = 1012 (361.3 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 217/442 (49%), Positives = 295/442 (66%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
+R FD Q++GG LH G+I+EMKTGEGKTLV+T AYLNALTG+GVHVVTVN+YLA+RD+
Sbjct: 83 LRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALTGKGVHVVTVNEYLAKRDS 142
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM +V LG++ G+I G E+ + Y DITY N+ELGFDYLRDN+ ++
Sbjct: 143 EWMGKVFAALGMTTGVIWSGQPDAEKMAAYESDITYATNNELGFDYLRDNMKGELSEV-- 200
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
+ K +FAIVDEVDS+LIDE R PL+ISG A +D + VA + H+ ++ K
Sbjct: 201 -YQKQHNFAIVDEVDSILIDEARTPLIISGPA-QDRSDLYVAIDALLPALSDDHFELDEK 258
Query: 181 NNSVELTEEGIALAEMAL-------ETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 232
+V T+EG E L E L+D E+ V L+A + ++RD YIV
Sbjct: 259 TRNVTFTDEGNEFLEAQLVARGLLPEGQSLYDPESTTIVHHVNQGLRAHKLFQRDKDYIV 318
Query: 233 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 292
R+G+ ++I+E TGR+ RR S+G+HQA+EAKE +IQ ++V +A +T+Q+ F+LY KLS
Sbjct: 319 RDGEVVLIDEFTGRMMPGRRLSDGLHQAIEAKENAQIQPENVTLASVTFQNYFRLYDKLS 378
Query: 293 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 352
GMTGTA TE +EF +++ + V+EVPTN P R D Q + TA K+ E +
Sbjct: 379 GMTGTALTEAEEFAEIYGLGVVEVPTNRPIARTDEDDQVYRTAAEKYGAMIDETKKAHEK 438
Query: 353 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 412
G+PVL+G+TS+E SE LS +L ++GI HNVLNAR REA+ VA+AGR A+TI+TNM
Sbjct: 439 GQPVLLGTTSIEKSEMLSQMLTKEGIEHNVLNARQH--EREAQIVAEAGRYGAVTIATNM 496
Query: 413 AGRGTDIILGGNPKMLAKKIIE 434
AGRGTDI LGGN +M K++E
Sbjct: 497 AGRGTDIQLGGNVEM---KVLE 515
Score = 249 (92.7 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 63/187 (33%), Positives = 100/187 (53%)
Query: 544 EVHCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQK 603
E + E +V GGL+V+ + HESRRIDNQLRGR+GRQGDPG T F +SL+D++ +
Sbjct: 533 EARHAEEKQKVLDAGGLYVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRI 592
Query: 604 FSFDTSWAVDLISRITNDEDMPIEGDAIV-----RQLLGLQISAEKYYFGIRKSLVEFDE 658
F + + ++ M EG+AI+ + L Q E F +RK++++FD+
Sbjct: 593 FGSER------LDKVLTTLGMK-EGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDD 645
Query: 659 VLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLK 718
V+ QRK +++ R+ I+ A E S + + V+D++I + P + W L
Sbjct: 646 VMNDQRKVIFNQRREIM--ATEDLSDVVADMREQVIDDLIDEYMPPKTYADQWDTQGLYA 703
Query: 719 EFIAIAG 725
I G
Sbjct: 704 AVIEKLG 710
Score = 80 (33.2 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 830 MKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
M+ +E+ VL++T+D WR+HL+ + L S V
Sbjct: 753 MRNIEKQVLLQTIDSKWREHLLKLEHLRSVV 783
>TIGR_CMR|CJE_1020 [details] [associations]
symbol:CJE_1020 "preprotein translocase, SecA subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
Pfam:PF00271 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0003676 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004386
GO:GO:0017038 HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_179018.1 ProteinModelPortal:Q5HUL7
STRING:Q5HUL7 GeneID:3231531 KEGG:cjr:CJE1020 PATRIC:20043841
BioCyc:CJEJ195099:GJC0-1048-MONOMER Uniprot:Q5HUL7
Length = 862
Score = 989 (353.2 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 208/431 (48%), Positives = 289/431 (67%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VLHDG IAEMKTGEGKTLV+TL LNA++G+GVHVVTVNDYLA+RDA
Sbjct: 82 MRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLNAMSGKGVHVVTVNDYLAKRDA 141
Query: 61 EWMERVHRFLGLSVGLIQRGMIPE-ERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLV 119
E M ++ FLG SVG++ + E + Y CDITY N+E GFDYLRDN+ + + V
Sbjct: 142 EQMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDCDITYGTNNEFGFDYLRDNMKFSKAEKV 201
Query: 120 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGL------ 173
R +F IVDEVDS+LIDE R PL+ISG ++ + Y A +VA+ + +G
Sbjct: 202 QR---EHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIKANEVAKQMQKGEAVLPPA 258
Query: 174 ----HYTVELKNNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDV 228
+ V+ KN ++ +TE GIA AE +L+ +N A + ALKA + +DV
Sbjct: 259 KPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYSLDNAILAHQLDQALKAHNLFEKDV 318
Query: 229 QYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLY 288
Y++RN + +I++E TGR+ E RR+SEG+HQA+EAKE +KIQ +S +A IT+Q+ F++Y
Sbjct: 319 HYVLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAKENVKIQEESQTLADITFQNYFRMY 378
Query: 289 PKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVES 348
KL+GMTGTA+TE EF +++ + VI +PTN+P R D + T K++ +E++
Sbjct: 379 NKLAGMTGTAQTEATEFSQIYSLDVISIPTNIPIKRQDKDDLIYKTQNEKFKAVIEEIKK 438
Query: 349 MFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITI 408
G+PVLVG+ S+E SE ++L ++ IPH+VLNA K +EA + AG+K A+TI
Sbjct: 439 ANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLNA--KNHEQEALIIQDAGKKGAVTI 496
Query: 409 STNMAGRGTDI 419
+TNMAGRG DI
Sbjct: 497 ATNMAGRGVDI 507
Score = 279 (103.3 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 62/149 (41%), Positives = 88/149 (59%)
Query: 553 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 612
E++ LGGL++IGT HESRRIDNQLRGRAGRQGDPG +RF +SL+D + + F D ++
Sbjct: 512 EIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGDRIKSI 571
Query: 613 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 672
+ R+ +E IE + R + Q E +F RK L+E+D+V QRK +Y R
Sbjct: 572 --MDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYRN 629
Query: 673 SILT---GANESCSQQIFQYMQAVVDEII 698
+L SQ I +Y V+++ I
Sbjct: 630 ELLDENYDIRAKISQNIAEYSANVMNDYI 658
Score = 73 (30.8 bits), Expect = 3.5e-133, Sum P(3) = 3.5e-133
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 787 CSDDLTKNGRYRATTNLLRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFW 846
CS +++ + ++ L IL SY + SR + ++ +ER + ++ LD W
Sbjct: 679 CSTQISEKDFENLSVIEMQDKLSQILENSYNEKM--SRLEIKELRNIERILYLQVLDNAW 736
Query: 847 RDHLINMNRLSSAV 860
R+HL M+ L + +
Sbjct: 737 REHLYQMDILKTGI 750
>TIGR_CMR|NSE_0232 [details] [associations]
symbol:NSE_0232 "preprotein translocase, SecA subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 OMA:NMEVIEI
RefSeq:YP_506126.1 ProteinModelPortal:Q2GEH0 STRING:Q2GEH0
GeneID:3931784 KEGG:nse:NSE_0232 PATRIC:22680561
ProtClustDB:CLSK2528079 BioCyc:NSEN222891:GHFU-262-MONOMER
Uniprot:Q2GEH0
Length = 804
Score = 1014 (362.0 bits), Expect = 5.0e-132, Sum P(3) = 5.0e-132
Identities = 219/432 (50%), Positives = 298/432 (68%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQI+GG VLH G I+EM TGEGKTLV+TLAAYLNAL+ +GVHVVTVNDYLA+RD
Sbjct: 81 MRHFDVQIMGGIVLHWGMISEMHTGEGKTLVATLAAYLNALSEKGVHVVTVNDYLARRDT 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM++++R LGL V I M ER Y+ DITY N+ELGFDYLRDN+ + ++V
Sbjct: 141 EWMKQIYRHLGLQVSCITSDMRDPERAHAYKADITYATNNELGFDYLRDNMKFSKGEMVQ 200
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
R H+AIVDEVDS+LIDE R PL+ISG Y K+AE L L Y V+ K
Sbjct: 201 R---DLHYAIVDEVDSILIDEARTPLIISGVTDNASYLYASMNKLAEKLDSTL-YIVDEK 256
Query: 181 NNSVELTEEG------IALAEMALET-NDLWD-ENDPWARFVMNALKAKEFYRRDVQYIV 232
+V LTEEG + +AE +E+ + L++ +N + +LKA ++++ YIV
Sbjct: 257 TRTVSLTEEGQEAIEKLLMAEKFIESGSSLYEPQNLQLVHCLNQSLKAINLFQKNKDYIV 316
Query: 233 RNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLS 292
++G+ ++I+E TGR+ RR+SEG+HQA+EAKE LKIQ ++ +A IT+Q+ F++Y KLS
Sbjct: 317 QDGQIVLIDEFTGRMMHGRRYSEGLHQALEAKENLKIQNENQTLASITFQNYFRMYGKLS 376
Query: 293 GMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRL 352
GMTGTA TE +EF ++ + V+++P++LP RVD + +A+ + K+E +
Sbjct: 377 GMTGTAATEREEFSTIYGLEVVQIPSHLPVRRVDHDDEIYASKKEKYEAILALAKECHEK 436
Query: 353 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNM 412
+P+L+G+TS+ENSE LS LK+ + H+VLNA K A EAE +AQAG+ AITI+TNM
Sbjct: 437 LQPILIGTTSIENSEELSRELKKAKLKHSVLNA--KQHAFEAEIIAQAGKPGAITIATNM 494
Query: 413 AGRGTDIILGGN 424
AGRGTDI LGGN
Sbjct: 495 AGRGTDIQLGGN 506
Score = 259 (96.2 bits), Expect = 5.0e-132, Sum P(3) = 5.0e-132
Identities = 56/130 (43%), Positives = 83/130 (63%)
Query: 546 HCSNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS 605
H NE V++ GGL+VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL D++ + F
Sbjct: 521 HAKNE-EIVRKAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGESKFFLSLDDDLLRVFG 579
Query: 606 FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 665
TS +++ + ++ I+ I R L Q E + IRK+L++FD+V+ QRK
Sbjct: 580 --TSGIRNMLKKQLSNNGA-IKHSYITRSLEKAQKKVESRNYEIRKNLIKFDDVINEQRK 636
Query: 666 HVYDLRQSIL 675
++ R +I+
Sbjct: 637 VIFSQRNNIM 646
Score = 57 (25.1 bits), Expect = 5.0e-132, Sum P(3) = 5.0e-132
Identities = 8/42 (19%), Positives = 24/42 (57%)
Query: 819 VVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
+ ++ R ++ E+++ +++ LD W++HL + L ++
Sbjct: 712 IAEKERAHVEFLLEIKKRIMIAILDQLWKEHLQFLENLRLSI 753
>TIGR_CMR|ECH_1149 [details] [associations]
symbol:ECH_1149 "preprotein translocase, SecA subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:YP_507933.1 ProteinModelPortal:Q2GF50 SMR:Q2GF50
STRING:Q2GF50 GeneID:3927909 KEGG:ech:ECH_1149 PATRIC:20577624
BioCyc:ECHA205920:GJNR-1152-MONOMER Uniprot:Q2GF50
Length = 862
Score = 1035 (369.4 bits), Expect = 9.9e-131, Sum P(2) = 9.9e-131
Identities = 220/463 (47%), Positives = 311/463 (67%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VLH G I+EMKTGEGKTLV+TLAAYLNAL G+GVH+VTVNDYLA+RDA
Sbjct: 80 MRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALEGKGVHIVTVNDYLAKRDA 139
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM ++ LG++VG I ER++ Y CDI Y+ N+ LGFDYLRDN+ + +++V
Sbjct: 140 EWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNNLGFDYLRDNMKFSRDEMVQ 199
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYP-VAAKVAELLVQGLHYTVEL 179
R F++AIVDEVDS+LIDE R PL+ISG+ +D+ Y + + EL + Y +E
Sbjct: 200 RG---FNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDNLIYELAEED--YELEE 254
Query: 180 KNNSVELTEEGIALAE-MALETN------DLWD-ENDPWARFVMNALKAKEFYRRDVQYI 231
KN ++ LTE GI E + ++ N L+D +N ++ AL+A + + D YI
Sbjct: 255 KNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQALRAHKMFAVDKDYI 314
Query: 232 VRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKL 291
+++G +II+E TGR+ + RR+S+G+HQA+EAKE L I +++ +A T+Q+ F++Y KL
Sbjct: 315 IKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTLASTTFQNYFRMYTKL 374
Query: 292 SGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFR 351
SGMTGTA+TE +EFL ++ + V+++PTN+P R+DL + T K+ + + +
Sbjct: 375 SGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEEEKFNSVIKFISECHK 434
Query: 352 LGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN 411
+PVLVG+ S+E SE LS LL + + H+VLNAR Y +EA +AQAG ITI+TN
Sbjct: 435 KLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNAR--YHEQEAYIIAQAGIPGTITIATN 492
Query: 412 MAGRGTDIILGGNPKMLAKKIIEDRXXXXXTREALNVEVDDKT 454
MAGRGTDI LGGN KMLAK + + +EA+ ++ T
Sbjct: 493 MAGRGTDIQLGGNLKMLAKTALAN----ITDKEAIEIKYKQLT 531
Score = 268 (99.4 bits), Expect = 9.9e-131, Sum P(2) = 9.9e-131
Identities = 79/209 (37%), Positives = 115/209 (55%)
Query: 549 NEGSEVK-RLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFD 607
N E+ + GGL VIGT HESRRIDNQLRGR+GRQGDPG ++F +SL+D++ + F D
Sbjct: 535 NRDKEIAIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSD 594
Query: 608 TSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHV 667
V + ++ +D I+ I R + Q E + IRKSL++FD V+ QRK V
Sbjct: 595 KIKGV--LQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVV 652
Query: 668 YDLRQSILTGANESCSQQIFQYMQA-VVDEIIFGNVDPLKHPRYWSLDK-----LLKEFI 721
+D R IL + S I++ + + +V+ II H +Y++LD L EF
Sbjct: 653 FDQRNKILDSDSYDISI-IYRDLNSDIVNSII--------HDKYYNLDDDTYKALSSEFT 703
Query: 722 AIAGKILDDLFAGISG-DTLLKSIEELPE 749
I LD ++ IS ++ K +E L E
Sbjct: 704 RIYNITLD--YSTISNFESKDKVLEHLNE 730
Score = 63 (27.2 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 30/114 (26%), Positives = 51/114 (44%)
Query: 749 ELNSIDINNFYFPDLPKPPNLFRGIRRK-SSSLKRWLAICSDDLTKNGRYRATTNLLRKY 807
+LNS DI N D K NL + SS R I D T + + + +L ++
Sbjct: 673 DLNS-DIVNSIIHD--KYYNLDDDTYKALSSEFTRIYNITLDYSTISN-FESKDKVL-EH 727
Query: 808 LGDILIASYLNVVQE-SRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
L + + + ++E + D V + V++ +LD WRDHL ++ L +
Sbjct: 728 LNETVDEHFAQKIEEFTLKDQKAWDHVVKKVMIMSLDYLWRDHLAALDSLKCGI 781
Score = 50 (22.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 26/113 (23%), Positives = 46/113 (40%)
Query: 658 EVLEVQRKHVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDP--LKHPRYW---- 711
+ L + +Y++ T +N ++ +++ VDE ++ LK + W
Sbjct: 696 KALSSEFTRIYNITLDYSTISNFESKDKVLEHLNETVDEHFAQKIEEFTLKDQKAWDHVV 755
Query: 712 ------SLDKLLKEFIAIAGKILDDLFAGISGDTLLKSIEELPELNSIDINNF 758
SLD L ++ +A LD L GI+ L+SI + LN F
Sbjct: 756 KKVMIMSLDYLWRDHLAA----LDSLKCGIN----LRSIAQKDPLNEFKAEAF 800
>NCBI_NP|NP_357091.2 [details] [associations]
symbol:secA "preprotein translocase subunit SecA"
species:176299 "Agrobacterium fabrum str. C58" [GO:0015627 "type II
protein secretion system complex" evidence=ISS] [GO:0015628
"protein secretion by the type II secretion system" evidence=ISS]
REFSEQ:NC_003063 Ncbi:NP_357091
Length = 902
Score = 990 (353.6 bits), Expect = 3.1e-130, Sum P(3) = 3.1e-130
Identities = 217/442 (49%), Positives = 291/442 (65%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MR FDVQ+ G +LH G+IAEMKTGEGKTLV+TLA YLNAL G+GVHVVTVNDYLA+RDA
Sbjct: 83 MRPFDVQLTGAMILHGGAIAEMKTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLAKRDA 142
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
M +++ FLGL+ G+I G+ ++RR Y CDITY N+ELGFDYLRDN+ + Q+V
Sbjct: 143 ATMSKLYGFLGLTTGVIVHGLDDDQRREAYACDITYATNNELGFDYLRDNMKYDRAQMVQ 202
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
R ++AIVDEVDS+L+DE R PL+ISG Y LL Y ++ K
Sbjct: 203 RG---HNYAIVDEVDSILVDEARTPLIISGPLDDRSDLYNTIDAFIPLLSPE-DYEIDEK 258
Query: 181 NNSVELTEEGIA----LAEMA--LETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVR 233
S +E+G L A L+ L+D EN + NALKA + + RD YIVR
Sbjct: 259 QRSANFSEDGTEKLENLLRQAGLLKGESLYDIENVAIVHHINNALKAHKLFTRDKDYIVR 318
Query: 234 NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSG 293
N + +II+E TGR+ RR+SEG HQA+EAKE ++IQ ++ ++ +T+Q+ F++Y KL+G
Sbjct: 319 NDEIVIIDEFTGRMMPGRRYSEGQHQALEAKEKVQIQPENQTLSSVTFQNYFRMYEKLAG 378
Query: 294 MTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLG 353
MTGTA TE +EF ++ + VIEVPTNLP R+D + + T K+ E+++ G
Sbjct: 379 MTGTASTEAEEFGNIYGLDVIEVPTNLPIQRIDEDDEVYRTGEEKFLAIITEIKAAHERG 438
Query: 354 RPVLVGSTSVENSEYLSDLLKQQGIPH-NVLNARPKYAAREAETVAQAGRKYAITISTNM 412
+PVLVG+TS+E SE L+ +L+Q G VLNAR Y +EA V+QAG A+TI+TNM
Sbjct: 439 QPVLVGTTSIEKSELLAHMLRQSGFTDFQVLNAR--YHEQEAYIVSQAGVPGAVTIATNM 496
Query: 413 AGRGTDIILGGNPKMLAKKIIE 434
AGRGTDI LGGN M ++ +E
Sbjct: 497 AGRGTDIQLGGNVDMRLERELE 518
Score = 234 (87.4 bits), Expect = 3.1e-130, Sum P(3) = 3.1e-130
Identities = 66/213 (30%), Positives = 115/213 (53%)
Query: 558 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD-LIS 616
GGL+VI T HESRRIDNQLRGR+GRQGDPG ++F +SLQD++ + F S +D ++
Sbjct: 548 GGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFG---SERMDSMLQ 604
Query: 617 RITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILT 676
++ + I I + L Q E F RK+L+++D+VL QRK ++D R ++
Sbjct: 605 KLGLKDGEAIVHPWINKALERAQKKVEARNFETRKNLLKYDDVLNDQRKVIFDQRLELME 664
Query: 677 GAN--ESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL---LKEFIAIAGKILD-D 730
N E+ + + ++A+V + I N + W + L + +F+ + + +
Sbjct: 665 ADNIGETAADMRHEVIEALVTKHIPENA----YAEQWDIAGLKAGIAQFLNLDLPVEEWA 720
Query: 731 LFAGISGDTLLKSIEELPELNSIDINNFYFPDL 763
GI+ D +L+ + E + + + + P++
Sbjct: 721 KEEGIAEDDILQRVTEAADTYAAERAERFGPEI 753
Score = 89 (36.4 bits), Expect = 3.1e-130, Sum P(3) = 3.1e-130
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 824 RYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
R+ M VER+V+++T+D WR+H++N++ L S V
Sbjct: 748 RFGPEIMTYVERSVILQTIDHLWREHIVNLDHLRSVV 784
Score = 42 (19.8 bits), Expect = 4.1e-102, Sum P(2) = 4.1e-102
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 660 LEVQRKHVYDLRQSILTGANESCSQQIFQ 688
L+ + ++L QS+LT E+ + Q+ +
Sbjct: 795 LQEYKAEAFELFQSLLTNLREAVTAQLMR 823
>TIGR_CMR|CBU_0147 [details] [associations]
symbol:CBU_0147 "preprotein translocase, SecA subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] [GO:0015627 "type II protein secretion
system complex" evidence=ISS] [GO:0015628 "protein secretion by the
type II secretion system" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:NP_819197.2 HSSP:P43803 ProteinModelPortal:Q83F06 SMR:Q83F06
PRIDE:Q83F06 GeneID:1208018 KEGG:cbu:CBU_0147 PATRIC:17928977
BioCyc:CBUR227377:GJ7S-148-MONOMER Uniprot:Q83F06
Length = 913
Score = 539 (194.8 bits), Expect = 1.2e-129, Sum P(4) = 1.2e-129
Identities = 116/258 (44%), Positives = 167/258 (64%)
Query: 175 YTVELKNNSVELTEEG------IALAEMALETND-LWD-ENDPWARFVMNALKAKEFYRR 226
YT++ KN LTE+G + + + ++ + L+D N +V AL+A + R
Sbjct: 268 YTLDEKNRQAYLTEQGHRTIEALMIKQGLMQAGESLYDVSNISLMHYVYAALRAHTLFYR 327
Query: 227 DVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFK 286
DV YIV+N + +I++E TGR+ RRWS+G+HQAVEAKEG IQ ++ +A IT+Q+ F+
Sbjct: 328 DVHYIVKNNEVIIVDEHTGRLMPGRRWSDGLHQAVEAKEGATIQLENQTLATITFQNYFR 387
Query: 287 LYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEV 346
LY KLSGMT TA TE E K++ + V+ +PTN P IR D Q + TA K++ EV
Sbjct: 388 LYEKLSGMTATADTEAFELQKIYGLEVVVIPTNRPMIRRDESDQVYLTADAKFDAIVNEV 447
Query: 347 ESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAI 406
+ G+P+L+G+ S+E SE ++ LK+ I H +LNA K REA+ +A+AGR A+
Sbjct: 448 KKRHEKGQPLLIGTASIEASELVARFLKKANIKHEILNA--KNHEREAKIIAEAGRPGAV 505
Query: 407 TISTNMAGRGTDIILGGN 424
TI+TNMAGRGTDI+LGGN
Sbjct: 506 TIATNMAGRGTDIVLGGN 523
Score = 527 (190.6 bits), Expect = 1.2e-129, Sum P(4) = 1.2e-129
Identities = 110/206 (53%), Positives = 142/206 (68%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
+RHFDVQIIGG LH G IAEM+TGEGKTL +T+ AYLNALTG+GVH+VTVNDYLA+RDA
Sbjct: 81 LRHFDVQIIGGLALHGGKIAEMRTGEGKTLGATMPAYLNALTGKGVHIVTVNDYLAKRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM+ ++ FLGL+VG+ GM P E+++ Y DITY N+E GFDYLRDN+ + +Q V
Sbjct: 141 EWMKPIYEFLGLTVGVNVPGMEPVEKQAAYAADITYGTNNEFGFDYLRDNMVFDLDQRVQ 200
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAK-VAELLVQGLH----- 174
R P H+AI+DEVDS+LIDE R PL+ISG+A + Y K + +L +Q +
Sbjct: 201 R---PLHYAIIDEVDSILIDEARTPLIISGQAEESSDLYVKINKFIPQLKLQKMEEGQKE 257
Query: 175 ----------YTVELKNNSVELTEEG 190
YT++ KN LTE+G
Sbjct: 258 EEVPPENRGDYTLDEKNRQAYLTEQG 283
Score = 276 (102.2 bits), Expect = 1.2e-129, Sum P(4) = 1.2e-129
Identities = 67/170 (39%), Positives = 96/170 (56%)
Query: 558 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 617
GGLHV+GT HESRRIDNQLRGR+GRQGDPGS++F +S++D + + F+ + +++ R
Sbjct: 557 GGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYLSMEDNLLRIFAAERM--SNMMRR 614
Query: 618 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 677
+ ED IE I R + Q E F IRK L+E+D+V QRK +Y R +L
Sbjct: 615 LGVKEDDVIEHPWITRAIEKAQRRVEGMNFDIRKQLLEYDDVANDQRKVIYQQRFQLLQ- 673
Query: 678 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWS---LDKLLKEFIAIA 724
+ S+ I + V E+I V P W L+K ++E +A
Sbjct: 674 -TDDISETIEAIREEAVSEMISSFVPPQSLEEEWDIPGLEKQIREDFGLA 722
Score = 82 (33.9 bits), Expect = 1.2e-129, Sum P(4) = 1.2e-129
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 804 LRKYLGDILIASYLNVVQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAVY 861
L K + D + +Y +E++ D M+EVE+ ++++ LD W++HL M+ L ++
Sbjct: 740 LHKRIIDEITKAYK--AKEAKADPKAMREVEKTLMLQLLDHHWKEHLAAMDHLRQGIH 795
>TIGR_CMR|BA_0882 [details] [associations]
symbol:BA_0882 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:NP_843394.1 RefSeq:YP_017518.1 RefSeq:YP_027114.1
HSSP:P28366 ProteinModelPortal:Q81UI7 IntAct:Q81UI7 DNASU:1088471
EnsemblBacteria:EBBACT00000009335 EnsemblBacteria:EBBACT00000014039
EnsemblBacteria:EBBACT00000020428 GeneID:1088471 GeneID:2818591
GeneID:2848526 KEGG:ban:BA_0882 KEGG:bar:GBAA_0882 KEGG:bat:BAS0838
OMA:FGIDNLY ProtClustDB:PRK09200 BioCyc:BANT260799:GJAJ-918-MONOMER
BioCyc:BANT261594:GJ7F-948-MONOMER Uniprot:Q81UI7
Length = 788
Score = 1002 (357.8 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 206/423 (48%), Positives = 290/423 (68%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
+RH+DVQ+IGG VL +G+IAEM TGEGKTLVS+L Y+ AL G+GVHV+TVNDYLA+RD
Sbjct: 80 LRHYDVQLIGGLVLLEGNIAEMPTGEGKTLVSSLPTYVRALEGKGVHVITVNDYLAKRDK 139
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
E + +VH FLGL VGL + P E++ Y DITY +E GFDYLRDN+AA+ + V
Sbjct: 140 ELIGQVHEFLGLKVGLNIPQIDPSEKKLAYEADITYGIGTEFGFDYLRDNMAASKNEQVQ 199
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVELK 180
R P+HFAI+DE+DSVLIDE + PL+I+G+ S + + AKV + LHYT + +
Sbjct: 200 R---PYHFAIIDEIDSVLIDEAKTPLIIAGKKSSSSDLHYLCAKVIKSFQDTLHYTYDAE 256
Query: 181 NNSVELTEEGIALAEMALETNDLWD-ENDPWARFVMNALKAKEFYRRDVQYIVRNGKALI 239
+ S TE+GI E + ++L+D E+ +++ AL+A ++ DV YIV + K L+
Sbjct: 257 SKSASFTEDGITKIEDLFDIDNLYDLEHQTLYHYMIQALRAHVAFQCDVDYIVHDEKILL 316
Query: 240 INELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAK 299
++ TGRV + R S+G+HQA+EAKEGL+I ++ A IT Q+ F++YP LSGMTGTAK
Sbjct: 317 VDIFTGRVMDGRSLSDGLHQALEAKEGLEITEENQTQASITIQNFFRMYPALSGMTGTAK 376
Query: 300 TEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVG 359
TEEKEF +++ M V+ +PTN P IR D + TA K++ R++V + GRP+L+G
Sbjct: 377 TEEKEFNRVYNMEVMPIPTNRPIIREDKKDVVYVTADAKYKAVREDVLKHNKQGRPILIG 436
Query: 360 STSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGTDI 419
+ S+ SE ++ L + I + +LNA K A +EA+ +A AG+K ITI+TNMAGRGTDI
Sbjct: 437 TMSILQSETVARYLDEANITYQLLNA--KSAEQEADLIATAGQKGQITIATNMAGRGTDI 494
Query: 420 ILG 422
+LG
Sbjct: 495 LLG 497
Score = 252 (93.8 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 63/176 (35%), Positives = 98/176 (55%)
Query: 551 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 610
G V LGGLHVIGT HESRR+DNQL+GRAGRQGDPGS++F +SL+DEM ++F+ +
Sbjct: 497 GEGVHELGGLHVIGTERHESRRVDNQLKGRAGRQGDPGSSQFFLSLEDEMLKRFAQEE-- 554
Query: 611 AVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDL 670
L + DE I + + Q+ E +F +R+ ++ D+V+ QR +Y L
Sbjct: 555 VEKLTKSLKTDETGLILTSKVHDFVNRTQLICEGSHFSMREYNLKLDDVINDQRNVIYKL 614
Query: 671 RQSIL---TGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAI 723
R ++L T E I ++A+ + + + P + + SL L E +++
Sbjct: 615 RNNLLQEDTNMIEIIIPMIDHAVEAISKQYLVEGMLPEEWD-FASLTASLNEILSV 669
>UNIPROTKB|P10408 [details] [associations]
symbol:secA species:83333 "Escherichia coli K-12"
[GO:0005515 "protein binding" evidence=IPI] [GO:0065002
"intracellular protein transmembrane transport" evidence=IMP]
[GO:0015031 "protein transport" evidence=IMP] [GO:0006605 "protein
targeting" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0043952 "protein transport by the Sec complex" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0017038 "protein
import" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0065002 EMBL:X55034
TCDB:3.A.5.1.1 EMBL:M19211 GO:GO:0017038 EMBL:M20791 eggNOG:COG0653
KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 GO:GO:0043952 PIR:B64732
RefSeq:NP_414640.1 RefSeq:YP_488403.1 PDB:1TM6 PDB:2FSF PDB:2FSG
PDB:2FSH PDB:2FSI PDB:2VDA PDB:3BXZ PDBsum:1TM6 PDBsum:2FSF
PDBsum:2FSG PDBsum:2FSH PDBsum:2FSI PDBsum:2VDA PDBsum:3BXZ
ProteinModelPortal:P10408 SMR:P10408 DIP:DIP-10840N IntAct:P10408
MINT:MINT-1224866 PaxDb:P10408 PRIDE:P10408
EnsemblBacteria:EBESCT00000001277 EnsemblBacteria:EBESCT00000016064
GeneID:12932123 GeneID:944821 KEGG:ecj:Y75_p0097 KEGG:eco:b0098
PATRIC:32115301 EchoBASE:EB0929 EcoGene:EG10936 BioCyc:EcoCyc:SECA
BioCyc:ECOL316407:JW0096-MONOMER EvolutionaryTrace:P10408
Genevestigator:P10408 Uniprot:P10408
Length = 901
Score = 928 (331.7 bits), Expect = 2.2e-123, Sum P(3) = 2.2e-123
Identities = 213/442 (48%), Positives = 283/442 (64%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ++GG VL++ IAEM+TGEGKTL +TL AYLNALTG+GVHVVTVNDYLAQRDA
Sbjct: 81 MRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
E + FLGL+VG+ GM +R Y DITY N+E GFDYLRDN+A + E+ V
Sbjct: 141 ENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQ 200
Query: 121 R-----WPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARY-PVAA---KVAELLVQ 171
R ++DE + LI G P S E K V + P K Q
Sbjct: 201 RKLHYALVDEVDSILIDEARTPLIISG--PAEDSSEMYKRVNKIIPHLIRQEKEDSETFQ 258
Query: 172 GL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----PWARFVMN----ALKAKE 222
G H++V+ K+ V LTE G+ L E L + DE + P +M+ AL+A
Sbjct: 259 GEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHA 318
Query: 223 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 282
+ RDV YIV++G+ +I++E TGR + RRWS+G+HQAVEAKEG++IQ ++ +A IT+Q
Sbjct: 319 LFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQ 378
Query: 283 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 342
+ F+LY KL+GMTGTA TE EF ++++ + VPTN P IR DLP + T K +
Sbjct: 379 NYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAI 438
Query: 343 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 402
++++ G+PVLVG+ S+E SE +S+ L + GI HNVLNA K+ A EA VAQAG
Sbjct: 439 IEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNA--KFHANEAAIVAQAGY 496
Query: 403 KYAITISTNMAGRGTDIILGGN 424
A+TI+TNMAGRGTDI+LGG+
Sbjct: 497 PAAVTIATNMAGRGTDIVLGGS 518
Score = 248 (92.4 bits), Expect = 2.2e-123, Sum P(3) = 2.2e-123
Identities = 58/163 (35%), Positives = 86/163 (52%)
Query: 554 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 613
V GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D
Sbjct: 548 VLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDR--VSG 605
Query: 614 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 673
++ ++ IE + + + Q E F IRK L+E+D+V QR+ +Y R
Sbjct: 606 MMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNE 665
Query: 674 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 716
+L ++ S+ I + V I + P W + L
Sbjct: 666 LLDVSD--VSETINSIREDVFKATIDAYIPPQSLEEMWDIPGL 706
Score = 72 (30.4 bits), Expect = 2.2e-123, Sum P(3) = 2.2e-123
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 808 LGDILIASYLNVVQESRYDDVY----MKEVERAVLVKTLDCFWRDHLINMNRLSSAVY 861
L + ++A + V Q R ++V M+ E+ V+++TLD W++HL M+ L ++
Sbjct: 735 LRERILAQSIEVYQ--RKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIH 790
>TIGR_CMR|SO_4211 [details] [associations]
symbol:SO_4211 "preprotein translocase, SecA subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:NP_719739.1
ProteinModelPortal:Q8E9Q5 SMR:Q8E9Q5 PRIDE:Q8E9Q5 GeneID:1171815
KEGG:son:SO_4211 PATRIC:23528060 ProtClustDB:PRK13107
Uniprot:Q8E9Q5
Length = 908
Score = 893 (319.4 bits), Expect = 1.1e-121, Sum P(3) = 1.1e-121
Identities = 203/445 (45%), Positives = 278/445 (62%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ++GG VL IAEM+TGEGKTL +TL AYLNALTG+GVHV+TVNDYLA+RDA
Sbjct: 81 MRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALTGKGVHVITVNDYLARRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
E + FLGL+VG+ G+ ++++ Y DITY N+E GFDYLRDN+A + ++ V
Sbjct: 141 ENNRPLFEFLGLTVGINVAGLGQQDKKDAYNADITYGTNNEFGFDYLRDNMAFSPQERVQ 200
Query: 121 R-----WPKPFHFAIVDEVDSVLIDEGR----NPLLIS-GEASKDVARYPVAAKVAELLV 170
R ++DE + LI G + L I ++ R E +
Sbjct: 201 RPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTLIPNLIRQDKEDS-EEYVG 259
Query: 171 QGLHYTVELKNNSVELTEEGIALAE-------MALETNDLWDE-NDPWARFVMNALKAKE 222
+G YT++ K V TE G E M E + L+ N V AL+A
Sbjct: 260 EG-DYTIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSLYSAANISLLHHVNAALRAHT 318
Query: 223 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 282
+ RDV YIV++G+ +I++E TGR RRWSEG+HQAVEAKEG++IQ ++ +A IT+Q
Sbjct: 319 LFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVEAKEGVRIQNENQTLASITFQ 378
Query: 283 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 342
+ F+LY KL+GMTGTA TE EF ++ + + VPTN P +R D+ + TA K++
Sbjct: 379 NYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPMVRKDMADLVYLTANEKYQAI 438
Query: 343 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 402
++++ G+PVLVG+ S+E SE L+ L+ ++ IPH VLNA K+ +EAE VAQAGR
Sbjct: 439 IKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQVLNA--KFHEKEAEIVAQAGR 496
Query: 403 KYAITISTNMAGRGTDIILGGNPKM 427
A+TI+TNMAGRGTDI+LGGN M
Sbjct: 497 TGAVTIATNMAGRGTDIVLGGNWNM 521
Score = 265 (98.3 bits), Expect = 1.1e-121, Sum P(3) = 1.1e-121
Identities = 61/159 (38%), Positives = 87/159 (54%)
Query: 558 GGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVDLISR 617
GGLH++GT HESRRIDNQLRGRAGRQGD GS+RF +S++D + + F+ D ++ +
Sbjct: 552 GGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMEDSLMRIFASDR--VSGMMKK 609
Query: 618 ITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQSILTG 677
+ +E IE + R + Q E F IRK L+EFD+V QR+ VY R ++
Sbjct: 610 LGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVANDQRQVVYAQRNELMDA 669
Query: 678 ANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKL 716
ES + I V+ +I + P W + L
Sbjct: 670 --ESIADTIQNIQDDVISAVIDQYIPPQSVEELWDVPGL 706
Score = 74 (31.1 bits), Expect = 1.1e-121, Sum P(3) = 1.1e-121
Identities = 11/32 (34%), Positives = 23/32 (71%)
Query: 830 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVY 861
+++ E+AV+++TLD W++HL M+ L ++
Sbjct: 759 LRQFEKAVMLQTLDGLWKEHLAAMDHLRQGIH 790
>TIGR_CMR|CPS_4454 [details] [associations]
symbol:CPS_4454 "preprotein translocase, SecA subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:YP_271102.1
ProteinModelPortal:Q47VS0 SMR:Q47VS0 STRING:Q47VS0 GeneID:3522474
KEGG:cps:CPS_4454 PATRIC:21471745
BioCyc:CPSY167879:GI48-4463-MONOMER Uniprot:Q47VS0
Length = 893
Score = 897 (320.8 bits), Expect = 3.5e-121, Sum P(3) = 3.5e-121
Identities = 200/442 (45%), Positives = 282/442 (63%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VL++G IAEM+TGEGKTL +TL +YLNALT +GVHV+TVNDYLA RDA
Sbjct: 81 MRHFDVQMIGGMVLNEGKIAEMRTGEGKTLTATLPSYLNALTDKGVHVITVNDYLATRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQ--- 117
+W + FLGL+VG GM +++++ Y+ DITY N+E GFDYLRDN+ + ++
Sbjct: 141 DWSRPLFEFLGLTVGCNVAGMTTQDKQAAYQSDITYGTNNEFGFDYLRDNMVFSPQERSQ 200
Query: 118 --LVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDV-ARYPVAAKVAELLVQGLH 174
L ++DE + LI G+ S K + P + E +G
Sbjct: 201 KPLHFAIIDEVDSILIDEARTPLIISGQAE--DSSALYKIINTLVPTLEQQEEEDKEGEE 258
Query: 175 ----YTVELKNNSVELTEEG-IALAEMALET------NDLWDE-NDPWARFVMNALKAKE 222
+T++ K V LTE G I + E+ +E + L+ N VM AL+A +
Sbjct: 259 STGDFTIDEKAKQVYLTERGQIHIEEIMVEKELLTAGDTLFSAANITLLHHVMAALRAHK 318
Query: 223 FYRRDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQ 282
+++DV YIV++ + +I++E TGR E RRWSEG+HQAVEAKEG+ IQ ++ +A IT+Q
Sbjct: 319 LFQKDVDYIVKDDEIVIVDEHTGRTMEGRRWSEGLHQAVEAKEGVNIQNENQTLASITFQ 378
Query: 283 SLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYA 342
+ F++Y KLSGMTGTA TE EF ++ + + +PTN P +R DL + T K+E
Sbjct: 379 NYFRIYEKLSGMTGTADTEAFEFNHIYGLETVIIPTNQPMVRKDLSDLIYLTTEEKFEAI 438
Query: 343 RQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGR 402
+++ + G+PVLVG+ ++E SE+LSD LK+ I H VLNA K+ +EAE VA AG+
Sbjct: 439 LADIQDCVKRGQPVLVGTIAIETSEFLSDFLKKAKIKHKVLNA--KFHQQEAEIVADAGK 496
Query: 403 KYAITISTNMAGRGTDIILGGN 424
+ A+TI+TNMAGRGTDI+LGGN
Sbjct: 497 ENAVTIATNMAGRGTDIVLGGN 518
Score = 261 (96.9 bits), Expect = 3.5e-121, Sum P(3) = 3.5e-121
Identities = 63/164 (38%), Positives = 99/164 (60%)
Query: 554 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAVD 613
V LGGLH++ T HESRRIDNQLRGR+GRQGD GSTRF +S++D + + F+ + +
Sbjct: 548 VLELGGLHIVATERHESRRIDNQLRGRSGRQGDEGSTRFYLSMEDSLMRIFASER--ISN 605
Query: 614 LISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQS 673
++ ++ ++ IE + R + Q E F +RK L+E+D+V QR +Y+ R
Sbjct: 606 MMRKLGMEKGEAIEHPWVTRSIENAQRKVEGRNFDMRKQLLEYDDVANDQRGVIYEQRNE 665
Query: 674 ILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKH-PRYWSLDKL 716
+L NE +I ++A+ ++I G +D +H PR SLD++
Sbjct: 666 LLD--NE----EIGSVVEAIRSDVINGVID--QHIPRQ-SLDEM 700
Score = 69 (29.3 bits), Expect = 3.5e-121, Sum P(3) = 3.5e-121
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 827 DVYMKEVERAVLVKTLDCFWRDHLINMNRLSSAV 860
DV +++ E+AV++++LD W++HL M+ L +
Sbjct: 757 DV-LRQFEKAVMLQSLDSHWKEHLSAMDHLRQGI 789
>UNIPROTKB|Q3S2Y3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1311 "Streptococcus agalactiae" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ174691 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 PROSITE:PS51196 IntAct:Q3S2Y3 TIGRFAMs:TIGR03714
Uniprot:Q3S2Y3
Length = 798
Score = 836 (299.3 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 181/425 (42%), Positives = 263/425 (61%)
Query: 4 FDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWM 63
+D Q++G LH G+IAEMKTGEGKTL +T+ YLNALT +G +VT NDYLA+RDA M
Sbjct: 84 YDAQVMGAIALHQGTIAEMKTGEGKTLTATMPLYLNALTSKGAILVTTNDYLAKRDALEM 143
Query: 64 ERVHRFLGLSVGLIQRGMIPEE----RRSNYRCDITYTNNSELGFDYLRDNLAANSEQLV 119
+V++FLG++VG+ E +R Y DITYT LGFDYL NLA+N +
Sbjct: 144 GKVYQFLGMTVGINVFDKKEEADATIKREVYESDITYTTAGALGFDYLVHNLASNKLEQF 203
Query: 120 MRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYTVEL 179
+R PFHF IVDE DSVL+D + PL+I+G+ Y + L + Y +
Sbjct: 204 LR---PFHFVIVDEADSVLLDIAQTPLIIAGDPRVQSNLYGITNNFVLTLKENDEYIHKA 260
Query: 180 KNNSVELTEEGIALAEMALETNDLWDENDPWA--RFVMNALKAKEFYRRDVQYIVRNGKA 237
K+ V LTE+G++ A+ ++L+++ + W R + AL+A Y+RD Y+V+N +
Sbjct: 261 KDKIVYLTEKGVSYAKQYFNISELYND-EYWELNRHINLALRAHCLYKRDYDYVVKNNEV 319
Query: 238 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 297
+++ TGRV E + GIHQA+EAKE + + +S +A ITYQSLF ++P+LSGMTGT
Sbjct: 320 KLLDNATGRVMEGTKLQSGIHQAIEAKEDVALTNESRAIASITYQSLFNMFPRLSGMTGT 379
Query: 298 AKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVL 357
K+ E E +K + +PVI +PTN P RVDL + + + K + +V+ G+PVL
Sbjct: 380 GKSSEDELIKTYHLPVIVIPTNFPIKRVDLADKIYVSLPEKLQATIDDVKQRHSKGQPVL 439
Query: 358 VGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGRGT 417
+ S +VE + S LL ++GI HN L A +EA+ + +AG+K ++T +T +AGRGT
Sbjct: 440 LISGTVEIANIYSKLLLREGIAHNTLTA--DNVVKEAQIIKEAGQKGSVTCATVLAGRGT 497
Query: 418 DIILG 422
DI LG
Sbjct: 498 DIKLG 502
Score = 200 (75.5 bits), Expect = 1.5e-102, Sum P(2) = 1.5e-102
Identities = 57/202 (28%), Positives = 101/202 (50%)
Query: 551 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSW 610
G V+ LGGL VIGT + R+D QLRGR+GRQGDPG ++F VSL+DE+ S W
Sbjct: 502 GEGVRELGGLAVIGTERMPNLRMDWQLRGRSGRQGDPGISQFYVSLEDELI--VSHSPEW 559
Query: 611 AVDLISRITNDED-----MPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRK 665
+ + + + E +P + + + Q+ +E R+ ++F E L +QR+
Sbjct: 560 VIKYLKKYSRKETSNYYMVPRKKRFFYQIVKNAQLRSEDKGVSSREQTIKFGESLRIQRE 619
Query: 666 HVYDLRQSILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSLDKLLKEFIAIAG 725
++Y LR ++ ++ + + +Q ++I + D +H SL + + E +
Sbjct: 620 NIYQLRNELIADSS-IVVDGVIKIIQDNFNDIA-NDKDLTEH----SLRRYILENLTYKF 673
Query: 726 KILDDLFAGISGDTLLKSIEEL 747
K D F + D + K + ++
Sbjct: 674 KYFPDEFDVHNSDDVFKLLIDI 695
>UNIPROTKB|Q7WUF6 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1318 "Streptococcus parasanguinis" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ990875 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
TIGRFAMs:TIGR03714 EMBL:AY338765 IntAct:Q7WUF6 Uniprot:Q7WUF6
Length = 798
Score = 802 (287.4 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 182/427 (42%), Positives = 258/427 (60%)
Query: 4 FDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWM 63
FDVQ++G LH+G+I EMKTGEGKTL +TL YLNAL G+G +VT NDYLA+RDA M
Sbjct: 82 FDVQVLGALALHEGTIVEMKTGEGKTLTATLPLYLNALEGKGTILVTTNDYLARRDAIDM 141
Query: 64 ERVHRFLGLSVGLIQRGMIP--EERRSN-----YRCDITYTNNSELGFDYLRDNLAANSE 116
V+RF+GL+VG+ G+ EE SN Y DI YT ++ LGFDYL DNLA N E
Sbjct: 142 GEVYRFMGLTVGV---GVFDDDEEVDSNRKKKIYSSDILYTTSTALGFDYLIDNLAGNVE 198
Query: 117 QLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQGLHYT 176
+R F++ IVDE D+VL+D + PL+I+G Y A + L + +
Sbjct: 199 DKFLR---SFNYVIVDEADAVLLDSAQTPLIIAGSPRVQSNLYDTADQFIRTLKKDQEFK 255
Query: 177 VELKNNSVELTEEGIALAEMALETNDLWDEND-PWARFVMNALKAKEFYRRDVQYIVRNG 235
+ LT+EGI AE +L+ E R + AL+A +++D+ Y+V +
Sbjct: 256 FLKDEKFIFLTDEGIRYAEKYFNIPNLYSEEYFELNRHINLALRAHYLFKKDMDYVVTDD 315
Query: 236 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 295
+++ TGR+ E R GIHQA+E KE +K DS +A +TYQSLF ++PKLSGMT
Sbjct: 316 AVELLDNRTGRILEGTRLQSGIHQAIETKEKVKKSKDSRAIASVTYQSLFNMFPKLSGMT 375
Query: 296 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 355
GT K E E + + + V+ +PTN P R+D + + T K + V+ + +P
Sbjct: 376 GTGKIAENELISTYGVSVVVLPTNTPIQRLDYSDKIYTTLPEKLLATLEFVKELHEKQQP 435
Query: 356 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 415
+L+ S +V+ +E S +L Q+GIPHNVL A K A+EA +A+AG+K A+T++T++AGR
Sbjct: 436 ILLISGTVDIAEIYSRMLLQEGIPHNVLTA--KNIAKEALIIAEAGQKGAVTVATSLAGR 493
Query: 416 GTDIILG 422
GTDI LG
Sbjct: 494 GTDIKLG 500
Score = 189 (71.6 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 49/134 (36%), Positives = 71/134 (52%)
Query: 551 GSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFS----- 605
G V LGGL VIGT + RID QLRGRAGRQGDPG ++F VSL+D++ +
Sbjct: 500 GKGVAELGGLAVIGTERMPNSRIDWQLRGRAGRQGDPGLSQFFVSLEDDLIMNHANRRLK 559
Query: 606 --FDTSWAVDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQ 663
F+ ++D + P+ R + Q +E R++ ++FDE L+ Q
Sbjct: 560 KYFEKQNSID-----RKNYGKPLFSKRFSRIVTHAQQKSEDKSESARQNTIKFDESLKSQ 614
Query: 664 RKHVYDLRQSILTG 677
RK +Y LR ++ G
Sbjct: 615 RKKIYHLRDQLIFG 628
>UNIPROTKB|Q5LPY3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312
SMART:SM00957 SMART:SM00958 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0006605 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0017038 eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_167923.1 HSSP:P0A5Y8
ProteinModelPortal:Q5LPY3 GeneID:3194324 KEGG:sil:SPO2713
PATRIC:23378841 OMA:RASTHLT ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 787 (282.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 180/436 (41%), Positives = 252/436 (57%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAE 61
RH+ QI+G + +G++AEM+TGEGKTL TLAA AL G VHV+T NDYLA RDA+
Sbjct: 109 RHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGTAALAGRRVHVITANDYLAGRDAD 168
Query: 62 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSE--QLV 119
M ++ LGL+ ++ G PEERR+ + DI Y + E+ F +LRD +A +
Sbjct: 169 TMRGLYARLGLTCAAVEPGCTPEERRAAFAADIVYASGKEVAFTFLRDRVAMGGRAGDIG 228
Query: 120 MRWPKPF----------HFAIVDEVDSVLIDEGRNPLLIS---GEASKDVARYPVAAKVA 166
+R F FAIVDE+DSV+IDE R PL++S +A + A +A
Sbjct: 229 LRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEARTPLILSVPPADAEVEAEAARAAHAIA 288
Query: 167 ELLVQGLHYTVELKNNSVELTEEGI-ALAEMALETNDLWDENDPWARFVMNALKAKEFYR 225
L +G Y ++ ++VEL+ G LA++A W V A+ A ++
Sbjct: 289 AELKEGRDYRLDRLRHAVELSRNGCDRLADLAERMPPAWRPAPIREDAVRTAISAIRLHQ 348
Query: 226 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 285
RD YI+R+GK I++E TGR+ R WS G+HQAVEAKEG++I + V +AQIT+Q F
Sbjct: 349 RDEHYILRDGKVEIVDEFTGRIMPDRSWSAGLHQAVEAKEGVEITSRRVTLAQITFQRFF 408
Query: 286 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 345
+ Y L GMTGTA EF ++ +PV+ +PT+ + R Q A KW +
Sbjct: 409 RRYIHLGGMTGTATEAADEFWSVYDLPVVRIPTHKRSRRRTWKTQVSTRAATKWARVAKR 468
Query: 346 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 405
+++ GRPVL+G+ +V SE S L G+PH VL+A A EA VA+AGR A
Sbjct: 469 AKALSASGRPVLIGTRTVAASEAASAALHALGVPHRVLSAAQD--ADEAAVVAEAGRAGA 526
Query: 406 ITISTNMAGRGTDIIL 421
+T++TNMAGRGTDIIL
Sbjct: 527 VTVATNMAGRGTDIIL 542
Score = 183 (69.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 45/107 (42%), Positives = 60/107 (56%)
Query: 552 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 611
+E ++ GGLHVI T H SRRID QL GRAGRQGDPGST ++S +D + +F S
Sbjct: 544 AEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGRYS-- 601
Query: 612 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 658
S +T G A++ L Q AE+ + R+ L+E DE
Sbjct: 602 ----SFVTR-----FGGSAVLSALTDAQRRAERTHVAARRRLLELDE 639
Score = 51 (23.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 394 AETVAQAGRK-YAITISTNMAGRGTDIILG 422
A T A AGR+ + IT + +AGR D + G
Sbjct: 143 AGTAALAGRRVHVITANDYLAGRDADTMRG 172
Score = 43 (20.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 353 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN- 411
G +LV S ++ E L Q+ +L AR AE G+ AIT++
Sbjct: 87 GEALLVRSFALIR-ECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGT 145
Query: 412 --MAGRGTDII 420
+AGR +I
Sbjct: 146 AALAGRRVHVI 156
>TIGR_CMR|SPO_2713 [details] [associations]
symbol:SPO_2713 "SecA DEAD domain protein/helicase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_167923.1 HSSP:P0A5Y8 ProteinModelPortal:Q5LPY3
GeneID:3194324 KEGG:sil:SPO2713 PATRIC:23378841 OMA:RASTHLT
ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 787 (282.1 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 180/436 (41%), Positives = 252/436 (57%)
Query: 2 RHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAE 61
RH+ QI+G + +G++AEM+TGEGKTL TLAA AL G VHV+T NDYLA RDA+
Sbjct: 109 RHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGTAALAGRRVHVITANDYLAGRDAD 168
Query: 62 WMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSE--QLV 119
M ++ LGL+ ++ G PEERR+ + DI Y + E+ F +LRD +A +
Sbjct: 169 TMRGLYARLGLTCAAVEPGCTPEERRAAFAADIVYASGKEVAFTFLRDRVAMGGRAGDIG 228
Query: 120 MRWPKPF----------HFAIVDEVDSVLIDEGRNPLLIS---GEASKDVARYPVAAKVA 166
+R F FAIVDE+DSV+IDE R PL++S +A + A +A
Sbjct: 229 LRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEARTPLILSVPPADAEVEAEAARAAHAIA 288
Query: 167 ELLVQGLHYTVELKNNSVELTEEGI-ALAEMALETNDLWDENDPWARFVMNALKAKEFYR 225
L +G Y ++ ++VEL+ G LA++A W V A+ A ++
Sbjct: 289 AELKEGRDYRLDRLRHAVELSRNGCDRLADLAERMPPAWRPAPIREDAVRTAISAIRLHQ 348
Query: 226 RDVQYIVRNGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLF 285
RD YI+R+GK I++E TGR+ R WS G+HQAVEAKEG++I + V +AQIT+Q F
Sbjct: 349 RDEHYILRDGKVEIVDEFTGRIMPDRSWSAGLHQAVEAKEGVEITSRRVTLAQITFQRFF 408
Query: 286 KLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQE 345
+ Y L GMTGTA EF ++ +PV+ +PT+ + R Q A KW +
Sbjct: 409 RRYIHLGGMTGTATEAADEFWSVYDLPVVRIPTHKRSRRRTWKTQVSTRAATKWARVAKR 468
Query: 346 VESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYA 405
+++ GRPVL+G+ +V SE S L G+PH VL+A A EA VA+AGR A
Sbjct: 469 AKALSASGRPVLIGTRTVAASEAASAALHALGVPHRVLSAAQD--ADEAAVVAEAGRAGA 526
Query: 406 ITISTNMAGRGTDIIL 421
+T++TNMAGRGTDIIL
Sbjct: 527 VTVATNMAGRGTDIIL 542
Score = 183 (69.5 bits), Expect = 1.4e-95, Sum P(2) = 1.4e-95
Identities = 45/107 (42%), Positives = 60/107 (56%)
Query: 552 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWA 611
+E ++ GGLHVI T H SRRID QL GRAGRQGDPGST ++S +D + +F S
Sbjct: 544 AEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGRYS-- 601
Query: 612 VDLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDE 658
S +T G A++ L Q AE+ + R+ L+E DE
Sbjct: 602 ----SFVTR-----FGGSAVLSALTDAQRRAERTHVAARRRLLELDE 639
Score = 51 (23.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 394 AETVAQAGRK-YAITISTNMAGRGTDIILG 422
A T A AGR+ + IT + +AGR D + G
Sbjct: 143 AGTAALAGRRVHVITANDYLAGRDADTMRG 172
Score = 43 (20.2 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 353 GRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTN- 411
G +LV S ++ E L Q+ +L AR AE G+ AIT++
Sbjct: 87 GEALLVRSFALIR-ECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITLAAGT 145
Query: 412 --MAGRGTDII 420
+AGR +I
Sbjct: 146 AALAGRRVHVI 156
>UNIPROTKB|P66785 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0043952 "protein transport by
the Sec complex" evidence=IMP] [GO:0044119 "growth of symbiont in
host cell" evidence=IMP] [GO:0051701 "interaction with host"
evidence=TAS] [GO:0052059 "evasion or tolerance by symbiont of
host-produced reactive oxygen species" evidence=TAS] [GO:0052553
"modulation by symbiont of host immune response" evidence=IMP]
[GO:0052572 "response to host immune response" evidence=TAS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005618 GO:GO:0006605
Reactome:REACT_116125 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0044119
GO:GO:0016887 EMBL:BX842577 GO:GO:0052059 GO:GO:0052553
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 SUPFAM:SSF81886 PROSITE:PS51196
HOGENOM:HOG000218168 GO:GO:0043952 PIR:F70720 RefSeq:NP_216337.1
RefSeq:NP_336328.1 RefSeq:YP_006515221.1 ProteinModelPortal:P66785
SMR:P66785 PRIDE:P66785 EnsemblBacteria:EBMYCT00000003802
EnsemblBacteria:EBMYCT00000069126 GeneID:13316612 GeneID:885594
GeneID:923751 KEGG:mtc:MT1869 KEGG:mtu:Rv1821 KEGG:mtv:RVBD_1821
PATRIC:18125881 TubercuList:Rv1821 OMA:HRNTWRY ProtClustDB:PRK12326
InterPro:IPR026389 TIGRFAMs:TIGR04221 Uniprot:P66785
Length = 808
Score = 777 (278.6 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 179/439 (40%), Positives = 254/439 (57%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
+R FDVQ++G + G + EM TGEGKTL +AA AL G VHVVT+NDYLA+RDA
Sbjct: 118 LRPFDVQLLGALRMLAGDVIEMATGEGKTLAGAIAAAGYALAGRHVHVVTINDYLARRDA 177
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
EWM + +GL+VG I P+ERR+ Y D+TY + +E+GFD LRD L + LV
Sbjct: 178 EWMGPLLDAMGLTVGWITADSTPDERRTAYDRDVTYASVNEIGFDVLRDQLVTDVNDLVS 237
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELLVQ---GLHYTV 177
P P A++DE DSVL+DE PL+++G ++ R + VAEL+ ++
Sbjct: 238 --PNP-DVALIDEADSVLVDEALVPLVLAGTTHRETPRLEIIRLVAELVGDKDADEYFAT 294
Query: 178 ELKNNSVELTEEGIALAEMALETNDLWDENDPWARFV-MN-ALKAKEFYRRDVQYIVRNG 235
+ N +V LTE G E AL DL+ E +N AL A +RDV YIVR+
Sbjct: 295 DSDNRNVHLTEHGARKVEKALGGIDLYSEEHVGTTLTEVNVALHAHVLLQRDVHYIVRDD 354
Query: 236 KALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMT 295
+IN GR+ + +RW +G+ AVEAKEG++ V+ IT Q+L Y + GMT
Sbjct: 355 AVHLINASRGRIAQLQRWPDGLQAAVEAKEGIETTETGEVLDTITVQALINRYATVCGMT 414
Query: 296 GTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 355
GTA ++ + +Q+ V +P N PNIR D + + T K + + + + + G+P
Sbjct: 415 GTALAAGEQLRQFYQLGVSPIPPNKPNIREDEADRVYITTAAKNDGIVEHITEVHQRGQP 474
Query: 356 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 415
VLVG+ V SE L + L ++G+P VLNA K A EA +A+AG+ A+T+ST MAGR
Sbjct: 475 VLVGTRDVAESEELHERLVRRGVPAVVLNA--KNDAEEARVIAEAGKYGAVTVSTQMAGR 532
Query: 416 GTDIILGGNPKMLAKKIIE 434
GTDI LGG+ + ++ E
Sbjct: 533 GTDIRLGGSDEADHDRVAE 551
Score = 164 (62.8 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 554 VKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEM 600
V LGGLHV+GT H + R+DNQLRGRAGRQGDPGS+ F S +D++
Sbjct: 549 VAELGGLHVVGTGRHHTERLDNQLRGRAGRQGDPGSSVFFSSWEDDV 595
Score = 41 (19.5 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 830 MKEVERAVLVKTLDCFWRDHLINMNRLSSAVY 861
++ + R +++ LD W DHL + + +++
Sbjct: 693 LETICRQIMLYHLDRGWADHLAYLADIRESIH 724
>UNIPROTKB|Q9KPH4 [details] [associations]
symbol:secA "Protein translocase subunit SecA"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009306 "protein secretion" evidence=ISS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0009306 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 559 (201.8 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 121/268 (45%), Positives = 174/268 (64%)
Query: 174 HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAKEFYR 225
H+TV+ K+ V LTE G E L N + E D P V AL+A +
Sbjct: 262 HFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAHVLFE 321
Query: 226 RDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 284
++V YIV +G+ +I++E TGR RRWS+G+HQAVEAKEG+KIQ ++ +A IT+Q+
Sbjct: 322 KNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNENQTLASITFQNY 381
Query: 285 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 344
F+LY KLSGMTGTA TE EF +++ + + +PTN P +R D+P + + K+ +
Sbjct: 382 FRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVYRSEAEKFAAIIE 441
Query: 345 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 404
+++ G+PVLVG+ S+E SE LS+ LK+ GI HNVLNA K+ +EAE VA+AG+
Sbjct: 442 DIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNA--KFHEKEAEIVAEAGKPG 499
Query: 405 AITISTNMAGRGTDIILGGNPKMLAKKI 432
A+TI+TNMAGRGTDI+LGG+ + +K+
Sbjct: 500 AVTIATNMAGRGTDIVLGGSWQAKVEKL 527
Score = 501 (181.4 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 123/259 (47%), Positives = 153/259 (59%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VLH G IAEM+TGEGKTL +TLAAYLNAL G+GVH+VTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKGVHIVTVNDYLAKRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
E + FLG++VG+ M ++ Y+ DI Y N+E GFDYLRDN+A E V
Sbjct: 141 ETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFDYLRDNMAFRPEDRVQ 200
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------V 170
R F FA+VDEVDS+LIDE R PL+ISG A Y K+ LL
Sbjct: 201 R--ARF-FAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIPLLQKQDKEDSEEY 257
Query: 171 QGL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAK 221
+G H+TV+ K+ V LTE G E L N + E D P V AL+A
Sbjct: 258 RGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAH 317
Query: 222 EFYRRDVQYIVRNGKALII 240
+ ++V YIV ++I
Sbjct: 318 VLFEKNVDYIVTPDGEVVI 336
Score = 279 (103.3 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 67/172 (38%), Positives = 100/172 (58%)
Query: 553 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 612
+V + GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D A+
Sbjct: 548 QVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDRMAAL 607
Query: 613 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 672
+ S + DE IE + R + Q E F IRK L+E+D+V QRK VY+LR
Sbjct: 608 -IQSGM--DEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYELRD 664
Query: 673 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 720
+++ + S I Q + V++ ++ + P W + D+L +F
Sbjct: 665 ELMSA--DDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDF 714
Score = 79 (32.9 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 799 ATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 856
A L + L + +I + V +E M+ E++V+++TLD W++HL M+ L
Sbjct: 726 ADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHLAAMDHL 785
Query: 857 SSAVY 861
++
Sbjct: 786 RQGIH 790
Score = 44 (20.5 bits), Expect = 9.6e-45, Sum P(2) = 9.6e-45
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 320 LPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIP 379
+ ++R + ++ +A K EY R+ E +F L+ S + LS + QQ
Sbjct: 782 MDHLRQGIHLRGYAQKNPKQEYKRESFE-LFE----DLLESLKSDVITVLSKVRVQQQEE 836
Query: 380 HNVLNARPKYAAREAETVAQA 400
+ A+ + A EA AQA
Sbjct: 837 VERMEAQRRAQAEEAARHAQA 857
>TIGR_CMR|VC_2394 [details] [associations]
symbol:VC_2394 "preprotein translocase, SecA subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009306
GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 559 (201.8 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 121/268 (45%), Positives = 174/268 (64%)
Query: 174 HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAKEFYR 225
H+TV+ K+ V LTE G E L N + E D P V AL+A +
Sbjct: 262 HFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAHVLFE 321
Query: 226 RDVQYIVR-NGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSL 284
++V YIV +G+ +I++E TGR RRWS+G+HQAVEAKEG+KIQ ++ +A IT+Q+
Sbjct: 322 KNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNENQTLASITFQNY 381
Query: 285 FKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQ 344
F+LY KLSGMTGTA TE EF +++ + + +PTN P +R D+P + + K+ +
Sbjct: 382 FRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVYRSEAEKFAAIIE 441
Query: 345 EVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKY 404
+++ G+PVLVG+ S+E SE LS+ LK+ GI HNVLNA K+ +EAE VA+AG+
Sbjct: 442 DIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNA--KFHEKEAEIVAEAGKPG 499
Query: 405 AITISTNMAGRGTDIILGGNPKMLAKKI 432
A+TI+TNMAGRGTDI+LGG+ + +K+
Sbjct: 500 AVTIATNMAGRGTDIVLGGSWQAKVEKL 527
Score = 501 (181.4 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
Identities = 123/259 (47%), Positives = 153/259 (59%)
Query: 1 MRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDA 60
MRHFDVQ+IGG VLH G IAEM+TGEGKTL +TLAAYLNAL G+GVH+VTVNDYLA+RDA
Sbjct: 81 MRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKGVHIVTVNDYLAKRDA 140
Query: 61 EWMERVHRFLGLSVGLIQRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVM 120
E + FLG++VG+ M ++ Y+ DI Y N+E GFDYLRDN+A E V
Sbjct: 141 ETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFDYLRDNMAFRPEDRVQ 200
Query: 121 RWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDVARYPVAAKVAELL----------V 170
R F FA+VDEVDS+LIDE R PL+ISG A Y K+ LL
Sbjct: 201 R--ARF-FAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIPLLQKQDKEDSEEY 257
Query: 171 QGL-HYTVELKNNSVELTEEGIALAEMALETNDLWDEND----P----WARFVMNALKAK 221
+G H+TV+ K+ V LTE G E L N + E D P V AL+A
Sbjct: 258 RGDGHFTVDEKSKQVHLTETGQEFVEELLVKNGMMQEGDTLYSPANISLLHHVNAALRAH 317
Query: 222 EFYRRDVQYIVRNGKALII 240
+ ++V YIV ++I
Sbjct: 318 VLFEKNVDYIVTPDGEVVI 336
Score = 279 (103.3 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 67/172 (38%), Positives = 100/172 (58%)
Query: 553 EVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFSFDTSWAV 612
+V + GGLH+IGT HESRRIDNQLRGR+GRQGD GS+RF +S++D + + F+ D A+
Sbjct: 548 QVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDRMAAL 607
Query: 613 DLISRITNDEDMPIEGDAIVRQLLGLQISAEKYYFGIRKSLVEFDEVLEVQRKHVYDLRQ 672
+ S + DE IE + R + Q E F IRK L+E+D+V QRK VY+LR
Sbjct: 608 -IQSGM--DEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYELRD 664
Query: 673 SILTGANESCSQQIFQYMQAVVDEIIFGNVDPLKHPRYWSL----DKLLKEF 720
+++ + S I Q + V++ ++ + P W + D+L +F
Sbjct: 665 ELMSA--DDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKNDF 714
Score = 79 (32.9 bits), Expect = 6.7e-81, Sum P(3) = 6.7e-81
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 799 ATTNLLRKYLGDILIASYLNV--VQESRYDDVYMKEVERAVLVKTLDCFWRDHLINMNRL 856
A L + L + +I + V +E M+ E++V+++TLD W++HL M+ L
Sbjct: 726 ADNKLYEEALRERIIEQAVEVYKAKEQAVSPAVMRNFEKSVMLQTLDTLWKEHLAAMDHL 785
Query: 857 SSAVY 861
++
Sbjct: 786 RQGIH 790
Score = 44 (20.5 bits), Expect = 9.6e-45, Sum P(2) = 9.6e-45
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 320 LPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRPVLVGSTSVENSEYLSDLLKQQGIP 379
+ ++R + ++ +A K EY R+ E +F L+ S + LS + QQ
Sbjct: 782 MDHLRQGIHLRGYAQKNPKQEYKRESFE-LFE----DLLESLKSDVITVLSKVRVQQQEE 836
Query: 380 HNVLNARPKYAAREAETVAQA 400
+ A+ + A EA AQA
Sbjct: 837 VERMEAQRRAQAEEAARHAQA 857
>DICTYBASE|DDB_G0291406 [details] [associations]
symbol:DDB_G0291406 species:44689 "Dictyostelium
discoideum" [GO:0017038 "protein import" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 Pfam:PF00023 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS50088 SMART:SM00248 SMART:SM00957 dictyBase:DDB_G0291406
GO:GO:0005524 GO:GO:0006605 EMBL:AAFI02000177 GO:GO:0016020
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 GO:GO:0017038 eggNOG:COG0653
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
PROSITE:PS51196 RefSeq:XP_635190.1 ProteinModelPortal:Q54EQ0
EnsemblProtists:DDB0183872 GeneID:8628135 KEGG:ddi:DDB_G0291406
InParanoid:Q54EQ0 Uniprot:Q54EQ0
Length = 4135
Score = 237 (88.5 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 55/186 (29%), Positives = 98/186 (52%)
Query: 238 LIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGT 297
++ + TGR+ R+S+G+H+ +E K G + +S+ A I++ S F Y + G+TGT
Sbjct: 3667 IVDKDNTGRLMNGSRYSDGLHEFIEVKHGFQPNPESLTAAAISHPSFFAQYNVVFGLTGT 3726
Query: 298 A--KTEEKEFLKMFQMPVIEVPTNLPNIRVDLPIQSFATARGKWEYARQEVESMFRLGRP 355
+E E ++ + VP+ P+ R+ P + ++T + E++ M L RP
Sbjct: 3727 CGEDSERSELSLVYDVDSFNVPSYQPSKRIKKPSKIYSTIQDYQNSIIDEIKEMQSLSRP 3786
Query: 356 VLVGSTSVENSEYLSDLLKQQGIPHNVLNARPKYAAREAETVAQAGRKYAITISTNMAGR 415
+L+ ++ +SE + LL+ I +LN + E + +AG +T++TN AGR
Sbjct: 3787 ILLLVPTINDSEEFTQLLQSNSIKSQLLNEMQQQD--EEFIITKAGECGVVTVATNTAGR 3844
Query: 416 GTDIIL 421
GTDI L
Sbjct: 3845 GTDIKL 3850
Score = 160 (61.4 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 52/161 (32%), Positives = 79/161 (49%)
Query: 17 GSIAEMKTGEGK-TLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMERVHRFLGLSVG 75
G IA++ TGEGK T+V+ LA+Y A+ G + ++T ++YLAQRD E + LG+S
Sbjct: 3395 GRIAQVLTGEGKSTIVALLASYC-AILGRTIDIITTSEYLAQRDFIKFEGFFKSLGISCS 3453
Query: 76 LI-QRGMIPEERRSNYRCDITYTNNSELGFDYLRDNLAANSEQLVMR--WPKPFHFAIVD 132
I + P+ + I + N+ F L D L N +L+ P+ IVD
Sbjct: 3454 HICYQHPTPQV----FNAQILFGTNTNFEFALLGDKL--NDSKLLFTNGLPREKDLVIVD 3507
Query: 133 EVDSVLIDEGRNP--LLISGEASKDVARYPVAAKVAELLVQ 171
EVDS+ +D N + IS P++ V +VQ
Sbjct: 3508 EVDSLFMDSALNSARMAISSNDYHGFIYQPISNYVKTTIVQ 3548
Score = 80 (33.2 bits), Expect = 1.8e-28, Sum P(3) = 1.8e-28
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 552 SEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMV 594
+E GGLHVI + R++ Q GR+GRQG GS R +V
Sbjct: 3852 AEALENGGLHVIFAFYPANLRVECQGLGRSGRQGQNGSCRIIV 3894
Score = 48 (22.0 bits), Expect = 6.2e-17, Sum P(3) = 6.2e-17
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 27 GKTLVSTLAAYLNALTGEGVHVVTVNDYLAQRDAEWMERVHRFLGLSVGLIQRGMIPEER 86
G +L+S L + +++ +N + Q D+ + + + + PE +
Sbjct: 2470 GDSLISFLTIWNETSNAFSSNILPINTF-EQSDSPFDYSIESNKSRMIDFFSM-LTPETK 2527
Query: 87 RSNYRCDITYTNNSELGF 104
RSN + ++N EL F
Sbjct: 2528 RSNRWIKVVVSDNPELLF 2545
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 869 846 0.00081 122 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 628 (67 KB)
Total size of DFA: 400 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 71.71u 0.12s 71.83t Elapsed: 00:00:04
Total cpu time: 71.73u 0.12s 71.85t Elapsed: 00:00:04
Start: Tue May 21 16:29:33 2013 End: Tue May 21 16:29:37 2013